ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags29h17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467336.1| Oryza sativa (japonica cultivar-group), mRNA 545 e-152
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 545 e-152
3dbj|AP004052.3| Oryza sativa (japonica cultivar-group) genomic D... 545 e-152
4gb|AC147618.3| Mus musculus chromosome 19 clone RP24-245M20, com... 44 0.63
5gb|AC128739.4| Mus musculus BAC clone RP24-168G14 from chromosom... 44 0.63
6gb|AC126695.4| Mus musculus BAC clone RP23-313D2 from 18, comple... 44 0.63
7ref|NM_001030995.1| Gallus gallus serine/threonine kinase 17a (a... 42 2.5
8emb|AL669983.2| Human DNA sequence from clone RP11-220D10 on chr... 42 2.5
9emb|AL663078.8| Mouse DNA sequence from clone RP23-440P13 on chr... 42 2.5
10emb|AJ719290.1| Gallus gallus mRNA for hypothetical protein, clo... 42 2.5
11gb|AC093484.2| Homo sapiens chromosome , clone RP11-138I1, compl... 42 2.5
12ref|NM_127144.2| Arabidopsis thaliana endonuclease AT2G15820 mRN... 40 9.8
13gb|AC149290.1| Solanum demissum chromosome 5 clone PGEC093P17 ma... 40 9.8
14gb|AC116472.14| Mus musculus chromosome 7, clone RP23-384B23, co... 40 9.8
15gb|AC155298.2| Mus musculus BAC clone RP24-245L7 from chromosome... 40 9.8
16gb|AC122746.7| Mus musculus chromosome 17, clone RP23-144A20, co... 40 9.8
17gb|AC150307.3| Rhinolophus ferrumequinum clone VMRC7-71A7, compl... 40 9.8
18gb|AC116480.10| Mus musculus chromosome 12, clone RP23-398M9, co... 40 9.8
19gb|AC099413.3| Mus musculus BAC clone RP23-2O10 from 4, complete... 40 9.8
20ref|XM_650464.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 9.8
21gb|AC003985.2| Homo sapiens PAC clone RP5-978I12 from 7, complet... 40 9.8
22emb|AL590036.11| Human DNA sequence from clone RP11-379D21 on ch... 40 9.8
23gb|AY056274.1| Arabidopsis thaliana unknown protein (At2g15820) ... 40 9.8
24emb|X04961.1|GGHSP108 Hen gene for steroid inducible 108K heat s... 40 9.8
25emb|AL713919.11| Mouse DNA sequence from clone RP23-41F14 on chr... 40 9.8
26gb|AC157542.11| Mus musculus chromosome 1, clone RP23-115I1, com... 40 9.8
27gb|AC117458.3| Homo sapiens 3 BAC RP11-345M4 (Roswell Park Cance... 40 9.8
28gb|AC006438.4| Arabidopsis thaliana chromosome 2 clone F19G14 ma... 40 9.8
29gb|AC099674.2| Homo sapiens chromosome 1 clone RP11-143H12, comp... 40 9.8
30gb|AC104837.2| Homo sapiens chromosome 1 clone RP4-641G12, compl... 40 9.8
31dbj|AK163902.1| Mus musculus 0 day neonate cerebellum cDNA, RIKE... 40 9.8
32gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 40 9.8
33gb|AC121569.4| Mus musculus BAC clone RP23-228C13 from chromosom... 40 9.8
34dbj|AK034307.1| Mus musculus adult male diencephalon cDNA, RIKEN... 40 9.8
35gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold 40 9.8
36gb|AC155947.8| Mus musculus 6 BAC RP24-417N21 (Roswell Park Canc... 40 9.8
37gb|AC153374.5| Mus musculus 6 BAC RP23-281H4 (Roswell Park Cance... 40 9.8
38gb|AC124991.14| Mus musculus chromosome 12, clone RP23-138M19, c... 40 9.8
39gb|BT020586.1| Arabidopsis thaliana At2g15820 gene, complete cds 40 9.8
40gb|AC171013.3| Gallus gallus BAC clone CH261-71N5 from chromosom... 40 9.8
41gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1... 40 9.8
42gb|AC135469.4| Mus musculus BAC clone RP24-406G8 from 13, comple... 40 9.8
43gb|AC124490.4| Mus musculus BAC clone RP23-453I1 from 16, comple... 40 9.8
44emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB1... 40 9.8
45emb|AL672274.7| Mouse DNA sequence from clone RP23-351G20 on chr... 40 9.8
46emb|AL772320.12| Mouse DNA sequence from clone RP23-346F2 on chr... 40 9.8
47emb|AL671895.9| Mouse DNA sequence from clone RP23-342E4 on chro... 40 9.8
48emb|AL671905.4| Mouse DNA sequence from clone RP23-239H22 on chr... 40 9.8 
>ref|XM_467336.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2373

