ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags29j16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY107857.1| Zea mays PCO113823 mRNA sequence 323 4e-85
2gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome... 105 2e-19
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
5gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 105 2e-19
6gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 105 2e-19
7emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003... 105 2e-19
8ref|NM_121980.2| Arabidopsis thaliana unknown protein AT5G19750 ... 50 0.010
9gb|BT001037.1| Arabidopsis thaliana At5g19750/T29J13_170 mRNA, c... 50 0.010
10gb|AY058149.1| Arabidopsis thaliana AT5g19750/T29J13_170 mRNA, c... 50 0.010
11gb|AY088454.1| Arabidopsis thaliana clone 6789 mRNA, complete se... 50 0.010
12gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome 44 0.59
13emb|CT025599.16| Mouse DNA sequence from clone RP24-254G12 on ch... 44 0.59
14gb|AC154678.2| Mus musculus BAC clone RP24-302G10 from chromosom... 42 2.3
15ref|XM_414355.1| PREDICTED: Gallus gallus similar to anion excha... 40 9.2
16gb|AC149486.1| Populus trichocarpa clone Pop1-8L22, complete seq... 40 9.2
17gb|AC149543.1| Populus trichocarpa clone Pop1-47M20, complete se... 40 9.2
18gb|AC105947.11| Mus musculus chromosome 18, clone RP24-66N1, com... 40 9.2
19gb|AC122905.3| Mus musculus BAC clone RP23-47A1 from 10, complet... 40 9.2
20emb|AL135787.13| Human DNA sequence from clone RP11-16L21 on chr... 40 9.2
21emb|AJ719425.1| Gallus gallus mRNA for hypothetical protein, clo... 40 9.2
22ref|NM_001006350.1| Gallus gallus Der1-like domain family, membe... 40 9.2
23gb|AC078906.6| Homo sapiens, clone RP11-142A23, complete sequence 40 9.2
24tpg|BK001240.1| TPA: TPA_exp: Homo sapiens growth arrest-specifi... 40 9.2
25emb|BX930511.2| Gallus gallus finished cDNA, clone ChEST619h11 40 9.2
26ref|XM_309351.2| Anopheles gambiae str. PEST ENSANGP00000015015 ... 40 9.2
27ref|XM_564195.1| Anopheles gambiae str. PEST ENSANGP00000028864 ... 40 9.2
28ref|XM_564194.1| Anopheles gambiae str. PEST ENSANGP00000028392 ... 40 9.2
29dbj|AP001376.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 9.2
30dbj|AP000742.5| Homo sapiens genomic DNA, chromosome 11 clone:CM... 40 9.2
31gb|AC124235.11| Mus musculus chromosome 13, clone RP23-273G24, c... 40 9.2
32emb|BX072579.14| Human DNA sequence from clone RP11-199F6 on chr... 40 9.2 
>gb|AY107857.1| Zea mays PCO113823 mRNA sequence
          Length = 677

 Score =  323 bits (163), Expect = 4e-85
 Identities = 292/335 (87%)
 Strand = Plus / Plus

                                                                       
Query: 72  gtggggccaacgttgcatttctggtacttgtatttgagtaaattagtgacaatcagcggg 131
           ||||||||||| || ||| ||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 18  gtggggccaactttacatgtctggtacttgtatttgagcaaattagtgacaatcagtggg 77

                                                                       
Query: 132 acatccggtgtcatttctcgcctgttacttgaccagttcatcttctctcccgttttcatt 191
            |||| |||| |||| |||||||  ||||||| |||||||| ||||||||| ||||||||
Sbjct: 78  gcatcaggtgccattgctcgccttatacttgatcagttcattttctctcccattttcatt 137

                                                                       
Query: 192 ggtgtcttcatgagcttactcgtaaccttggagggaaagccatcacttgtagtgccaaag 251
           || ||||| ||||||||||| || ||||||||||||||||| || ||||| |||||||||
Sbjct: 138 ggcgtctttatgagcttactagtcaccttggagggaaagccctctcttgtggtgccaaag 197

                                                                       
Query: 252 cttaagcaggagtggttctcttcattgatcgcgaattggcaattgtggataccgttccag 311
           ||||||||||| ||||| || ||| || | |||||||||||||| |||||||| || |||
Sbjct: 198 cttaagcaggaatggttatcatcagtgttggcgaattggcaattatggataccatttcag 257

