| Clone Name | bags29g21 |
|---|---|
| Clone Library Name | barley_pub |
>MAPT_ARATH (Q9T041) Microtubule-associated protein TORTIFOLIA1| (Microtubule-associated protein SPIRAL2) (Protein CONVOLUTA) Length = 864 Score = 67.8 bits (164), Expect = 3e-11 Identities = 33/75 (44%), Positives = 52/75 (69%) Frame = +2 Query: 95 SDNSDELQLVHKDEDLSKIRMQLVQIENQQTNLLDLLQKFMGSSQNGIRSLETRVNGLEM 274 +DN E + S I+ QL+Q+E QQTNL+++LQ+F+G S + + +LE RV GLE Sbjct: 492 TDNQSEGSFTSNRGNWSAIQRQLLQLERQQTNLMNMLQEFIGGSHDSMVTLEGRVRGLER 551 Query: 275 ALDEISRDLAASSGR 319 +++++RDL+ SSGR Sbjct: 552 IVEDMARDLSISSGR 566
>FLAF_VIBPA (O87081) Polar flagellin F| Length = 377 Score = 34.3 bits (77), Expect = 0.32 Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 2/107 (1%) Frame = +2 Query: 20 SCSYNGDGDSEESTEVEDD-GPEEFQSDNSDELQLVHKDED-LSKIRMQLVQIENQQTNL 193 + S N G + ED G F D + EL + K D ++ + + V Q + Sbjct: 234 TASVNEKGQLQIFMAGEDTAGTISFSGDLASELGMSLKGYDAVNNLNITTVGGAQQAVAV 293 Query: 194 LDLLQKFMGSSQNGIRSLETRVNGLEMALDEISRDLAASSGRMPSSE 334 LD KF+ S + + + + R N LD I +LAAS+ R+ ++ Sbjct: 294 LDTAMKFVDSQRAELGAYQNRFNHAINNLDNIHENLAASNSRIQDTD 340
>GOGA5_HUMAN (Q8TBA6) Golgin subfamily A member 5 (Golgin-84) (RET-fused gene 5| protein) (Ret-II protein) Length = 731 Score = 33.1 bits (74), Expect = 0.70 Identities = 19/82 (23%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Frame = +2 Query: 89 FQSDNSDELQLVHKDEDLSKIRMQLV------QIENQQTNLLDLLQKFMGSSQNGIRSLE 250 +++ N+ + ++ +DE++ K+R QL +++ N L L + + Q + SL Sbjct: 550 YRTKNTLQSRIKDRDEEIQKLRNQLTNKTLSNSSQSELENRLHQLTETLIQKQTMLESLS 609 Query: 251 TRVNGLEMALDEISRDLAASSG 316 T N L L+ + + + ++SG Sbjct: 610 TEKNSLVFQLERLEQQMNSASG 631
>EP15R_HUMAN (Q9UBC2) Epidermal growth factor receptor substrate 15-like 1| (Eps15-related protein) (Eps15R) Length = 864 Score = 33.1 bits (74), Expect = 0.70 Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 1/161 (0%) Frame = +2 Query: 50 EESTEVEDDGPEEFQSDNSDELQLVHKDEDLSKIRMQLVQIENQQTNLLDLLQKFMGSSQ 229 ++ T++ + QS SD L +++DL++ + +L +++ ++T L S Q Sbjct: 471 QDETQMISSLKTQIQSQESD---LKSQEDDLNRAKSELNRLQQEETQLEQ-------SIQ 520 Query: 230 NGIRSLETRVNGLEMALDEISRDLAASSGRMPSSEPDMNCCIPSPKFWRKNDGGRYISRY 409 G LET + L+ DEI++ A S E ++ + DG S Sbjct: 521 AGRVQLETIIKSLKSTQDEINQ---ARSKLSQLHESRQEAHRSLEQYDQVLDGAHGAS-- 575 Query: 410 PVSDLANHSEEVRASHKWERQKFG-VQGGFVTNPLAESPNT 529 ++DLAN SE V + ER FG + F L S NT Sbjct: 576 -LTDLANLSEGVSLA---ERGSFGAMDDPFKNKALLFSNNT 612