 Score =  545 bits (275), Expect = e-152
 Identities = 595/701 (84%), Gaps = 3/701 (0%)
 Strand = Plus / Plus

                                                                        
Query: 13   ataattgagataatggcaaatgctaaggagatagatgttgcggaacaacttatggatgaa 72
            ||||||||||||||| |||| |||  |||  ||||| | | ||||||||||||| |||||
Sbjct: 1231 ataattgagataatgacaaaagctctggaagtagatatcgtggaacaacttatgaatgaa 1290

                                                                        
Query: 73   ttttctgagagccatatgaagcatttgatgccagcatttcttgccctgatgtacatgtac 132
            |||  ||||||  |||||||||||||||||||||| || |||| | ||||||||||||||
Sbjct: 1291 tttattgagagtgatatgaagcatttgatgccagccttccttgacttgatgtacatgtac 1350

                                                                        
Query: 133  ttggatcttgatatgcatgagaaattagaactaacattctcgaaatgccttgctaggtgc 192
             ||||||| ||||||||||| || |||||| |||||||||  |||||| | || ||||||
Sbjct: 1351 atggatctggatatgcatgaaaagttagaattaacattcttaaaatgcatagccaggtgc 1410

                                                                        
Query: 193  cgtccaaatagaatcttgtacaccatctatctagaatcacagataagggctgggaatgtt 252
            |||||||| ||||| ||||||||||| ||||| |||||||   ||| || ||| ||| | 
Sbjct: 1411 cgtccaaacagaatattgtacaccatttatctggaatcactagtaaaggttggaaatatc 1470

                                                                        
Query: 253  gagaaagctgaggaggtcttcaatgaaatgcacaaaaaagggacgataggtactaacgca 312
            ||||| ||||||||||| ||   |||||||||||| || |||| ||||||||||||| | 
Sbjct: 1471 gagaaggctgaggaggtatttggtgaaatgcacaataatgggatgataggtactaacacg 1530

                                                                        
Query: 313  aagtcttgcaacatcatgctaagaggttatatttctgtagaagactatcagaaagctgaa 372
            ||||| |||||||| ||||||||||||||| |||||| |||||||||||||||||| |||
Sbjct: 1531 aagtcgtgcaacattatgctaagaggttatctttctgcagaagactatcagaaagccgaa 1590

                                                                        
Query: 373  aaggtttatgatatgatgtgtaaaaagaagtatgatgtacaggaggatttgttggaagaa 432
            |||||||||||||||||| |||||||||| |||||||||||||  || |  |||||| | 
Sbjct: 1591 aaggtttatgatatgatgagtaaaaagaaatatgatgtacaggcagactctttggaaaag 1650

                                                                        
Query: 433  cttcagactggtctccgtcttggtaagaaagtcgctgttaagccaaaacccgtgagcatg 492
            || || | |||||||| |||    ||||||||   | |||| |||||| | |||||||||
Sbjct: 1651 ctccaaagtggtctccttctcaacaagaaagt---tattaaaccaaaaactgtgagcatg 1707

