ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags29f17 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_474081.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1494 Score = 690 bits (348), Expect = 0.0 Identities = 570/644 (88%) Strand = Plus / Plus Query: 2 acaggtggaagtgtgaggcaaccggcatcgttttgtggtgtggtagggttaaagccaact 61 ||||||||||||||||| || || ||||| ||||||||||||||||||||||||||||| Sbjct: 655 acaggtggaagtgtgagacagccagcatcattttgtggtgtggtagggttaaagccaacc 714 Query: 62 tatggccgggtatctcgttttggcctcatggcttatgcttcatcactggatgttgtggga 121 ||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 715 tatggccgggtttctcgtttcggcctcatggcttatgcttcatcactagatgttgtggga 774 Query: 122 tgctttggatcatcagtttttgacactgcaaccatattgtctgtcattgctggccatgac 181 |||||||| ||||||||| |||||||||| || || ||||| || ||||||||||||||| Sbjct: 775 tgctttggttcatcagttgttgacactgcgacaatcttgtcagtaattgctggccatgac 834 Query: 182 aaaatggattcaaccagcagctctcatgatgttccagactatagatcagacttggcatct 241 |||||||||||||| || ||||||||||||||| ||||||||| |||||| |||| | Sbjct: 835 aaaatggattcaactagtagctctcatgatgtttcagactataaatcagagttggtccca 894 Query: 242 ctaagtttactagaatcaaaaccattaaataatgtgagaattgggattatccaagaaact 301 ||| ||| ||||||||||||||||||||| | |||||||||| ||||| ||||||||| Sbjct: 895 ctagatttgctagaatcaaaaccattaaatggtatgagaattggaattattcaagaaact 954 Query: 302 cttggagagggtgtggatgctggagtcatatcatcaatcagggctgctgcttcgcatctg 361 ||||| |||||||| || ||||||||||||||||||||| || ||||||||| || || Sbjct: 955 cttggtgagggtgtagaaactggagtcatatcatcaatcaaggatgctgcttctcacttg 1014 Query: 362 gaacagctaggatcggtggtggaagaggtttcgatgccttcattttctcttggcttgcca 421 ||||| | ||||| ||||||||||||||||| |||||||||||||||||||| | || Sbjct: 1015 gaacaattgggatcagtggtggaagaggtttctctgccttcattttctcttggcctaccc 1074 Query: 422 gcatattacatattggcctcttctgaagcctcatctaatttgtcacgctatgatggcatc 481 |||||||||||| |||| || ||||||||||| |||||| | ||||| |||||||| ||| Sbjct: 1075 gcatattacatactggcttcatctgaagcctcttctaatctatcacgttatgatggtatc 1134 Query: 482 aggtatgggcggcaggtttcggctgatgacttgaatgagctctacggaaattcccgggct 541 ||||||||| |||||||||| | |||||||||||||| || || ||| |||||||||| Sbjct: 1135 aggtatgggaggcaggtttcaggcgatgacttgaatgaactttatggaggttcccgggct 1194 Query: 542 agtggtctcggtcatgaggtcaaaatgagaattttgatgggaacttatgcattatctgct 601 | ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1195 aacggtctgggtcacgaggtcaaaatgagaattttgatgggaacttatgctttatctgct 1254 Query: 602 ggatactatgatgcatactacaaacgagcgcaacaggtgaggac 645 ||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 1255 ggatactatgatgcatactacaaacgagcacaacaggtaaggac 1298
>dbj|AK103725.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138C11, full insert sequence Length = 2004 Score = 682 bits (344), Expect = 0.0 Identities = 563/636 (88%) Strand = Plus / Plus Query: 2 acaggtggaagtgtgaggcaaccggcatcgttttgtggtgtggtagggttaaagccaact 61 ||||||||||||||||| || || ||||| ||||||||||||||||||||||||||||| Sbjct: 744 acaggtggaagtgtgagacagccagcatcattttgtggtgtggtagggttaaagccaacc 803 Query: 62 tatggccgggtatctcgttttggcctcatggcttatgcttcatcactggatgttgtggga 