>LVA_DROME (Q8MSS1) Protein lava lamp| Length = 2779 Score = 32.7 bits (73), Expect = 0.92 Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 4/96 (4%) Frame = +2 Query: 38 DGDSEESTEVEDDGP----EEFQSDNSDELQLVHKDEDLSKIRMQLVQIENQQTNLLDLL 205 +GD++E +V GP E Q++ ++E E LS++R +L ++ +LD L Sbjct: 626 EGDAQEQKQVHPPGPSHVSELTQTEQTEEED--SSGETLSQLRERLELFTQERGEVLDKL 683 Query: 206 QKFMGSSQNGIRSLETRVNGLEMALDEISRDLAASS 313 ++ + LE + L++ E +DL +S+ Sbjct: 684 EQLSAENLQLQARLEESSSSLQLLQREREKDLISST 719
>YAA5_SCHPO (Q09799) Hypothetical protein C22G7.05 in chromosome I| Length = 598 Score = 32.3 bits (72), Expect = 1.2 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%) Frame = +2 Query: 32 NGDGDSEESTEVEDDGPEEFQSDNSDELQLVHKDEDLSKIRMQLVQIENQQTNLLDLLQK 211 +G+G E S+E E+D E LV + D + +RM +V+I N+ +L D QK Sbjct: 94 DGEGSDESSSEEEEDSDGE----------LVTPEVDAAILRM-IVKIRNKDPDLYDSQQK 142 Query: 212 FMGSSQNGIR-SLETRVNGLEMALDEISRDLAASSGRMPSSEPD 340 + + ++ SL+++ + L + R SG + +E D Sbjct: 143 YFDEVEKDVQGSLKSKDGFRSVTLKDYHRQ-KLLSGEILDAEED 185
>TPM_HALDV (Q9GZ71) Tropomyosin| Length = 284 Score = 32.3 bits (72), Expect = 1.2 Identities = 21/96 (21%), Positives = 42/96 (43%), Gaps = 3/96 (3%) Frame = +2 Query: 53 ESTEVEDDGPEEFQSDNSDELQLVHKDEDLSKIRMQLVQIENQQTNLLDLLQKFMG---S 223 E D + Q E Q +EDL+ ++ + +EN N+ + LQ+ M + Sbjct: 14 EKENAVDRAEQNEQKLRDTEEQKAKIEEDLNNLQKKCANLENDFDNVNEQLQEAMAKLET 73 Query: 224 SQNGIRSLETRVNGLEMALDEISRDLAASSGRMPSS 331 S+ + +E V+G + + DL + R+ ++ Sbjct: 74 SEKRVTEMEQEVSGTTRKITLLEEDLERNEERLQTA 109
>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)| (Proteasomal cap subunit) Length = 437 Score = 32.3 bits (72), Expect = 1.2 Identities = 24/110 (21%), Positives = 59/110 (53%), Gaps = 15/110 (13%) Frame = +2 Query: 32 NGDGDSEESTEVEDDGPEEFQSDNSDELQLVHKDED-----LSKIRMQLV-------QIE 175 +GD +++S E + + P+E + + +E V +++ L++ + +L+ Q++ Sbjct: 16 SGDNHTQQSHEQQPEQPQETEEHHEEEPSRVDPEQEAHNKALNQFKRKLLEHRRYDDQLK 75 Query: 176 NQQTNLLDLLQKFMGSSQNGIRSLETRVNGLEMALDEISRD---LAASSG 316 ++ N+ D L+K ++N I++L++ + + E+S + + ASSG Sbjct: 76 QRRQNIRD-LEKLYDKTENDIKALQSIGQLIGEVMKELSEEKYIVKASSG 124
>GOGB1_HUMAN (Q14789) Golgin subfamily B member 1 (Giantin) (Macrogolgin) (372 kDa| Golgi complex-associated protein) (GCP372) Length = 3259 Score = 32.0 bits (71), Expect = 1.6 Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 12/111 (10%) Frame = +2 Query: 83 EEFQSDN-SDELQLVHKDEDLSKIRMQ-----LVQIENQQTNLLDL------LQKFMGSS 226 +E QS+ S + Q+ KDEDL + Q L + +N Q L L L++ +G Sbjct: 2103 KELQSNKESVKSQMKQKDEDLERRLEQAEEKHLKEKKNMQEKLDALRREKVHLEETIGEI 2162 Query: 227 QNGIRSLETRVNGLEMALDEISRDLAASSGRMPSSEPDMNCCIPSPKFWRK 379 Q + + V L+ LD LAA + M S + D + I K W + Sbjct: 2163 QVTLNKKDKEVQQLQENLDSTVTQLAAFTKSMSSLQDDRDRVIDEAKKWER 2213