                                                                        
Query: 493  aaattggatcaagagcagcgtgagattttgattggttttcttctgggaggcacacagatt 552
            ||  ||||||||||||||||||| ||||| |||||||| |||||||||||||| |  || 
Sbjct: 1708 aagctggatcaagagcagcgtgaaattttaattggtttgcttctgggaggcactcgaatg 1767

                                                                        
Query: 553  gaatctcatgcacagagaggggttcacattgtccattttaagttccaggaatattccgat 612
            |||||| |||||||| ||||||| || ||||| || ||| ||||||||||| ||||| ||
Sbjct: 1768 gaatcttatgcacagcgaggggtccatattgtgcactttcagttccaggaagattccaat 1827

                                                                        
Query: 613  gcccattcggtcttaagggtgcacattcatgagcgtttctttgaatggctgacttcagca 672
            || ||||| || |||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 1828 gctcattcagttttaagggtgcacattcatgagcgtttctttgaatggttgtcttcagca 1887

                                                     
Query: 673  agcagatcatttgatgatgagagcaagataccttatgagtt 713
            ||||||||||| ||||||| |||||||||||| ||| ||||
Sbjct: 1888 agcagatcattcgatgatgggagcaagataccctatcagtt 1928
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  545 bits (275), Expect = e-152
 Identities = 595/701 (84%), Gaps = 3/701 (0%)
 Strand = Plus / Plus

                                                                            
Query: 13       ataattgagataatggcaaatgctaaggagatagatgttgcggaacaacttatggatgaa 72
                ||||||||||||||| |||| |||  |||  ||||| | | ||||||||||||| |||||
Sbjct: 28938108 ataattgagataatgacaaaagctctggaagtagatatcgtggaacaacttatgaatgaa 28938167

                                                                            
Query: 73       ttttctgagagccatatgaagcatttgatgccagcatttcttgccctgatgtacatgtac 132
                |||  ||||||  |||||||||||||||||||||| || |||| | ||||||||||||||
Sbjct: 28938168 tttattgagagtgatatgaagcatttgatgccagccttccttgacttgatgtacatgtac 28938227

                                                                            
Query: 133      ttggatcttgatatgcatgagaaattagaactaacattctcgaaatgccttgctaggtgc 192
                 ||||||| ||||||||||| || |||||| |||||||||  |||||| | || ||||||
Sbjct: 28938228 atggatctggatatgcatgaaaagttagaattaacattcttaaaatgcatagccaggtgc 28938287

                                                                            
Query: 193      cgtccaaatagaatcttgtacaccatctatctagaatcacagataagggctgggaatgtt 252
                |||||||| ||||| ||||||||||| ||||| |||||||   ||| || ||| ||| | 
Sbjct: 28938288 cgtccaaacagaatattgtacaccatttatctggaatcactagtaaaggttggaaatatc 28938347

                                                                            
Query: 253      gagaaagctgaggaggtcttcaatgaaatgcacaaaaaagggacgataggtactaacgca 312
                ||||| ||||||||||| ||   |||||||||||| || |||| ||||||||||||| | 
Sbjct: 28938348 gagaaggctgaggaggtatttggtgaaatgcacaataatgggatgataggtactaacacg 28938407

                                                                            
Query: 313      aagtcttgcaacatcatgctaagaggttatatttctgtagaagactatcagaaagctgaa 372
                ||||| |||||||| ||||||||||||||| |||||| |||||||||||||||||| |||
Sbjct: 28938408 aagtcgtgcaacattatgctaagaggttatctttctgcagaagactatcagaaagccgaa 28938467

                                                                            
Query: 373      aaggtttatgatatgatgtgtaaaaagaagtatgatgtacaggaggatttgttggaagaa 432
                |||||||||||||||||| |||||||||| |||||||||||||  || |  |||||| | 
Sbjct: 28938468 aaggtttatgatatgatgagtaaaaagaaatatgatgtacaggcagactctttggaaaag 28938527

