| Clone Name | bags29i15 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY104346.1| Zea mays PCO082145 mRNA sequence Length = 1817 Score = 291 bits (147), Expect = 1e-75 Identities = 279/323 (86%) Strand = Plus / Plus Query: 15 atgggtgttggtcctgctgttgctatcccagcagcagtgaaggccgcgggtcttcaaatt 74 |||||| |||||||||| || || ||||| ||||||||||| || || || ||||| || Sbjct: 1196 atgggtattggtcctgccgtagcaatccccgcagcagtgaaagctgctggccttcagatg 1255 Query: 75 aatgatgtcgacctttttgagattaatgaggcttttgcatctcagtatgtgtactgctcc 134 ||||| |||| ||||| || || |||||||||||||||||||||||||| ||||||| | Sbjct: 1256 gatgatatcgatcttttcgaaatcaatgaggcttttgcatctcagtatgtctactgctgc 1315 Query: 135 aaaaagttggatctcgatcccgcaaaagtcaatgttaatggaggtgcaattgctcttgga 194 || |||||| | || ||||| || ||||||||||||||||| |||||||| || |||||| Sbjct: 1316 aagaagttgaaacttgatcctgctaaagtcaatgttaatggcggtgcaatggcccttgga 1375 Query: 195 catccattgggtgccacaggtgcgcgatgtgtcagcactcttctcaacgagatgaagcgc 254 ||||| |||||||| |||||||| || || ||||| ||||||||||| |||||||||||| Sbjct: 1376 catccgttgggtgctacaggtgcacggtgcgtcagtactcttctcaatgagatgaagcgc 1435 Query: 255 cgaggcaaggactgccggtttggagtaatttctatgtgcataggttctgggatgggtgca 314 || |||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 1436 cgcggcaaggattgccggttcggagtgatttctatgtgcataggttctgggatgggtgct 1495 Query: 315 gccgccgttttcgagcgtggaga 337 || || || |||||||| ||||| Sbjct: 1496 gctgctgtgttcgagcggggaga 1518
>ref|NM_196831.1| Oryza sativa (japonica cultivar-group) putative thiolase (OSJNBa0018F16.7), mRNA Length = 1778 Score = 283 bits (143), Expect = 3e-73 Identities = 296/347 (85%) Strand = Plus / Plus Query: 15 atgggtgttggtcctgctgttgctatcccagcagcagtgaaggccgcgggtcttcaaatt 74 ||||||||||||||||||||||| ||||| || |||||||| || || ||||||||||| Sbjct: 1075 atgggtgttggtcctgctgttgccatccctgcggcagtgaaagctgctggtcttcaaata 1134 Query: 75 aatgatgtcgacctttttgagattaatgaggcttttgcatctcagtatgtgtactgctcc 134 ||||||| |||||||| |||||||||||||| |||||||| ||||| || ||||||| | Sbjct: 1135 gatgatgttgaccttttcgagattaatgaggcctttgcatcacagtacgtatactgctgc 1194 Query: 135 aaaaagttggatctcgatcccgcaaaagtcaatgttaatggaggtgcaattgctcttgga 194 || ||||||| || ||||| |||||||| || ||||| ||||||||||| |||||||| Sbjct: 1195 aagaagttgggacttgatcctgcaaaagttaacgttaacggaggtgcaatggctcttggg 1254 Query: 195 catccattgggtgccacaggtgcgcgatgtgtcagcactcttctcaacgagatgaagcgc 254 |||||||||||||| |||||||| || | |||||| || ||||||||||| |||||||| Sbjct: 1255 catccattgggtgctacaggtgcacggtctgtcagtacccttctcaacgaaatgaagcga 1314 Query: 255 cgaggcaaggactgccggtttggagtaatttctatgtgcataggttctgggatgggtgca 314 || ||||| ||||| || ||||| || ||||| ||||||||||||||||| ||||| || Sbjct: 1315 cggggcaaagactgtcgatttggtgtgatttccatgtgcataggttctggcatgggggct 1374 Query: 315 gccgccgttttcgagcgtggagatgcggtggatgagctgacgaatgc 361 || || || || |||||||| ||||| ||||||||||| || ||||| Sbjct: 1375 gctgctgtctttgagcgtggggatgcagtggatgagctcactaatgc 1421
>dbj|AK072460.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121H13, full insert sequence Length = 1808 Score = 283 bits (143), Expect = 3e-73 Identities = 296/347 (85%) Strand = Plus / Plus Query: 15 atgggtgttggtcctgctgttgctatcccagcagcagtgaaggccgcgggtcttcaaatt 74 ||||||||||||||||||||||| ||||| || |||||||| || || ||||||||||| Sbjct: 1225 atgggtgttggtcctgctgttgccatccctgcggcagtgaaagctgctggtcttcaaata 1284 Query: 75 aatgatgtcgacctttttgagattaatgaggcttttgcatctcagtatgtgtactgctcc 134 ||||||| |||||||| |||||||||||||| |||||||| ||||| || ||||||| | Sbjct: 1285 gatgatgttgaccttttcgagattaatgaggcctttgcatcacagtacgtatactgctgc 1344 Query: 135 aaaaagttggatctcgatcccgcaaaagtcaatgttaatggaggtgcaattgctcttgga 194 || ||||||| || ||||| |||||||| || ||||| ||||||||||| |||||||| Sbjct: 1345 aagaagttgggacttgatcctgcaaaagttaacgttaacggaggtgcaatggctcttggg 1404 Query: 195 catccattgggtgccacaggtgcgcgatgtgtcagcactcttctcaacgagatgaagcgc 254 |||||||||||||| |||||||| || | |||||| || ||||||||||| |||||||| Sbjct: 1405 catccattgggtgctacaggtgcacggtctgtcagtacccttctcaacgaaatgaagcga 1464 Query: 255 cgaggcaaggactgccggtttggagtaatttctatgtgcataggttctgggatgggtgca 314 || ||||| ||||| || ||||| || ||||| ||||||||||||||||| ||||| || Sbjct: 1465 cggggcaaagactgtcgatttggtgtgatttccatgtgcataggttctggcatgggggct 1524 Query: 315 gccgccgttttcgagcgtggagatgcggtggatgagctgacgaatgc 361 || || || || |||||||| ||||| ||||||||||| || ||||| Sbjct: 1525 gctgctgtctttgagcgtggggatgcagtggatgagctcactaatgc 1571
>emb|X75329.1|MITHMF5 M.indica (Manila) THMF5 mRNA for 3-ketoacyl-coA thiolase B Length = 1305 Score = 125 bits (63), Expect = 2e-25 Identities = 228/283 (80%) Strand = Plus / Plus Query: 15 atgggtgttggtcctgctgttgctatcccagcagcagtgaaggccgcgggtcttcaaatt 74 ||||||||||| || ||||| || || ||||| ||||| ||||| || |||||| || || Sbjct: 1012 atgggtgttggcccagctgtggcaattccagctgcagttaaggctgctggtcttgaactt 1071 Query: 75 aatgatgtcgacctttttgagattaatgaggcttttgcatctcagtatgtgtactgctcc 134 ||||| | || |||||||| || |||||||| |||||||| || | ||| || ||| Sbjct: 1072 gatgatattgatctttttgaaataaatgaggcatttgcatcccaatttgtatattgccgt 1131 Query: 135 aaaaagttggatctcgatcccgcaaaagtcaatgttaatggaggtgcaattgctcttgga 194 || ||| ||| || ||||| | ||| |||||||||||||||||||||| || ||||| Sbjct: 1132 aacaagctgggccttgatccagaaaagatcaatgttaatggaggtgcaatggccattgga 1191 Query: 195 catccattgggtgccacaggtgcgcgatgtgtcagcactcttctcaacgagatgaagcgc 254 ||||| |||||||| |||||||| || |||||| |||||| | ||||||||||| | Sbjct: 1192 catcctttgggtgcaacaggtgcccggtgtgtcgccactctcttgcacgagatgaagagg 1251 Query: 255 cgaggcaaggactgccggtttggagtaatttctatgtgcatag 297 ||||||| |||||||| |||||||| || ||||||||||||| Sbjct: 1252 cgaggcagagactgccgctttggagtgatatctatgtgcatag 1294
>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16, complete sequence Length = 179157 Score = 101 bits (51), Expect = 2e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 15 atgggtgttggtcctgctgttgctatcccagcagcagtgaaggccgcgggtcttcaaatt 74 ||||||||||||||||||||||| ||||| || |||||||| || || ||||||||||| Sbjct: 143388 atgggtgttggtcctgctgttgccatccctgcggcagtgaaagctgctggtcttcaaata 143447 Query: 75 aatgatgtcgacctttttgagattaatgagg 105 ||||||| |||||||| ||||||||||||| Sbjct: 143448 gatgatgttgaccttttcgagattaatgagg 143478 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 103 aggcttttgcatctcagtatgtgtactgctccaaaaagttggatctcgatcccgcaaaag 162 |||| |||||||| ||||| || ||||||| ||| ||||||| || ||||| ||||||| Sbjct: 143555 aggcctttgcatcacagtacgtatactgctgcaagaagttgggacttgatcctgcaaaag 143614 Query: 163 tcaatgttaatggaggtgcaattgctcttggacatccattgggtgccacaggt 215 | || ||||| ||||||||||| |||||||| |||||||||||||| |||||| Sbjct: 143615 ttaacgttaacggaggtgcaatggctcttgggcatccattgggtgctacaggt 143667 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 211 caggtgcgcgatgtgtcagcactcttctcaacgagatgaagcgccgaggcaaggactgcc 270 ||||||| || | |||||| || ||||||||||| |||||||| || ||||| ||||| | Sbjct: 143785 caggtgcacggtctgtcagtacccttctcaacgaaatgaagcgacggggcaaagactgtc 143844 Query: 271 ggtttggagtaatttctatgtgcataggt 299 | ||||| || ||||| |||||||||||| Sbjct: 143845 gatttggtgtgatttccatgtgcataggt 143873 Score = 44.1 bits (22), Expect = 0.48 Identities = 55/66 (83%) Strand = Plus / Plus Query: 296 aggttctgggatgggtgcagccgccgttttcgagcgtggagatgcggtggatgagctgac 355 ||||||||| ||||| || || || || || |||||||| ||||| ||||||||||| || Sbjct: 143958 aggttctggcatgggggctgctgctgtctttgagcgtggggatgcagtggatgagctcac 144017 Query: 356 gaatgc 361 ||||| Sbjct: 144018 taatgc 144023
