ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags29h19 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK122040.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113E02, full insert sequence Length = 3137 Score = 244 bits (123), Expect = 3e-61 Identities = 330/399 (82%) Strand = Plus / Plus Query: 227 agattctgaggaaaaaactgttccaatggatactgacacaaaggttgagccatcaaaaaa 286 |||||||||||||| | ||| ||||||||||||||| | ||||||||||||| | ||| Sbjct: 1836 agattctgaggaaatatctgctccaatggatactgatgccaaggttgagccattgataaa 1895 Query: 287 gaaagttaagaaaacaaatgtgccagttgctgaaatggtgtatggggcaatgggcactgt 346 ||| || ||||||| |||| |||||| ||| | |||| ||||| ||| |||| ||| Sbjct: 1896 gaatgtgaagaaaattgatgttccagtttctggattggtttatggtgcactggggtctga 1955 Query: 347 tgagctagagaaagctgttgagaaagaatatgaaatggctcttcaggacagagtgatgga 406 || | | ||||||| |||||| || |||||||||||||||||||||||||| ||||| Sbjct: 1956 agaattggtgaaagcttctgagaatgagtatgaaatggctcttcaggacagagtaatgga 2015 Query: 407 agaaaccaaggacaagaaaaattcagttgaggcttatgtttatgacatgcgtaacaagat 466 ||| |||||||| || || ||| | || |||||||||||||||||||||||||||||| | Sbjct: 2016 agacaccaaggagaaaaagaatgctgtcgaggcttatgtttatgacatgcgtaacaagct 2075 Query: 467 tcatgagaagtacaatgattttgtcatgtcggaggatatagaagggttgatggctaaact 526 |||| |||||||| |||||||||||||| ||| | | |||||||| || || || || Sbjct: 2076 ctatgacaagtacaacgattttgtcatgtctgagtacaaggaagggtttattgccaagct 2135 Query: 527 tcaggaggttgaggattggctgtatgaagatggcgaggatgagactaagggagtctatgt 586 |||||||||||||||||||||||| |||||||| || |||||||| || || || ||| | Sbjct: 2136 tcaggaggttgaggattggctgtacgaagatggtgaagatgagacaaaaggggtttatat 2195 Query: 587 tgcaaaactagaagaactgaaaaagcttggcggtcctat 625 |||||| || |||||||| |||||| |||| | |||||| Sbjct: 2196 tgcaaagctggaagaacttaaaaaggttggtgatcctat 2234 Score = 99.6 bits (50), Expect = 1e-17 Identities = 121/144 (84%), Gaps = 3/144 (2%) Strand = Plus / Plus Query: 39 ctcaacatccatgggatagtctctcttgaatcagcaacgatgctggaagaggaggaagtg 98 |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| Sbjct: 1621 ctcaacatccatgggatagtctctattgaatcagcaatgatgctg---gaggaggaagtg 1677 Query: 99 gaagttccggtttcatctatgagtgaggtgccaaaggatgctactacaatggagacagat 158 || |||||||| || ||| | |||| | |||||||| ||||| |||||| |||||| Sbjct: 1678 gatgttccggtagcaactacaaatgagacactaaaggatgatactaaaatggatacagat 1737 Query: 159 gatgcaccacaggaccctgcttct 182 ||||||| | |||||||||||| Sbjct: 1738 gatgcactaggtgaccctgcttct 1761
>gb|AY103680.1| Zea mays PCO080984 mRNA sequence Length = 1931 Score = 222 bits (112), Expect = 1e-54 Identities = 220/256 (85%) Strand = Plus / Plus Query: 355 agaaagctgttgagaaagaatatgaaatggctcttcaggacagagtgatggaagaaacca 414 |||| ||||| |||||||| ||||| ||||||||||| |||||||| ||||||||||| | Sbjct: 890 agaaggctgtagagaaagagtatgagatggctcttcaagacagagtaatggaagaaacaa 949 Query: 415 aggacaagaaaaattcagttgaggcttatgtttatgacatgcgtaacaagattcatgaga 474 |||| ||||| ||| | ||||| |||||||| |||||||||||||||||| | |||| | Sbjct: 950 aggagaagaagaatgctgttgaagcttatgtgtatgacatgcgtaacaagctatatgaca 1009 Query: 475 agtacaatgattttgtcatgtcggaggatatagaagggttgatggctaaacttcaggagg 534 |||||| ||||||||||| ||| ||||| | ||||| ||||| ||||| |||||||||| Sbjct: 1010 agtacagtgattttgtcacgtctgaggacaaggaaggtttgattgctaagcttcaggagg 1069 Query: 535 ttgaggattggctgtatgaagatggcgaggatgagactaagggagtctatgttgcaaaac 594 |||| || ||||| |||||||||||||||||||| |||||||| || ||| |||| || | Sbjct: 1070 ttgaagactggctctatgaagatggcgaggatgaaactaagggggtttatattgctaagc 1129 Query: 595 tagaagaactgaaaaa 610 |||||||||| ||||| Sbjct: 1130 tagaagaacttaaaaa 1145 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 227 agattctgaggaaaaaactgttccaatggatactgacacaaaggttgagccatcaaaaaa 286 |||| ||||||||||| ||||||| ||||| ||||| ||||||||||||| |||||||| Sbjct: 762 agatactgaggaaaaatctgttccgatggaaactgatgcaaaggttgagccgtcaaaaaa 821 Query: 287 gaaagttaagaaaa 300 |||||||||||||| Sbjct: 822 gaaagttaagaaaa 835 Score = 58.0 bits (29), Expect = 4e-05 Identities = 48/53 (90%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 3 caaaggtgagaaggctaaactgaa-gtgaaagttcgcctcaacatccatggga 54 |||||| |||||||| |||||||| |||||||| || |||||||||||||||| Sbjct: 505 caaaggagagaaggccaaactgaaagtgaaagtgcgtctcaacatccatggga 557
>ref|NM_189556.2| Oryza sativa (japonica cultivar-group), mRNA Length = 3139 Score = 220 bits (111), Expect = 4e-54 Identities = 330/403 (81%) Strand = Plus / Plus Query: 209 tgctgaaaacggggcacgagattctgaggaaaaaactgttccaatggatactgacacaaa 268 ||||||||| || |||| | |||||||||||||| | || || ||||| ||||| | || Sbjct: 1852 tgctgaaaatggcgcaccaaattctgaggaaaaatcagtccctatggaaactgatgccaa 1911 Query: 269 ggttgagccatcaaaaaagaaagttaagaaaacaaatgtgccagttgctgaaatggtgta 328 ||||||||||||||| |||||||| |||||||| ||||| ||||||||||| |||| || Sbjct: 1912 ggttgagccatcaaagaagaaagtaaagaaaactaatgttccagttgctgagttggttta 1971 Query: 329 tggggcaatgggcactgttgagctagagaaagctgttgagaaagaatatgaaatggctct 388 ||| || |||| ||| ||| | |||| ||||| || ||||| |||||||||||||| Sbjct: 1972 tggtgccttggggactacagagttgcagaaggctgtggaaaaagagtatgaaatggctct 2031 Query: 389 tcaggacagagtgatggaagaaaccaaggacaagaaaaattcagttgaggcttatgttta 448 ||||||||| ||||||||||| || || || ||||| ||| | || ||| |||||||||| Sbjct: 2032 tcaggacagggtgatggaagagacaaaagataagaagaatgccgtggagtcttatgttta 2091 Query: 449 tgacatgcgtaacaagattcatgagaagtacaatgattttgtcatgtcggaggatataga 508 ||||||||| |||||| | |||| ||||||||||||||||| | | || || | || Sbjct: 2092 tgacatgcgaaacaagctgtatgacaagtacaatgattttgtgactgctgaagacaagga 2151 Query: 509 agggttgatggctaaacttcaggaggttgaggattggctgtatgaagatggcgaggatga 568 || || || ||||| ||||| ||||||||||||||| |||| |||||||| |||||||| Sbjct: 2152 agcattcattgctaagcttcaagaggttgaggattggttgtacgaagatggtgaggatga 2211 Query: 569 gactaagggagtctatgttgcaaaactagaagaactgaaaaag 611 ||| || ||||| |||||||| || || |||||||| |||||| Sbjct: 2212 gaccaaaggagtgtatgttgctaagcttgaagaacttaaaaag 2254 Score = 93.7 bits (47), Expect = 7e-16 Identities = 93/107 (86%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 1 ggcaaaggtgagaaggctaaactgaa-gtgaaagttcgcctcaacatccatgggatagtc 59 ||||||||||| || || |||||||| |||||||| ||||| |||||||||||| | ||| Sbjct: 1613 ggcaaaggtgacaaagcgaaactgaaagtgaaagtccgccttaacatccatggggtggtc 1672 Query: 60 tctcttgaatcagcaacgatgctggaagaggaggaagtggaagttcc 106 | ||||||||||||| ||| |||| |||||||||||||||||||| Sbjct: 1673 acagttgaatcagcaacaatgttggaggaggaggaagtggaagttcc 1719 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 atggagacagatgatgcacc 166 |||||||||||||||||||| Sbjct: 1760 atggagacagatgatgcacc 1779
>dbj|AK100676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113C17, full insert sequence Length = 3139 Score = 220 bits (111), Expect = 4e-54 Identities = 330/403 (81%) Strand = Plus / Plus Query: 209 tgctgaaaacggggcacgagattctgaggaaaaaactgttccaatggatactgacacaaa 268 ||||||||| || |||| | |||||||||||||| | || || ||||| ||||| | || Sbjct: 1852 tgctgaaaatggcgcaccaaattctgaggaaaaatcagtccctatggaaactgatgccaa 1911 Query: 269 ggttgagccatcaaaaaagaaagttaagaaaacaaatgtgccagttgctgaaatggtgta 328 ||||||||||||||| |||||||| |||||||| ||||| ||||||||||| |||| || Sbjct: 1912 ggttgagccatcaaagaagaaagtaaagaaaactaatgttccagttgctgagttggttta 1971 Query: 329 tggggcaatgggcactgttgagctagagaaagctgttgagaaagaatatgaaatggctct 388 ||| || |||| ||| ||| | |||| ||||| || ||||| |||||||||||||| Sbjct: 1972 tggtgccttggggactacagagttgcagaaggctgtggaaaaagagtatgaaatggctct 2031 Query: 389 tcaggacagagtgatggaagaaaccaaggacaagaaaaattcagttgaggcttatgttta 448 ||||||||| ||||||||||| || || || ||||| ||| | || ||| |||||||||| Sbjct: 2032 tcaggacagggtgatggaagagacaaaagataagaagaatgccgtggagtcttatgttta 2091 Query: 449 tgacatgcgtaacaagattcatgagaagtacaatgattttgtcatgtcggaggatataga 508 ||||||||| |||||| | |||| ||||||||||||||||| | | || || | || Sbjct: 2092 tgacatgcgaaacaagctgtatgacaagtacaatgattttgtgactgctgaagacaagga 2151 Query: 509 agggttgatggctaaacttcaggaggttgaggattggctgtatgaagatggcgaggatga 568 || || || ||||| ||||| ||||||||||||||| |||| |||||||| |||||||| Sbjct: 2152 agcattcattgctaagcttcaagaggttgaggattggttgtacgaagatggtgaggatga 2211 Query: 569 gactaagggagtctatgttgcaaaactagaagaactgaaaaag 611 ||| || ||||| |||||||| || || |||||||| |||||| Sbjct: 2212 gaccaaaggagtgtatgttgctaagcttgaagaacttaaaaag 2254 Score = 93.7 bits (47), Expect = 7e-16 Identities = 93/107 (86%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 1 ggcaaaggtgagaaggctaaactgaa-gtgaaagttcgcctcaacatccatgggatagtc 59 ||||||||||| || || |||||||| |||||||| ||||| |||||||||||| | ||| Sbjct: 1613 ggcaaaggtgacaaagcgaaactgaaagtgaaagtccgccttaacatccatggggtggtc 1672 Query: 60 tctcttgaatcagcaacgatgctggaagaggaggaagtggaagttcc 106 | ||||||||||||| ||| |||| |||||||||||||||||||| Sbjct: 1673 acagttgaatcagcaacaatgttggaggaggaggaagtggaagttcc 1719 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 atggagacagatgatgcacc 166 |||||||||||||||||||| Sbjct: 1760 atggagacagatgatgcacc 1779