                                                                            
Query: 433      cttcagactggtctccgtcttggtaagaaagtcgctgttaagccaaaacccgtgagcatg 492
                || || | |||||||| |||    ||||||||   | |||| |||||| | |||||||||
Sbjct: 28938528 ctccaaagtggtctccttctcaacaagaaagt---tattaaaccaaaaactgtgagcatg 28938584

                                                                            
Query: 493      aaattggatcaagagcagcgtgagattttgattggttttcttctgggaggcacacagatt 552
                ||  ||||||||||||||||||| ||||| |||||||| |||||||||||||| |  || 
Sbjct: 28938585 aagctggatcaagagcagcgtgaaattttaattggtttgcttctgggaggcactcgaatg 28938644

                                                                            
Query: 553      gaatctcatgcacagagaggggttcacattgtccattttaagttccaggaatattccgat 612
                |||||| |||||||| ||||||| || ||||| || ||| ||||||||||| ||||| ||
Sbjct: 28938645 gaatcttatgcacagcgaggggtccatattgtgcactttcagttccaggaagattccaat 28938704

                                                                            
Query: 613      gcccattcggtcttaagggtgcacattcatgagcgtttctttgaatggctgacttcagca 672
                || ||||| || |||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 28938705 gctcattcagttttaagggtgcacattcatgagcgtttctttgaatggttgtcttcagca 28938764

                                                         
Query: 673      agcagatcatttgatgatgagagcaagataccttatgagtt 713
                ||||||||||| ||||||| |||||||||||| ||| ||||
Sbjct: 28938765 agcagatcattcgatgatgggagcaagataccctatcagtt 28938805
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>dbj|AP004052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1218_D07
          Length = 114511

 Score =  545 bits (275), Expect = e-152
 Identities = 595/701 (84%), Gaps = 3/701 (0%)
 Strand = Plus / Plus

                                                                         
Query: 13    ataattgagataatggcaaatgctaaggagatagatgttgcggaacaacttatggatgaa 72
             ||||||||||||||| |||| |||  |||  ||||| | | ||||||||||||| |||||
Sbjct: 21166 ataattgagataatgacaaaagctctggaagtagatatcgtggaacaacttatgaatgaa 21225

                                                                         
Query: 73    ttttctgagagccatatgaagcatttgatgccagcatttcttgccctgatgtacatgtac 132
             |||  ||||||  |||||||||||||||||||||| || |||| | ||||||||||||||
Sbjct: 21226 tttattgagagtgatatgaagcatttgatgccagccttccttgacttgatgtacatgtac 21285

                                                                         
Query: 133   ttggatcttgatatgcatgagaaattagaactaacattctcgaaatgccttgctaggtgc 192
              ||||||| ||||||||||| || |||||| |||||||||  |||||| | || ||||||
Sbjct: 21286 atggatctggatatgcatgaaaagttagaattaacattcttaaaatgcatagccaggtgc 21345

                                                                         
Query: 193   cgtccaaatagaatcttgtacaccatctatctagaatcacagataagggctgggaatgtt 252
             |||||||| ||||| ||||||||||| ||||| |||||||   ||| || ||| ||| | 
Sbjct: 21346 cgtccaaacagaatattgtacaccatttatctggaatcactagtaaaggttggaaatatc 21405

                                                                         
Query: 253   gagaaagctgaggaggtcttcaatgaaatgcacaaaaaagggacgataggtactaacgca 312
             ||||| ||||||||||| ||   |||||||||||| || |||| ||||||||||||| | 
Sbjct: 21406 gagaaggctgaggaggtatttggtgaaatgcacaataatgggatgataggtactaacacg 21465

                                                                         
Query: 313   aagtcttgcaacatcatgctaagaggttatatttctgtagaagactatcagaaagctgaa 372
             ||||| |||||||| ||||||||||||||| |||||| |||||||||||||||||| |||
Sbjct: 21466 aagtcgtgcaacattatgctaagaggttatctttctgcagaagactatcagaaagccgaa 21525