>gb|AC034258.10| Oryza sativa chromosome 10 BAC OSJNBb0011A08 genomic sequence, complete sequence Length = 117157 Score = 101 bits (51), Expect = 2e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 15 atgggtgttggtcctgctgttgctatcccagcagcagtgaaggccgcgggtcttcaaatt 74 ||||||||||||||||||||||| ||||| || |||||||| || || ||||||||||| Sbjct: 93584 atgggtgttggtcctgctgttgccatccctgcggcagtgaaagctgctggtcttcaaata 93525 Query: 75 aatgatgtcgacctttttgagattaatgagg 105 ||||||| |||||||| ||||||||||||| Sbjct: 93524 gatgatgttgaccttttcgagattaatgagg 93494 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Minus Query: 103 aggcttttgcatctcagtatgtgtactgctccaaaaagttggatctcgatcccgcaaaag 162 |||| |||||||| ||||| || ||||||| ||| ||||||| || ||||| ||||||| Sbjct: 93417 aggcctttgcatcacagtacgtatactgctgcaagaagttgggacttgatcctgcaaaag 93358 Query: 163 tcaatgttaatggaggtgcaattgctcttggacatccattgggtgccacaggt 215 | || ||||| ||||||||||| |||||||| |||||||||||||| |||||| Sbjct: 93357 ttaacgttaacggaggtgcaatggctcttgggcatccattgggtgctacaggt 93305 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 211 caggtgcgcgatgtgtcagcactcttctcaacgagatgaagcgccgaggcaaggactgcc 270 ||||||| || | |||||| || ||||||||||| |||||||| || ||||| ||||| | Sbjct: 93187 caggtgcacggtctgtcagtacccttctcaacgaaatgaagcgacggggcaaagactgtc 93128 Query: 271 ggtttggagtaatttctatgtgcataggt 299 | ||||| || ||||| |||||||||||| Sbjct: 93127 gatttggtgtgatttccatgtgcataggt 93099 Score = 44.1 bits (22), Expect = 0.48 Identities = 55/66 (83%) Strand = Plus / Minus Query: 296 aggttctgggatgggtgcagccgccgttttcgagcgtggagatgcggtggatgagctgac 355 ||||||||| ||||| || || || || || |||||||| ||||| ||||||||||| || Sbjct: 93014 aggttctggcatgggggctgctgctgtctttgagcgtggggatgcagtggatgagctcac 92955 Query: 356 gaatgc 361 ||||| Sbjct: 92954 taatgc 92949
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 101 bits (51), Expect = 2e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 15 atgggtgttggtcctgctgttgctatcccagcagcagtgaaggccgcgggtcttcaaatt 74 ||||||||||||||||||||||| ||||| || |||||||| || || ||||||||||| Sbjct: 16264499 atgggtgttggtcctgctgttgccatccctgcggcagtgaaagctgctggtcttcaaata 16264558 Query: 75 aatgatgtcgacctttttgagattaatgagg 105 ||||||| |||||||| ||||||||||||| Sbjct: 16264559 gatgatgttgaccttttcgagattaatgagg 16264589 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 103 aggcttttgcatctcagtatgtgtactgctccaaaaagttggatctcgatcccgcaaaag 162 |||| |||||||| ||||| || ||||||| ||| ||||||| || ||||| ||||||| Sbjct: 16264666 aggcctttgcatcacagtacgtatactgctgcaagaagttgggacttgatcctgcaaaag 16264725 Query: 163 tcaatgttaatggaggtgcaattgctcttggacatccattgggtgccacaggt 215 | || ||||| ||||||||||| |||||||| |||||||||||||| |||||| Sbjct: 16264726 ttaacgttaacggaggtgcaatggctcttgggcatccattgggtgctacaggt 16264778 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 211 caggtgcgcgatgtgtcagcactcttctcaacgagatgaagcgccgaggcaaggactgcc 270 ||||||| || | |||||| || ||||||||||| |||||||| || ||||| ||||| | Sbjct: 16264896 caggtgcacggtctgtcagtacccttctcaacgaaatgaagcgacggggcaaagactgtc 16264955 Query: 271 ggtttggagtaatttctatgtgcataggt 299 | ||||| || ||||| |||||||||||| Sbjct: 16264956 gatttggtgtgatttccatgtgcataggt 16264984 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 107 ttttgcatctcagtatgtgtactgctccaaaaagttggatctcgatcccgcaaaagtcaa 166 |||||| |||||||| | ||||||| ||| ||||||| || ||||| |||||||| || Sbjct: 20547033 ttttgcttctcagtacgcatactgctgcaagaagttgggacttgatcctgcaaaagttaa 20546974 Query: 167 tgttaatggaggtgcaattgctcttg 192 ||||| ||||||||||| ||||||| Sbjct: 20546973 cgttaacggaggtgcaatggctcttg 20546948 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 63 ggtcttcaaattaatgatgtcgacctttttgagattaatgagg 105 ||||||||||| ||||||| |||||||| ||||||||||||| Sbjct: 20547158 ggtcttcaaatagatgatgttgaccttttcgagattaatgagg 20547116 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 15 atgggtgttggtcctgctgttgc 37 ||||||||||||||||||||||| Sbjct: 20547195 atgggtgttggtcctgctgttgc 20547173 Score = 44.1 bits (22), Expect = 0.48 Identities = 55/66 (83%) Strand = Plus / Plus Query: 296 aggttctgggatgggtgcagccgccgttttcgagcgtggagatgcggtggatgagctgac 355 ||||||||| ||||| || || || || || |||||||| ||||| ||||||||||| || Sbjct: 16265069 aggttctggcatgggggctgctgctgtctttgagcgtggggatgcagtggatgagctcac 16265128 Query: 356 gaatgc 361 ||||| Sbjct: 16265129 taatgc 16265134
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 101 bits (51), Expect = 2e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 15 atgggtgttggtcctgctgttgctatcccagcagcagtgaaggccgcgggtcttcaaatt 74 ||||||||||||||||||||||| ||||| || |||||||| || || ||||||||||| Sbjct: 16272740 atgggtgttggtcctgctgttgccatccctgcggcagtgaaagctgctggtcttcaaata 16272799 Query: 75 aatgatgtcgacctttttgagattaatgagg 105 ||||||| |||||||| ||||||||||||| Sbjct: 16272800 gatgatgttgaccttttcgagattaatgagg 16272830 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 103 aggcttttgcatctcagtatgtgtactgctccaaaaagttggatctcgatcccgcaaaag 162 |||| |||||||| ||||| || ||||||| ||| ||||||| || ||||| ||||||| Sbjct: 16272907 aggcctttgcatcacagtacgtatactgctgcaagaagttgggacttgatcctgcaaaag 16272966 Query: 163 tcaatgttaatggaggtgcaattgctcttggacatccattgggtgccacaggt 215 | || ||||| ||||||||||| |||||||| |||||||||||||| |||||| Sbjct: 16272967 ttaacgttaacggaggtgcaatggctcttgggcatccattgggtgctacaggt 16273019 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 211 caggtgcgcgatgtgtcagcactcttctcaacgagatgaagcgccgaggcaaggactgcc 270 ||||||| || | |||||| || ||||||||||| |||||||| || ||||| ||||| | Sbjct: 16273137 caggtgcacggtctgtcagtacccttctcaacgaaatgaagcgacggggcaaagactgtc 16273196 Query: 271 ggtttggagtaatttctatgtgcataggt 299 | ||||| || ||||| |||||||||||| Sbjct: 16273197 gatttggtgtgatttccatgtgcataggt 16273225 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 107 ttttgcatctcagtatgtgtactgctccaaaaagttggatctcgatcccgcaaaagtcaa 166 |||||| |||||||| | ||||||| ||| ||||||| || ||||| |||||||| || Sbjct: 20558305 ttttgcttctcagtacgcatactgctgcaagaagttgggacttgatcctgcaaaagttaa 20558246 Query: 167 tgttaatggaggtgcaattgctcttg 192 ||||| ||||||||||| ||||||| Sbjct: 20558245 cgttaacggaggtgcaatggctcttg 20558220 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 63 ggtcttcaaattaatgatgtcgacctttttgagattaatgagg 105 ||||||||||| ||||||| |||||||| ||||||||||||| Sbjct: 20558430 ggtcttcaaatagatgatgttgaccttttcgagattaatgagg 20558388 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 15 atgggtgttggtcctgctgttgc 37 ||||||||||||||||||||||| Sbjct: 20558467 atgggtgttggtcctgctgttgc 20558445 Score = 44.1 bits (22), Expect = 0.48 Identities = 55/66 (83%) Strand = Plus / Plus Query: 296 aggttctgggatgggtgcagccgccgttttcgagcgtggagatgcggtggatgagctgac 355 ||||||||| ||||| || || || || || |||||||| ||||| ||||||||||| || Sbjct: 16273310 aggttctggcatgggggctgctgctgtctttgagcgtggggatgcagtggatgagctcac 16273369 Query: 356 gaatgc 361 ||||| Sbjct: 16273370 taatgc 16273375
>gb|AY308827.1| Helianthus annuus acetoacetyl CoA thiolase mRNA, complete cds Length = 1350 Score = 89.7 bits (45), Expect = 9e-15 Identities = 164/201 (81%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 27 cctgctgttgctatcccagcagcagtgaaggccgcgggtcttcaaattaatgatgtcgac 86 ||||||||||| || ||||| ||||| ||||| || || ||||||||| | ||| | ||| Sbjct: 1003 cctgctgttgcaattccagctgcagttaaggctgctgggcttcaaattgacgatattgac 1062 Query: 87 ctttttgagattaatgaggcttttgcatctcagtatgtgtactgctccaaaaagttggat 146 ||||| ||||| |||||||| |||||||| |||| ||| || ||| |||||| | || Sbjct: 1063 cttttcgagatcaatgaggcatttgcatcacagtttgtatattgccaaaaaaagctagaa 1122 Query: 147 ctcgatcccgcaaaag-tcaatgttaatggaggtgcaattgctcttggacatccattggg 205 |||| ||| |||||| ||||||| || ||||||||||| ||| ||||||| || ||||| Sbjct: 1123 atcga-cccacaaaagatcaatgtcaacggaggtgcaatggctattggacaccctttggg 1181 Query: 206 tgccacaggtgcgcgatgtgt 226 ||| ||||| ||||| ||||| Sbjct: 1182 tgcaacaggggcgcgttgtgt 1202