                                                                       
Query: 312 tttttgaatttctattttgtcccacagaagctccaggttcttgccgctaattttgtagcc 371
           ||||||||||| || || || || |||||| | ||||| ||||  |||||||||||||||
Sbjct: 258 tttttgaatttttacttcgttcctcagaagtttcaggtccttggtgctaattttgtagcc 317

                                              
Query: 372 cttgcatggaacgtgattttgtcatataaagctca 406
           ||||||||||| |||||||| |||| |||||||||
Sbjct: 318 cttgcatggaatgtgattttatcatttaaagctca 352
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>gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0035B18, complete sequence
          Length = 123425

 Score =  105 bits (53), Expect = 2e-19
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                         
Query: 165   cagttcatcttctctcccgttttcattggtgtcttcatgagcttactcgtaaccttggag 224
             |||||||| ||||||||| |||||||||| || || ||||| |||||||| |||||||||
Sbjct: 51165 cagttcattttctctcccattttcattggagtgtttatgagtttactcgtcaccttggag 51106

                                                  
Query: 225   ggaaagccatcacttgtagtgccaaagcttaagcagg 261
             |||||||| || |||||||| |||||||| |||||||
Sbjct: 51105 ggaaagccttctcttgtagttccaaagctcaagcagg 51069



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                         
Query: 258   caggagtggttctcttcattgatcgcgaattggcaattgtggataccgttccagtttttg 317
             ||||||||||| || ||| |||| ||||||||||||||||||||||| || ||||| |||
Sbjct: 50859 caggagtggttatcatcagtgattgcgaattggcaattgtggataccctttcagttcttg 50800

                                 
Query: 318   aatttctattttgtcccaca 337
             ||||| || |||||||||||
Sbjct: 50799 aatttttactttgtcccaca 50780



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 59/64 (92%)
 Strand = Plus / Minus

                                                                         
Query: 343   tccaggttcttgccgctaattttgtagcccttgcatggaacgtgattttgtcatataaag 402
             ||||||||||||| |||||||||||||||||||| |||||||||||| | |||| |||||
Sbjct: 50638 tccaggttcttgctgctaattttgtagcccttgcgtggaacgtgattctatcatttaaag 50579

                 
Query: 403   ctca 406
             ||||
Sbjct: 50578 ctca 50575



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 81/94 (86%), Gaps = 1/94 (1%)
 Strand = Plus / Minus

                                                                         
Query: 4     aattgataaagtgccagnanctagacctgaagagaacatttgtgttcacgctattggggc 63
             ||||||||||||||||  | |||||  |||||||||| ||||| |||||  | ||||| |
Sbjct: 51541 aattgataaagtgcca-aagctagatttgaagagaacgtttgtattcacatttttgggac 51483

                                               
Query: 64    ttgtcctggtggggccaacgttgcatttctggta 97
             ||||||||||||||||||| |||||| |||||||
Sbjct: 51482 ttgtcctggtggggccaacattgcatgtctggta 51449



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                         
Query: 94    ggtacttgtatttgagtaaattagtgacaatcagcgggacatccggtgtcatttctcgcc 153
             |||||||||| ||||||||||||||||| ||||  ||  |||| ||||  ||| ||||||
Sbjct: 51364 ggtacttgtacttgagtaaattagtgacgatcaatggtgcatcaggtgcaattgctcgcc 51305

                       
Query: 154   tgttacttga 163
             | ||||||||
Sbjct: 51304 tcttacttga 51295
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  105 bits (53), Expect = 2e-19
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                           
Query: 165     cagttcatcttctctcccgttttcattggtgtcttcatgagcttactcgtaaccttggag 224
               |||||||| ||||||||| |||||||||| || || ||||| |||||||| |||||||||
Sbjct: 1336862 cagttcattttctctcccattttcattggagtgtttatgagtttactcgtcaccttggag 1336803

                                                    
Query: 225     ggaaagccatcacttgtagtgccaaagcttaagcagg 261
               |||||||| || |||||||| |||||||| |||||||
Sbjct: 1336802 ggaaagccttctcttgtagttccaaagctcaagcagg 1336766