>YR160_MIMIV (Q5UPM2) Hypothetical protein R160| Length = 433 Score = 31.6 bits (70), Expect = 2.0 Identities = 15/47 (31%), Positives = 31/47 (65%) Frame = +2 Query: 182 QTNLLDLLQKFMGSSQNGIRSLETRVNGLEMALDEISRDLAASSGRM 322 ++ L++ L+ F +NGIR+L T VN + + ++ I ++ +SSG++ Sbjct: 260 KSKLINRLEYF----KNGIRNLNTEVNNIIVDINNIMTEMTSSSGKL 302
>MYSP_BRUMA (Q01202) Paramyosin| Length = 880 Score = 31.2 bits (69), Expect = 2.7 Identities = 25/101 (24%), Positives = 50/101 (49%), Gaps = 8/101 (7%) Frame = +2 Query: 44 DSEESTE---VEDDGPEEFQSDNSDELQLVHKDED----LSKIRMQLV-QIENQQTNLLD 199 D +E+T+ D+ +D + ++ +H++++ + +R L Q++ Q Sbjct: 673 DLDEATKELHAADERANRALADAARAVEQLHEEQEHSMKIDALRKSLEEQVKQLQVQFRK 732 Query: 200 LLQKFMGSSQNGIRSLETRVNGLEMALDEISRDLAASSGRM 322 L ++ +G + I LETR+ LE ALDE +R + G + Sbjct: 733 LKRRLLGGKRV-IAKLETRIRDLETALDEETRRHKETQGAL 772
>MYOJ_DICDI (P54697) Myosin IJ heavy chain| Length = 2245 Score = 31.2 bits (69), Expect = 2.7 Identities = 25/107 (23%), Positives = 49/107 (45%) Frame = +2 Query: 26 SYNGDGDSEESTEVEDDGPEEFQSDNSDELQLVHKDEDLSKIRMQLVQIENQQTNLLDLL 205 S N D + +E++ E S+ S +LQL E LSK+ Q Q+++ + L L Sbjct: 1019 SSNNDHLELQLSEIQLKYQELDNSNQSSQLQL---SECLSKLEEQTQQLDH-SSKLNKKL 1074 Query: 206 QKFMGSSQNGIRSLETRVNGLEMALDEISRDLAASSGRMPSSEPDMN 346 +K + + I L+++ N E L + + S ++ + ++ Sbjct: 1075 EKDLSDQHDSIEKLQSQFNETEQQLQQFKQQSEELSSKLSKTTQQLD 1121
>NRDC_MOUSE (Q8BHG1) Nardilysin precursor (EC 3.4.24.61) (N-arginine dibasic| convertase) (NRD convertase) (NRD-C) Length = 1161 Score = 31.2 bits (69), Expect = 2.7 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Frame = +2 Query: 38 DGDSEESTEVEDDGPE------EFQSDNSDELQLVHKDEDLSKIRMQLVQIENQ 181 D D + E++DD E EF D+ DE H D+DL +L ++E + Sbjct: 161 DDDEDSGAEIQDDDEEGFDDEEEFDDDDDDE----HDDDDLENEENELEELEER 210
>NOC2L_CAEEL (O17580) Nucleolar complex protein 2 homolog (NOC2 protein homolog)| Length = 715 Score = 31.2 bits (69), Expect = 2.7 Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 5/87 (5%) Frame = +2 Query: 38 DGDSEESTEVEDDGPEEFQSDNSDELQLVHKDEDLSKIRMQLVQIENQ-----QTNLLDL 202 DGD +E + +D+ EE +SD+ ++ + + KIR ++ +N +N+ Sbjct: 99 DGDDDEDDDEDDEDEEEEESDDDEDDEEDDDKTKIKKIRKPKIKSDNSGRLIVDSNVYSY 158 Query: 203 LQKFMGSSQNGIRSLETRVNGLEMALD 283 LQ+ + S T + + MA+D Sbjct: 159 LQQVLVLDDE--TSTPTNPSDVRMAVD 183
>E41L3_MOUSE (Q9WV92) Band 4.1-like protein 3 (4.1B) (Differentially expressed| in adenocarcinoma of the lung protein 1) (DAL-1) (DAL1P) (mDAL-1) Length = 929 Score = 31.2 bits (69), Expect = 2.7 Identities = 29/111 (26%), Positives = 48/111 (43%) Frame = +2 Query: 5 ASXV*SCSYNGDGDSEESTEVEDDGPEEFQSDNSDELQLVHKDEDLSKIRMQLVQIENQQ 184 A+ V + + G DSE + D +SD ++ ++ K +DL K + +L++ Q Sbjct: 517 ATPVTALRHEGKTDSERTDTAADGETSATESDQEEDAEI--KAQDLDKTQDELMK---HQ 571 Query: 185 TNLLDLLQKFMGSSQNGIRSLETRVNGLEMALDEISRDLAASSGRMPSSEP 337 TN+ +L + F+ +S N E L LAA P EP Sbjct: 572 TNISELKRTFLETSTE-----TALTNEWEKRLSTSPVRLAARQEDAPMIEP 617