>gb|AY038061.1| Gossypium hirsutum 3-ketoacyl-CoA thiolase mRNA, complete cds Length = 640 Score = 89.7 bits (45), Expect = 9e-15 Identities = 114/137 (83%) Strand = Plus / Plus Query: 162 gtcaatgttaatggaggtgcaattgctcttggacatccattgggtgccacaggtgcgcga 221 ||||||||||||||||||||||| || ||||| ||||| ||||||| |||||||| || Sbjct: 261 gtcaatgttaatggaggtgcaatagcccttgggcatcctttgggtgttacaggtgctcgc 320 Query: 222 tgtgtcagcactcttctcaacgagatgaagcgccgaggcaaggactgccggtttggagta 281 ||||| | ||||| | ||||||||||||| || || |||||||| || |||||||| Sbjct: 321 tgtgttggaactctgttgtacgagatgaagcgtcgtgggaaggactgtcgctttggagtg 380 Query: 282 atttctatgtgcatagg 298 || || ||||||||||| Sbjct: 381 atctcaatgtgcatagg 397 Score = 73.8 bits (37), Expect = 5e-10 Identities = 82/97 (84%) Strand = Plus / Plus Query: 24 ggtcctgctgttgctatcccagcagcagtgaaggccgcgggtcttcaaattaatgatgtc 83 ||||||||||||||||| ||||| ||||| ||| | || |||||| | ||| ||||| | Sbjct: 123 ggtcctgctgttgctataccagctgcagtcaagtctgcaggtcttgagattgatgatata 182 Query: 84 gacctttttgagattaatgaggcttttgcatctcagt 120 ||| | |||||||| |||||||| ||||||||||||| Sbjct: 183 gacttgtttgagatcaatgaggcatttgcatctcagt 219
>ref|NM_124265.2| Arabidopsis thaliana PKT2 (PEROXISOMAL 3-KETO-ACYL-COA THIOLASE 2); acetyl-CoA C-acyltransferase AT5G48880 (PKT2) transcript variant AT5G48880.2 mRNA, complete cds Length = 1726 Score = 83.8 bits (42), Expect = 6e-13 Identities = 111/134 (82%) Strand = Plus / Plus Query: 93 gagattaatgaggcttttgcatctcagtatgtgtactgctccaaaaagttggatctcgat 152 ||||| |||||||| |||||||||||||||||||||| | ||| ||||| || || ||| Sbjct: 1261 gagatcaatgaggcatttgcatctcagtatgtgtactcttgcaagaagttagagctggat 1320 Query: 153 cccgcaaaagtcaatgttaatggaggtgcaattgctcttggacatccattgggtgccaca 212 | ||| ||||||||||||||||| || |||||| |||| ||||| ||||||| ||| Sbjct: 1321 atggaaaaggtcaatgttaatggaggagccattgctattggccatcccctgggtgctaca 1380 Query: 213 ggtgcgcgatgtgt 226 || || |||||||| Sbjct: 1381 ggagctcgatgtgt 1394 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 241 acgagatgaagcgccgaggcaaggactgccggtttggagtaatttctatgtgcatagg 298 ||||||||||||| |||| || || ||||| ||||||||||| || ||||||||||| Sbjct: 1409 acgagatgaagcggagaggaaaagattgccgctttggagtaatctcaatgtgcatagg 1466
>ref|NM_001036960.1| Arabidopsis thaliana PKT2 (PEROXISOMAL 3-KETO-ACYL-COA THIOLASE 2); acetyl-CoA C-acyltransferase AT5G48880 (PKT2) transcript variant AT5G48880.3 mRNA, complete cds Length = 1610 Score = 83.8 bits (42), Expect = 6e-13 Identities = 111/134 (82%) Strand = Plus / Plus Query: 93 gagattaatgaggcttttgcatctcagtatgtgtactgctccaaaaagttggatctcgat 152 ||||| |||||||| |||||||||||||||||||||| | ||| ||||| || || ||| Sbjct: 1145 gagatcaatgaggcatttgcatctcagtatgtgtactcttgcaagaagttagagctggat 1204 Query: 153 cccgcaaaagtcaatgttaatggaggtgcaattgctcttggacatccattgggtgccaca 212 | ||| ||||||||||||||||| || |||||| |||| ||||| ||||||| ||| Sbjct: 1205 atggaaaaggtcaatgttaatggaggagccattgctattggccatcccctgggtgctaca 1264 Query: 213 ggtgcgcgatgtgt 226 || || |||||||| Sbjct: 1265 ggagctcgatgtgt 1278 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 241 acgagatgaagcgccgaggcaaggactgccggtttggagtaatttctatgtgcatagg 298 ||||||||||||| |||| || || ||||| ||||||||||| || ||||||||||| Sbjct: 1293 acgagatgaagcggagaggaaaagattgccgctttggagtaatctcaatgtgcatagg 1350
>ref|NM_180826.1| Arabidopsis thaliana PKT2 (PEROXISOMAL 3-KETO-ACYL-COA THIOLASE 2); acetyl-CoA C-acyltransferase AT5G48880 (PKT2) transcript variant AT5G48880.1 mRNA, complete cds Length = 1511 Score = 83.8 bits (42), Expect = 6e-13 Identities = 111/134 (82%) Strand = Plus / Plus Query: 93 gagattaatgaggcttttgcatctcagtatgtgtactgctccaaaaagttggatctcgat 152 ||||| |||||||| |||||||||||||||||||||| | ||| ||||| || || ||| Sbjct: 1046 gagatcaatgaggcatttgcatctcagtatgtgtactcttgcaagaagttagagctggat 1105 Query: 153 cccgcaaaagtcaatgttaatggaggtgcaattgctcttggacatccattgggtgccaca 212 | ||| ||||||||||||||||| || |||||| |||| ||||| ||||||| ||| Sbjct: 1106 atggaaaaggtcaatgttaatggaggagccattgctattggccatcccctgggtgctaca 1165 Query: 213 ggtgcgcgatgtgt 226 || || |||||||| Sbjct: 1166 ggagctcgatgtgt 1179 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 241 acgagatgaagcgccgaggcaaggactgccggtttggagtaatttctatgtgcatagg 298 ||||||||||||| |||| || || ||||| ||||||||||| || ||||||||||| Sbjct: 1194 acgagatgaagcggagaggaaaagattgccgctttggagtaatctcaatgtgcatagg 1251
>gb|AY136455.1| Arabidopsis thaliana 3-keto-acyl-CoA thiolase 2 (At5g48880) mRNA, complete cds Length = 1479 Score = 83.8 bits (42), Expect = 6e-13 Identities = 111/134 (82%) Strand = Plus / Plus Query: 93 gagattaatgaggcttttgcatctcagtatgtgtactgctccaaaaagttggatctcgat 152 ||||| |||||||| |||||||||||||||||||||| | ||| ||||| || || ||| Sbjct: 1050 gagatcaatgaggcatttgcatctcagtatgtgtactcttgcaagaagttagagctggat 1109 Query: 153 cccgcaaaagtcaatgttaatggaggtgcaattgctcttggacatccattgggtgccaca 212 | ||| ||||||||||||||||| || |||||| |||| ||||| ||||||| ||| Sbjct: 1110 atggaaaaggtcaatgttaatggaggagccattgctattggccatcccctgggtgctaca 1169 Query: 213 ggtgcgcgatgtgt 226 || || |||||||| Sbjct: 1170 ggagctcgatgtgt 1183 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 241 acgagatgaagcgccgaggcaaggactgccggtttggagtaatttctatgtgcatagg 298 ||||||||||||| |||| || || ||||| ||||||||||| || ||||||||||| Sbjct: 1198 acgagatgaagcggagaggaaaagattgccgctttggagtaatctcaatgtgcatagg 1255
>gb|AY079026.1| Arabidopsis thaliana AT5g48880/K24G6_22 mRNA, complete cds Length = 1612 Score = 83.8 bits (42), Expect = 6e-13 Identities = 111/134 (82%) Strand = Plus / Plus Query: 93 gagattaatgaggcttttgcatctcagtatgtgtactgctccaaaaagttggatctcgat 152 ||||| |||||||| |||||||||||||||||||||| | ||| ||||| || || ||| Sbjct: 1147 gagatcaatgaggcatttgcatctcagtatgtgtactcttgcaagaagttagagctggat 1206 Query: 153 cccgcaaaagtcaatgttaatggaggtgcaattgctcttggacatccattgggtgccaca 212 | ||| ||||||||||||||||| || |||||| |||| ||||| ||||||| ||| Sbjct: 1207 atggaaaaggtcaatgttaatggaggagccattgctattggccatcccctgggtgctaca 1266 Query: 213 ggtgcgcgatgtgt 226 || || |||||||| Sbjct: 1267 ggagctcgatgtgt 1280 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 241 acgagatgaagcgccgaggcaaggactgccggtttggagtaatttctatgtgcatagg 298 ||||||||||||| |||| || || ||||| ||||||||||| || ||||||||||| Sbjct: 1295 acgagatgaagcggagaggaaaagattgccgctttggagtaatctcaatgtgcatagg 1352
>dbj|AK220781.1| Arabidopsis thaliana mRNA for peroxisomal-3-keto-acyl-CoA thiolase 1, partial cds, clone: RAFL22-25-I20 Length = 787 Score = 83.8 bits (42), Expect = 6e-13 Identities = 111/134 (82%) Strand = Plus / Plus Query: 93 gagattaatgaggcttttgcatctcagtatgtgtactgctccaaaaagttggatctcgat 152 ||||| |||||||| |||||||||||||||||||||| | ||| ||||| || || ||| Sbjct: 347 gagatcaatgaggcatttgcatctcagtatgtgtactcttgcaagaagttagagctggat 406 Query: 153 cccgcaaaagtcaatgttaatggaggtgcaattgctcttggacatccattgggtgccaca 212 | ||| ||||||||||||||||| || |||||| |||| ||||| ||||||| ||| Sbjct: 407 atggaaaaggtcaatgttaatggaggagccattgctattggccatcccctgggtgctaca 466 Query: 213 ggtgcgcgatgtgt 226 || || |||||||| Sbjct: 467 ggagctcgatgtgt 480 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 241 acgagatgaagcgccgaggcaaggactgccggtttggagtaatttctatgtgcatagg 298 ||||||||||||| |||| || || ||||| ||||||||||| || ||||||||||| Sbjct: 495 acgagatgaagcggagaggaaaagattgccgctttggagtaatctcaatgtgcatagg 552
>gb|BT002594.1| Arabidopsis thaliana 3-keto-acyl-CoA thiolase 2 (At5g48880) mRNA, complete cds Length = 1330 Score = 83.8 bits (42), Expect = 6e-13 Identities = 111/134 (82%) Strand = Plus / Plus Query: 93 gagattaatgaggcttttgcatctcagtatgtgtactgctccaaaaagttggatctcgat 152 ||||| |||||||| |||||||||||||||||||||| | ||| ||||| || || ||| Sbjct: 949 gagatcaatgaggcatttgcatctcagtatgtgtactcttgcaagaagttagagctggat 1008 Query: 153 cccgcaaaagtcaatgttaatggaggtgcaattgctcttggacatccattgggtgccaca 212 | ||| ||||||||||||||||| || |||||| |||| ||||| ||||||| ||| Sbjct: 1009 atggaaaaggtcaatgttaatggaggagccattgctattggccatcccctgggtgctaca 1068 Query: 213 ggtgcgcgatgtgt 226 || || |||||||| Sbjct: 1069 ggagctcgatgtgt 1082 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 241 acgagatgaagcgccgaggcaaggactgccggtttggagtaatttctatgtgcatagg 298 ||||||||||||| |||| || || ||||| ||||||||||| || ||||||||||| Sbjct: 1097 acgagatgaagcggagaggaaaagattgccgctttggagtaatctcaatgtgcatagg 1154