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 59/64 (92%)
 Strand = Plus / Minus

                                                                           
Query: 343     tccaggttcttgccgctaattttgtagcccttgcatggaacgtgattttgtcatataaag 402
               ||||||||||||| |||||||||||||||||||| |||||||||||| | |||| |||||
Sbjct: 1336448 tccaggttcttgctgctaattttgtagcccttgcgtggaacgtgattctatcatttaaag 1336389

                   
Query: 403     ctca 406
               ||||
Sbjct: 1336388 ctca 1336385



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                           
Query: 258     caggagtggttctcttcattgatcgcgaattggcaattgtggataccgttccagtttttg 317
               ||||||||||| || ||| |||| || |||||||||||||||||||| || ||||| |||
Sbjct: 1336673 caggagtggttatcatcagtgattgcaaattggcaattgtggataccttttcagttcttg 1336614

                                   
Query: 318     aatttctattttgtcccaca 337
               ||||| || |||||||||||
Sbjct: 1336613 aatttttactttgtcccaca 1336594



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 80/94 (85%), Gaps = 1/94 (1%)
 Strand = Plus / Minus

                                                                           
Query: 4       aattgataaagtgccagnanctagacctgaagagaacatttgtgttcacgctattggggc 63
               ||||||||||||||||  | |||||  |||||||||| ||||| |||||  | ||||| |
Sbjct: 1337242 aattgataaagtgcca-aagctagatttgaagagaacgtttgtattcacatttttgggac 1337184

                                                 
Query: 64      ttgtcctggtggggccaacgttgcatttctggta 97
               | ||||||||||||||||| |||||| |||||||
Sbjct: 1337183 tcgtcctggtggggccaacattgcatgtctggta 1337150



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 94      ggtacttgtatttgagtaaattagtga 120
               |||||||||| ||||||||||||||||
Sbjct: 1337058 ggtacttgtacttgagtaaattagtga 1337032
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  105 bits (53), Expect = 2e-19
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                           
Query: 165     cagttcatcttctctcccgttttcattggtgtcttcatgagcttactcgtaaccttggag 224
               |||||||| ||||||||| |||||||||| || || ||||| |||||||| |||||||||
Sbjct: 1432370 cagttcattttctctcccattttcattggagtgtttatgagtttactcgtcaccttggag 1432311

                                                    
Query: 225     ggaaagccatcacttgtagtgccaaagcttaagcagg 261
               |||||||| || |||||||| |||||||| |||||||
Sbjct: 1432310 ggaaagccttctcttgtagttccaaagctcaagcagg 1432274



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                           
Query: 258     caggagtggttctcttcattgatcgcgaattggcaattgtggataccgttccagtttttg 317
               ||||||||||| || ||| |||| ||||||||||||||||||||||| || ||||| |||
Sbjct: 1432064 caggagtggttatcatcagtgattgcgaattggcaattgtggataccctttcagttcttg 1432005

                                   
Query: 318     aatttctattttgtcccaca 337
               ||||| || |||||||||||
Sbjct: 1432004 aatttttactttgtcccaca 1431985



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 59/64 (92%)
 Strand = Plus / Minus

                                                                           
Query: 343     tccaggttcttgccgctaattttgtagcccttgcatggaacgtgattttgtcatataaag 402
               ||||||||||||| |||||||||||||||||||| |||||||||||| | |||| |||||
Sbjct: 1431843 tccaggttcttgctgctaattttgtagcccttgcgtggaacgtgattctatcatttaaag 1431784

                   
Query: 403     ctca 406
               ||||
Sbjct: 1431783 ctca 1431780



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 81/94 (86%), Gaps = 1/94 (1%)
 Strand = Plus / Minus

                                                                           
Query: 4       aattgataaagtgccagnanctagacctgaagagaacatttgtgttcacgctattggggc 63
               ||||||||||||||||  | |||||  |||||||||| ||||| |||||  | ||||| |
Sbjct: 1432746 aattgataaagtgcca-aagctagatttgaagagaacgtttgtattcacatttttgggac 1432688

                                                 
Query: 64      ttgtcctggtggggccaacgttgcatttctggta 97
               ||||||||||||||||||| |||||| |||||||
Sbjct: 1432687 ttgtcctggtggggccaacattgcatgtctggta 1432654