121 ||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 804 tatggccgggtttctcgtttcggcctcatggcttatgcttcatcactagatgttgtggga 863 Query: 122 tgctttggatcatcagtttttgacactgcaaccatattgtctgtcattgctggccatgac 181 |||||||| ||||||||| |||||||||| || || ||||| || ||||||||||||||| Sbjct: 864 tgctttggttcatcagttgttgacactgcgacaatcttgtcagtaattgctggccatgac 923 Query: 182 aaaatggattcaaccagcagctctcatgatgttccagactatagatcagacttggcatct 241 |||||||||||||| || ||||||||||||||| ||||||||| |||||| |||| | Sbjct: 924 aaaatggattcaactagtagctctcatgatgtttcagactataaatcagagttggtccca 983 Query: 242 ctaagtttactagaatcaaaaccattaaataatgtgagaattgggattatccaagaaact 301 ||| ||| ||||||||||||||||||||| | |||||||||| ||||| ||||||||| Sbjct: 984 ctagatttgctagaatcaaaaccattaaatggtatgagaattggaattattcaagaaact 1043 Query: 302 cttggagagggtgtggatgctggagtcatatcatcaatcagggctgctgcttcgcatctg 361 ||||| |||||||| || ||||||||||||||||||||| || ||||||||| || || Sbjct: 1044 cttggtgagggtgtagaaactggagtcatatcatcaatcaaggatgctgcttctcacttg 1103 Query: 362 gaacagctaggatcggtggtggaagaggtttcgatgccttcattttctcttggcttgcca 421 ||||| | ||||| ||||||||||||||||| |||||||||||||||||||| | || Sbjct: 1104 gaacaattgggatcagtggtggaagaggtttctctgccttcattttctcttggcctaccc 1163 Query: 422 gcatattacatattggcctcttctgaagcctcatctaatttgtcacgctatgatggcatc 481 |||||||||||| |||| || ||||||||||| |||||| | ||||| |||||||| ||| Sbjct: 1164 gcatattacatactggcttcatctgaagcctcttctaatctatcacgttatgatggtatc 1223 Query: 482 aggtatgggcggcaggtttcggctgatgacttgaatgagctctacggaaattcccgggct 541 ||||||||| |||||||||| | |||||||||||||| || || ||| |||||||||| Sbjct: 1224 aggtatgggaggcaggtttcaggcgatgacttgaatgaactttatggaggttcccgggct 1283 Query: 542 agtggtctcggtcatgaggtcaaaatgagaattttgatgggaacttatgcattatctgct 601 | ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1284 aacggtctgggtcacgaggtcaaaatgagaattttgatgggaacttatgctttatctgct 1343 Query: 602 ggatactatgatgcatactacaaacgagcgcaacag 637 ||||||||||||||||||||||||||||| |||||| Sbjct: 1344 ggatactatgatgcatactacaaacgagcacaacag 1379
>gb|AY109111.1| Zea mays PCO136522 mRNA sequence Length = 1218 Score = 549 bits (277), Expect = e-153 Identities = 514/593 (86%) Strand = Plus / Plus Query: 53 aagccaacttatggccgggtatctcgttttggcctcatggcttatgcttcatcactggat 112 |||||||||||||||||||| ||||||||||| |||||||| || |||||||| |||||| Sbjct: 17 aagccaacttatggccgggtttctcgttttggtctcatggcctacgcttcatcgctggat 76 Query: 113 gttgtgggatgctttggatcatcagtttttgacactgcaaccatattgtctgtcattgct 172 ||||||||||||||||| || || |||||||||||||||||||| || ||||| ||||| Sbjct: 77 gttgtgggatgctttggttcgtcggtttttgacactgcaaccatcttatctgttgttgct 136 Query: 173 ggccatgacaaaatggattcaaccagcagctctcatgatgttccagactatagatcagac 232 ||||||||||| ||||| |||||||||| || || | ||||||||| || ||| || Sbjct: 137 ggccatgacaagatggacgcaaccagcagttcacaggttgttccagagtacgcatcggag 196 Query: 233 ttggcatctctaagtttactagaatcaaaaccattaaataatgtgagaattgggattatc 292 |||| || ||| |||||||||||| |||||||||||| |||||||||||||||||| Sbjct: 197 ttggtctccctagatttactagaatcgaaaccattaaatggtgtgagaattgggattata 256 Query: 293 caagaaactcttggagagggtgtggatgctggagtcatatcatcaatcagggctgctgct 