>SMC_METJA (Q59037) Chromosome partition protein smc homolog| Length = 1169 Score = 30.4 bits (67), Expect = 4.6 Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 2/89 (2%) Frame = +2 Query: 83 EEFQSD--NSDELQLVHKDEDLSKIRMQLVQIENQQTNLLDLLQKFMGSSQNGIRSLETR 256 E Q+D N +EL K+E LSK+R V+IEN + L +++ + + L Sbjct: 246 ENIQNDIKNLEEL----KNEFLSKVREIDVEIENLKLRLNNIINELNEKGNEEVLELHKS 301 Query: 257 VNGLEMALDEISRDLAASSGRMPSSEPDM 343 + LE+ ++ + L +S + E ++ Sbjct: 302 IKELEVEIENDKKVLDSSINELKKVEVEI 330
>ZFH2_DROME (P28167) Zinc finger protein 2 (Zinc finger homeodomain protein 2)| Length = 3005 Score = 30.0 bits (66), Expect = 6.0 Identities = 22/106 (20%), Positives = 49/106 (46%), Gaps = 4/106 (3%) Frame = +2 Query: 29 YNGDGDSEESTEVEDDGPEEFQSDNSDELQLVHKDEDLSKIRMQLVQIENQQTNLLDLLQ 208 Y G+ E++TE+ Q + DE + + + + + M ++EN N +++ Q Sbjct: 2602 YIGETSLEQATEL--------QREKQDEQLRIDRPSEENDLSMNKNKVENINNNNINVDQ 2653 Query: 209 KFMGSSQNGIRSLETRVNGLE----MALDEISRDLAASSGRMPSSE 334 + + G+ S+ET+ + +A+D+ ++ L S + E Sbjct: 2654 SNLTETNGGVPSVETKEECTQESSLIAMDDENKYLCTRSKQKDDKE 2699
>MYSP_ANISI (Q9NJA9) Paramyosin (Allergen Ani s 2)| Length = 869 Score = 30.0 bits (66), Expect = 6.0 Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 5/80 (6%) Frame = +2 Query: 71 DDGPEEFQSDNSDELQLVHKDEDLS-KIRMQLVQIENQQTNLLDLLQKFMGSSQNG---- 235 D+ +D + +Q +H++++ S KI +E Q L +Q+ ++ G Sbjct: 679 DERANRALADAARAVQELHEEQEHSMKIDALRKSLEEQVKQLQVQIQEAEAAALLGGKRV 738 Query: 236 IRSLETRVNGLEMALDEISR 295 I LETR+ LE+ALDE +R Sbjct: 739 IAKLETRIRDLEVALDEETR 758
>RUFY1_HUMAN (Q96T51) RUN and FYVE domain-containing protein 1 (FYVE-finger| protein EIP1) (Zinc finger FYVE domain-containing protein 12) Length = 600 Score = 30.0 bits (66), Expect = 6.0 Identities = 20/107 (18%), Positives = 48/107 (44%), Gaps = 6/107 (5%) Frame = +2 Query: 50 EESTEVEDDGPEEFQSDNSDELQLVHKDEDLSKIRMQLVQIENQQTNLLDL------LQK 211 E+ + +E + E + + + +L H+ + S +RM+L Q+E + L +L LQK Sbjct: 434 EQCSSLEKELKSEKEQRQALQRELQHEKDTSSLLRMELQQVEGLKKELRELQDEKAELQK 493 Query: 212 FMGSSQNGIRSLETRVNGLEMALDEISRDLAASSGRMPSSEPDMNCC 352 + ++ + ++ ++ +++I A G + + C Sbjct: 494 ICEEQEQALQEMGLHLSQSKLKMEDIKEVNQALKGHAWLKDDEATHC 540
>SMC1A_XENLA (O93308) Structural maintenance of chromosome 1 protein (xSMC1)| Length = 1232 Score = 30.0 bits (66), Expect = 6.0 Identities = 16/87 (18%), Positives = 43/87 (49%), Gaps = 4/87 (4%) Frame = +2 Query: 50 EESTEVEDDGPEEFQSDNSDELQLVHKD----EDLSKIRMQLVQIENQQTNLLDLLQKFM 217 E+S + +D+ E+ + + ++++ + +DL + N + +L++ ++K + Sbjct: 839 EQSVKKDDNEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHLMEDIRKKL 898 Query: 218 GSSQNGIRSLETRVNGLEMALDEISRD 298 GS+ + L+ V +E L++ D Sbjct: 899 GSANKEVTHLQKEVTAIETKLEQKRSD 925