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                           
Query: 94      ggtacttgtatttgagtaaattagtgacaatcagcgggacatccggtgtcatttctcgcc 153
               |||||||||| ||||||||||||||||| ||||  ||  |||| ||||  ||| ||||||
Sbjct: 1432569 ggtacttgtacttgagtaaattagtgacgatcaatggtgcatcaggtgcaattgctcgcc 1432510

                         
Query: 154     tgttacttga 163
               | ||||||||
Sbjct: 1432509 tcttacttga 1432500
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  105 bits (53), Expect = 2e-19
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                           
Query: 165     cagttcatcttctctcccgttttcattggtgtcttcatgagcttactcgtaaccttggag 224
               |||||||| ||||||||| |||||||||| || || ||||| |||||||| |||||||||
Sbjct: 1430091 cagttcattttctctcccattttcattggagtgtttatgagtttactcgtcaccttggag 1430032

                                                    
Query: 225     ggaaagccatcacttgtagtgccaaagcttaagcagg 261
               |||||||| || |||||||| |||||||| |||||||
Sbjct: 1430031 ggaaagccttctcttgtagttccaaagctcaagcagg 1429995



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                           
Query: 258     caggagtggttctcttcattgatcgcgaattggcaattgtggataccgttccagtttttg 317
               ||||||||||| || ||| |||| ||||||||||||||||||||||| || ||||| |||
Sbjct: 1429785 caggagtggttatcatcagtgattgcgaattggcaattgtggataccctttcagttcttg 1429726

                                   
Query: 318     aatttctattttgtcccaca 337
               ||||| || |||||||||||
Sbjct: 1429725 aatttttactttgtcccaca 1429706



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 59/64 (92%)
 Strand = Plus / Minus

                                                                           
Query: 343     tccaggttcttgccgctaattttgtagcccttgcatggaacgtgattttgtcatataaag 402
               ||||||||||||| |||||||||||||||||||| |||||||||||| | |||| |||||
Sbjct: 1429564 tccaggttcttgctgctaattttgtagcccttgcgtggaacgtgattctatcatttaaag 1429505

                   
Query: 403     ctca 406
               ||||
Sbjct: 1429504 ctca 1429501



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 81/94 (86%), Gaps = 1/94 (1%)
 Strand = Plus / Minus

                                                                           
Query: 4       aattgataaagtgccagnanctagacctgaagagaacatttgtgttcacgctattggggc 63
               ||||||||||||||||  | |||||  |||||||||| ||||| |||||  | ||||| |
Sbjct: 1430467 aattgataaagtgcca-aagctagatttgaagagaacgtttgtattcacatttttgggac 1430409

                                                 
Query: 64      ttgtcctggtggggccaacgttgcatttctggta 97
               ||||||||||||||||||| |||||| |||||||
Sbjct: 1430408 ttgtcctggtggggccaacattgcatgtctggta 1430375



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                           
Query: 94      ggtacttgtatttgagtaaattagtgacaatcagcgggacatccggtgtcatttctcgcc 153
               |||||||||| ||||||||||||||||| ||||  ||  |||| ||||  ||| ||||||
Sbjct: 1430290 ggtacttgtacttgagtaaattagtgacgatcaatggtgcatcaggtgcaattgctcgcc 1430231

                         
Query: 154     tgttacttga 163
               | ||||||||
Sbjct: 1430230 tcttacttga 1430221
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  105 bits (53), Expect = 2e-19
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                           
Query: 165     cagttcatcttctctcccgttttcattggtgtcttcatgagcttactcgtaaccttggag 224
               |||||||| ||||||||| |||||||||| || || ||||| |||||||| |||||||||
Sbjct: 1336862 cagttcattttctctcccattttcattggagtgtttatgagtttactcgtcaccttggag 1336803

                                                    
Query: 225     ggaaagccatcacttgtagtgccaaagcttaagcagg 261
               |||||||| || |||||||| |||||||| |||||||
Sbjct: 1336802 ggaaagccttctcttgtagttccaaagctcaagcagg 1336766



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 59/64 (92%)
 Strand = Plus / Minus