352 ||||||||||||||||| ||||| | ||||||| |||||||||||| || ||||||| Sbjct: 257 caagaaactcttggagaaggtgttgccagtggagtcgtatcatcaatcaagggtgctgct 316 Query: 353 tcgcatctggaacagctaggatcggtggtggaagaggtttcgatgccttcattttctctt 412 || || ||||| ||| | ||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 317 tcacacctggagcagttgggatctgtggtggaagaggtttcactgccttcattttctctt 376 Query: 413 ggcttgccagcatattacatattggcctcttctgaagcctcatctaatttgtcacgctat 472 ||||| ||||||||||||||| | ||||| |||||||| || |||||| | ||||||||| Sbjct: 377 ggcttaccagcatattacatactagcctcatctgaagcttcttctaatctatcacgctat 436 Query: 473 gatggcatcaggtatgggcggcaggtttcggctgatgacttgaatgagctctacggaaat 532 ||||| ||||||||||| | ||||| ||||| ||||||||||||||||| || ||| | Sbjct: 437 gatggtatcaggtatggaggacaggtctcggcggatgacttgaatgagctttatggagag 496 Query: 533 tcccgggctagtggtctcggtcatgaggtcaaaatgagaattttgatgggaacttatgca 592 |||||||||| |||| | ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 497 tcccgggctaatggttttggtcatgaggtcaaaatgagaattttgatgggaacctatgct 556 Query: 593 ttatctgctggatactatgatgcatactacaaacgagcgcaacaggtgaggac 645 | |||||||| |||||||||||||||||||||||||| |||||||| ||||| Sbjct: 557 ctttctgctgggtactatgatgcatactacaaacgagcacaacaggtcaggac 609
>emb|AL731607.3|OSJN00250 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0063C18, complete sequence Length = 150416 Score = 278 bits (140), Expect = 2e-71 Identities = 191/208 (91%) Strand = Plus / Minus Query: 2 acaggtggaagtgtgaggcaaccggcatcgttttgtggtgtggtagggttaaagccaact 61 ||||||||||||||||| || || ||||| ||||||||||||||||||||||||||||| Sbjct: 132126 acaggtggaagtgtgagacagccagcatcattttgtggtgtggtagggttaaagccaacc 132067 Query: 62 tatggccgggtatctcgttttggcctcatggcttatgcttcatcactggatgttgtggga 121 ||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 132066 tatggccgggtttctcgtttcggcctcatggcttatgcttcatcactagatgttgtggga 132007 Query: 122 tgctttggatcatcagtttttgacactgcaaccatattgtctgtcattgctggccatgac 181 |||||||| ||||||||| |||||||||| || || ||||| || ||||||||||||||| Sbjct: 132006 tgctttggttcatcagttgttgacactgcgacaatcttgtcagtaattgctggccatgac 131947 Query: 182 aaaatggattcaaccagcagctctcatg 209 |||||||||||||| || |||||||||| Sbjct: 131946 aaaatggattcaactagtagctctcatg 131919 Score = 147 bits (74), Expect = 5e-32 Identities = 80/82 (97%) Strand = Plus / Minus Query: 558 aggtcaaaatgagaattttgatgggaacttatgcattatctgctggatactatgatgcat 617 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 130652 aggtcaaaatgagaattttgatgggaacttatgctttatctgctggatactatgatgcat 130593 Query: 618 actacaaacgagcgcaacaggt 639 ||||||||||||| |||||||| Sbjct: 130592 actacaaacgagcacaacaggt 130571 Score = 143 bits (72), Expect = 8e-31 Identities = 156/184 (84%) Strand = Plus / Minus Query: 209 gatgttccagactatagatcagacttggcatctctaagtttactagaatcaaaaccatta 268 |||||| ||||||||| |||||| |||| | ||| ||| |||||||||||||||||| Sbjct: 131356 gatgtttcagactataaatcagagttggtcccactagatttgctagaatcaaaaccatta 131297 Query: 269 aataatgtgagaattgggattatccaagaaactcttggagagggtgtggatgctggagtc 328 ||| | |||||||||| ||||| |||||||||||||| |||||||| || |||||||| Sbjct: 