>TRA5_LACLA (P35881) Transposase for insertion sequence element IS905|
          Length = 391

 Score = 37.0 bits (84), Expect = 0.038
 Identities = 20/82 (24%), Positives = 38/82 (46%)
 Frame = +1

Query: 271 VGISPHGKTYLFACALIVNETANTFKWLFQQFLAAMGGKAPKSIITDQDKAMESAIKDVF 450
           +GI+P G+  +    +  NE   ++  L  + L   G +    ++TD  K +E  I   +
Sbjct: 183 LGITPEGQKAVLGYEIAPNENNASWSTLLDK-LQNQGIQQVSLVVTDGFKGLEQIISQAY 241

Query: 451 PQATHRTCLFHVMKKAEEQMCR 516
           P A  + CL H+ +    ++ R
Sbjct: 242 PLAKQQRCLIHISRNLASKVKR 263

>TRA1_LACHE (P35880) Transposase for insertion sequence element IS1201|
          Length = 369

 Score = 36.6 bits (83), Expect = 0.050
 Identities = 20/74 (27%), Positives = 37/74 (50%)
 Frame = +1

Query: 271 VGISPHGKTYLFACALIVNETANTFKWLFQQFLAAMGGKAPKSIITDQDKAMESAIKDVF 450
           +GI P+G   +    +  NE    +  L Q  + + G +  +  ++D    M++A+   +
Sbjct: 183 IGIKPNGHKEVIDYCIAPNENIEVWTELLQS-MKSRGLEQVELFLSDGVVGMKTALAKTY 241

Query: 451 PQATHRTCLFHVMK 492
           PQA  + CL HVM+
Sbjct: 242 PQAHFQRCLVHVMR 255

>KR103_HUMAN (P60369) Keratin-associated protein 10-3 (Keratin-associated|
           protein 10.3) (High sulfur keratin-associated protein
           10.3) (Keratin-associated protein 18-3)
           (Keratin-associated protein 18.3)
          Length = 221

 Score = 33.5 bits (75), Expect = 0.43
 Identities = 35/116 (30%), Positives = 45/116 (38%), Gaps = 12/116 (10%)
 Frame = -2

Query: 480 EQACSVCCLWKHIFYCAFHCFVLVSNY*FWCLP------SHCCQELLEQPLECVSSLVDN 319
           +QAC V    K +  C   C   V      C+P      S CCQ+   QP  C +S    
Sbjct: 96  QQACCVPVCCKPVC-CVPVCCKPVCCKPICCVPVCSGASSSCCQQSSRQPACCTTSCCRP 154

Query: 318 KSTCKQVCLPMWRNTN----KWCKRQVVLVG*ECCVKADAVPILL-VHCSR-SSIC 169
            S+   +C P+ R+T       C          CC  A  V +L    CSR SS C
Sbjct: 155 SSSVSLLCRPVCRSTYCVPIPSCCAPASTCQPSCCRPASCVSLLCRPTCSRLSSAC 210

>HBT1_YEAST (Q07653) Protein HBT1 (HUB1 target protein 1)|
          Length = 1046

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 17/51 (33%), Positives = 29/51 (56%)
 Frame = +1

Query: 7   KRKVGNYGTTINRELENSDVMEVQQYFQKKQAESPGFCYSMEVDAKNKVRS 159
           K   G+ G + N+E  + D ++V +  +  + ++PG  Y  EVD KNK R+
Sbjct: 841 KASYGSGGNSQNQEYSSDDNIDVNKNAKVLEEDAPG--YKREVDLKNKRRT 889

>KR10B_HUMAN (P60412) Keratin-associated protein 10-11 (Keratin-associated|
           protein 10.11) (High sulfur keratin-associated protein
           10.11) (Keratin-associated protein 18-11)
           (Keratin-associated protein 18.11)
          Length = 298

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 30/114 (26%), Positives = 42/114 (36%), Gaps = 2/114 (1%)
 Frame = -2

Query: 480 EQACSV--CCLWKHIFYCAFHCFVLVSNY*FWCLPSHCCQELLEQPLECVSSLVDNKSTC 307
           +QAC V  CC      YC   C V V +   +      CQ+   QP  C +S     S+ 
Sbjct: 185 QQACCVPVCC---KTVYCKPICCVPVCSRASYSR----CQQPSCQPACCTTSCCRPSSSV 237

Query: 306 KQVCLPMWRNTNKWCKRQVVLVG*ECCVKADAVPILLVHCSRSSICPKNAPDLV 145
             +C P+ R+T              CCV   +       C  S  CP +   L+
Sbjct: 238 SLLCHPVCRST--------------CCVPVSSCCAPTSSCQSSCCCPASCVSLL 277



 Score = 30.0 bits (66), Expect = 4.7
 Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
 Frame = -2

Query: 390 CLPSHCCQELLEQPLECVSSLVDNKSTCKQ--VCLPMWRNTNKWCKRQVVLVG*ECCVKA 217
           C P+ CC  +  +P+ CVS+  ++ S+C Q   C P    ++ + +   V V   CC   
Sbjct: 142 CQPA-CCVPVCCKPVCCVSTCSEDSSSCCQQSSCQPACCTSSSYQQACCVPV---CCKTV 197