                                                                           
Query: 343     tccaggttcttgccgctaattttgtagcccttgcatggaacgtgattttgtcatataaag 402
               ||||||||||||| |||||||||||||||||||| |||||||||||| | |||| |||||
Sbjct: 1336448 tccaggttcttgctgctaattttgtagcccttgcgtggaacgtgattctatcatttaaag 1336389

                   
Query: 403     ctca 406
               ||||
Sbjct: 1336388 ctca 1336385



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                           
Query: 258     caggagtggttctcttcattgatcgcgaattggcaattgtggataccgttccagtttttg 317
               ||||||||||| || ||| |||| || |||||||||||||||||||| || ||||| |||
Sbjct: 1336673 caggagtggttatcatcagtgattgcaaattggcaattgtggataccttttcagttcttg 1336614

                                   
Query: 318     aatttctattttgtcccaca 337
               ||||| || |||||||||||
Sbjct: 1336613 aatttttactttgtcccaca 1336594



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 80/94 (85%), Gaps = 1/94 (1%)
 Strand = Plus / Minus

                                                                           
Query: 4       aattgataaagtgccagnanctagacctgaagagaacatttgtgttcacgctattggggc 63
               ||||||||||||||||  | |||||  |||||||||| ||||| |||||  | ||||| |
Sbjct: 1337242 aattgataaagtgcca-aagctagatttgaagagaacgtttgtattcacatttttgggac 1337184

                                                 
Query: 64      ttgtcctggtggggccaacgttgcatttctggta 97
               | ||||||||||||||||| |||||| |||||||
Sbjct: 1337183 tcgtcctggtggggccaacattgcatgtctggta 1337150



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 94      ggtacttgtatttgagtaaattagtga 120
               |||||||||| ||||||||||||||||
Sbjct: 1337058 ggtacttgtacttgagtaaattagtga 1337032
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>emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 157453

 Score =  105 bits (53), Expect = 2e-19
 Identities = 86/97 (88%)
 Strand = Plus / Plus

                                                                         
Query: 165   cagttcatcttctctcccgttttcattggtgtcttcatgagcttactcgtaaccttggag 224
             |||||||| ||||||||| |||||||||| || || ||||| |||||||| |||||||||
Sbjct: 92307 cagttcattttctctcccattttcattggagtgtttatgagtttactcgtcaccttggag 92366

                                                  
Query: 225   ggaaagccatcacttgtagtgccaaagcttaagcagg 261
             |||||||| || |||||||| |||||||| |||||||
Sbjct: 92367 ggaaagccttctcttgtagttccaaagctcaagcagg 92403



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 59/64 (92%)
 Strand = Plus / Plus

                                                                         
Query: 343   tccaggttcttgccgctaattttgtagcccttgcatggaacgtgattttgtcatataaag 402
             ||||||||||||| |||||||||||||||||||| |||||||||||| | |||| |||||
Sbjct: 92721 tccaggttcttgctgctaattttgtagcccttgcgtggaacgtgattctatcatttaaag 92780

                 
Query: 403   ctca 406
             ||||
Sbjct: 92781 ctca 92784



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                         
Query: 258   caggagtggttctcttcattgatcgcgaattggcaattgtggataccgttccagtttttg 317
             ||||||||||| || ||| |||| || |||||||||||||||||||| || ||||| |||
Sbjct: 92496 caggagtggttatcatcagtgattgcaaattggcaattgtggataccttttcagttcttg 92555

                                 
Query: 318   aatttctattttgtcccaca 337
             ||||| || |||||||||||
Sbjct: 92556 aatttttactttgtcccaca 92575



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 80/94 (85%), Gaps = 1/94 (1%)
 Strand = Plus / Plus

                                                                         
Query: 4     aattgataaagtgccagnanctagacctgaagagaacatttgtgttcacgctattggggc 63
             ||||||||||||||||  | |||||  |||||||||| ||||| |||||  | ||||| |
Sbjct: 91927 aattgataaagtgcca-aagctagatttgaagagaacgtttgtattcacatttttgggac 91985

                                               
Query: 64    ttgtcctggtggggccaacgttgcatttctggta 97
             | ||||||||||||||||| |||||| |||||||
Sbjct: 91986 tcgtcctggtggggccaacattgcatgtctggta 92019