131296 aatggtatgagaattggaattattcaagaaactcttggtgagggtgtagaaactggagtc 131237 Query: 329 atatcatcaatcagggctgctgcttcgcatctggaacagctaggatcggtggtggaagag 388 ||||||||||||| || ||||||||| || ||||||| | ||||| |||||||||||| Sbjct: 131236 atatcatcaatcaaggatgctgcttctcacttggaacaattgggatcagtggtggaagag 131177 Query: 389 gttt 392 |||| Sbjct: 131176 gttt 131173 Score = 93.7 bits (47), Expect = 7e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 387 aggtttcgatgccttcattttctcttggcttgccagcatattacatattggcctcttctg 446 ||||||| |||||||||||||||||||| | || |||||||||||| |||| || |||| Sbjct: 131082 aggtttctctgccttcattttctcttggcctacccgcatattacatactggcttcatctg 131023 Query: 447 aagcctcatctaatttgtcacgctatgatggcatcaggt 485 ||||||| |||||| | ||||| |||||||| ||||||| Sbjct: 131022 aagcctcttctaatctatcacgttatgatggtatcaggt 130984 Score = 58.0 bits (29), Expect = 4e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 481 caggtatgggcggcaggtttcggctgatgacttgaatgagctctacggaaattcccgggc 540 |||||||||| |||||||||| | |||||||||||||| || || ||| ||||||||| Sbjct: 130904 caggtatgggaggcaggtttcaggcgatgacttgaatgaactttatggaggttcccgggc 130845 Query: 541 tagtggtctcggtcatgaggt 561 || ||||| ||||| ||||| Sbjct: 130844 taacggtctgggtcacgaggt 130824
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 278 bits (140), Expect = 2e-71 Identities = 191/208 (91%) Strand = Plus / Minus Query: 2 acaggtggaagtgtgaggcaaccggcatcgttttgtggtgtggtagggttaaagccaact 61 ||||||||||||||||| || || ||||| ||||||||||||||||||||||||||||| Sbjct: 32772697 acaggtggaagtgtgagacagccagcatcattttgtggtgtggtagggttaaagccaacc 32772638 Query: 62 tatggccgggtatctcgttttggcctcatggcttatgcttcatcactggatgttgtggga 121 ||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 32772637 tatggccgggtttctcgtttcggcctcatggcttatgcttcatcactagatgttgtggga 32772578 Query: 122 tgctttggatcatcagtttttgacactgcaaccatattgtctgtcattgctggccatgac 181 |||||||| ||||||||| |||||||||| || || ||||| || ||||||||||||||| Sbjct: 32772577 tgctttggttcatcagttgttgacactgcgacaatcttgtcagtaattgctggccatgac 32772518 Query: 182 aaaatggattcaaccagcagctctcatg 209 |||||||||||||| || |||||||||| Sbjct: 32772517 aaaatggattcaactagtagctctcatg 32772490 Score = 147 bits (74), Expect = 5e-32 Identities = 80/82 (97%) Strand = Plus / Minus Query: 558 aggtcaaaatgagaattttgatgggaacttatgcattatctgctggatactatgatgcat 617 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 32771223 aggtcaaaatgagaattttgatgggaacttatgctttatctgctggatactatgatgcat 32771164 Query: 618 actacaaacgagcgcaacaggt 639 ||||||||||||| |||||||| Sbjct: 32771163 actacaaacgagcacaacaggt 32771142 Score = 143 bits (72), Expect = 8e-31 Identities = 156/184 (84%) Strand = Plus / Minus Query: 209 gatgttccagactatagatcagacttggcatctctaagtttactagaatcaaaaccatta 268 |||||| ||||||||| |||||| |||| | ||| ||| |||||||||||||||||| Sbjct: 32771927 gatgtttcagactataaatcagagttggtcccactagatttgctagaatcaaaaccatta 32771868 Query: 269 aataatgtgagaattgggattatccaagaaactcttggagagggtgtggatgctggagtc 328 ||| | |||||||||| ||||| |||||||||||||| |||||||| || |||||||| Sbjct: 32771867 