>gb|BT018784.1| Zea mays clone EL01N0527D07.d mRNA sequence Length = 2082 Score = 180 bits (91), Expect = 4e-42 Identities = 208/247 (84%) Strand = Plus / Plus Query: 355 agaaagctgttgagaaagaatatgaaatggctcttcaggacagagtgatggaagaaacca 414 |||| ||||| |||||||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 1048 agaaggctgtagagaaagagtatgagatggctcttcaggacagagtaatggaagaaacca 1107 Query: 415 aggacaagaaaaattcagttgaggcttatgtttatgacatgcgtaacaagattcatgaga 474 | || ||||||||| | || || |||||||| |||||||||||||||||| | | || | Sbjct: 1108 aagagaagaaaaatgctgtggaagcttatgtctatgacatgcgtaacaagctctacgaca 1167 Query: 475 agtacaatgattttgtcatgtcggaggatatagaagggttgatggctaaacttcaggagg 534 |||||| |||||||| | | ||||| | ||||||||||| | || |||||||||| Sbjct: 1168 ggtacaacgattttgtgacacctgaggagaaggaagggttgattggaaagcttcaggagg 1227 Query: 535 ttgaggattggctgtatgaagatggcgaggatgagactaagggagtctatgttgcaaaac 594 |||| |||||||| ||||||||||| ||||||||||| |||||||||||| || | |||| Sbjct: 1228 ttgaagattggctatatgaagatggtgaggatgagacaaagggagtctatatttctaaac 1287 Query: 595 tagaaga 601 | ||||| Sbjct: 1288 tggaaga 1294 Score = 87.7 bits (44), Expect = 4e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 234 gaggaaaaaactgttccaatggatactgacacaaaggttgagccatcaaaaaagaaagtt 293 ||||||||| ||||||||||||| ||||| ||||||||||||||||||||| ||||||| Sbjct: 927 gaggaaaaatctgttccaatggaaactgatgcaaaggttgagccatcaaaaaggaaagtt 986 Query: 294 aaga 297 |||| Sbjct: 987 aaga 990 Score = 52.0 bits (26), Expect = 0.002 Identities = 75/90 (83%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 3 caaaggtgagaaggctaaactgaa-gtgaaagttcgcctcaacatccatgggatagtctc 61 ||||||||||| ||| |||||||| || ||||| || ||||||||||| ||||| ||| | Sbjct: 675 caaaggtgagagggccaaactgaaagttaaagtgcgtctcaacatccacgggattgtcac 734 Query: 62 tcttgaatcagcaacgatgctggaagagga 91 |||| ||||| | ||||||||| ||||| Sbjct: 735 agttgattcagctatgatgctggaggagga 764
>gb|AY108406.1| Zea mays PCO080983 mRNA sequence Length = 1289 Score = 180 bits (91), Expect = 4e-42 Identities = 208/247 (84%) Strand = Plus / Plus Query: 355 agaaagctgttgagaaagaatatgaaatggctcttcaggacagagtgatggaagaaacca 414 |||| ||||| |||||||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 226 agaaggctgtagagaaagagtatgagatggctcttcaggacagagtaatggaagaaacca 285 Query: 415 aggacaagaaaaattcagttgaggcttatgtttatgacatgcgtaacaagattcatgaga 474 | || ||||||||| | || || |||||||| |||||||||||||||||| | | || | Sbjct: 286 aagagaagaaaaatgctgtggaagcttatgtctatgacatgcgtaacaagctctacgaca 345 Query: 475 agtacaatgattttgtcatgtcggaggatatagaagggttgatggctaaacttcaggagg 534 |||||| |||||||| | | ||||| | ||||||||||| | || |||||||||| Sbjct: 346 ggtacaacgattttgtgacacctgaggagaaggaagggttgattggaaagcttcaggagg 405 Query: 535 ttgaggattggctgtatgaagatggcgaggatgagactaagggagtctatgttgcaaaac 594 |||| |||||||| ||||||||||| ||||||||||| |||||||||||| || | |||| Sbjct: 406 ttgaagattggctatatgaagatggtgaggatgagacaaagggagtctatatttctaaac 465 Query: 595 tagaaga 601 | ||||| Sbjct: 466 tggaaga 472 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 234 gaggaaaaaactgttccaatggatactgacacaaaggttgagccatcaaaaaagaaagt 292 ||||||||| ||||||||||||| ||||| ||||||||||||||||||||| |||||| Sbjct: 105 gaggaaaaatctgttccaatggaaactgatgcaaaggttgagccatcaaaaaggaaagt 163
>dbj|AK061691.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-C02, full insert sequence Length = 1144 Score = 151 bits (76), Expect = 3e-33 Identities = 262/324 (80%) Strand = Plus / Plus Query: 288 aaagttaagaaaacaaatgtgccagttgctgaaatggtgtatggggcaatgggcactgtt 347 ||||| |||||||| ||||| ||||||||||| |||| ||||| || |||| ||| Sbjct: 1 aaagtaaagaaaactaatgttccagttgctgagttggtttatggtgccttggggactaca 60 Query: 348 gagctagagaaagctgttgagaaagaatatgaaatggctcttcaggacagagtgatggaa 407 ||| | |||| ||||| || ||||| ||||||||||||||||||||||| ||||||||| Sbjct: 61 gagttgcagaaggctgtggaaaaagagtatgaaatggctcttcaggacagggtgatggaa 120 Query: 408 gaaaccaaggacaagaaaaattcagttgaggcttatgtttatgacatgcgtaacaagatt 467 || || || || ||||| ||| | || ||| ||||||||||||||||||| ||| || | Sbjct: 121 gagacaaaagataagaagaatgccgtggagtcttatgtttatgacatgcgaaacgagctg 180 Query: 468 catgagaagtacaatgattttgtcatgtcggaggatatagaagggttgatggctaaactt 527 |||| ||||||||||||||||| | | || || | |||| || || ||||| ||| Sbjct: 181 tatgacaagtacaatgattttgtgactgctgaagacaaggaagcattcattgctaagctt 240 Query: 528 caggaggttgaggattggctgtatgaagatggcgaggatgagactaagggagtctatgtt 587 || |||||||||||| || |||| |||||||| ||||||||||| || ||||| |||||| Sbjct: 241 caagaggttgaggataggttgtacgaagatggtgaggatgagaccaaaggagtgtatgtt 300 Query: 588 gcaaaactagaagaactgaaaaag 611 || || || |||||||| |||||| Sbjct: 301 gctaagcttgaagaacttaaaaag 324
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 137 bits (69), Expect = 5e-29 Identities = 165/197 (83%) Strand = Plus / Plus Query: 268 aggttgagccatcaaaaaagaaagttaagaaaacaaatgtgccagttgctgaaatggtgt 327 |||||||||||||||| |||||||| |||||||| ||||| ||||||||||| |||| | Sbjct: 4256827 aggttgagccatcaaagaagaaagtaaagaaaactaatgttccagttgctgagttggttt 4256886 Query: 328 atggggcaatgggcactgttgagctagagaaagctgttgagaaagaatatgaaatggctc 387 |||| || |||| ||| ||| | |||| ||||| || ||||| ||||||||||||| Sbjct: 4256887 atggtgccttggggactacagagttgcagaaggctgtggaaaaagagtatgaaatggctc 4256946 Query: 388 ttcaggacagagtgatggaagaaaccaaggacaagaaaaattcagttgaggcttatgttt 447 |||||||||| ||||||||||| || || || ||||| ||| | || ||| ||||||||| Sbjct: 4256947 ttcaggacagggtgatggaagagacaaaagataagaagaatgccgtggagtcttatgttt 4257006 Query: 448 atgacatgcgtaacaag 464 |||||||||| |||||| Sbjct: 4257007 atgacatgcgaaacaag 4257023 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 519 gctaaacttcaggaggttgaggattggctgtatgaagatggcgaggatgagactaaggga 578 ||||| ||||| ||||||||||||||| |||| |||||||| ||||||||||| || ||| Sbjct: 4257151 gctaagcttcaagaggttgaggattggttgtacgaagatggtgaggatgagaccaaagga 4257210 Query: 579 gtctatgttgcaaaactagaagaactgaaaaag 611 || |||||||| || || |||||||| |||||| Sbjct: 4257211 gtgtatgttgctaagcttgaagaacttaaaaag 4257243 Score = 58.0 bits (29), Expect = 4e-05 Identities = 66/77 (85%), Gaps = 1/77 (1%) Strand = Plus / Plus Query: 1 ggcaaaggtgagaaggctaaactgaa-gtgaaagttcgcctcaacatccatgggatagtc 59 ||||||||||| || || |||||||| |||||||| ||||| |||||||||||| | ||| Sbjct: 4255860 ggcaaaggtgacaaagcgaaactgaaagtgaaagtccgccttaacatccatggggtggtc 4255919 Query: 60 tctcttgaatcagcaac 76 | ||||||||||||| Sbjct: 4255920 acagttgaatcagcaac 4255936 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 77 gatgctggaagaggaggaagtggaagttcc 106 |||| |||| |||||||||||||||||||| Sbjct: 4256033 gatgttggaggaggaggaagtggaagttcc 4256062 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 432 gttgaggcttatgtttatgacatg 455 ||||||||||||||| |||||||| Sbjct: 31462542 gttgaggcttatgttgatgacatg 31462519 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 atggagacagatgatgcacc 166 |||||||||||||||||||| Sbjct: 4256103 atggagacagatgatgcacc 4256122
>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1174_D05 Length = 128525 Score = 137 bits (69), Expect = 5e-29 Identities = 165/197 (83%) Strand = Plus / Plus Query: 268 aggttgagccatcaaaaaagaaagttaagaaaacaaatgtgccagttgctgaaatggtgt 327 |||||||||||||||| |||||||| |||||||| ||||| ||||||||||| |||| | Sbjct: 94794 aggttgagccatcaaagaagaaagtaaagaaaactaatgttccagttgctgagttggttt 94853 Query: 328 atggggcaatgggcactgttgagctagagaaagctgttgagaaagaatatgaaatggctc 387 |||| || |||| ||| ||| | |||| ||||| || ||||| ||||||||||||| Sbjct: 94854 atggtgccttggggactacagagttgcagaaggctgtggaaaaagagtatgaaatggctc 94913 Query: 388 ttcaggacagagtgatggaagaaaccaaggacaagaaaaattcagttgaggcttatgttt 447 |||||||||| ||||||||||| || || || ||||| ||| | || ||| ||||||||| Sbjct: 94914 ttcaggacagggtgatggaagagacaaaagataagaagaatgccgtggagtcttatgttt 94973 Query: 448 atgacatgcgtaacaag 464 |||||||||| |||||| Sbjct: 94974 atgacatgcgaaacaag 94990 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 519 gctaaacttcaggaggttgaggattggctgtatgaagatggcgaggatgagactaaggga 578 ||||| ||||| ||||||||||||||| |||| |||||||| ||||||||||| || ||| Sbjct: 95118 gctaagcttcaagaggttgaggattggttgtacgaagatggtgaggatgagaccaaagga 95177 Query: 579 gtctatgttgcaaaactagaagaactgaaaaag 611 || |||||||| || || |||||||| |||||| Sbjct: 95178 gtgtatgttgctaagcttgaagaacttaaaaag 95210 Score = 58.0 bits (29), Expect = 4e-05 Identities = 66/77 (85%), Gaps = 1/77 (1%) Strand = Plus / Plus Query: 1 ggcaaaggtgagaaggctaaactgaa-gtgaaagttcgcctcaacatccatgggatagtc 59 ||||||||||| || || |||||||| |||||||| ||||| |||||||||||| | ||| Sbjct: 93827 ggcaaaggtgacaaagcgaaactgaaagtgaaagtccgccttaacatccatggggtggtc 93886 Query: 60 tctcttgaatcagcaac 76 | ||||||||||||| Sbjct: 93887 acagttgaatcagcaac 93903 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 77 gatgctggaagaggaggaagtggaagttcc 106 |||| |||| |||||||||||||||||||| Sbjct: 94000 gatgttggaggaggaggaagtggaagttcc 94029 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 atggagacagatgatgcacc 166 |||||||||||||||||||| Sbjct: 94070 atggagacagatgatgcacc 94089
>dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0666G04 Length = 141983 Score = 137 bits (69), Expect = 5e-29 Identities = 165/197 (83%) Strand = Plus / Plus Query: 268 aggttgagccatcaaaaaagaaagttaagaaaacaaatgtgccagttgctgaaatggtgt 327 |||||||||||||||| |||||||| |||||||| ||||| ||||||||||| |||| | Sbjct: 36597 aggttgagccatcaaagaagaaagtaaagaaaactaatgttccagttgctgagttggttt 36656 Query: 328 atggggcaatgggcactgttgagctagagaaagctgttgagaaagaatatgaaatggctc 387 |||| || |||| ||| ||| | |||| ||||| || ||||| ||||||||||||| Sbjct: 36657 atggtgccttggggactacagagttgcagaaggctgtggaaaaagagtatgaaatggctc 36716 Query: 388 ttcaggacagagtgatggaagaaaccaaggacaagaaaaattcagttgaggcttatgttt 447 |||||||||| ||||||||||| || || || ||||| ||| | || ||| ||||||||| Sbjct: 36717 ttcaggacagggtgatggaagagacaaaagataagaagaatgccgtggagtcttatgttt 36776 Query: 448 atgacatgcgtaacaag 464 |||||||||| |||||| Sbjct: 36777 atgacatgcgaaacaag 36793 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 519 gctaaacttcaggaggttgaggattggctgtatgaagatggcgaggatgagactaaggga 578 ||||| ||||| ||||||||||||||| |||| |||||||| ||||||||||| || ||| Sbjct: 36921 gctaagcttcaagaggttgaggattggttgtacgaagatggtgaggatgagaccaaagga 36980 Query: 579 gtctatgttgcaaaactagaagaactgaaaaag 611 || |||||||| || || |||||||| |||||| Sbjct: 36981 gtgtatgttgctaagcttgaagaacttaaaaag 37013 Score = 58.0 bits (29), Expect = 4e-05 Identities = 66/77 (85%), Gaps = 1/77 (1%) Strand = Plus / Plus Query: 1 ggcaaaggtgagaaggctaaactgaa-gtgaaagttcgcctcaacatccatgggatagtc 59 ||||||||||| || || |||||||| |||||||| ||||| |||||||||||| | ||| Sbjct: 35630 ggcaaaggtgacaaagcgaaactgaaagtgaaagtccgccttaacatccatggggtggtc 35689 Query: 60 tctcttgaatcagcaac 76 | ||||||||||||| Sbjct: 35690 acagttgaatcagcaac 35706 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 77 gatgctggaagaggaggaagtggaagttcc 106 |||| |||| |||||||||||||||||||| Sbjct: 35803 gatgttggaggaggaggaagtggaagttcc 35832 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 atggagacagatgatgcacc 166 |||||||||||||||||||| Sbjct: 35873 atggagacagatgatgcacc 35892
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 129 bits (65), Expect = 1e-26 Identities = 98/109 (89%) Strand = Plus / Plus Query: 356 gaaagctgttgagaaagaatatgaaatggctcttcaggacagagtgatggaagaaaccaa 415 ||||||| |||||| || |||||||||||||||||||||||||| |||||||||||||| Sbjct: 4823287 gaaagcttctgagaatgagtatgaaatggctcttcaggacagagtaatggaagaaaccaa 4823346 Query: 416 ggacaagaaaaattcagttgaggcttatgtttatgacatgcgtaacaag 464 ||| || || ||| | || |||||||||||||||||||||||||||||| Sbjct: 4823347 ggagaaaaagaatgctgtcgaggcttatgtttatgacatgcgtaacaag 4823395 Score = 109 bits (55), Expect = 1e-20 Identities = 121/143 (84%) Strand = Plus / Plus Query: 469 atgagaagtacaatgattttgtcatgtcggaggatatagaagggttgatggctaaacttc 528 |||| |||||||| |||||||||||||| ||| | | |||||||| || || || |||| Sbjct: 4823470 atgacaagtacaacgattttgtcatgtctgagtacaaggaagggtttattgccaagcttc 4823529 Query: 529 aggaggttgaggattggctgtatgaagatggcgaggatgagactaagggagtctatgttg 588 |||||||||||||||||||||| |||||||| || |||||||| || || || ||| ||| Sbjct: 4823530 aggaggttgaggattggctgtacgaagatggtgaagatgagacaaaaggggtttatattg 4823589 Query: 589 caaaactagaagaactgaaaaag 611 |||| || |||||||| |||||| Sbjct: 4823590 caaagctggaagaacttaaaaag 4823612 Score = 65.9 bits (33), Expect = 2e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 39 ctcaacatccatgggatagtctctcttgaatcagcaa 75 |||||||||||||||||||||||| |||||||||||| Sbjct: 4822486 ctcaacatccatgggatagtctctattgaatcagcaa 4822522 Score = 48.1 bits (24), Expect = 0.036 Identities = 33/36 (91%) Strand = Plus / Plus Query: 227 agattctgaggaaaaaactgttccaatggatactga 262 |||||||||||||| | ||| ||||||||||||||| Sbjct: 4822786 agattctgaggaaatatctgctccaatggatactga 4822821 Score = 48.1 bits (24), Expect = 0.036 Identities = 45/52 (86%) Strand = Plus / Plus Query: 131 aaaggatgctactacaatggagacagatgatgcaccacaggaccctgcttct 182 |||||||| ||||| |||||| ||||||||||||| | |||||||||||| Sbjct: 4822660 aaaggatgatactaaaatggatacagatgatgcactaggtgaccctgcttct 4822711
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 129 bits (65), Expect = 1e-26 Identities = 98/109 (89%) Strand = Plus / Plus Query: 356 gaaagctgttgagaaagaatatgaaatggctcttcaggacagagtgatggaagaaaccaa 415 ||||||| |||||| || |||||||||||||||||||||||||| |||||||||||||| Sbjct: 95695 gaaagcttctgagaatgagtatgaaatggctcttcaggacagagtaatggaagaaaccaa 95754 Query: 416 ggacaagaaaaattcagttgaggcttatgtttatgacatgcgtaacaag 464 ||| || || ||| | || |||||||||||||||||||||||||||||| Sbjct: 95755 ggagaaaaagaatgctgtcgaggcttatgtttatgacatgcgtaacaag 95803 Score = 109 bits (55), Expect = 1e-20 Identities = 121/143 (84%) Strand = Plus / Plus Query: 469 atgagaagtacaatgattttgtcatgtcggaggatatagaagggttgatggctaaacttc 528 |||| |||||||| |||||||||||||| ||| | | |||||||| || || || |||| Sbjct: 95878 atgacaagtacaacgattttgtcatgtctgagtacaaggaagggtttattgccaagcttc 95937 Query: 529 aggaggttgaggattggctgtatgaagatggcgaggatgagactaagggagtctatgttg 588 |||||||||||||||||||||| |||||||| || |||||||| || || || ||| ||| Sbjct: 95938 aggaggttgaggattggctgtacgaagatggtgaagatgagacaaaaggggtttatattg 95997 Query: 589 caaaactagaagaactgaaaaag 611 |||| || |||||||| |||||| Sbjct: 95998 caaagctggaagaacttaaaaag 96020 Score = 65.9 bits (33), Expect = 2e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 39 ctcaacatccatgggatagtctctcttgaatcagcaa 75 |||||||||||||||||||||||| |||||||||||| Sbjct: 94894 ctcaacatccatgggatagtctctattgaatcagcaa 94930 Score = 48.1 bits (24), Expect = 0.036 Identities = 33/36 (91%) Strand = Plus / Plus Query: 227 agattctgaggaaaaaactgttccaatggatactga 262 |||||||||||||| | ||| ||||||||||||||| Sbjct: 95194 agattctgaggaaatatctgctccaatggatactga 95229 Score = 48.1 bits (24), Expect = 0.036 Identities = 45/52 (86%) Strand = Plus / Plus Query: 131 aaaggatgctactacaatggagacagatgatgcaccacaggaccctgcttct 182 |||||||| ||||| |||||| ||||||||||||| | |||||||||||| Sbjct: 95068 aaaggatgatactaaaatggatacagatgatgcactaggtgaccctgcttct 95119
>ref|NM_180653.1| Arabidopsis thaliana ATP binding AT1G79920 transcript variant AT1G79920.1 mRNA, complete cds Length = 2941 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 366 gagaaagaatatgaaatggctcttcaggacagagtgatggaagaaaccaaggacaagaaa 425 ||||| |||| ||| |||||||| || |||||||| |||||||| ||||||||| ||| Sbjct: 1953 gagaaggaatttgagatggctctgcaagacagagttatggaagagaccaaggaccggaag 2012 Query: 426 aattcagttgaggcttatgtttatgacatgcgtaacaa 463 ||| | |||||| ||||||||||||| ||||| ||||| Sbjct: 2013 aatgctgttgagtcttatgtttatgatatgcgaaacaa 2050 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 528 caggaggttgaggattggctgtatgaagatggcgaggatgagactaagggagtctatgtt 587 ||||| |||||||||||| ||||||||||||| || |||||||| || || || |||||| Sbjct: 2114 caggaagttgaggattggttgtatgaagatggggaagatgagaccaaaggtgtttatgtt 2173 Query: 588 gcaaa 592 ||||| Sbjct: 2174 gcaaa 2178 Score = 40.1 bits (20), Expect = 8.7 Identities = 47/56 (83%) Strand = Plus / Plus Query: 48 catgggatagtctctcttgaatcagcaacgatgctggaagaggaggaagtggaagt 103 ||||| || |||||| ||||||||||||| | |||||||||| ||||| ||||| Sbjct: 1608 catggaattgtctctgttgaatcagcaactcttttggaagaggaagaagttgaagt 1663
>ref|NM_106641.3| Arabidopsis thaliana ATP binding AT1G79920 transcript variant AT1G79920.2 mRNA, complete cds Length = 2941 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 366 gagaaagaatatgaaatggctcttcaggacagagtgatggaagaaaccaaggacaagaaa 425 ||||| |||| ||| |||||||| || |||||||| |||||||| ||||||||| ||| Sbjct: 1953 gagaaggaatttgagatggctctgcaagacagagttatggaagagaccaaggaccggaag 2012 Query: 426 aattcagttgaggcttatgtttatgacatgcgtaacaa 463 ||| | |||||| ||||||||||||| ||||| ||||| Sbjct: 2013 aatgctgttgagtcttatgtttatgatatgcgaaacaa 2050 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 528 caggaggttgaggattggctgtatgaagatggcgaggatgagactaagggagtctatgtt 587 ||||| |||||||||||| ||||||||||||| || |||||||| || || || |||||| Sbjct: 2114 caggaagttgaggattggttgtatgaagatggggaagatgagaccaaaggtgtttatgtt 2173 Query: 588 gcaaa 592 ||||| Sbjct: 2174 gcaaa 2178 Score = 40.1 bits (20), Expect = 8.7 Identities = 47/56 (83%) Strand = Plus / Plus Query: 48 catgggatagtctctcttgaatcagcaacgatgctggaagaggaggaagtggaagt 103 ||||| || |||||| ||||||||||||| | |||||||||| ||||| ||||| Sbjct: 1608 catggaattgtctctgttgaatcagcaactcttttggaagaggaagaagttgaagt 1663