                                                                         
Query: 373   aaggtttatgatatgatgtgtaaaaagaagtatgatgtacaggaggatttgttggaagaa 432
             |||||||||||||||||| |||||||||| |||||||||||||  || |  |||||| | 
Sbjct: 21526 aaggtttatgatatgatgagtaaaaagaaatatgatgtacaggcagactctttggaaaag 21585

                                                                         
Query: 433   cttcagactggtctccgtcttggtaagaaagtcgctgttaagccaaaacccgtgagcatg 492
             || || | |||||||| |||    ||||||||   | |||| |||||| | |||||||||
Sbjct: 21586 ctccaaagtggtctccttctcaacaagaaagt---tattaaaccaaaaactgtgagcatg 21642

                                                                         
Query: 493   aaattggatcaagagcagcgtgagattttgattggttttcttctgggaggcacacagatt 552
             ||  ||||||||||||||||||| ||||| |||||||| |||||||||||||| |  || 
Sbjct: 21643 aagctggatcaagagcagcgtgaaattttaattggtttgcttctgggaggcactcgaatg 21702

                                                                         
Query: 553   gaatctcatgcacagagaggggttcacattgtccattttaagttccaggaatattccgat 612
             |||||| |||||||| ||||||| || ||||| || ||| ||||||||||| ||||| ||
Sbjct: 21703 gaatcttatgcacagcgaggggtccatattgtgcactttcagttccaggaagattccaat 21762

                                                                         
Query: 613   gcccattcggtcttaagggtgcacattcatgagcgtttctttgaatggctgacttcagca 672
             || ||||| || |||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 21763 gctcattcagttttaagggtgcacattcatgagcgtttctttgaatggttgtcttcagca 21822

                                                      
Query: 673   agcagatcatttgatgatgagagcaagataccttatgagtt 713
             ||||||||||| ||||||| |||||||||||| ||| ||||
Sbjct: 21823 agcagatcattcgatgatgggagcaagataccctatcagtt 21863
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>gb|AC147618.3| Mus musculus chromosome 19 clone RP24-245M20, complete sequence
          Length = 172863

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 277    gaaatgcacaaaaaagggacgatagg 302
              ||||||||||||||||||| ||||||
Sbjct: 131529 gaaatgcacaaaaaagggaagatagg 131504
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>gb|AC128739.4| Mus musculus BAC clone RP24-168G14 from chromosome 19, complete
             sequence
          Length = 195342

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 277   gaaatgcacaaaaaagggacgatagg 302
             ||||||||||||||||||| ||||||
Sbjct: 31437 gaaatgcacaaaaaagggaagatagg 31412
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>gb|AC126695.4| Mus musculus BAC clone RP23-313D2 from 18, complete sequence
          Length = 171427

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 233    agataagggctgggaatgttga 254
              ||||||||||||||||||||||
Sbjct: 100092 agataagggctgggaatgttga 100071
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>ref|NM_001030995.1| Gallus gallus serine/threonine kinase 17a (apoptosis-inducing)
            (STK17A), mRNA
          Length = 2833

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 248  atgttgagaaagctgaggagg 268
            |||||||||||||||||||||
Sbjct: 1134 atgttgagaaagctgaggagg 1154
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>emb|AL669983.2| Human DNA sequence from clone RP11-220D10 on chromosome 9 Contains a
             ribosomal protein L35 (RPL35) pseudogene, complete
             sequence
          Length = 60725

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 415   gaggatttgttggaagaactt 435
             |||||||||||||||||||||
Sbjct: 14802 gaggatttgttggaagaactt 14782
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>emb|AL663078.8| Mouse DNA sequence from clone RP23-440P13 on chromosome 11 Contains the
              gene for a novel protein (6230425C22Rik) similar to Homo
              sapiens CGI-48 protein, the 5' end of the Mbtd1 gene for
              mbt domain containing 1 and one CpG island, complete
              sequence
          Length = 126275