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 94    ggtacttgtatttgagtaaattagtga 120
             |||||||||| ||||||||||||||||
Sbjct: 92111 ggtacttgtacttgagtaaattagtga 92137
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>ref|NM_121980.2| Arabidopsis thaliana unknown protein AT5G19750 mRNA, complete cds
          Length = 1166

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 78  ccaacgttgcatttctggtacttgtatttgagtaaattagtgaca 122
           ||||| |||||||||||||| ||||||||||| ||| | ||||||
Sbjct: 572 ccaacattgcatttctggtatttgtatttgagcaaagtggtgaca 616
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>gb|BT001037.1| Arabidopsis thaliana At5g19750/T29J13_170 mRNA, complete cds
          Length = 867

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 78  ccaacgttgcatttctggtacttgtatttgagtaaattagtgaca 122
           ||||| |||||||||||||| ||||||||||| ||| | ||||||
Sbjct: 517 ccaacattgcatttctggtatttgtatttgagcaaagtggtgaca 561
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>gb|AY058149.1| Arabidopsis thaliana AT5g19750/T29J13_170 mRNA, complete cds
          Length = 1130

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 78  ccaacgttgcatttctggtacttgtatttgagtaaattagtgaca 122
           ||||| |||||||||||||| ||||||||||| ||| | ||||||
Sbjct: 535 ccaacattgcatttctggtatttgtatttgagcaaagtggtgaca 579
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>gb|AY088454.1| Arabidopsis thaliana clone 6789 mRNA, complete sequence
          Length = 1140

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 78  ccaacgttgcatttctggtacttgtatttgagtaaattagtgaca 122
           ||||| |||||||||||||| ||||||||||| ||| | ||||||
Sbjct: 575 ccaacattgcatttctggtatttgtatttgagcaaagttgtgaca 619
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>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome
          Length = 3059876

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 240   gtagtgccaaagcttaagcagg 261
             ||||||||||||||||||||||
Sbjct: 15607 gtagtgccaaagcttaagcagg 15628
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>emb|CT025599.16| Mouse DNA sequence from clone RP24-254G12 on chromosome 14, complete
             sequence
          Length = 170436

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 313   ttttgaatttctattttgtccc 334
             ||||||||||||||||||||||
Sbjct: 64116 ttttgaatttctattttgtccc 64095
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>gb|AC154678.2| Mus musculus BAC clone RP24-302G10 from chromosome 16, complete sequence
          Length = 198982

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 238    ttgtagtgccaaagcttaagc 258
              |||||||||||||||||||||
Sbjct: 144761 ttgtagtgccaaagcttaagc 144741
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>ref|XM_414355.1| PREDICTED: Gallus gallus similar to anion exchanger SLC26A6a
            (LOC416012), mRNA
          Length = 2560

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 329  tgtcccacagaagctccagg 348
            ||||||||||||||||||||
Sbjct: 2415 tgtcccacagaagctccagg 2396
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>gb|AC149486.1| Populus trichocarpa clone Pop1-8L22, complete sequence
          Length = 66066

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 311   gtttttgaatttctattttg 330
             ||||||||||||||||||||
Sbjct: 58729 gtttttgaatttctattttg 58748
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>gb|AC149543.1| Populus trichocarpa clone Pop1-47M20, complete sequence
          Length = 68256

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 311   gtttttgaatttctattttg 330
             ||||||||||||||||||||
Sbjct: 34412 gtttttgaatttctattttg 34431
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>gb|AC105947.11| Mus musculus chromosome 18, clone RP24-66N1, complete sequence
          Length = 207139

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 376   catggaacgtgattttgtca 395
             ||||||||||||||||||||
Sbjct: 21498 catggaacgtgattttgtca 21479
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>gb|AC122905.3| Mus musculus BAC clone RP23-47A1 from 10, complete sequence
          Length = 152690

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 305   gttccagtttttgaatttctattt 328
             |||||||||||| |||||||||||
Sbjct: 36945 gttccagtttttaaatttctattt 36922
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>emb|AL135787.13| Human DNA sequence from clone RP11-16L21 on chromosome 9 Contains the 3'
              end of a variant of the gene for  KIAA1962 protein similar
              to zinc finger protein HIT-10, the LTB4DH gene for
              leukotriene B4 12-hydroxydehydrogenase (MGC34943), the gene
              for KIAA0563-related gene (LOC286331), the GNG10 gene for
              guanine nucleotide binding protein (G protein), gamma 10, a
              novel gene, the 3' end of a novel gene and six CpG islands,
              complete sequence
          Length = 161448