>gb|AF062591.1|AF062591 Arabidopsis thaliana peroxisomal 3-keto-acyl-CoA thiolase 2 precursor (PKT2) mRNA, complete cds Length = 1691 Score = 83.8 bits (42), Expect = 6e-13 Identities = 111/134 (82%) Strand = Plus / Plus Query: 93 gagattaatgaggcttttgcatctcagtatgtgtactgctccaaaaagttggatctcgat 152 ||||| |||||||| |||||||||||||||||||||| | ||| ||||| || || ||| Sbjct: 1261 gagatcaatgaggcatttgcatctcagtatgtgtactcttgcaagaagttagagctggat 1320 Query: 153 cccgcaaaagtcaatgttaatggaggtgcaattgctcttggacatccattgggtgccaca 212 | ||| ||||||||||||||||| || |||||| |||| ||||| ||||||| ||| Sbjct: 1321 atggaaaaggtcaatgttaatggaggagccattgctattggccatcccctgggtgctaca 1380 Query: 213 ggtgcgcgatgtgt 226 || || |||||||| Sbjct: 1381 ggagctcgatgtgt 1394 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 241 acgagatgaagcgccgaggcaaggactgccggtttggagtaatttctatgtgcatagg 298 ||||||||||||| |||| || || ||||| ||||||||||| || ||||||||||| Sbjct: 1409 acgagatgaagcggagaggaaaagattgccgctttggagtaatctcaatgtgcatagg 1466
>gb|AF062590.1|AF062590 Arabidopsis thaliana peroxisomal-3-keto-acyl-CoA thiolase 1 (PKT1) mRNA, complete cds Length = 1470 Score = 83.8 bits (42), Expect = 6e-13 Identities = 111/134 (82%) Strand = Plus / Plus Query: 93 gagattaatgaggcttttgcatctcagtatgtgtactgctccaaaaagttggatctcgat 152 ||||| |||||||| |||||||||||||||||||||| | ||| ||||| || || ||| Sbjct: 1042 gagatcaatgaggcatttgcatctcagtatgtgtactcttgcaagaagttagagctggat 1101 Query: 153 cccgcaaaagtcaatgttaatggaggtgcaattgctcttggacatccattgggtgccaca 212 | ||| ||||||||||||||||| || |||||| |||| ||||| ||||||| ||| Sbjct: 1102 atggaaaaggtcaatgttaatggaggagccattgctattggccatcccctgggtgctaca 1161 Query: 213 ggtgcgcgatgtgt 226 || || |||||||| Sbjct: 1162 ggagctcgatgtgt 1175 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 241 acgagatgaagcgccgaggcaaggactgccggtttggagtaatttctatgtgcatagg 298 ||||||||||||| |||| || || ||||| ||||||||||| || ||||||||||| Sbjct: 1190 acgagatgaagcggagaggaaaagattgccgctttggagtaatctcaatgtgcatagg 1247
>gb|AY383736.1| Glycine max 3-ketoacyl-CoA thiolase mRNA, complete cds Length = 1552 Score = 81.8 bits (41), Expect = 2e-12 Identities = 113/137 (82%) Strand = Plus / Plus Query: 90 tttgagattaatgaggcttttgcatctcagtatgtgtactgctccaaaaagttggatctc 149 ||||| || |||||||| |||||||| |||||||| || ||| ||| || |||| || Sbjct: 1111 tttgaaatcaatgaggcatttgcatcacagtatgtttattgcctcaagaaattgggactt 1170 Query: 150 gatcccgcaaaagtcaatgttaatggaggtgcaattgctcttggacatccattgggtgcc 209 |||||| ||| |||||||| ||||| ||||| ||||||||||||||||| ||||||| Sbjct: 1171 gatcccagaaaggtcaatgtcaatggtggtgccattgctcttggacatcctttgggtgtt 1230 Query: 210 acaggtgcgcgatgtgt 226 |||||||| || ||||| Sbjct: 1231 acaggtgcacgctgtgt 1247 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 15 atgggtgttggtcctgctgttgctatcccagcagcagtgaa 55 ||||||||||| |||||||||||||||||||| |||||||| Sbjct: 1036 atgggtgttggccctgctgttgctatcccagctgcagtgaa 1076
>dbj|D70895.1| Cucurbita cv. Kurokawa Amakuri mRNA for 3-ketoacyl-CoA thiolase, complete cds Length = 1682 Score = 71.9 bits (36), Expect = 2e-09 Identities = 153/192 (79%) Strand = Plus / Plus Query: 15 atgggtgttggtcctgctgttgctatcccagcagcagtgaaggccgcgggtcttcaaatt 74 ||||||||||| || |||||||| || ||||| || || ||||| || || ||| || | Sbjct: 1030 atgggtgttggcccggctgttgcaattccagcggctgtcaaggctgctgggcttgaactg 1089 Query: 75 aatgatgtcgacctttttgagattaatgaggcttttgcatctcagtatgtgtactgctcc 134 |||||| |||| ||||||||||| |||||||| |||||||| || | |||||| || Sbjct: 1090 aatgatatcgatctttttgagataaatgaggcatttgcatcccaatttgtgtattgtcgt 1149 Query: 135 aaaaagttggatctcgatcccgcaaaagtcaatgttaatggaggtgcaattgctcttgga 194 || ||| ||| || ||||| | ||| ||||||||||||| || |||||||| ||||| Sbjct: 1150 aacaagctggggcttgatccagaaaagatcaatgttaatggcggagcaattgccattgga 1209 Query: 195 catccattgggt 206 |||||| ||||| Sbjct: 1210 catccactgggt 1221 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 243 gagatgaagcgccgaggcaaggactgccggtttggagtaatttctatgtgcatagg 298 |||||||| ||||| ||||||||||| || |||||||| || || ||||||||||| Sbjct: 1258 gagatgaaacgccgtggcaaggactgtcgttttggagtgatatcaatgtgcatagg 1313
>gb|BT017030.1| Zea mays clone EL01N0202B07.c mRNA sequence Length = 839 Score = 67.9 bits (34), Expect = 3e-08 Identities = 151/190 (79%) Strand = Plus / Plus Query: 159 aaagtcaatgttaatggaggtgcaattgctcttggacatccattgggtgccacaggtgcg 218 ||||| ||||| |||||||| || ||||| |||||||| || ||||||| |||||||| Sbjct: 443 aaagtaaatgtaaatggaggcgcgattgcccttggacaccctctgggtgcaacaggtgcc 502 Query: 219 cgatgtgtcagcactcttctcaacgagatgaagcgccgaggcaaggactgccggtttgga 278 || ||||| |||||||| || || ||||||||||| |||| |||||| | ||||| Sbjct: 503 cggtgtgtggctactcttctaaatgaaatgaagcgccggggcagagactgcagatttggt 562 Query: 279 gtaatttctatgtgcataggttctgggatgggtgcagccgccgttttcgagcgtggagat 338 || | | ||||| || || ||||| ||||| ||||| || || |||||||| ||||| Sbjct: 563 gttgtcaccatgtgtatcggatctggaatgggggcagcagctgtgttcgagcggggagac 622 Query: 339 gcggtggatg 348 |||||||||| Sbjct: 623 gcggtggatg 632 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 atgggtgttggtcctgctgt 34 |||||||||||||||||||| Sbjct: 299 atgggtgttggtcctgctgt 318
>gb|BT018838.1| Zea mays clone EL01N0552G11.d mRNA sequence Length = 1681 Score = 67.9 bits (34), Expect = 3e-08 Identities = 151/190 (79%) Strand = Plus / Plus Query: 159 aaagtcaatgttaatggaggtgcaattgctcttggacatccattgggtgccacaggtgcg 218 ||||| ||||| |||||||| || ||||| |||||||| || ||||||| |||||||| Sbjct: 1233 aaagtaaatgtaaatggaggcgcgattgcccttggacaccctctgggtgcaacaggtgcc 1292 Query: 219 cgatgtgtcagcactcttctcaacgagatgaagcgccgaggcaaggactgccggtttgga 278 || ||||| |||||||| || || ||||||||||| |||| |||||| | ||||| Sbjct: 1293 cggtgtgtggctactcttctaaatgaaatgaagcgccggggcagagactgcagatttggt 1352 Query: 279 gtaatttctatgtgcataggttctgggatgggtgcagccgccgttttcgagcgtggagat 338 || | | ||||| || || ||||| ||||| ||||| || || |||||||| ||||| Sbjct: 1353 gttgtcaccatgtgtatcggatctggaatgggggcagcagctgtgttcgagcggggagac 1412 Query: 339 gcggtggatg 348 |||||||||| Sbjct: 1413 gcggtggatg 1422 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 atgggtgttggtcctgctgt 34 |||||||||||||||||||| Sbjct: 1089 atgggtgttggtcctgctgt 1108
>gb|AY103539.1| Zea mays PCO103478 mRNA sequence Length = 2010 Score = 67.9 bits (34), Expect = 3e-08 Identities = 151/190 (79%) Strand = Plus / Plus Query: 159 aaagtcaatgttaatggaggtgcaattgctcttggacatccattgggtgccacaggtgcg 218 ||||| ||||| |||||||| || ||||| |||||||| || ||||||| |||||||| Sbjct: 1450 aaagtaaatgtaaatggaggcgcgattgcccttggacaccctctgggtgcaacaggtgcc 1509 Query: 219 cgatgtgtcagcactcttctcaacgagatgaagcgccgaggcaaggactgccggtttgga 278 || ||||| |||||||| || || ||||||||||| |||| |||||| | ||||| Sbjct: 1510 cggtgtgtggctactcttctaaatgaaatgaagcgccggggcagagactgcagatttggt 1569 Query: 279 gtaatttctatgtgcataggttctgggatgggtgcagccgccgttttcgagcgtggagat 338 || | | ||||| || || ||||| ||||| ||||| || || |||||||| ||||| Sbjct: 1570 gttgtcaccatgtgtatcggatctggaatgggggcagcagctgtgttcgagcggggagac 1629 Query: 339 gcggtggatg 348 |||||||||| Sbjct: 1630 gcggtggatg 1639