aatggtatgagaattggaattattcaagaaactcttggtgagggtgtagaaactggagtc 32771808 Query: 329 atatcatcaatcagggctgctgcttcgcatctggaacagctaggatcggtggtggaagag 388 ||||||||||||| || ||||||||| || ||||||| | ||||| |||||||||||| Sbjct: 32771807 atatcatcaatcaaggatgctgcttctcacttggaacaattgggatcagtggtggaagag 32771748 Query: 389 gttt 392 |||| Sbjct: 32771747 gttt 32771744 Score = 93.7 bits (47), Expect = 7e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 387 aggtttcgatgccttcattttctcttggcttgccagcatattacatattggcctcttctg 446 ||||||| |||||||||||||||||||| | || |||||||||||| |||| || |||| Sbjct: 32771653 aggtttctctgccttcattttctcttggcctacccgcatattacatactggcttcatctg 32771594 Query: 447 aagcctcatctaatttgtcacgctatgatggcatcaggt 485 ||||||| |||||| | ||||| |||||||| ||||||| Sbjct: 32771593 aagcctcttctaatctatcacgttatgatggtatcaggt 32771555 Score = 58.0 bits (29), Expect = 4e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 481 caggtatgggcggcaggtttcggctgatgacttgaatgagctctacggaaattcccgggc 540 |||||||||| |||||||||| | |||||||||||||| || || ||| ||||||||| Sbjct: 32771475 caggtatgggaggcaggtttcaggcgatgacttgaatgaactttatggaggttcccgggc 32771416 Query: 541 tagtggtctcggtcatgaggt 561 || ||||| ||||| ||||| Sbjct: 32771415 taacggtctgggtcacgaggt 32771395
>emb|AL732332.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0306F03, complete sequence Length = 91539 Score = 278 bits (140), Expect = 2e-71 Identities = 191/208 (91%) Strand = Plus / Minus Query: 2 acaggtggaagtgtgaggcaaccggcatcgttttgtggtgtggtagggttaaagccaact 61 ||||||||||||||||| || || ||||| ||||||||||||||||||||||||||||| Sbjct: 42847 acaggtggaagtgtgagacagccagcatcattttgtggtgtggtagggttaaagccaacc 42788 Query: 62 tatggccgggtatctcgttttggcctcatggcttatgcttcatcactggatgttgtggga 121 ||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 42787 tatggccgggtttctcgtttcggcctcatggcttatgcttcatcactagatgttgtggga 42728 Query: 122 tgctttggatcatcagtttttgacactgcaaccatattgtctgtcattgctggccatgac 181 |||||||| ||||||||| |||||||||| || || ||||| || ||||||||||||||| Sbjct: 42727 tgctttggttcatcagttgttgacactgcgacaatcttgtcagtaattgctggccatgac 42668 Query: 182 aaaatggattcaaccagcagctctcatg 209 |||||||||||||| || |||||||||| Sbjct: 42667 aaaatggattcaactagtagctctcatg 42640 Score = 147 bits (74), Expect = 5e-32 Identities = 80/82 (97%) Strand = Plus / Minus Query: 558 aggtcaaaatgagaattttgatgggaacttatgcattatctgctggatactatgatgcat 617 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 41373 aggtcaaaatgagaattttgatgggaacttatgctttatctgctggatactatgatgcat 41314 Query: 618 actacaaacgagcgcaacaggt 639 ||||||||||||| |||||||| Sbjct: 41313 actacaaacgagcacaacaggt 41292 Score = 143 bits (72), Expect = 8e-31 Identities = 156/184 (84%) Strand = Plus / Minus Query: 209 gatgttccagactatagatcagacttggcatctctaagtttactagaatcaaaaccatta 268 |||||| ||||||||| |||||| |||| | ||| ||| |||||||||||||||||| Sbjct: 42077 gatgtttcagactataaatcagagttggtcccactagatttgctagaatcaaaaccatta 42018 Query: 269 aataatgtgagaattgggattatccaagaaactcttggagagggtgtggatgctggagtc 328 ||| | |||||||||| ||||| |||||||||||||| |||||||| || |||||||| Sbjct: 42017 