>VE2_HPV19 (P36786) Regulatory protein E2| Length = 493 Score = 30.0 bits (66), Expect = 6.0 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 4/68 (5%) Frame = +3 Query: 438 RRSELLISGRGR----SLEFRVGSSPTH*QSLRTLHT*GARWLLRKAGGRIQPNTSRGRV 605 RR GRGR + + SP+ S +L + G+ + R GGR + SRGR Sbjct: 294 RRKASTTRGRGRGSPTATSDQSSRSPSATSSTTSLRSRGSSRVGRSRGGRSRVGRSRGRG 353 Query: 606 RGDKDAPS 629 + +++PS Sbjct: 354 KRSRESPS 361
>MYSP_ONCVO (Q02171) Paramyosin| Length = 879 Score = 30.0 bits (66), Expect = 6.0 Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 8/101 (7%) Frame = +2 Query: 44 DSEESTE---VEDDGPEEFQSDNSDELQLVHKDEDLS-KIRMQLVQIENQQTNLLDLLQK 211 D +E+T+ D+ +D + ++ +H++++ S KI +E Q L +Q+ Sbjct: 673 DLDEATKELHAADERANRALADAARAVEQLHEEQEHSMKIDALRKSLEEQVKQLQVQIQE 732 Query: 212 FMGSSQNG----IRSLETRVNGLEMALDEISRDLAASSGRM 322 ++ G I LETR+ LE ALDE +R + G + Sbjct: 733 AEAAALLGGKRVIAKLETRIRDLETALDEETRRHKETQGAL 773
>EP15R_MOUSE (Q60902) Epidermal growth factor receptor substrate 15-like 1| (Eps15-related protein) (Eps15R) (Epidermal growth factor receptor pathway substrate 15-related sequence) (Eps15-rs) Length = 907 Score = 30.0 bits (66), Expect = 6.0 Identities = 17/82 (20%), Positives = 42/82 (51%) Frame = +2 Query: 50 EESTEVEDDGPEEFQSDNSDELQLVHKDEDLSKIRMQLVQIENQQTNLLDLLQKFMGSSQ 229 ++ T+ + QS SD L +++DL++ + +L +++ ++T L +Q + Sbjct: 469 QDETQTISSLKTQIQSQESD---LKSQEDDLNRAKSELNRLQQEETQLEQSIQAGRAQLE 525 Query: 230 NGIRSLETRVNGLEMALDEISR 295 +RSL+ + + A ++S+ Sbjct: 526 TILRSLKCTQDDINQARSKLSQ 547
>MYSP_DIRIM (P13392) Paramyosin (Fragment)| Length = 848 Score = 30.0 bits (66), Expect = 6.0 Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 8/101 (7%) Frame = +2 Query: 44 DSEESTE---VEDDGPEEFQSDNSDELQLVHKDEDLS-KIRMQLVQIENQQTNLLDLLQK 211 D +E+T+ D+ +D + ++ +H++++ S KI +E Q L +Q+ Sbjct: 646 DLDEATKELHAADERANRALADAARAVEQLHEEQEHSMKIDALRKSLEEQVKQLQVQIQE 705 Query: 212 FMGSSQNG----IRSLETRVNGLEMALDEISRDLAASSGRM 322 ++ G I LETR+ LE ALDE +R + G + Sbjct: 706 AEAAALLGGKRVIAKLETRIRDLETALDEETRRHKETQGAL 746
>FALZ_HUMAN (Q12830) Fetal Alzheimer antigen (Fetal Alz-50-reactive clone 1)| Length = 810 Score = 29.6 bits (65), Expect = 7.8 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +2 Query: 38 DGDSEESTEVEDDGPEEFQSDNSD 109 DGD+EE+ + EDD +E + D+ D Sbjct: 10 DGDAEETQDSEDDEEDEMEEDDDD 33
>YSO1_CAEEL (Q10127) Putative zinc finger protein F56D1.1| Length = 468 Score = 29.6 bits (65), Expect = 7.8 Identities = 13/38 (34%), Positives = 21/38 (55%) Frame = +2 Query: 26 SYNGDGDSEESTEVEDDGPEEFQSDNSDELQLVHKDED 139 S+N E +V DD PE+ Q D D +Q +H++ + Sbjct: 202 SFNKCPLCEYKPDVSDDDPEQQQKDLEDHVQRIHEERE 239