>gb|BT000810.1| Arabidopsis thaliana At1g79920 mRNA sequence Length = 2952 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 366 gagaaagaatatgaaatggctcttcaggacagagtgatggaagaaaccaaggacaagaaa 425 ||||| |||| ||| |||||||| || |||||||| |||||||| ||||||||| ||| Sbjct: 1946 gagaaggaatttgagatggctctgcaagacagagttatggaagagaccaaggaccggaag 2005 Query: 426 aattcagttgaggcttatgtttatgacatgcgtaacaa 463 ||| | |||||| ||||||||||||| ||||| ||||| Sbjct: 2006 aatgctgttgagtcttatgtttatgatatgcgaaacaa 2043 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 528 caggaggttgaggattggctgtatgaagatggcgaggatgagactaagggagtctatgtt 587 ||||| |||||||||||| ||||||||||||| || |||||||| || || || |||||| Sbjct: 2108 caggaagttgaggattggttgtatgaagatggggaagatgagaccaaaggtgtttatgtt 2167 Query: 588 gcaaa 592 ||||| Sbjct: 2168 gcaaa 2172 Score = 40.1 bits (20), Expect = 8.7 Identities = 47/56 (83%) Strand = Plus / Plus Query: 48 catgggatagtctctcttgaatcagcaacgatgctggaagaggaggaagtggaagt 103 ||||| || |||||| ||||||||||||| | |||||||||| ||||| ||||| Sbjct: 1601 catggaattgtctctgttgaatcagcaactcttttggaagaggaagaagttgaagt 1656
>emb|Z70314.1|ATHSP91 A.thaliana mRNA for heat-shock protein Length = 2923 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 366 gagaaagaatatgaaatggctcttcaggacagagtgatggaagaaaccaaggacaagaaa 425 ||||| |||| ||| |||||||| || |||||||| |||||||| ||||||||| ||| Sbjct: 1963 gagaaggaatttgagatggctctgcaagacagagttatggaagagaccaaggaccggaag 2022 Query: 426 aattcagttgaggcttatgtttatgacatgcgtaacaa 463 ||| | |||||| ||||||||||||| ||||| ||||| Sbjct: 2023 aatgctgttgagtcttatgtttatgatatgcgaaacaa 2060 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 528 caggaggttgaggattggctgtatgaagatggcgaggatgagactaagggagtctatgtt 587 ||||| || ||||||||| ||||||||||||| || |||||||| || || || |||||| Sbjct: 2125 caggaagtggaggattggttgtatgaagatggggaagatgagaccaaaggtgtttatgtt 2184 Query: 588 gc 589 || Sbjct: 2185 gc 2186 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 82 tggaagaggaggaagtggaagttccggt 109 |||||||||| ||||| ||||||||||| Sbjct: 1652 tggaagaggaagaagttgaagttccggt 1679
>gb|AY065177.1| Arabidopsis thaliana putative heat-shock protein (At1g79920; F19K16.12) mRNA, complete cds Length = 2850 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 366 gagaaagaatatgaaatggctcttcaggacagagtgatggaagaaaccaaggacaagaaa 425 ||||| |||| ||| |||||||| || |||||||| |||||||| ||||||||| ||| Sbjct: 1953 gagaaggaatttgagatggctctgcaagacagagttatggaagagaccaaggaccggaag 2012 Query: 426 aattcagttgaggcttatgtttatgacatgcgtaacaa 463 ||| | |||||| ||||||||||||| ||||| ||||| Sbjct: 2013 aatgctgttgagtcttatgtttatgatatgcgaaacaa 2050 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 528 caggaggttgaggattggctgtatgaagatggcgaggatgagactaagggagtctatgtt 587 ||||| |||||||||||| ||||||||||||| || |||||||| || || || |||||| Sbjct: 2115 caggaagttgaggattggttgtatgaagatggggaagatgagaccaaaggtgtttatgtt 2174 Query: 588 gcaaa 592 ||||| Sbjct: 2175 gcaaa 2179 Score = 40.1 bits (20), Expect = 8.7 Identities = 47/56 (83%) Strand = Plus / Plus Query: 48 catgggatagtctctcttgaatcagcaacgatgctggaagaggaggaagtggaagt 103 ||||| || |||||| ||||||||||||| | |||||||||| ||||| ||||| Sbjct: 1608 catggaattgtctctgttgaatcagcaactcttttggaagaggaagaagttgaagt 1663
>gb|AC011717.6|AC011717 Arabidopsis thaliana chromosome 1 BAC F19K16 genomic sequence, complete sequence Length = 111301 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 366 gagaaagaatatgaaatggctcttcaggacagagtgatggaagaaaccaaggacaagaaa 425 ||||| |||| ||| |||||||| || |||||||| |||||||| ||||||||| ||| Sbjct: 44196 gagaaggaatttgagatggctctgcaagacagagttatggaagagaccaaggaccggaag 44255 Query: 426 aattcagttgaggcttatgtttatgacatgcgtaacaa 463 ||| | |||||| ||||||||||||| ||||| ||||| Sbjct: 44256 aatgctgttgagtcttatgtttatgatatgcgaaacaa 44293 Score = 67.9 bits (34), Expect = 4e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 366 gagaaagaatatgaaatggctcttcaggacagagtgatggaagaaaccaaggacaagaaa 425 ||||| |||| ||| |||||| | || |||||||| |||||||| ||||||||| ||| Sbjct: 39351 gagaaggaatttgagatggctttgcaagacagagttatggaagagaccaaggaccggaag 39410 Query: 426 aattcagttgaggcttatgtttatgacatgcgtaacaa 463 ||| | |||||| ||||||||||||| ||||| ||||| Sbjct: 39411 aatgctgttgagtcttatgtttatgatatgcggaacaa 39448 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 528 caggaggttgaggattggctgtatgaagatggcgaggatgagactaagggagtctatgtt 587 ||||| |||||||||||| ||||||||||||| || |||||||| || || || |||||| Sbjct: 44442 caggaagttgaggattggttgtatgaagatggggaagatgagaccaaaggtgtttatgtt 44501 Query: 588 gcaaa 592 ||||| Sbjct: 44502 gcaaa 44506 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 528 caggaggttgaggattggctgtatgaagatggcgaggatgagactaagggagtctatgtt 587 ||||| |||||||||||| ||||||||||||| || |||||||| || || || |||||| Sbjct: 39597 caggaagttgaggattggttgtatgaagatggggaagatgagaccaaaggtgtttatgtt 39656 Query: 588 gc 589 || Sbjct: 39657 gc 39658 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 82 tggaagaggaggaagtggaagttccggt 109 |||||||||| ||||| ||||||||||| Sbjct: 38956 tggaagaggaagaagttgaagttccggt 38983
>ref|NM_106642.3| Arabidopsis thaliana HSP91 AT1G79930 (HSP91) transcript variant AT1G79930.1 mRNA, complete cds Length = 2949 Score = 67.9 bits (34), Expect = 4e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 366 gagaaagaatatgaaatggctcttcaggacagagtgatggaagaaaccaaggacaagaaa 425 ||||| |||| ||| |||||| | || |||||||| |||||||| ||||||||| ||| Sbjct: 1960 gagaaggaatttgagatggctttgcaagacagagttatggaagagaccaaggaccggaag 2019 Query: 426 aattcagttgaggcttatgtttatgacatgcgtaacaa 463 ||| | |||||| ||||||||||||| ||||| ||||| Sbjct: 2020 aatgctgttgagtcttatgtttatgatatgcggaacaa 2057 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 528 caggaggttgaggattggctgtatgaagatggcgaggatgagactaagggagtctatgtt 587 ||||| |||||||||||| ||||||||||||| || |||||||| || || || |||||| Sbjct: 2122 caggaagttgaggattggttgtatgaagatggggaagatgagaccaaaggtgtttatgtt 2181 Query: 588 gc 589 || Sbjct: 2182 gc 2183 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 82 tggaagaggaggaagtggaagttccggt 109 |||||||||| ||||| ||||||||||| Sbjct: 1649 tggaagaggaagaagttgaagttccggt 1676
>ref|NM_001036228.1| Arabidopsis thaliana HSP91 AT1G79930 (HSP91) transcript variant AT1G79930.2 mRNA, complete cds Length = 3012 Score = 67.9 bits (34), Expect = 4e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 366 gagaaagaatatgaaatggctcttcaggacagagtgatggaagaaaccaaggacaagaaa 425 ||||| |||| ||| |||||| | || |||||||| |||||||| ||||||||| ||| Sbjct: 2004 gagaaggaatttgagatggctttgcaagacagagttatggaagagaccaaggaccggaag 2063 Query: 426 aattcagttgaggcttatgtttatgacatgcgtaacaa 463 ||| | |||||| ||||||||||||| ||||| ||||| Sbjct: 2064 aatgctgttgagtcttatgtttatgatatgcggaacaa 2101 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 528 caggaggttgaggattggctgtatgaagatggcgaggatgagactaagggagtctatgtt 587 ||||| |||||||||||| ||||||||||||| || |||||||| || || || |||||| Sbjct: 2166 caggaagttgaggattggttgtatgaagatggggaagatgagaccaaaggtgtttatgtt 2225 Query: 588 gc 589 || Sbjct: 2226 gc 2227 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 82 tggaagaggaggaagtggaagttccggt 109 |||||||||| ||||| ||||||||||| Sbjct: 1693 tggaagaggaagaagttgaagttccggt 1720
>gb|AY079015.1| Arabidopsis thaliana At1g79930/F19K16_11 mRNA, complete cds Length = 2798 Score = 67.9 bits (34), Expect = 4e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 366 gagaaagaatatgaaatggctcttcaggacagagtgatggaagaaaccaaggacaagaaa 425 ||||| |||| ||| |||||| | || |||||||| |||||||| ||||||||| ||| Sbjct: 1960 gagaaggaatttgagatggctttgcaagacagagttatggaagagaccaaggaccggaag 2019 Query: 426 aattcagttgaggcttatgtttatgacatgcgtaacaa 463 ||| | |||||| ||||||||||||| ||||| ||||| Sbjct: 2020 aatgctgttgagtcttatgtttatgatatgcggaacaa 2057 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 528 caggaggttgaggattggctgtatgaagatggcgaggatgagactaagggagtctatgtt 587 ||||| |||||||||||| ||||||||||||| || |||||||| || || || |||||| Sbjct: 2122 caggaagttgaggattggttgtatgaagatggggaagatgagaccaaaggtgtttatgtt 2181 Query: 588 gc 589 || Sbjct: 2182 gc 2183 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 82 tggaagaggaggaagtggaagttccggt 109 |||||||||| ||||| ||||||||||| Sbjct: 1649 tggaagaggaagaagttgaagttccggt 1676
>gb|BT002625.1| Arabidopsis thaliana At1g79930/F19K16_11 gene, complete cds Length = 2496 Score = 67.9 bits (34), Expect = 4e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 366 gagaaagaatatgaaatggctcttcaggacagagtgatggaagaaaccaaggacaagaaa 425 ||||| |||| ||| |||||| | || |||||||| |||||||| ||||||||| ||| Sbjct: 1810 gagaaggaatttgagatggctttgcaagacagagttatggaagagaccaaggaccggaag 1869 Query: 426 aattcagttgaggcttatgtttatgacatgcgtaacaa 463 ||| | |||||| ||||||||||||| ||||| ||||| Sbjct: 1870 aatgctgttgagtcttatgtttatgatatgcggaacaa 1907 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 528 caggaggttgaggattggctgtatgaagatggcgaggatgagactaagggagtctatgtt 587 ||||| |||||||||||| ||||||||||||| || |||||||| || || || |||||| Sbjct: 1972 caggaagttgaggattggttgtatgaagatggggaagatgagaccaaaggtgtttatgtt 2031 Query: 588 gc 589 || Sbjct: 2032 gc 2033 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 82 tggaagaggaggaagtggaagttccggt 109 |||||||||| ||||| ||||||||||| Sbjct: 1499 tggaagaggaagaagttgaagttccggt 1526