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 404    atgatgtacaggaggatttgt 424
              |||||||||||||||||||||
Sbjct: 109992 atgatgtacaggaggatttgt 109972
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>emb|AJ719290.1| Gallus gallus mRNA for hypothetical protein, clone 1c13
          Length = 2862

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 248  atgttgagaaagctgaggagg 268
            |||||||||||||||||||||
Sbjct: 1163 atgttgagaaagctgaggagg 1183
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>gb|AC093484.2| Homo sapiens chromosome , clone RP11-138I1, complete sequence
          Length = 170944

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 387    gatgtgtaaaaagaagtatga 407
              |||||||||||||||||||||
Sbjct: 116323 gatgtgtaaaaagaagtatga 116343
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>ref|NM_127144.2| Arabidopsis thaliana endonuclease AT2G15820 mRNA, complete cds
          Length = 1867

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 251 ttgagaaagctgaggaggtcttcaatgaaatg 282
           |||||||||| | ||| |||||||||||||||
Sbjct: 760 ttgagaaagcaggggatgtcttcaatgaaatg 791
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>gb|AC149290.1| Solanum demissum chromosome 5 clone PGEC093P17 map MAP_LOC, complete
             sequence
          Length = 200238

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 275   atgaaatgcacaaaaaaggg 294
             ||||||||||||||||||||
Sbjct: 66292 atgaaatgcacaaaaaaggg 66273
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>gb|AC116472.14| Mus musculus chromosome 7, clone RP23-384B23, complete sequence
          Length = 216191

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    aagcatttgatgccagcatt 110
             ||||||||||||||||||||
Sbjct: 70078 aagcatttgatgccagcatt 70097
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>gb|AC155298.2| Mus musculus BAC clone RP24-245L7 from chromosome 13, complete sequence
          Length = 178609

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     agataatggcaaatgctaag 39
              ||||||||||||||||||||
Sbjct: 160280 agataatggcaaatgctaag 160299
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>gb|AC122746.7| Mus musculus chromosome 17, clone RP23-144A20, complete sequence
          Length = 218858

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 272    tcaatgaaatgcacaaaaaa 291
              ||||||||||||||||||||
Sbjct: 137137 tcaatgaaatgcacaaaaaa 137118
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>gb|AC150307.3| Rhinolophus ferrumequinum clone VMRC7-71A7, complete sequence
          Length = 137605

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 20     agataatggcaaatgctaaggaga 43
              ||||| ||||||||||||||||||
Sbjct: 101308 agatagtggcaaatgctaaggaga 101285
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>gb|AC116480.10| Mus musculus chromosome 12, clone RP23-398M9, complete sequence
          Length = 194708

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 383   atatgatgtgtaaaaagaag 402
             ||||||||||||||||||||
Sbjct: 18161 atatgatgtgtaaaaagaag 18142
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>gb|AC099413.3| Mus musculus BAC clone RP23-2O10 from 4, complete sequence
          Length = 208798

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 532    cttctgggaggcacacagat 551
              ||||||||||||||||||||
Sbjct: 102037 cttctgggaggcacacagat 102056
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>ref|XM_650464.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (26.t00035)
           partial mRNA
          Length = 327

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 61  cttatggatgaattttctga 80
           ||||||||||||||||||||
Sbjct: 94  cttatggatgaattttctga 113
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>gb|AC003985.2| Homo sapiens PAC clone RP5-978I12 from 7, complete sequence
          Length = 104492

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 195   tccaaatagaatcttgtaca 214
             ||||||||||||||||||||
Sbjct: 58317 tccaaatagaatcttgtaca 58336
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>emb|AL590036.11| Human DNA sequence from clone RP11-379D21 on chromosome 10 Contains an
              ADP-ribosylation factor-like 5 (ARL5) pseudogene, a
              ribosomal protein L7 (RPL7) pseudogene and part of the
              HPSE2 gene for heparanase 2, complete sequence
          Length = 197103