aatggtatgagaattggaattattcaagaaactcttggtgagggtgtagaaactggagtc 41958 Query: 329 atatcatcaatcagggctgctgcttcgcatctggaacagctaggatcggtggtggaagag 388 ||||||||||||| || ||||||||| || ||||||| | ||||| |||||||||||| Sbjct: 41957 atatcatcaatcaaggatgctgcttctcacttggaacaattgggatcagtggtggaagag 41898 Query: 389 gttt 392 |||| Sbjct: 41897 gttt 41894 Score = 101 bits (51), Expect = 3e-18 Identities = 87/99 (87%) Strand = Plus / Minus Query: 387 aggtttcgatgccttcattttctcttggcttgccagcatattacatattggcctcttctg 446 ||||||| |||||||||||||||||||| | || |||||||||||| |||| || |||| Sbjct: 41803 aggtttctctgccttcattttctcttggcctacccgcatattacatactggcttcatctg 41744 Query: 447 aagcctcatctaatttgtcacgctatgatggcatcaggt 485 ||||||| |||||| | |||||||||||||| ||||||| Sbjct: 41743 aagcctcttctaatctatcacgctatgatggtatcaggt 41705 Score = 65.9 bits (33), Expect = 2e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 481 caggtatgggcggcaggtttcggctgatgacttgaatgagctctacggaaattcccgggc 540 |||||||||| |||||||||| | ||||||||||||||| || || ||| ||||||||| Sbjct: 41625 caggtatgggaggcaggtttcaggtgatgacttgaatgaactttatggaggttcccgggc 41566 Query: 541 tagtggtctcggtcatgaggt 561 || ||||| ||||| ||||| Sbjct: 41565 taacggtctgggtcacgaggt 41545
>emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G05, complete sequence Length = 142556 Score = 278 bits (140), Expect = 2e-71 Identities = 191/208 (91%) Strand = Plus / Minus Query: 2 acaggtggaagtgtgaggcaaccggcatcgttttgtggtgtggtagggttaaagccaact 61 ||||||||||||||||| || || ||||| ||||||||||||||||||||||||||||| Sbjct: 34983 acaggtggaagtgtgagacagccagcatcattttgtggtgtggtagggttaaagccaacc 34924 Query: 62 tatggccgggtatctcgttttggcctcatggcttatgcttcatcactggatgttgtggga 121 ||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 34923 tatggccgggtttctcgtttcggcctcatggcttatgcttcatcactagatgttgtggga 34864 Query: 122 tgctttggatcatcagtttttgacactgcaaccatattgtctgtcattgctggccatgac 181 |||||||| ||||||||| |||||||||| || || ||||| || ||||||||||||||| Sbjct: 34863 tgctttggttcatcagttgttgacactgcgacaatcttgtcagtaattgctggccatgac 34804 Query: 182 aaaatggattcaaccagcagctctcatg 209 |||||||||||||| || |||||||||| Sbjct: 34803 aaaatggattcaactagtagctctcatg 34776 Score = 147 bits (74), Expect = 5e-32 Identities = 80/82 (97%) Strand = Plus / Minus Query: 558 aggtcaaaatgagaattttgatgggaacttatgcattatctgctggatactatgatgcat 617 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 33509 aggtcaaaatgagaattttgatgggaacttatgctttatctgctggatactatgatgcat 33450 Query: 618 actacaaacgagcgcaacaggt 639 ||||||||||||| |||||||| Sbjct: 33449 actacaaacgagcacaacaggt 33428 Score = 143 bits (72), Expect = 8e-31 Identities = 156/184 (84%) Strand = Plus / Minus Query: 209 gatgttccagactatagatcagacttggcatctctaagtttactagaatcaaaaccatta 268 |||||| ||||||||| |||||| |||| | ||| ||| |||||||||||||||||| Sbjct: 34213 gatgtttcagactataaatcagagttggtcccactagatttgctagaatcaaaaccatta 34154 Query: 269 aataatgtgagaattgggattatccaagaaactcttggagagggtgtggatgctggagtc 328 ||| | |||||||||| ||||| |||||||||||||| |||||||| || |||||||| Sbjct: 34153 aatggtatgagaattggaattattcaagaaactcttggtgagggtgtagaaactggagtc 