>gb|AC009322.1|AC009322 Arabidopsis thaliana chromosome I BAC F18B13 genomic sequence, complete sequence Length = 116905 Score = 67.9 bits (34), Expect = 4e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 366 gagaaagaatatgaaatggctcttcaggacagagtgatggaagaaaccaaggacaagaaa 425 ||||| |||| ||| |||||| | || |||||||| |||||||| ||||||||| ||| Sbjct: 1593 gagaaggaatttgagatggctttgcaagacagagttatggaagagaccaaggaccggaag 1534 Query: 426 aattcagttgaggcttatgtttatgacatgcgtaacaa 463 ||| | |||||| ||||||||||||| ||||| ||||| Sbjct: 1533 aatgctgttgagtcttatgtttatgatatgcggaacaa 1496 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 528 caggaggttgaggattggctgtatgaagatggcgaggatgagactaagggagtctatgtt 587 ||||| |||||||||||| ||||||||||||| || |||||||| || || || |||||| Sbjct: 1347 caggaagttgaggattggttgtatgaagatggggaagatgagaccaaaggtgtttatgtt 1288 Query: 588 gc 589 || Sbjct: 1287 gc 1286 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 82 tggaagaggaggaagtggaagttccggt 109 |||||||||| ||||| ||||||||||| Sbjct: 1988 tggaagaggaagaagttgaagttccggt 1961
>gb|AC153571.14| Mus musculus 10 BAC RP23-309H16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 184967 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 167 acaggaccctgcttctagtgctg 189 ||||||||||||||||||||||| Sbjct: 97731 acaggaccctgcttctagtgctg 97753
>ref|XM_417113.1| PREDICTED: Gallus gallus similar to Heat-shock protein 105 kDa (Heat shock 110 kDa protein) (Antigen NY-CO-25) (LOC418917), mRNA Length = 3791 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 543 tggctgtatgaagatggcgaggatga 568 |||||||||||||| ||||||||||| Sbjct: 2581 tggctgtatgaagagggcgaggatga 2606
>ref|XM_382126.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01950.1) partial mRNA Length = 2337 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 540 gattggctgtatgaagatggcgagga 565 ||||||||||| |||||||||||||| Sbjct: 2062 gattggctgtacgaagatggcgagga 2087
>gb|AC074348.6| Homo sapiens BAC clone RP11-678B3 from 7, complete sequence Length = 157511 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 278 atcaaaaaagaaagttaagaaaacaa 303 ||||||||||||| |||||||||||| Sbjct: 70066 atcaaaaaagaaaattaagaaaacaa 70091
>gb|AC146104.3| Pan troglodytes BAC clone RP43-21M20 from 7, complete sequence Length = 155910 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 278 atcaaaaaagaaagttaagaaaacaa 303 ||||||||||||| |||||||||||| Sbjct: 110531 atcaaaaaagaaaattaagaaaacaa 110506
>gb|AC155256.2| Mus musculus BAC clone RP24-142I9 from chromosome 12, complete sequence Length = 163949 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 281 aaaaaagaaagttaagaaaacaaatg 306 |||||||||||||||| ||||||||| Sbjct: 11323 aaaaaagaaagttaagcaaacaaatg 11298
>gb|AC012494.8| Homo sapiens BAC clone RP11-312P13 from 2, complete sequence Length = 191122 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 278 atcaaaaaagaaagttaagaaaacaa 303 ||||||||||||| |||||||||||| Sbjct: 158372 atcaaaaaagaaaattaagaaaacaa 158397
>gb|AC084481.1|CBRG02P14 Caenorhabditis briggsae cosmid G02P14, complete sequence Length = 43735 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 281 aaaaaagaaagttaagaaaaca 302 |||||||||||||||||||||| Sbjct: 39075 aaaaaagaaagttaagaaaaca 39096
>gb|AC128697.4| Mus musculus BAC clone RP24-388P9 from 12, complete sequence Length = 169780 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 281 aaaaaagaaagttaagaaaacaaatg 306 |||||||||||||||| ||||||||| Sbjct: 90719 aaaaaagaaagttaagcaaacaaatg 90694
>emb|AL670246.13| Mouse DNA sequence from clone RP23-2O18 on chromosome 4, complete sequence Length = 182187 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 352 tagagaaagctgttgagaaaga 373 |||||||||||||||||||||| Sbjct: 24540 tagagaaagctgttgagaaaga 24519
>gb|AC131747.5| Mus musculus BAC clone RP23-36O24 from chromosome 14, complete sequence Length = 212930 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 gatgctggaagaggaggaagt 97 ||||||||||||||||||||| Sbjct: 70195 gatgctggaagaggaggaagt 70215
>ref|XM_513540.1| PREDICTED: Pan troglodytes similar to kynurenine aminotransferase III (LOC456999), mRNA Length = 4467 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 gctggaagaggaggaagtgga 100 ||||||||||||||||||||| Sbjct: 1291 gctggaagaggaggaagtgga 1311
>ref|NM_019610.3| Homo sapiens RNA binding motif protein, X-linked-like 1 (RBMXL1), mRNA Length = 3877 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 gctggaagaggaggaagtgga 100 ||||||||||||||||||||| Sbjct: 820 gctggaagaggaggaagtgga 840
>gb|AC116326.5| Mus musculus BAC clone RP24-64C6 from chromosome 7, complete sequence Length = 181548 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 590 aaaactagaagaactgaaaaa 610 ||||||||||||||||||||| Sbjct: 2154 aaaactagaagaactgaaaaa 2134
>gb|AC124546.4| Mus musculus BAC clone RP23-273G17 from chromosome 12, complete sequence Length = 214438 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 280 caaaaaagaaagttaagaaaa 300 ||||||||||||||||||||| Sbjct: 208390 caaaaaagaaagttaagaaaa 208410
>ref|XM_535145.2| PREDICTED: Canis familiaris similar to coiled-coil domain containing 7 (LOC477958), mRNA Length = 1842 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 590 aaaactagaagaactgaaaaa 610 ||||||||||||||||||||| Sbjct: 603 aaaactagaagaactgaaaaa 623
>gb|AF039043.1| Caenorhabditis elegans cosmid F39C12, complete sequence Length = 40233 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 tggaagaggaggaagtggaag 102 ||||||||||||||||||||| Sbjct: 12184 tggaagaggaggaagtggaag 12164
>emb|AL139416.5| Human DNA sequence from clone RP4-531M19 on chromosome 1 Contains the 5' end of the gene for a novel protein (FLJ32614), the gene for a novel protein similar to X-linked RNA binding motif protein (RBMX) (DKFZp547N1117), the 3' end of the GBP3 gene for guanylate binding protein 3 and a CpG island, complete sequence Length = 34250 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 gctggaagaggaggaagtgga 100 ||||||||||||||||||||| Sbjct: 6377 gctggaagaggaggaagtgga 6357
>emb|AL832554.1|HSM803863 Homo sapiens mRNA; cDNA DKFZp547N1117 (from clone DKFZp547N1117) Length = 4857 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 gctggaagaggaggaagtgga 100 ||||||||||||||||||||| Sbjct: 800 gctggaagaggaggaagtgga 820
>gb|AC093694.4| Homo sapiens BAC clone RP11-769N3 from 4, complete sequence Length = 158566 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 382 tggctcttcaggacagagtga 402 ||||||||||||||||||||| Sbjct: 15354 tggctcttcaggacagagtga 15374
>gb|AC098475.2| Homo sapiens chromosome 3 clone RP11-611H7, complete sequence Length = 152945 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 272 tgagccatcaaaaaagaaagttaagaaaa 300 ||||| |||||||||| |||||||||||| Sbjct: 26659 tgagcaatcaaaaaaggaagttaagaaaa 26687
>gb|AC103558.2| Homo sapiens chromosome 3 clone RP11-46B13, complete sequence Length = 174539 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 272 tgagccatcaaaaaagaaagttaagaaaa 300 ||||| |||||||||| |||||||||||| Sbjct: 116970 tgagcaatcaaaaaaggaagttaagaaaa 116998
>gb|AC151837.4| Mus musculus BAC clone RP23-330A14 from chromosome 7, complete sequence Length = 209661 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 590 aaaactagaagaactgaaaaa 610 ||||||||||||||||||||| Sbjct: 51728 aaaactagaagaactgaaaaa 51708
>ref|NM_076424.2| Caenorhabditis elegans F39C12.1 (F39C12.1) mRNA, complete cds Length = 15429 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 tggaagaggaggaagtggaag 102 ||||||||||||||||||||| Sbjct: 4559 tggaagaggaggaagtggaag 4579
>gb|BC012942.1| Homo sapiens RNA binding motif protein, X-linked-like 1, mRNA (cDNA clone MGC:9398 IMAGE:3875565), complete cds Length = 3678 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 gctggaagaggaggaagtgga 100 ||||||||||||||||||||| Sbjct: 606 gctggaagaggaggaagtgga 626
>gb|AC153830.5| Mus musculus 10 BAC RP23-299H19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 200647 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 281 aaaaaagaaagttaagaaaac 301 ||||||||||||||||||||| Sbjct: 69305 aaaaaagaaagttaagaaaac 69285
>gb|AC124707.4| Mus musculus BAC clone RP24-73H16 from 12, complete sequence Length = 196237 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 280 caaaaaagaaagttaagaaaa 300 ||||||||||||||||||||| Sbjct: 15326 caaaaaagaaagttaagaaaa 15346
>gb|AC140947.1| Gallus gallus BAC clone TAM33-40B24 from chromosome ul, complete sequence Length = 229639 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 aaggctaaactgaagtgaaag 33 ||||||||||||||||||||| Sbjct: 134642 aaggctaaactgaagtgaaag 134662