Query: 216 DAVPILLVH-CSRSS 175
              PI  V  CSR+S
Sbjct: 198 YCKPICCVPVCSRAS 212

>FUCR_HAEIN (P44780) L-fucose operon activator|
          Length = 249

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 19/62 (30%), Positives = 31/62 (50%)
 Frame = -3

Query: 338 LAVSLTIRAHANKYVFPCGEIPTNGANGKLYLLVRNVVSKLMQSPYSWYIVLDLASVQKT 159
           L+  L  R H N  VF C  I  NG   +   L  ++  K+M++    Y+++D +  +KT
Sbjct: 153 LSEYLLQRLHINFSVFSCSGIDKNGNIWESNELNASLKRKMMEASERAYLLIDSSKFEKT 212

Query: 158 LL 153
            L
Sbjct: 213 SL 214

>CDR4_CANAL (O74676) ABC transporter CDR4|
          Length = 1490

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +3

Query: 339 HIQVVVPTVLGSNGREGTKI-NNY*PGQSNGKRNKRCVSTSNTQNMLVPCHEES*R 503
           H+  VV  V G +    TK+ N++  G S G+R +  ++     N +V C + S R
Sbjct: 279 HLAAVVMAVYGLSHTRNTKVGNDFIRGVSGGERKRVSIAEITLNNAMVQCWDNSTR 334

>KR109_HUMAN (P60411) Keratin-associated protein 10-9 (Keratin-associated|
           protein 10.9) (High sulfur keratin-associated protein
           10.9) (Keratin-associated protein 18-9)
           (Keratin-associated protein 18.9)
          Length = 292

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 22/79 (27%), Positives = 30/79 (37%), Gaps = 5/79 (6%)
 Frame = -2

Query: 390 CLPSHCCQELLEQPLECVSSLVDNKS----TCKQV-CLPMWRNTNKWCKRQVVLVG*ECC 226
           C PS CCQ+   QP  C SS           CK V C+P+    +  C++        CC
Sbjct: 75  CTPS-CCQQSSCQPAYCTSSPCQQACCVPVCCKPVCCVPVCCGASSCCQQSSYQPA--CC 131

Query: 225 VKADAVPILLVHCSRSSIC 169
             +   P   V      +C
Sbjct: 132 ASSSCQPACCVPVCCKPVC 150

>KR108_HUMAN (P60410) Keratin-associated protein 10-8 (Keratin-associated|
           protein 10.8) (High sulfur keratin-associated protein
           10.8) (Keratin-associated protein 18-8)
           (Keratin-associated protein 18.8)
          Length = 259

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 24/92 (26%), Positives = 35/92 (38%), Gaps = 6/92 (6%)
 Frame = -2

Query: 468 SVCCLWKHIFYCAFHCFVLVSNY*FWCLP------SHCCQELLEQPLECVSSLVDNKSTC 307
           S CC +     C   C V +      C+P      S CCQ+   QP  C +S     S+ 
Sbjct: 153 SACCTFSP---CQQACCVPICCKPICCVPVCSGASSLCCQKSSCQPACCTTSCCRPSSSV 209

Query: 306 KQVCLPMWRNTNKWCKRQVVLVG*ECCVKADA 211
             +C P+       C+    +    CCV A +
Sbjct: 210 SLLCRPV-------CRPACCVPVPSCCVPASS 234

>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 609

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = +1

Query: 73  VQQYFQKKQAESPGFCYSMEVDA--KNKVRSVFWTDARSRTMYQEYGDCISFDTT 231
           V+  F++ + ++PG  +  E+DA  K+++ ++   D R +T+ Q   +   FD T
Sbjct: 222 VRDLFKQAREKAPGIIFIDELDAIGKSRLNAIHSNDEREQTLNQLLVEMDGFDNT 276

>KR413_HUMAN (Q9BYU7) Keratin-associated protein 4-13 (Keratin-associated|
           protein 4.13) (Ultrahigh sulfur keratin-associated
           protein 4.13)
          Length = 106

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 30/110 (27%), Positives = 37/110 (33%), Gaps = 6/110 (5%)
 Frame = -2

Query: 480 EQACSV--CCLWKHIFYCAFHCFVLVSNY*FWCLPS----HCCQELLEQPLECVSSLVDN 319
           +Q C +  CC      YC   C          C PS     CCQ +  QP  C  S   +
Sbjct: 12  DQGCGLENCC---RPSYCQTTCCRTTCCRPSCCRPSCCRPQCCQSVCCQPTCCCPSYCVS 68

Query: 318 KSTCKQVCLPMWRNTNKWCKRQVVLVG*ECCVKADAVPILLVHCSRSSIC 169
            S C+  C    R     C+         CCV     P    HC +S  C
Sbjct: 69  -SCCRPQCCQTTRCRTTCCRP-------SCCVSRCYRP----HCGQSLCC 106


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,846,253
Number of Sequences: 219361
Number of extensions: 1785787
Number of successful extensions: 5070
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5049
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4643056080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)