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 517    attttgattggttttcttct 536
              ||||||||||||||||||||
Sbjct: 154512 attttgattggttttcttct 154493
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>gb|AY056274.1| Arabidopsis thaliana unknown protein (At2g15820) mRNA, complete cds
          Length = 1891

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 251 ttgagaaagctgaggaggtcttcaatgaaatg 282
           |||||||||| | ||| |||||||||||||||
Sbjct: 767 ttgagaaagcaggggatgtcttcaatgaaatg 798
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>emb|X04961.1|GGHSP108 Hen gene for steroid inducible 108K heat shock protein
          Length = 11432

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 679  tcatttgatgatgagagcaa 698
            ||||||||||||||||||||
Sbjct: 8375 tcatttgatgatgagagcaa 8394
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>emb|AL713919.11| Mouse DNA sequence from clone RP23-41F14 on chromosome 11 Contains part
             of the Odz2 gene for odd Oz/ten-m homolog 2 (Drosophila)
             and a novel gene, complete sequence
          Length = 170766

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   taacattctcgaaatgcctt 183
             ||||||||||||||||||||
Sbjct: 79077 taacattctcgaaatgcctt 79096
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>gb|AC157542.11| Mus musculus chromosome 1, clone RP23-115I1, complete sequence
          Length = 211677

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 377  tttatgatatgatgtgtaaa 396
            ||||||||||||||||||||
Sbjct: 6890 tttatgatatgatgtgtaaa 6871
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>gb|AC117458.3| Homo sapiens 3 BAC RP11-345M4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 101243

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 519   tttgattggttttcttctgg 538
             ||||||||||||||||||||
Sbjct: 43828 tttgattggttttcttctgg 43809
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>gb|AC006438.4| Arabidopsis thaliana chromosome 2 clone F19G14 map mi398, complete
             sequence
          Length = 91106

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 251   ttgagaaagctgaggaggtcttcaatgaaatg 282
             |||||||||| | ||| |||||||||||||||
Sbjct: 66775 ttgagaaagcaggggatgtcttcaatgaaatg 66806
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>gb|AC099674.2| Homo sapiens chromosome 1 clone RP11-143H12, complete sequence
          Length = 181928

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   gagataatggcaaatgctaa 38
            ||||||||||||||||||||
Sbjct: 4057 gagataatggcaaatgctaa 4038
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>gb|AC104837.2| Homo sapiens chromosome 1 clone RP4-641G12, complete sequence
          Length = 151265

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     gagataatggcaaatgctaa 38
              ||||||||||||||||||||
Sbjct: 115899 gagataatggcaaatgctaa 115880
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>dbj|AK163902.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:C230036K08 product:hypothetical
            protein, full insert sequence
          Length = 3511

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 20   agataatggcaaatgctaag 39
            ||||||||||||||||||||
Sbjct: 2939 agataatggcaaatgctaag 2920
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>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 341     atatttctgtagaagactat 360
               ||||||||||||||||||||
Sbjct: 5976072 atatttctgtagaagactat 5976091
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>gb|AC121569.4| Mus musculus BAC clone RP23-228C13 from chromosome 12, complete
             sequence
          Length = 171710

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 383   atatgatgtgtaaaaagaag 402
             ||||||||||||||||||||
Sbjct: 52478 atatgatgtgtaaaaagaag 52497
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>dbj|AK034307.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched
            library, clone:9330175L12 product:unclassifiable, full
            insert sequence
          Length = 4017

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 249  tgttgagaaagctgaggaggtctt 272
            |||||||||||||||| |||||||
Sbjct: 3911 tgttgagaaagctgagaaggtctt 3934
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>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold
          Length = 1756392