>gb|DQ120655.1| Cercopithecus sabaeus RBM1 gene, partial cds Length = 1155 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 gctggaagaggaggaagtgga 100 ||||||||||||||||||||| Sbjct: 331 gctggaagaggaggaagtgga 351
>gb|DQ120654.1| Hylobates lar RBM1 gene, partial cds Length = 1155 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 gctggaagaggaggaagtgga 100 ||||||||||||||||||||| Sbjct: 331 gctggaagaggaggaagtgga 351
>gb|DQ120653.1| Pongo pygmaeus RBM1 gene, partial cds Length = 1155 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 gctggaagaggaggaagtgga 100 ||||||||||||||||||||| Sbjct: 331 gctggaagaggaggaagtgga 351
>gb|DQ120652.1| Gorilla gorilla RBM1 gene, partial cds Length = 1155 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 gctggaagaggaggaagtgga 100 ||||||||||||||||||||| Sbjct: 331 gctggaagaggaggaagtgga 351
>gb|DQ120651.1| Pan troglodytes RBM1 gene, partial cds Length = 1155 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 gctggaagaggaggaagtgga 100 ||||||||||||||||||||| Sbjct: 331 gctggaagaggaggaagtgga 351
>gb|DQ120650.1| Homo sapiens RBM1 gene, partial cds Length = 1152 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 gctggaagaggaggaagtgga 100 ||||||||||||||||||||| Sbjct: 331 gctggaagaggaggaagtgga 351
>emb|AL672127.9| Mouse DNA sequence from clone RP23-370O18 on chromosome X, complete sequence Length = 161908 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 280 caaaaaagaaagttaagaaaa 300 ||||||||||||||||||||| Sbjct: 120105 caaaaaagaaagttaagaaaa 120085
>ref|NM_111378.2| Arabidopsis thaliana DNA binding AT3G05060 mRNA, complete cds Length = 2002 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 gagccatcaaaaaagaaagttaagaaaa 300 ||||||||||| ||||||| |||||||| Sbjct: 1450 gagccatcaaagaagaaagataagaaaa 1477
>gb|AY726636.1| Xenopus laevis Brg1 mRNA, complete cds Length = 5031 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ggaagaggaggaagtggaag 102 |||||||||||||||||||| Sbjct: 4682 ggaagaggaggaagtggaag 4701
>gb|AF030694.2| Plasmodium falciparum strain Dd2 heat shock protein 86 (HSP86), O1 (o1), O3 (o3), O2 (o2), CG8 (cg8), CG4 (cg4), CG3 (cg3), putative chloroquine resistance transporter (crt), CG9 (cg9), CG1 (cg1), CG6 (cg6), CG2 (cg2), and CG7 (cg7) genes, complete cds Length = 47573 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 aaaaaagaaagttaagaaaa 300 |||||||||||||||||||| Sbjct: 17367 aaaaaagaaagttaagaaaa 17386
>gb|AC122117.10| Mus musculus chromosome 18, clone RP23-61O22, complete sequence Length = 207024 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 gacaagaaaaattcagttga 436 |||||||||||||||||||| Sbjct: 167612 gacaagaaaaattcagttga 167631
>gb|AY723745.1| Hepatitis E virus isolate IND-SW-00-01, complete genome Length = 7262 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 catctatgagtgaggtgcca 131 |||||||||||||||||||| Sbjct: 3330 catctatgagtgaggtgcca 3311
>gb|AC091806.4| Homo sapiens chromosome X clone RP11-320G24 map p11.4, complete sequence Length = 182440 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 caaaaaagaaagttaagaaa 299 |||||||||||||||||||| Sbjct: 112407 caaaaaagaaagttaagaaa 112388
>gb|AC091809.4| Homo sapiens chromosome X clone XXbac-11940 map p11.4, complete sequence Length = 218733 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 caaaaaagaaagttaagaaa 299 |||||||||||||||||||| Sbjct: 181321 caaaaaagaaagttaagaaa 181302
>gb|BC053257.1| Danio rerio zgc:64113, mRNA (cDNA clone MGC:64113 IMAGE:6795259), complete cds Length = 1775 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 277 catcaaaaaagaaagttaagaaaa 300 ||||||||||||||| |||||||| Sbjct: 225 catcaaaaaagaaagataagaaaa 248
>ref|XM_954628.1| Neurospora crassa OR74A hypothetical protein (NCU02401.1) partial mRNA Length = 2124 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 550 atgaagatggcgaggatgag 569 |||||||||||||||||||| Sbjct: 514 atgaagatggcgaggatgag 495
>ref|XM_331176.1| Neurospora crassa OR74A hypothetical protein (NCU02401.1) partial mRNA Length = 2124 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 550 atgaagatggcgaggatgag 569 |||||||||||||||||||| Sbjct: 514 atgaagatggcgaggatgag 495
>ref|NM_011546.1| Mus musculus zinc finger homeobox 1a (Zfhx1a), mRNA Length = 5214 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ggaagaggaggaagtggaag 102 |||||||||||||||||||| Sbjct: 3193 ggaagaggaggaagtggaag 3212
>gb|AY339371.1| Rattus norvegicus ASB15 mRNA, partial cds Length = 437 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 gatcctgctgaggctgctgctgaa 215 |||| ||||||||||||||||||| Sbjct: 357 gatcatgctgaggctgctgctgaa 380
>emb|CT010522.7| Mouse DNA sequence from clone RP23-310H3 on chromosome 16, complete sequence Length = 169798 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 aggtgagaaggctaaactga 25 |||||||||||||||||||| Sbjct: 44260 aggtgagaaggctaaactga 44241
>ref|XM_445611.1| Candida glabrata CBS138, CAGL0D04510g partial mRNA Length = 7443 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 277 catcaaaaaagaaagttaagaaaa 300 |||||||| ||||||||||||||| Sbjct: 2234 catcaaaagagaaagttaagaaaa 2257
>gb|AC134834.3| Mus musculus BAC clone RP24-320P15 from chromosome 18, complete sequence Length = 169143 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 ggaagaggaggaagtggaag 102 |||||||||||||||||||| Sbjct: 163888 ggaagaggaggaagtggaag 163869
>gb|AC138619.4| Mus musculus BAC clone RP23-278M16 from chromosome 18, complete sequence Length = 170250 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ggaagaggaggaagtggaag 102 |||||||||||||||||||| Sbjct: 53585 ggaagaggaggaagtggaag 53604
>gb|AC009177.7|ATAC009177 Arabidopsis thaliana chromosome III BAC T12H1 genomic sequence, complete sequence Length = 140064 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 273 gagccatcaaaaaagaaagttaagaaaa 300 ||||||||||| ||||||| |||||||| Sbjct: 9420 gagccatcaaagaagaaagataagaaaa 9393
>emb|Z81126.2|CET22E6 Caenorhabditis elegans Cosmid T22E6, complete sequence Length = 13219 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 caaaaaagaaagttaagaaa 299 |||||||||||||||||||| Sbjct: 9825 caaaaaagaaagttaagaaa 9806
>gb|AC111103.7| Mus musculus chromosome 16, clone RP23-187G7, complete sequence Length = 222348 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 aggtgagaaggctaaactga 25 |||||||||||||||||||| Sbjct: 72549 aggtgagaaggctaaactga 72568
>gb|AC123571.8| Medicago truncatula clone mth1-14n3, complete sequence Length = 84556 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 gaaagttaagaaaacaaatg 306 |||||||||||||||||||| Sbjct: 62849 gaaagttaagaaaacaaatg 62868 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 gaaagttaagaaaacaaatg 306 |||||||||||||||||||| Sbjct: 59675 gaaagttaagaaaacaaatg 59694
>gb|AC146721.7| Medicago truncatula clone mth2-145n10, complete sequence Length = 133097 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 caaggacaagaaaaattcag 432 |||||||||||||||||||| Sbjct: 107673 caaggacaagaaaaattcag 107654
>emb|AL390729.23| Human DNA sequence from clone RP3-522D1 on chromosome 1 Contains the 5' end of a novel gene, a novel gene, a ribosomal protein L39 (RPL39) pseudogene and a CpG island, complete sequence Length = 69656 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 587 tgcaaaactagaagaactgaaaaa 610 ||||||||| |||||||||||||| Sbjct: 33777 tgcaaaactcgaagaactgaaaaa 33754
>emb|AL354996.9| Human DNA sequence from clone RP11-478H12 on chromosome 13, complete sequence Length = 54981 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 aggtgagaaggctaaactga 25 |||||||||||||||||||| Sbjct: 34328 aggtgagaaggctaaactga 34347
>emb|AL121834.20|HSJ509I19 Human DNA sequence from clone RP3-509I19 on chromosome 6q23.1-24.1 Contains a novel gene (includes DKFZP586D0623), the gene for a novel protein similar to mouse f-box only protein 16 (Fbxo16) (Fbx16), a novel 7 transmembrane receptor (rhodopsin family) pseudogene similar to CCRL1, a novel gene, a suppressor of mif two 3 homolog 2 (yeast) (SMT3H2) pseudogene, the REPS1 gene for RALBP1 associated Eps domain containing 1 and two CpG islands, complete sequence Length = 178159 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 469 atgagaagtacaatgattttgtcatgtc 496 |||||||||||| ||||||||| ||||| Sbjct: 37395 atgagaagtacattgattttgtaatgtc 37422
>emb|AL133355.13| Human DNA sequence from clone RP11-541N10 on chromosome 10 Contains the 5' end of the SH3MD1 gene for SH3 multiple domains 1, a novel gene and two CpG islands, complete sequence Length = 190882 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 404 ggaagaaaccaaggacaagaaaaa 427 |||||||||||||| ||||||||| Sbjct: 128907 ggaagaaaccaaggccaagaaaaa 128930