>dbj|AB012242.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K24G6 Length = 78973 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Minus Query: 103 aggcttttgcatctcagtatgtgtactgctccaaaaagttggatctcgatcccgcaaaag 162 |||| |||||||||||||||||||||| | ||| ||||| || || ||| | ||| | Sbjct: 70065 aggcatttgcatctcagtatgtgtactcttgcaagaagttagagctggatatggaaaagg 70006 Query: 163 tcaatgttaatggaggtgcaattgctcttggacatccattgggtgccacaggt 215 |||||||||||||||| || |||||| |||| ||||| ||||||| |||||| Sbjct: 70005 tcaatgttaatggaggagccattgctattggccatcccctgggtgctacaggt 69953 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 241 acgagatgaagcgccgaggcaaggactgccggtttggagtaatttctatgtgcataggt 299 ||||||||||||| |||| || || ||||| ||||||||||| || |||||||||||| Sbjct: 69845 acgagatgaagcggagaggaaaagattgccgctttggagtaatctcaatgtgcataggt 69787
>gb|AF062589.1|AF062589 Arabidopsis thaliana 3-keto-acyl-CoA thiolase 2 (PKT2) and 3-keto-acyl-CoA-thiolase 1 (PKT1) genes, complete cds Length = 4938 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Plus Query: 103 aggcttttgcatctcagtatgtgtactgctccaaaaagttggatctcgatcccgcaaaag 162 |||| |||||||||||||||||||||| | ||| ||||| || || ||| | ||| | Sbjct: 4048 aggcatttgcatctcagtatgtgtactcttgcaagaagttagagctggatatggaaaagg 4107 Query: 163 tcaatgttaatggaggtgcaattgctcttggacatccattgggtgccacaggt 215 |||||||||||||||| || |||||| |||| ||||| ||||||| |||||| Sbjct: 4108 tcaatgttaatggaggagccattgctattggccatcccctgggtgctacaggt 4160 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 241 acgagatgaagcgccgaggcaaggactgccggtttggagtaatttctatgtgcataggt 299 ||||||||||||| |||| || || ||||| ||||||||||| || |||||||||||| Sbjct: 4268 acgagatgaagcggagaggaaaagattgccgctttggagtaatctcaatgtgcataggt 4326
>gb|BT012930.1| Lycopersicon esculentum clone 114093R, mRNA sequence Length = 1732 Score = 61.9 bits (31), Expect = 2e-06 Identities = 121/151 (80%) Strand = Plus / Plus Query: 163 tcaatgttaatggaggtgcaattgctcttggacatccattgggtgccacaggtgcgcgat 222 ||||||| |||||||||||||| || |||| ||||| |||||||| |||||||| || | Sbjct: 1273 tcaatgtcaatggaggtgcaatggccattggtcatcctttgggtgctacaggtgcacggt 1332 Query: 223 gtgtcagcactcttctcaacgagatgaagcgccgaggcaaggactgccggtttggagtaa 282 |||| || || | | |||||||||||||| || || |||||||| ||||| ||| Sbjct: 1333 gtgttgcaacgctgttgcatgagatgaagcgccgtgggaaagactgccgctttggtgtag 1392 Query: 283 tttctatgtgcataggttctgggatgggtgc 313 | || ||||||||||| |||| |||||||| Sbjct: 1393 tgtccatgtgcataggcactggaatgggtgc 1423
>gb|AC073166.7| Oryza sativa chromosome 10 BAC OSJNBb0064P21 genomic sequence, complete sequence Length = 142114 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 107 ttttgcatctcagtatgtgtactgctccaaaaagttggatctcgatcccgcaaaagtcaa 166 |||||| |||||||| | ||||||| ||| ||||||| || ||||| |||||||| || Sbjct: 52323 ttttgcttctcagtacgcatactgctgcaagaagttgggacttgatcctgcaaaagttaa 52264 Query: 167 tgttaatggaggtgcaattgctcttg 192 ||||| ||||||||||| ||||||| Sbjct: 52263 cgttaacggaggtgcaatggctcttg 52238 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 63 ggtcttcaaattaatgatgtcgacctttttgagattaatgagg 105 ||||||||||| ||||||| |||||||| ||||||||||||| Sbjct: 52448 ggtcttcaaatagatgatgttgaccttttcgagattaatgagg 52406 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 15 atgggtgttggtcctgctgttgc 37 ||||||||||||||||||||||| Sbjct: 52485 atgggtgttggtcctgctgttgc 52463
>ref|NM_128874.2| Arabidopsis thaliana PED1 (PEROXISOME DEFECTIVE 1) AT2G33150 (PED1) mRNA, complete cds Length = 1852 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 241 acgagatgaagcgccgaggcaaggactgccggtttggagtaatttctatgtgcataggtt 300 |||||||||| ||||| || || |||||||| ||||||||| | || |||||||| || Sbjct: 1350 acgagatgaaacgccgtggtaaagactgccgttttggagtagtgtcaatgtgcattggga 1409 Query: 301 ctgggatgggtgcagc 316 | |||||||||||||| Sbjct: 1410 cggggatgggtgcagc 1425 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 90 tttgagattaatgaggcttttgcatctcagt 120 |||||||| |||||||| ||||||||||||| Sbjct: 1199 tttgagatcaatgaggcatttgcatctcagt 1229
>gb|BC045119.1| Xenopus laevis acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase), mRNA (cDNA clone MGC:54026 IMAGE:5571615), complete cds Length = 1958 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 164 caatgttaatggaggtgcaattgctcttggacatcc 199 |||||||||||||||||| ||||||||||| ||||| Sbjct: 1035 caatgttaatggaggtgccattgctcttgggcatcc 1070
>gb|AF349530.1| Arabidopsis thaliana putative 3-ketoacyl-CoA thiolase (At2g33150) mRNA, complete cds Length = 1438 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 241 acgagatgaagcgccgaggcaaggactgccggtttggagtaatttctatgtgcataggtt 300 |||||||||| ||||| || || |||||||| ||||||||| | || |||||||| || Sbjct: 1223 acgagatgaaacgccgtggtaaagactgccgttttggagtagtgtcaatgtgcattggga 1282 Query: 301 ctgggatgggtgcagc 316 | |||||||||||||| Sbjct: 1283 cggggatgggtgcagc 1298 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 90 tttgagattaatgaggcttttgcatctcagt 120 |||||||| |||||||| ||||||||||||| Sbjct: 1072 tttgagatcaatgaggcatttgcatctcagt 1102
>gb|AF327529.1| Arabidopsis thaliana putative 3-ketoacyl-CoA thiolase (At2g33150) mRNA, complete cds Length = 1752 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 241 acgagatgaagcgccgaggcaaggactgccggtttggagtaatttctatgtgcataggtt 300 |||||||||| ||||| || || |||||||| ||||||||| | || |||||||| || Sbjct: 1331 acgagatgaaacgccgtggtaaagactgccgttttggagtagtgtcaatgtgcattggga 1390 Query: 301 ctgggatgggtgcagc 316 | |||||||||||||| Sbjct: 1391 cggggatgggtgcagc 1406 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 90 tttgagattaatgaggcttttgcatctcagt 120 |||||||| |||||||| ||||||||||||| Sbjct: 1180 tttgagatcaatgaggcatttgcatctcagt 1210
>gb|AY063720.1| Arabidopsis thaliana At2g33150/F25I18.11 mRNA, complete cds Length = 1389 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 241 acgagatgaagcgccgaggcaaggactgccggtttggagtaatttctatgtgcataggtt 300 |||||||||| ||||| || || |||||||| ||||||||| | || |||||||| || Sbjct: 1223 acgagatgaaacgccgtggtaaagactgccgttttggagtagtgtcaatgtgcattggga 1282 Query: 301 ctgggatgggtgcagc 316 | |||||||||||||| Sbjct: 1283 cggggatgggtgcagc 1298 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 90 tttgagattaatgaggcttttgcatctcagt 120 |||||||| |||||||| ||||||||||||| Sbjct: 1072 tttgagatcaatgaggcatttgcatctcagt 1102
>gb|AY058176.1| Arabidopsis thaliana At2g33150/F25I18.11 mRNA, complete cds Length = 1693 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 241 acgagatgaagcgccgaggcaaggactgccggtttggagtaatttctatgtgcataggtt 300 |||||||||| ||||| || || |||||||| ||||||||| | || |||||||| || Sbjct: 1286 acgagatgaaacgccgtggtaaagactgccgttttggagtagtgtcaatgtgcattggga 1345 Query: 301 ctgggatgggtgcagc 316 | |||||||||||||| Sbjct: 1346 cggggatgggtgcagc 1361 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 90 tttgagattaatgaggcttttgcatctcagt 120 |||||||| |||||||| ||||||||||||| Sbjct: 1136 tttgagatcaatgaggcatttgcatctcagt 1166
>dbj|AK222103.1| Arabidopsis thaliana mRNA for 3-ketoacyl-CoA thiolase, partial cds, clone: RAFL22-89-F24 Length = 1283 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 241 acgagatgaagcgccgaggcaaggactgccggtttggagtaatttctatgtgcataggtt 300 |||||||||| ||||| || || |||||||| ||||||||| | || |||||||| || Sbjct: 868 acgagatgaaacgccgtggtaaagactgccgttttggagtagtgtcaatgtgcattggga 927 Query: 301 ctgggatgggtgcagc 316 | |||||||||||||| Sbjct: 928 cggggatgggtgcagc 943 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 90 tttgagattaatgaggcttttgcatctcagt 120 |||||||| |||||||| ||||||||||||| Sbjct: 717 tttgagatcaatgaggcatttgcatctcagt 747
>gb|AY052702.1| Arabidopsis thaliana At2g33150/F25I18.11 mRNA, complete cds Length = 1753 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 241 acgagatgaagcgccgaggcaaggactgccggtttggagtaatttctatgtgcataggtt 300 |||||||||| ||||| || || |||||||| ||||||||| | || |||||||| || Sbjct: 1351 acgagatgaaacgccgtggtaaagactgccgttttggagtagtgtcaatgtgcattggga 1410 Query: 301 ctgggatgggtgcagc 316 | |||||||||||||| Sbjct: 1411 cggggatgggtgcagc 1426 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 90 tttgagattaatgaggcttttgcatctcagt 120 |||||||| |||||||| ||||||||||||| Sbjct: 1200 tttgagatcaatgaggcatttgcatctcagt 1230