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 583    agtgtccatcttttttgttg 602
              ||||||||||||||||||||
Sbjct: 150058 agtgtccatcttttttgttg 150039
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>emb|AJ719425.1| Gallus gallus mRNA for hypothetical protein, clone 2c17
          Length = 3403

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 142  tcatttctcgcctgttacttgacc 165
            ||||||||||| ||||||||||||
Sbjct: 3221 tcatttctcgcttgttacttgacc 3244
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>ref|NM_001006350.1| Gallus gallus Der1-like domain family, member 1 (DERL1), mRNA
          Length = 3403

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 142  tcatttctcgcctgttacttgacc 165
            ||||||||||| ||||||||||||
Sbjct: 3221 tcatttctcgcttgttacttgacc 3244
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>gb|AC078906.6| Homo sapiens, clone RP11-142A23, complete sequence
          Length = 156426

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 310   agtttttgaatttctatttt 329
             ||||||||||||||||||||
Sbjct: 69175 agtttttgaatttctatttt 69194
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>tpg|BK001240.1| TPA: TPA_exp: Homo sapiens growth arrest-specific 6 (GAS6) gene,
             complete cds
          Length = 45840

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 140   tgtcatttctcgcctgttac 159
             ||||||||||||||||||||
Sbjct: 19047 tgtcatttctcgcctgttac 19028
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>emb|BX930511.2| Gallus gallus finished cDNA, clone ChEST619h11
          Length = 771

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 329 tgtcccacagaagctccagg 348
           ||||||||||||||||||||
Sbjct: 608 tgtcccacagaagctccagg 589
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>ref|XM_309351.2| Anopheles gambiae str. PEST ENSANGP00000015015
           (ENSANGG00000012526), partial mRNA
          Length = 1101

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 464 acctggccggttgcaacatg 483
           ||||||||||||||||||||
Sbjct: 401 acctggccggttgcaacatg 420
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>ref|XM_564195.1| Anopheles gambiae str. PEST ENSANGP00000028864 (ENSANGG00000012526),
            mRNA
          Length = 2980

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 464  acctggccggttgcaacatg 483
            ||||||||||||||||||||
Sbjct: 1239 acctggccggttgcaacatg 1258
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>ref|XM_564194.1| Anopheles gambiae str. PEST ENSANGP00000028392 (ENSANGG00000012526),
            mRNA
          Length = 2954

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 464  acctggccggttgcaacatg 483
            ||||||||||||||||||||
Sbjct: 1213 acctggccggttgcaacatg 1232
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>dbj|AP001376.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-775E2, complete
              sequence
          Length = 181300

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 577    taaactagtgtccatctttt 596
              ||||||||||||||||||||
Sbjct: 138198 taaactagtgtccatctttt 138179
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>dbj|AP000742.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-82B15, complete
             sequence
          Length = 166543

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 577   taaactagtgtccatctttt 596
             ||||||||||||||||||||
Sbjct: 41556 taaactagtgtccatctttt 41537
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>gb|AC124235.11| Mus musculus chromosome 13, clone RP23-273G24, complete sequence
          Length = 242383

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 320   tttctattttgtcccacaga 339
             ||||||||||||||||||||
Sbjct: 42169 tttctattttgtcccacaga 42188
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>emb|BX072579.14| Human DNA sequence from clone RP11-199F6 on chromosome 13 Contains the
             GAS6 gene for growth arrest-specific 6, six novel genes
             and ten CpG islands, complete sequence
          Length = 170020

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   tgtcatttctcgcctgttac 159
             ||||||||||||||||||||
Sbjct: 78821 tgtcatttctcgcctgttac 78840


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,632,648
Number of Sequences: 3902068
Number of extensions: 5632648
Number of successful extensions: 102714
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102519
Number of HSP's gapped (non-prelim): 189
length of query: 673
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 650
effective length of database: 17,143,297,704
effective search space: 11143143507600
effective search space used: 11143143507600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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