>emb|AL096863.13|HS1119I23 Human DNA sequence from clone RP5-1119I23 on chromosome 10, complete sequence Length = 98818 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 280 caaaaaagaaagttaagaaaacaa 303 ||||||||||| |||||||||||| Sbjct: 51168 caaaaaagaaaattaagaaaacaa 51145
>gb|AC157904.3| Mus musculus chromosome 18, clone RP23-379G12, complete sequence Length = 182922 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 gacaagaaaaattcagttga 436 |||||||||||||||||||| Sbjct: 3090 gacaagaaaaattcagttga 3109
>gb|AC104574.4| Homo sapiens chromosome 15, clone RP11-259A24, complete sequence Length = 152130 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 aaagaaagttaagaaaacaa 303 |||||||||||||||||||| Sbjct: 142505 aaagaaagttaagaaaacaa 142524
>emb|CR380950.1| Candida glabrata strain CBS138 chromosome D complete sequence Length = 651701 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 277 catcaaaaaagaaagttaagaaaa 300 |||||||| ||||||||||||||| Sbjct: 442313 catcaaaagagaaagttaagaaaa 442336
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 ctctcttgaatcagcaacga 78 |||||||||||||||||||| Sbjct: 982990 ctctcttgaatcagcaacga 982971
>gb|BC097405.1| Rattus norvegicus similar to ankyrin repeat domain-containing SOCS box protein Asb-15, mRNA (cDNA clone IMAGE:7453988), partial cds Length = 1534 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 gatcctgctgaggctgctgctgaa 215 |||| ||||||||||||||||||| Sbjct: 1352 gatcatgctgaggctgctgctgaa 1375
>emb|AL592465.8| Mouse DNA sequence from clone RP23-36C4 on chromosome 11 Contains the Tbx4 gene for T-box 4, a ribosomal protein L21 (Rpl21) pseudogene and the 3' end of the Brip1 gene for BRCA1 interacting protein C-terminal helicase 1, complete sequence Length = 238358 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 atggaagaaaccaaggacaagaaaaatt 429 ||||||||||| ||| |||||||||||| Sbjct: 55117 atggaagaaactaagaacaagaaaaatt 55090
>gb|AC021542.8| Homo sapiens chromosome 15, clone RP11-507B12, complete sequence Length = 80114 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 aaagaaagttaagaaaacaa 303 |||||||||||||||||||| Sbjct: 28640 aaagaaagttaagaaaacaa 28621
>gb|AC055782.9| Homo sapiens chromosome 15, clone RP11-528P19, complete sequence Length = 172697 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 280 caaaaaagaaagttaagaaaacaa 303 ||||||||||| |||||||||||| Sbjct: 100012 caaaaaagaaaattaagaaaacaa 99989
>gb|AC022254.11| Homo sapiens chromosome 15, clone RP11-282M16, complete sequence Length = 188601 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 280 caaaaaagaaagttaagaaaacaa 303 ||||||||||| |||||||||||| Sbjct: 14055 caaaaaagaaaattaagaaaacaa 14078
>gb|AC022145.8| Homo sapiens chromosome 19 clone CTD-2579N5, complete sequence Length = 174994 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ctcaacatccatgggatagt 58 |||||||||||||||||||| Sbjct: 115638 ctcaacatccatgggatagt 115657
>gb|AC104635.12| Homo sapiens 3 BAC RP11-567G11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 66672 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 aggtgagaaggctaaactga 25 |||||||||||||||||||| Sbjct: 27372 aggtgagaaggctaaactga 27353
>gb|AC010617.8| Homo sapiens chromosome 19 clone CTD-2607J13, complete sequence Length = 101166 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 ctcaacatccatgggatagt 58 |||||||||||||||||||| Sbjct: 33935 ctcaacatccatgggatagt 33916
>gb|AC012295.20| Mus musculus chromosome 11, clone RP23-48A17, complete sequence Length = 187364 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 atggaagaaaccaaggacaagaaaaatt 429 ||||||||||| ||| |||||||||||| Sbjct: 108561 atggaagaaactaagaacaagaaaaatt 108534
>gb|AC084768.4| Homo sapiens chromosome 8, clone RP11-281H11, complete sequence Length = 173677 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 agaggaggaagtggaagttc 105 |||||||||||||||||||| Sbjct: 28378 agaggaggaagtggaagttc 28397
>ref|NM_169658.2| Drosophila melanogaster Ataxin-2 CG5166-RC, transcript variant C (Atx2), mRNA Length = 5020 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 cctgctgaggctgctgctga 214 |||||||||||||||||||| Sbjct: 2078 cctgctgaggctgctgctga 2059
>ref|NM_169657.1| Drosophila melanogaster Ataxin-2 CG5166-RB, transcript variant B (Atx2), mRNA Length = 5690 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 cctgctgaggctgctgctga 214 |||||||||||||||||||| Sbjct: 2748 cctgctgaggctgctgctga 2729
>ref|NM_142209.2| Drosophila melanogaster Ataxin-2 CG5166-RA, transcript variant A (Atx2), mRNA Length = 5149 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 cctgctgaggctgctgctga 214 |||||||||||||||||||| Sbjct: 2078 cctgctgaggctgctgctga 2059
>gb|AC104444.2| Homo sapiens chromosome 3 clone RP11-420K5, complete sequence Length = 161054 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 aggtgagaaggctaaactga 25 |||||||||||||||||||| Sbjct: 32348 aggtgagaaggctaaactga 32367
>gb|AC005662.3| Arabidopsis thaliana chromosome 2 clone F13H10 map CIC11C08, complete sequence Length = 96066 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 aaaaaagaaagttaagaaaacaaa 304 ||||||||| |||||||||||||| Sbjct: 28125 aaaaaagaatgttaagaaaacaaa 28148
>gb|AY095516.1| Drosophila melanogaster GH13857 full insert cDNA Length = 4303 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 cctgctgaggctgctgctga 214 |||||||||||||||||||| Sbjct: 2513 cctgctgaggctgctgctga 2494
>gb|AC022540.9| Homo sapiens chromosome 10 clone RP11-46O21, complete sequence Length = 71736 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 282 aaaaagaaagttaagaaaacaaat 305 ||||||||| |||||||||||||| Sbjct: 7262 aaaaagaaaattaagaaaacaaat 7239
>dbj|AK154720.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630104H16 product:sepiapterin reductase, full insert sequence Length = 3551 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 ggaagaggaggaagtggaag 102 |||||||||||||||||||| Sbjct: 3347 ggaagaggaggaagtggaag 3328
>gb|AC074120.9| Homo sapiens BAC clone RP11-724M22 from 4, complete sequence Length = 150013 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 aaaaaagaaagttaagaaaa 300 |||||||||||||||||||| Sbjct: 141098 aaaaaagaaagttaagaaaa 141117
>gb|AC093581.2| Homo sapiens chromosome 1 clone RP11-22M7, complete sequence Length = 156992 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 aggtgagaaggctaaactga 25 |||||||||||||||||||| Sbjct: 77712 aggtgagaaggctaaactga 77693
>gb|AY060573.1| Arabidopsis thaliana AT3g05060/T12H1_2 mRNA sequence Length = 1520 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 gagccatcaaaaaagaaagttaagaaaa 300 ||||||||||| ||||||| |||||||| Sbjct: 1450 gagccatcaaagaagaaagataagaaaa 1477
>gb|AY058253.1| Drosophila melanogaster GH01409 full length cDNA Length = 4350 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 cctgctgaggctgctgctga 214 |||||||||||||||||||| Sbjct: 2078 cctgctgaggctgctgctga 2059
>gb|AF412080.1|AF412080 Arabidopsis thaliana AT3g05060/T12H1_2 mRNA, complete cds Length = 1873 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 gagccatcaaaaaagaaagttaagaaaa 300 ||||||||||| ||||||| |||||||| Sbjct: 1442 gagccatcaaagaagaaagataagaaaa 1469
>dbj|AK220645.1| Arabidopsis thaliana mRNA for putative SAR DNA-binding protein-1, partial cds, clone: RAFL21-62-I11 Length = 373 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 gagccatcaaaaaagaaagttaagaaaa 300 ||||||||||| ||||||| |||||||| Sbjct: 21 gagccatcaaagaagaaagataagaaaa 48
>emb|BX950183.9| Zebrafish DNA sequence from clone DKEY-28C2 in linkage group 20, complete sequence Length = 200179 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 277 catcaaaaaagaaagttaagaaaa 300 ||||||||||||||| |||||||| Sbjct: 151403 catcaaaaaagaaagataagaaaa 151426
>dbj|AK077901.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030430B05 product:zinc finger homeobox 1a, full insert sequence Length = 1651 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ggaagaggaggaagtggaag 102 |||||||||||||||||||| Sbjct: 466 ggaagaggaggaagtggaag 485
>gb|AY762376.1| Xenopus laevis Brg1 (Brg1) mRNA, complete cds Length = 5487 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ggaagaggaggaagtggaag 102 |||||||||||||||||||| Sbjct: 4695 ggaagaggaggaagtggaag 4714
>ref|XM_392809.2| PREDICTED: Apis mellifera similar to CG6253-PA (LOC409290), mRNA Length = 514 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 aaaaaagaaagttaagaaaacaaa 304 ||||||||||| |||||||||||| Sbjct: 421 aaaaaagaaagctaagaaaacaaa 444
>gb|AC020892.7|AC020892 Homo sapiens chromosome 15 clone RP11-313P18 map 15q21.2, complete sequence Length = 186253 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 aaaaaagaaagttaagaaaacaaa 304 |||||||||| ||||||||||||| Sbjct: 80743 aaaaaagaaatttaagaaaacaaa 80766
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 aaaaaagaaagttaagaaaa 300 |||||||||||||||||||| Sbjct: 8328785 aaaaaagaaagttaagaaaa 8328804