>dbj|AB008854.1| Arabidopsis thaliana mRNA for 3-ketoacyl-CoA thiolase, complete cds Length = 1765 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 241 acgagatgaagcgccgaggcaaggactgccggtttggagtaatttctatgtgcataggtt 300 |||||||||| ||||| || || |||||||| ||||||||| | || |||||||| || Sbjct: 1331 acgagatgaaacgccgtggtaaagactgccgttttggagtagtgtcaatgtgcattggga 1390 Query: 301 ctgggatgggtgcagc 316 | |||||||||||||| Sbjct: 1391 cggggatgggtgcagc 1406 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 90 tttgagattaatgaggcttttgcatctcagt 120 |||||||| |||||||| ||||||||||||| Sbjct: 1180 tttgagatcaatgaggcatttgcatctcagt 1210
>gb|AY087543.1| Arabidopsis thaliana clone 36488 mRNA, complete sequence Length = 1581 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 241 acgagatgaagcgccgaggcaaggactgccggtttggagtaatttctatgtgcataggtt 300 |||||||||| ||||| || || |||||||| ||||||||| | || |||||||| || Sbjct: 1299 acgagatgaaacgccgtggtaaagactgccgttttggagtagtgtcaatgtgcattggga 1358 Query: 301 ctgggatgggtgcagc 316 | |||||||||||||| Sbjct: 1359 cggggatgggtgcagc 1374 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 90 tttgagattaatgaggcttttgcatctcagt 120 |||||||| |||||||| ||||||||||||| Sbjct: 1148 tttgagatcaatgaggcatttgcatctcagt 1178
>ref|NM_100351.2| Arabidopsis thaliana acetyl-CoA C-acyltransferase AT1G04710 mRNA, complete cds Length = 1588 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 75 aatgatgtcgacctttttgagattaatgaggcttttgcatctcagt 120 ||||| |||||| | ||||||||||| ||||| ||||||||||||| Sbjct: 1065 aatgacgtcgacttgtttgagattaacgaggcatttgcatctcagt 1110
>gb|AY099741.1| Arabidopsis thaliana putative acetyl-CoA acyltransferase (At1g04710) mRNA, complete cds Length = 1589 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 75 aatgatgtcgacctttttgagattaatgaggcttttgcatctcagt 120 ||||| |||||| | ||||||||||| ||||| ||||||||||||| Sbjct: 1065 aatgacgtcgacttgtttgagattaacgaggcatttgcatctcagt 1110
>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA, complete genome Length = 2516575 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 165 aatgttaatggaggtgcaattgctcttggacatccattgggtgccacaggtgcg 218 ||||| ||||| ||||| ||||| |||||||||||| | ||||| ||||||||| Sbjct: 2490833 aatgtaaatggcggtgccattgcacttggacatccacttggtgctacaggtgcg 2490780
>gb|BT003415.1| Arabidopsis thaliana putative acetyl-CoA acyltransferase (At1g04710) mRNA, complete cds Length = 1363 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 75 aatgatgtcgacctttttgagattaatgaggcttttgcatctcagt 120 ||||| |||||| | ||||||||||| ||||| ||||||||||||| Sbjct: 1033 aatgacgtcgacttgtttgagattaacgaggcatttgcatctcagt 1078
>gb|AY085052.1| Arabidopsis thaliana clone 125847 mRNA, complete sequence Length = 1538 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 75 aatgatgtcgacctttttgagattaatgaggcttttgcatctcagt 120 ||||| |||||| | ||||||||||| ||||| ||||||||||||| Sbjct: 1044 aatgacgtcgacttgtttgagattaacgaggcatttgcatctcagt 1089
>ref|XM_468412.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1579 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Plus Query: 157 caaaagtcaatgttaatggaggtgcaattgctcttggacatccattgggtgccacaggtg 216 ||||||| || || |||||||| ||||| || || |||||||| | ||||| ||||||| Sbjct: 1257 caaaagtaaacgtgaatggaggcgcaatcgccctaggacatcctcttggtgcaacaggtg 1316 Query: 217 cgcgatgtgtcagcactcttctcaacgagatgaagcgccgaggcaaggactgc 269 | || || ||| |||||||| || || ||||||||||| |||| ||||||| Sbjct: 1317 cccggtgcgtcgcaactcttctgaatgaaatgaagcgccggggcagggactgc 1369 Score = 44.1 bits (22), Expect = 0.48 Identities = 37/42 (88%) Strand = Plus / Plus Query: 15 atgggtgttggtcctgctgttgctatcccagcagcagtgaag 56 ||||||||||||||||| || || || ||||| ||||||||| Sbjct: 1115 atgggtgttggtcctgcagtagcaataccagctgcagtgaag 1156
>ref|XM_507050.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C12.17 patrial mRNA Length = 1582 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Plus Query: 157 caaaagtcaatgttaatggaggtgcaattgctcttggacatccattgggtgccacaggtg 216 ||||||| || || |||||||| ||||| || || |||||||| | ||||| ||||||| Sbjct: 1260 caaaagtaaacgtgaatggaggcgcaatcgccctaggacatcctcttggtgcaacaggtg 1319 Query: 217 cgcgatgtgtcagcactcttctcaacgagatgaagcgccgaggcaaggactgc 269 | || || ||| |||||||| || || ||||||||||| |||| ||||||| Sbjct: 1320 cccggtgcgtcgcaactcttctgaatgaaatgaagcgccggggcagggactgc 1372 Score = 44.1 bits (22), Expect = 0.48 Identities = 37/42 (88%) Strand = Plus / Plus Query: 15 atgggtgttggtcctgctgttgctatcccagcagcagtgaag 56 ||||||||||||||||| || || || ||||| ||||||||| Sbjct: 1118 atgggtgttggtcctgcagtagcaataccagctgcagtgaag 1159
>gb|AC126019.16| Medicago truncatula clone mth2-22p22, complete sequence Length = 130044 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 15 atgggtgttggtcctgctgttgctatcccagcagcagtgaa 55 |||||||||||||| ||| ||||||| ||||| |||||||| Sbjct: 94964 atgggtgttggtccagcttttgctattccagctgcagtgaa 95004
>dbj|AK061948.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-E07, full insert sequence Length = 1803 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Plus Query: 157 caaaagtcaatgttaatggaggtgcaattgctcttggacatccattgggtgccacaggtg 216 ||||||| || || |||||||| ||||| || || |||||||| | ||||| ||||||| Sbjct: 1255 caaaagtaaacgtgaatggaggcgcaatcgccctaggacatcctcttggtgcaacaggtg 1314 Query: 217 cgcgatgtgtcagcactcttctcaacgagatgaagcgccgaggcaaggactgc 269 | || || ||| |||||||| || || ||||||||||| |||| ||||||| Sbjct: 1315 cccggtgcgtcgcaactcttctgaatgaaatgaagcgccggggcagggactgc 1367 Score = 44.1 bits (22), Expect = 0.48 Identities = 37/42 (88%) Strand = Plus / Plus Query: 15 atgggtgttggtcctgctgttgctatcccagcagcagtgaag 56 ||||||||||||||||| || || || ||||| ||||||||| Sbjct: 1113 atgggtgttggtcctgcagtagcaataccagctgcagtgaag 1154
>gb|AY224469.1| Oryza sativa (japonica cultivar-group) isolate 24733 3-ketoacyl-CoA thiolase-like protein mRNA, complete cds Length = 1347 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Plus Query: 157 caaaagtcaatgttaatggaggtgcaattgctcttggacatccattgggtgccacaggtg 216 ||||||| || || |||||||| ||||| || || |||||||| | ||||| ||||||| Sbjct: 1130 caaaagtaaacgtgaatggaggcgcaatcgccctaggacatcctcttggtgcaacaggtg 1189 Query: 217 cgcgatgtgtcagcactcttctcaacgagatgaagcgccgaggcaaggactgc 269 | || || ||| |||||||| || || ||||||||||| |||| ||||||| Sbjct: 1190 cccggtgcgtcgcaactcttctgaatgaaatgaagcgccggggcagggactgc 1242 Score = 44.1 bits (22), Expect = 0.48 Identities = 37/42 (88%) Strand = Plus / Plus Query: 15 atgggtgttggtcctgctgttgctatcccagcagcagtgaag 56 ||||||||||||||||| || || || ||||| ||||||||| Sbjct: 988 atgggtgttggtcctgcagtagcaataccagctgcagtgaag 1029
>gb|AF270323.1|AF270323 Staphylococcus epidermidis strain SR1 clone step.4008e02 genomic sequence Length = 3315 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 159 aaagtcaatgttaatggaggtgcaattgctcttggacatcc 199 ||||||||||||||||| ||||| ||||| || |||||||| Sbjct: 1875 aaagtcaatgttaatggtggtgcgattgcactaggacatcc 1835
>gb|AF270092.1|AF270092 Staphylococcus epidermidis strain SR1 clone step.1048e05 genomic sequence Length = 2988 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 159 aaagtcaatgttaatggaggtgcaattgctcttggacatcc 199 ||||||||||||||||| ||||| ||||| || |||||||| Sbjct: 2673 aaagtcaatgttaatggtggtgcgattgcactaggacatcc 2713
>gb|AF269804.1|AF269804 Staphylococcus epidermidis strain SR1 clone step.1023g10 genomic sequence Length = 3309 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 159 aaagtcaatgttaatggaggtgcaattgctcttggacatcc 199 ||||||||||||||||| ||||| ||||| || |||||||| Sbjct: 3210 aaagtcaatgttaatggtggtgcgattgcactaggacatcc 3170
>gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome Length = 2616530 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 159 aaagtcaatgttaatggaggtgcaattgctcttggacatcc 199 ||||||||||||||||| ||||| ||||| || |||||||| Sbjct: 27296 aaagtcaatgttaatggtggtgcgattgcactaggacatcc 27336
>dbj|AK069768.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030K20, full insert sequence Length = 2045 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Plus Query: 157 caaaagtcaatgttaatggaggtgcaattgctcttggacatccattgggtgccacaggtg 216 ||||||| || || |||||||| ||||| || || |||||||| | ||||| ||||||| Sbjct: 1260 caaaagtaaacgtgaatggaggcgcaatcgccctaggacatcctcttggtgcaacaggtg 1319 Query: 217 cgcgatgtgtcagcactcttctcaacgagatgaagcgccgaggcaaggactgc 269 | || || ||| |||||||| || || ||||||||||| |||| ||||||| Sbjct: 1320 cccggtgcgtcgcaactcttctgaatgaaatgaagcgccggggcagggactgc 1372 Score = 44.1 bits (22), Expect = 0.48 Identities = 37/42 (88%) Strand = Plus / Plus Query: 15 atgggtgttggtcctgctgttgctatcccagcagcagtgaag 56 ||||||||||||||||| || || || ||||| ||||||||| Sbjct: 1118 atgggtgttggtcctgcagtagcaataccagctgcagtgaag 1159
>gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete genome Length = 2499279 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 159 aaagtcaatgttaatggaggtgcaattgctcttggacatcc 199 ||||||||||||||||| ||||| ||||| || |||||||| Sbjct: 2460507 aaagtcaatgttaatggtggtgcgattgcactaggacatcc 2460467
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Plus Query: 159 aaagtcaatgttaatggaggtgcaattgctcttggacatccattgggtgccacagg 214 ||||||||||| || || ||||||||||| | ||||||||||| ||||| ||||| Sbjct: 2920059 aaagtcaatgtgaacggcggtgcaattgccatgggacatccattaggtgcaacagg 2920114 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 171 aatggaggtgcaattgctcttggacatccattgggtgc 208 ||||| ||||||||||| || || |||||||||||||| Sbjct: 1448632 aatggcggtgcaattgcactgggtcatccattgggtgc 1448669
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 14 gatgggtgttggtcctgctgttgctat 40 |||||||||||| |||||||||||||| Sbjct: 229653 gatgggtgttggacctgctgttgctat 229679
>gb|AC153386.3| Mus musculus 6 BAC RP23-198D7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 170561 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 380 taactggctttccaaagaaacc 401 |||||||||||||||||||||| Sbjct: 85031 taactggctttccaaagaaacc 85010
>gb|AC154130.1| Tribolium castaneum BAC T.cast_C11O3 (Clemson University Genomics Institute Tribolium castaneum BAC Library (Red Flour Beetle)) complete sequence Length = 148539 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 183 attgctcttggacatccattgggtgc 208 ||||||||||||||||| |||||||| Sbjct: 40526 attgctcttggacatcctttgggtgc 40501
>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete genome Length = 3397754 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 76 atgatgtcgacctttttgagattaatgaggcttttgca 113 ||||||| || ||||||||||||||||| || |||||| Sbjct: 2044678 atgatgtggatctttttgagattaatgaagcgtttgca 2044715
>gb|AC133874.10| Mus musculus chromosome 19, clone RP23-81N16, complete sequence Length = 215113 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 380 taactggctttccaaagaaacc 401 |||||||||||||||||||||| Sbjct: 61157 taactggctttccaaagaaacc 61178
>gb|AY458634.2| Uncultured bacterium 314 clone EBAC750-09G06 genomic sequence Length = 48824 Score = 44.1 bits (22), Expect = 0.48 Identities = 37/42 (88%) Strand = Plus / Minus Query: 158 aaaagtcaatgttaatggaggtgcaattgctcttggacatcc 199 |||||| ||||| ||||| ||||| ||||||||||| ||||| Sbjct: 24386 aaaagtaaatgtaaatggtggtgctattgctcttggtcatcc 24345
>gb|AC132084.2| Mus musculus BAC clone RP24-544J20 from chromosome 5, complete sequence Length = 119933 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 380 taactggctttccaaagaaacc 401 |||||||||||||||||||||| Sbjct: 65985 taactggctttccaaagaaacc 66006
>emb|BX088645.7| Human DNA sequence from clone RP11-74L19 on chromosome 9 Contains a pseudogene similar to part of contactin associated protein family, a novel pseudogene and a CpG island, complete sequence Length = 152623 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 402 gtgtaactatttctcatgcaaa 423 |||||||||||||||||||||| Sbjct: 31791 gtgtaactatttctcatgcaaa 31770
>emb|AL162501.11| Human DNA sequence from clone RP11-138L21 on chromosome 9 Contains the 5' end of the CNTNAP3 gene for a contactin associated protein-like 3 and two CpG islands, complete sequence Length = 118564 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 402 gtgtaactatttctcatgcaaa 423 |||||||||||||||||||||| Sbjct: 87932 gtgtaactatttctcatgcaaa 87953
>ref|XM_963280.1| PREDICTED: Tribolium castaneum similar to CG4600-PA (LOC656773), mRNA Length = 1315 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 183 attgctcttggacatccattgggtgc 208 ||||||||||||||||| |||||||| Sbjct: 1048 attgctcttggacatcctttgggtgc 1073
>emb|X93015.1|BNGBHTPRE B.napus mRNA for glyoxysomal beta-ketoacyl-thiolase precursor Length = 1389 Score = 44.1 bits (22), Expect = 0.48 Identities = 61/74 (82%) Strand = Plus / Plus Query: 243 gagatgaagcgccgaggcaaggactgccggtttggagtaatttctatgtgcataggttct 302 |||||||| ||||| || || ||||| || ||||| ||| |||| |||||||| || | Sbjct: 1225 gagatgaaacgccgcggaaaagactgtcgatttggggtagtttcaatgtgcattgggacg 1284 Query: 303 gggatgggtgcagc 316 |||||||||||||| Sbjct: 1285 gggatgggtgcagc 1298
>emb|CR628337.1| Legionella pneumophila str. Lens complete genome Length = 3345687 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 76 atgatgtcgacctttttgagattaatgaggcttttgca 113 ||||||| || ||||||||||||||||| || |||||| Sbjct: 2002928 atgatgtggatctttttgagattaatgaagcgtttgca 2002965
>emb|CR628336.1| Legionella pneumophila str. Paris complete genome Length = 3503610 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 76 atgatgtcgacctttttgagattaatgaggcttttgca 113 ||||||| || ||||||||||||||||| || |||||| Sbjct: 2020363 atgatgtggatctttttgagattaatgaagcgtttgca 2020400
>gb|AC093874.3| Homo sapiens BAC clone RP11-624O16 from 4, complete sequence Length = 158245 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 415 tcatgcaaattgtgtagctgcc 436 |||||||||||||||||||||| Sbjct: 97495 tcatgcaaattgtgtagctgcc 97474
>gb|AF009224.2|AF009224 Acinetobacter sp. ADP1 ben operon and cat operon, complete sequence Length = 18158 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 171 aatggaggtgcaattgctcttggacatccattgggtgc 208 ||||| ||||||||||| || || |||||||||||||| Sbjct: 17068 aatggcggtgcaattgcactgggtcatccattgggtgc 17105
>ref|XM_391843.2| PREDICTED: Apis mellifera similar to ENSANGP00000013285 (LOC408291), mRNA Length = 2355 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 183 attgctcttggacatccattgg 204 |||||||||||||||||||||| Sbjct: 1398 attgctcttggacatccattgg 1419
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.48 Identities = 37/42 (88%) Strand = Plus / Minus Query: 15 atgggtgttggtcctgctgttgctatcccagcagcagtgaag 56 ||||||||||||||||| || || || ||||| ||||||||| Sbjct: 35100653 atgggtgttggtcctgcagtagcaataccagctgcagtgaag 35100612
>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome Length = 3630528 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 158 aaaagtcaatgttaatggaggtgcaattgc 187 |||||| ||||||||||| ||||||||||| Sbjct: 725961 aaaagtaaatgttaatggtggtgcaattgc 725990
>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643F09 Length = 161001 Score = 44.1 bits (22), Expect = 0.48 Identities = 37/42 (88%) Strand = Plus / Minus Query: 15 atgggtgttggtcctgctgttgctatcccagcagcagtgaag 56 ||||||||||||||||| || || || ||||| ||||||||| Sbjct: 160994 atgggtgttggtcctgcagtagcaataccagctgcagtgaag 160953