>GUX2_TRIRE (P07987) Exoglucanase 2 precursor (EC 3.2.1.91) (Exoglucanase II)| (Exocellobiohydrolase II) (CBHII) (1,4-beta-cellobiohydrolase) Length = 471 Score = 29.6 bits (65), Expect = 7.8 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 6/65 (9%) Frame = -3 Query: 398 CIYHHHFFSRILGSGCSSSCQVRCSASVLRRRPDHARSRPVPFPDRS------PLSPTNV 237 C+Y + ++S+ L SSS R +++ R P +RS P S P+ Sbjct: 51 CVYSNDYYSQCLPGAASSSSSTRAASTTSRVSPTTSRSSSATPPPGSTTTRVPPVGSGTA 110 Query: 236 SHSGS 222 ++SG+ Sbjct: 111 TYSGN 115
>SIAL_PIG (P31936) Bone sialoprotein-2 (Bone sialoprotein II) (BSP II)| (Cell-binding sialoprotein) (Integrin-binding sialoprotein) Length = 300 Score = 29.6 bits (65), Expect = 7.8 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = +2 Query: 20 SCSYNGDGDSEESTEVEDDGPEEFQSDNSDELQLVHKDED 139 S NG+GDS E E E++ E +++ +E ++DED Sbjct: 50 SSEENGNGDSSEEEEEEEENSNEEENNEENEDSDGNEDED 89
>BRE1_DEBHA (Q6BWW6) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 691 Score = 29.6 bits (65), Expect = 7.8 Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 2/97 (2%) Frame = +2 Query: 50 EESTEVEDDGPEEFQSDNSDELQL-VHKDEDLSKIRMQLVQIENQQTN-LLDLLQKFMGS 223 +E E + ++ Q +D +++ +DE LSK + ENQ TN L+ L K + Sbjct: 347 KELREENETLKQQLQKSENDLVRIRTARDELLSKQTILKADFENQTTNDELNKLNKVLNE 406 Query: 224 SQNGIRSLETRVNGLEMALDEISRDLAASSGRMPSSE 334 N + S E G + E+S+D M +SE Sbjct: 407 RINALES-ERHETGDNSKISELSKDELIQRINMLNSE 442
>BFR2_USTMA (Q4P5V5) Protein BFR2| Length = 581 Score = 29.6 bits (65), Expect = 7.8 Identities = 12/38 (31%), Positives = 21/38 (55%) Frame = +2 Query: 29 YNGDGDSEESTEVEDDGPEEFQSDNSDELQLVHKDEDL 142 YNG+ S++ + +DD +E+ SD + DED+ Sbjct: 118 YNGEHASDDDQDDQDDQEDEYGSDGDQDEDADQDDEDM 155
>ABTAP_HUMAN (Q9H501) ABT1-associated protein| Length = 851 Score = 29.6 bits (65), Expect = 7.8 Identities = 21/91 (23%), Positives = 40/91 (43%) Frame = +2 Query: 32 NGDGDSEESTEVEDDGPEEFQSDNSDELQLVHKDEDLSKIRMQLVQIENQQTNLLDLLQK 211 +GD D E E ED+ EE + ++S++ DL++ + + + + DL + Sbjct: 266 SGDDDGSEDDEEEDEDEEEDEDEDSEDDDKSDSGPDLARGKGNIETSSEDEDDTADLFPE 325 Query: 212 FMGSSQNGIRSLETRVNGLEMALDEISRDLA 304 ++G ++ DEI+R LA Sbjct: 326 -----ESGFEHAWRELDKDAPRADEITRRLA 351 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 95,046,627 Number of Sequences: 219361 Number of extensions: 2133351 Number of successful extensions: 8142 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 7167 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8094 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5881538857 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)