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 20      agataatggcaaatgctaaggaga 43
               ||||| ||||||||||||||||||
Sbjct: 1720095 agatagtggcaaatgctaaggaga 1720072
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>gb|AC155947.8| Mus musculus 6 BAC RP24-417N21 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 156871

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 631   gtgcacattcatgagcgttt 650
             ||||||||||||||||||||
Sbjct: 35675 gtgcacattcatgagcgttt 35656
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>gb|AC153374.5| Mus musculus 6 BAC RP23-281H4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 204379

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 631    gtgcacattcatgagcgttt 650
              ||||||||||||||||||||
Sbjct: 173866 gtgcacattcatgagcgttt 173847
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>gb|AC124991.14| Mus musculus chromosome 12, clone RP23-138M19, complete sequence
          Length = 179111

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 383   atatgatgtgtaaaaagaag 402
             ||||||||||||||||||||
Sbjct: 50159 atatgatgtgtaaaaagaag 50178
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>gb|BT020586.1| Arabidopsis thaliana At2g15820 gene, complete cds
          Length = 1772

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 251 ttgagaaagctgaggaggtcttcaatgaaatg 282
           |||||||||| | ||| |||||||||||||||
Sbjct: 760 ttgagaaagcaggggatgtcttcaatgaaatg 791
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>gb|AC171013.3| Gallus gallus BAC clone CH261-71N5 from chromosome ul, complete sequence
          Length = 196838

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 679    tcatttgatgatgagagcaa 698
              ||||||||||||||||||||
Sbjct: 113422 tcatttgatgatgagagcaa 113403
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>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 665     cttcagcaagcagatcatttgatg 688
               |||||||||||||| |||||||||
Sbjct: 1623504 cttcagcaagcagaccatttgatg 1623527
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>gb|AC135469.4| Mus musculus BAC clone RP24-406G8 from 13, complete sequence
          Length = 165641

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    agataatggcaaatgctaag 39
             ||||||||||||||||||||
Sbjct: 46801 agataatggcaaatgctaag 46820
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>gb|AC124490.4| Mus musculus BAC clone RP23-453I1 from 16, complete sequence
          Length = 189215

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 556   tctcatgcacagagaggggt 575
             ||||||||||||||||||||
Sbjct: 82533 tctcatgcacagagaggggt 82514
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>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 329    tgctaagaggttatatttctgtag 352
              ||||||||||| ||||||||||||
Sbjct: 275569 tgctaagaggtgatatttctgtag 275592
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>emb|AL672274.7| Mouse DNA sequence from clone RP23-351G20 on chromosome X, complete
              sequence
          Length = 189982

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 87     tatgaagcatttgatgccag 106
              ||||||||||||||||||||
Sbjct: 129995 tatgaagcatttgatgccag 130014
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>emb|AL772320.12| Mouse DNA sequence from clone RP23-346F2 on chromosome 4, complete
              sequence
          Length = 211321

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 532    cttctgggaggcacacagat 551
              ||||||||||||||||||||
Sbjct: 187308 cttctgggaggcacacagat 187289
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>emb|AL671895.9| Mouse DNA sequence from clone RP23-342E4 on chromosome 4, complete
             sequence
          Length = 200368

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 249   tgttgagaaagctgaggaggtctt 272
             |||||||||||||||| |||||||
Sbjct: 67513 tgttgagaaagctgagaaggtctt 67536
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>emb|AL671905.4| Mouse DNA sequence from clone RP23-239H22 on chromosome X, complete
             sequence
          Length = 140012

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 516   gattttgattggttttcttc 535
             ||||||||||||||||||||
Sbjct: 64333 gattttgattggttttcttc 64314


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,102,097
Number of Sequences: 3902068
Number of extensions: 7102097
Number of successful extensions: 134181
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 133987
Number of HSP's gapped (non-prelim): 191
length of query: 715
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 692
effective length of database: 17,143,297,704
effective search space: 11863162011168
effective search space used: 11863162011168
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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