>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C12 Length = 103973 Score = 44.1 bits (22), Expect = 0.48 Identities = 37/42 (88%) Strand = Plus / Minus Query: 15 atgggtgttggtcctgctgttgctatcccagcagcagtgaag 56 ||||||||||||||||| || || || ||||| ||||||||| Sbjct: 73816 atgggtgttggtcctgcagtagcaataccagctgcagtgaag 73775
>emb|AL117376.28|HSDJ971B4 Human DNA sequence from clone RP5-971B4 on chromosome 20 Contains the 3' end of the C20orf23 gene for a novel protein similar to KIF1 type and other kinesin-like proteins, complete sequence Length = 162213 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 gtgcataggttctgggatggg 310 ||||||||||||||||||||| Sbjct: 17719 gtgcataggttctgggatggg 17699
>emb|X67696.1|CS3KCT C.sativus mRNA for 3-ketoacyl-CoA thiolase Length = 1709 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 87 ctttttgagattaatgaggcttttgcatc 115 ||||||||||| |||||||| |||||||| Sbjct: 1097 ctttttgagataaatgaggcatttgcatc 1125 Score = 40.1 bits (20), Expect = 7.4 Identities = 47/56 (83%) Strand = Plus / Plus Query: 243 gagatgaagcgccgaggcaaggactgccggtttggagtaatttctatgtgcatagg 298 |||||||| ||||| ||||| || || || |||||||| || || ||||||||||| Sbjct: 1253 gagatgaaacgccgtggcaaagattgtcgttttggagtcatatcaatgtgcatagg 1308
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 165 aatgttaatggaggtgcaattgctcttggacatccattgggtgcc 209 ||||||||||| ||||| ||||| | ||||||||||| |||||| Sbjct: 2730925 aatgttaatggtggtgctattgcgttaggacatccattaggtgcc 2730969
>emb|BX539342.9| Mouse DNA sequence from clone RP24-67F19 on chromosome 7, complete sequence Length = 155752 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 381 aactggctttccaaagaaacc 401 ||||||||||||||||||||| Sbjct: 55323 aactggctttccaaagaaacc 55343
>gb|AC101702.11| Mus musculus chromosome 1, clone RP23-247G20, complete sequence Length = 178193 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 380 taactggctttccaaagaaac 400 ||||||||||||||||||||| Sbjct: 84832 taactggctttccaaagaaac 84812
>emb|AL670959.8| Mouse DNA sequence from clone RP23-94L5 on chromosome 4, complete sequence Length = 262388 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 381 aactggctttccaaagaaacc 401 ||||||||||||||||||||| Sbjct: 1620 aactggctttccaaagaaacc 1600
>emb|AL627342.15| Mouse DNA sequence from clone RP23-281G20 on chromosome 4, complete sequence Length = 84122 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 381 aactggctttccaaagaaacc 401 ||||||||||||||||||||| Sbjct: 83742 aactggctttccaaagaaacc 83722
>ref|XM_750312.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g10720) partial mRNA Length = 1551 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 tcatgcaaattgtgtagctg 434 |||||||||||||||||||| Sbjct: 1178 tcatgcaaattgtgtagctg 1159
>gb|AC116570.3| Mus musculus BAC clone RP23-93O1 from chromosome 1, complete sequence Length = 213410 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 actggctttccaaagaaacc 401 |||||||||||||||||||| Sbjct: 105309 actggctttccaaagaaacc 105290
>gb|AC121803.3| Mus musculus BAC clone RP23-441A23 from chromosome 6, complete sequence Length = 211809 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 atgggtgttggtcctgctgt 34 |||||||||||||||||||| Sbjct: 3702 atgggtgttggtcctgctgt 3721
>gb|AC122834.2| Mus musculus BAC clone RP23-183H9 from 15, complete sequence Length = 191019 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 tgtgtcagcactcttctcaa 241 |||||||||||||||||||| Sbjct: 117242 tgtgtcagcactcttctcaa 117223
>emb|AL008706.1|HS145B12 Human DNA sequence from clone RP1-145B12 on chromosome Xq27-28, complete sequence Length = 107135 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 tgtaattcttcttgggatat 514 |||||||||||||||||||| Sbjct: 92441 tgtaattcttcttgggatat 92422
>emb|CR378670.1| Photobacterium profundum SS9; segment 8/12 Length = 348672 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 cttcaaattaatgatgtcga 85 |||||||||||||||||||| Sbjct: 93370 cttcaaattaatgatgtcga 93351
>emb|BX571866.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 8/17 Length = 349652 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 135 aaaaagttggatctcgatcccgca 158 |||||||||||| ||||||||||| Sbjct: 195451 aaaaagttggatatcgatcccgca 195428
>emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 66 Length = 198372 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 tttctcatgcaaattgtgta 430 |||||||||||||||||||| Sbjct: 84929 tttctcatgcaaattgtgta 84948
>emb|AL035680.1|ATT24A18 Arabidopsis thaliana DNA chromosome 4, BAC clone T24A18, partial sequence (ESSA project) Length = 45980 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 tttctcatgcaaattgtgta 430 |||||||||||||||||||| Sbjct: 1418 tttctcatgcaaattgtgta 1437
>gb|AC161592.2| Mus musculus BAC clone RP24-252H17 from chromosome 13, complete sequence Length = 186026 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 aactggctttccaaagaaac 400 |||||||||||||||||||| Sbjct: 46875 aactggctttccaaagaaac 46894
>gb|AC116663.1| Rattus norvegicus, clone RP31-109I17, complete sequence Length = 165658 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 ttcttcttgggatatgaaaa 519 |||||||||||||||||||| Sbjct: 61325 ttcttcttgggatatgaaaa 61306
>gb|AC159284.2| Mus musculus BAC clone RP23-318K10 from chromosome 6, complete sequence Length = 188553 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 atgggtgttggtcctgctgt 34 |||||||||||||||||||| Sbjct: 9594 atgggtgttggtcctgctgt 9575
>emb|AL953898.20| Zebrafish DNA sequence from clone CH211-232K7 in linkage group 5, complete sequence Length = 176162 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 tgtactgctccaaaaagttg 143 |||||||||||||||||||| Sbjct: 148623 tgtactgctccaaaaagttg 148642
>emb|AL929023.3| Zebrafish DNA sequence from clone DKEY-98G12 in linkage group 17, complete sequence Length = 198736 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 tgtactgctccaaaaagttg 143 |||||||||||||||||||| Sbjct: 7086 tgtactgctccaaaaagttg 7067
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ggtgttggtcctgctgttgc 37 |||||||||||||||||||| Sbjct: 1435725 ggtgttggtcctgctgttgc 1435706
>gb|AE015927.1| Clostridium tetani E88, complete genome Length = 2799251 Score = 40.1 bits (20), Expect = 7.4 Identities = 41/48 (85%) Strand = Plus / Plus Query: 158 aaaagtcaatgttaatggaggtgcaattgctcttggacatccattggg 205 |||||| ||||||||||| || || || || |||||||||||| |||| Sbjct: 295444 aaaagtaaatgttaatggtggagctatagcacttggacatccagtggg 295491
>emb|AL844850.9| Mouse DNA sequence from clone RP23-255B16 on chromosome 2, complete sequence Length = 179361 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 caccattgttctcaattatc 455 |||||||||||||||||||| Sbjct: 111856 caccattgttctcaattatc 111875
>emb|AL512285.8| Human DNA sequence from clone RP11-449O17 on chromosome X, complete sequence Length = 69947 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 tgtaattcttcttgggatat 514 |||||||||||||||||||| Sbjct: 55232 tgtaattcttcttgggatat 55213 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,583,831 Number of Sequences: 3902068 Number of extensions: 4583831 Number of successful extensions: 77934 Number of sequences better than 10.0: 100 Number of HSP's better than 10.0 without gapping: 100 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 77455 Number of HSP's gapped (non-prelim): 481 length of query: 549 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 526 effective length of database: 17,143,297,704 effective search space: 9017374592304 effective search space used: 9017374592304 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)