>gb|AC016993.4|AC016993 Homo sapiens clone RP11-18J9, complete sequence Length = 172241 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 282 aaaaagaaagttaagaaaacaaat 305 ||||||||| |||||||||||||| Sbjct: 112123 aaaaagaaaattaagaaaacaaat 112100
>gb|AC096736.3| Homo sapiens BAC clone RP11-171N4 from 4, complete sequence Length = 172989 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 aaaccaaggacaagaaaaat 428 |||||||||||||||||||| Sbjct: 28203 aaaccaaggacaagaaaaat 28184
>gb|AC007769.3|AC007769 Drosophila melanogaster, chromosome 3R, region 88F-88F, BAC clone BACR17K19, complete sequence Length = 167918 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 cctgctgaggctgctgctga 214 |||||||||||||||||||| Sbjct: 73378 cctgctgaggctgctgctga 73359
>ref|NM_198810.1| Danio rerio zgc:64113 (zgc:64113), mRNA Length = 1775 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 277 catcaaaaaagaaagttaagaaaa 300 ||||||||||||||| |||||||| Sbjct: 225 catcaaaaaagaaagataagaaaa 248
>gb|AC133183.3| Mus musculus BAC clone RP24-185O19 from chromosome 12, complete sequence Length = 182948 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 ggaagaggaggaagtggaag 102 |||||||||||||||||||| Sbjct: 131545 ggaagaggaggaagtggaag 131526
>gb|AF302491.1|AF302491 Arabidopsis thaliana NOP58-like protein mRNA, complete cds Length = 1602 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 gagccatcaaaaaagaaagttaagaaaa 300 ||||||||||| ||||||| |||||||| Sbjct: 1357 gagccatcaaagaagaaagataagaaaa 1384
>gb|AC012001.6| Homo sapiens BAC clone RP11-465G21 from 2, complete sequence Length = 151336 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 272 tgagccatcaaaaaagaaagttaagaaaacaa 303 |||||||||| |||| ||| |||||||||||| Sbjct: 105280 tgagccatcagaaaataaaattaagaaaacaa 105311
>gb|AC004944.1|AC004944 Homo sapiens PAC clone RP5-991O23 from 8, complete sequence Length = 133258 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 agaggaggaagtggaagttc 105 |||||||||||||||||||| Sbjct: 117230 agaggaggaagtggaagttc 117249
>dbj|AP003237.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0046E05 Length = 162776 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 432 gttgaggcttatgtttatgacatg 455 ||||||||||||||| |||||||| Sbjct: 56606 gttgaggcttatgttgatgacatg 56583
>ref|XM_216108.3| PREDICTED: Rattus norvegicus ankyrin repeat and SOCS box-containing protein 15 (Asb15), mRNA Length = 1313 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 gatcctgctgaggctgctgctgaa 215 |||| ||||||||||||||||||| Sbjct: 843 gatcatgctgaggctgctgctgaa 866
>gb|AC092058.3| Homo sapiens chromosome 3 clone RP11-667E17, complete sequence Length = 200898 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 aggtgagaaggctaaactga 25 |||||||||||||||||||| Sbjct: 43101 aggtgagaaggctaaactga 43082
>gb|AC132808.2| Homo sapiens chromosome 3 clone RP11-794P9, complete sequence Length = 195741 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 aggaaaaaactgttccaatg 254 |||||||||||||||||||| Sbjct: 90340 aggaaaaaactgttccaatg 90321
>gb|AC073895.22| Homo sapiens 3 BAC RP11-622L21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167311 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 aggtgagaaggctaaactga 25 |||||||||||||||||||| Sbjct: 40839 aggtgagaaggctaaactga 40858
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 gtgatggaagaaaccaaggacaag 422 ||||||||||||||| |||||||| Sbjct: 128726 gtgatggaagaaacctaggacaag 128703
>dbj|AP005527.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0603C10 Length = 187620 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 aaaaaagaaagttaagaaaa 300 |||||||||||||||||||| Sbjct: 122290 aaaaaagaaagttaagaaaa 122309
>gb|AY810111.1| Schistosoma japonicum clone SJCHGC01882 unknown mRNA Length = 627 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 agaaagttaagaaaacaaat 305 |||||||||||||||||||| Sbjct: 380 agaaagttaagaaaacaaat 399
>emb|BX927241.19| Zebrafish DNA sequence from clone DKEY-184P18 in linkage group 19, complete sequence Length = 140932 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 tcaaaaaagaaagttaagaa 298 |||||||||||||||||||| Sbjct: 93631 tcaaaaaagaaagttaagaa 93612
>gb|AC078927.20| Homo sapiens 12 BAC RP11-745O10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 125777 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 aaagaaagttaagaaaacaa 303 |||||||||||||||||||| Sbjct: 43852 aaagaaagttaagaaaacaa 43833
>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome Length = 1884661 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 atgacatgcgtaacaagatt 467 |||||||||||||||||||| Sbjct: 1614897 atgacatgcgtaacaagatt 1614878
>gb|AC115762.9| Mus musculus chromosome 8, clone RP23-64E18, complete sequence Length = 222394 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 aaaaaagaaagttaagaaaacaaa 304 |||||||||||| ||||||||||| Sbjct: 105730 aaaaaagaaagtaaagaaaacaaa 105753
>gb|AE003708.3| Drosophila melanogaster chromosome 3R, section 46 of 118 of the complete sequence Length = 236375 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 cctgctgaggctgctgctga 214 |||||||||||||||||||| Sbjct: 217716 cctgctgaggctgctgctga 217697
>emb|CR759951.21| Zebrafish DNA sequence from clone DKEY-256E7 in linkage group 1, complete sequence Length = 120721 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 277 catcaaaaaagaaagttaagaaaa 300 ||||||||||||||| |||||||| Sbjct: 62188 catcaaaaaagaaagataagaaaa 62165
>emb|AL935325.14| Mouse DNA sequence from clone RP23-101O16 on chromosome 4, complete sequence Length = 133845 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 411 accaaggacaagaaaaattcagtt 434 |||||||||| ||||||||||||| Sbjct: 18944 accaaggacaggaaaaattcagtt 18967
>emb|BX510358.4| Mouse DNA sequence from clone RP23-78G10 on chromosome X, complete sequence Length = 60208 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 aaaaaagaaagttaagaaaa 300 |||||||||||||||||||| Sbjct: 26836 aaaaaagaaagttaagaaaa 26855
>emb|Z34801.1|CEF59A2 Caenorhabditis elegans Cosmid F59A2, complete sequence Length = 25400 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 cacgagattctgaggaaaaa 242 |||||||||||||||||||| Sbjct: 4966 cacgagattctgaggaaaaa 4947
>gb|BT001340.1| Drosophila melanogaster AT22221 full insert cDNA Length = 3192 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 cctgctgaggctgctgctga 214 |||||||||||||||||||| Sbjct: 1555 cctgctgaggctgctgctga 1536
>gb|AC153373.4| Mus musculus 6 BAC RP23-100J14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 218409 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 279 tcaaaaaagaaagttaagaaaacaaatg 306 |||||||||||| |||||||||||||| Sbjct: 113351 tcaaaaaagaaacataagaaaacaaatg 113378 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 ggaagaggaggaagtggaag 102 |||||||||||||||||||| Sbjct: 40625 ggaagaggaggaagtggaag 40606
>emb|AL133224.4|CNS01DU9 Human chromosome 14 DNA sequence BAC R-16G17 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 187385 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 aggtgagaaggctaaactga 25 |||||||||||||||||||| Sbjct: 97150 aggtgagaaggctaaactga 97131
>gb|AC153605.2| Mus musculus 6 BAC RP23-346H23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 229744 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ggaagaggaggaagtggaag 102 |||||||||||||||||||| Sbjct: 13634 ggaagaggaggaagtggaag 13653
>emb|AL611952.9| Mouse DNA sequence from clone RP23-70K18 on chromosome 4, complete sequence Length = 89500 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 ggaagaggaggaagtggaag 102 |||||||||||||||||||| Sbjct: 26901 ggaagaggaggaagtggaag 26882
>gb|U26259.1|MMU26259 Mus musculus C2-H2 zinc finger protein mRNA, complete cds Length = 5237 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ggaagaggaggaagtggaag 102 |||||||||||||||||||| Sbjct: 3210 ggaagaggaggaagtggaag 3229
>dbj|D76432.1| Mouse mRNA for transcriptional repressor deltaEF1, complete cds Length = 5214 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ggaagaggaggaagtggaag 102 |||||||||||||||||||| Sbjct: 3193 ggaagaggaggaagtggaag 3212 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,628,773 Number of Sequences: 3902068 Number of extensions: 7628773 Number of successful extensions: 187657 Number of sequences better than 10.0: 150 Number of HSP's better than 10.0 without gapping: 151 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 186936 Number of HSP's gapped (non-prelim): 714 length of query: 636 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 613 effective length of database: 17,143,297,704 effective search space: 10508841492552 effective search space used: 10508841492552 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