34094 Query: 329 atatcatcaatcagggctgctgcttcgcatctggaacagctaggatcggtggtggaagag 388 ||||||||||||| || ||||||||| || ||||||| | ||||| |||||||||||| Sbjct: 34093 atatcatcaatcaaggatgctgcttctcacttggaacaattgggatcagtggtggaagag 34034 Query: 389 gttt 392 |||| Sbjct: 34033 gttt 34030 Score = 93.7 bits (47), Expect = 7e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 387 aggtttcgatgccttcattttctcttggcttgccagcatattacatattggcctcttctg 446 ||||||| |||||||||||||||||||| | || |||||||||||| |||| || |||| Sbjct: 33939 aggtttctctgccttcattttctcttggcctacccgcatattacatactggcttcatctg 33880 Query: 447 aagcctcatctaatttgtcacgctatgatggcatcaggt 485 ||||||| |||||| | ||||| |||||||| ||||||| Sbjct: 33879 aagcctcttctaatctatcacgttatgatggtatcaggt 33841 Score = 58.0 bits (29), Expect = 4e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 481 caggtatgggcggcaggtttcggctgatgacttgaatgagctctacggaaattcccgggc 540 |||||||||| |||||||||| | |||||||||||||| || || ||| ||||||||| Sbjct: 33761 caggtatgggaggcaggtttcaggcgatgacttgaatgaactttatggaggttcccgggc 33702 Query: 541 tagtggtctcggtcatgaggt 561 || ||||| ||||| ||||| Sbjct: 33701 taacggtctgggtcacgaggt 33681
>emb|CT009528.9| M.truncatula DNA sequence from clone MTH2-168J23 on chromosome 3, complete sequence Length = 129215 Score = 83.8 bits (42), Expect = 7e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 558 aggtcaaaatgagaattttgatgggaacttatgcattatctgctggatactatgatgcat 617 |||| |||||||||||||||||||| || ||||| | || ||||| ||||||||||||| Sbjct: 65674 aggtgaaaatgagaattttgatggggacatatgccctttcagctggttactatgatgcat 65733 Query: 618 actacaaacgagcgcaacaggt 639 | |||||||||||||| ||||| Sbjct: 65734 attacaaacgagcgcagcaggt 65755 Score = 73.8 bits (37), Expect = 6e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 5 ggtggaagtgtgaggcaaccggcatcgttttgtggtgtggtagggttaaagccaacttat 64 ||||||||||||||||| |||||||| ||||| ||||| ||||| || |||||||| ||| Sbjct: 64483 ggtggaagtgtgaggcagccggcatcattttgcggtgtcgtaggtttgaagccaacatat 64542 Query: 65 ggccgggtatctcgttttggcctcatggcttatgcttcatc 105 || || || || | ||||| |||||||| ||||| ||||| Sbjct: 64543 gggcgcgtctcaagatttggactcatggcgtatgcgtcatc 64583
>ref|NM_113465.2| Arabidopsis thaliana amidase/ glutamyl-tRNA(Gln) amidotransferase AT3G25660 mRNA, complete cds Length = 1973 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 557 gaggtcaaaatgagaattttgatgggaacttatgcattatctgctggatactatgatgca 616 ||||| |||||||||||||| ||||| || |||||| | ||||| || ||||| ||||| Sbjct: 1349 gaggtgaaaatgagaattttaatggggacatatgcactttctgcgggttactacgatgct 1408 Query: 617 tactacaaacgagcgcaacaggtgaggac 645 |||||||| ||||| |||||||||||||| Sbjct: 1409 tactacaagcgagctcaacaggtgaggac 1437 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 5 ggtggaagtgtgaggcaaccggcatcgttttgtggtgtggtagggttaaagccaacttat 64 |||||||||||||| || || || |||||||||||||| ||||| | ||||| |||||| Sbjct: 797 ggtggaagtgtgagacagccagcttcgttttgtggtgttgtaggtcttaagccgacttat 856 Query: 65 ggccgggtatctcgttttggcctcatggcttatgc 99 || || || ||| | ||||| || ||||||||||| Sbjct: 857 gggcgtgtttctaggtttgggcttatggcttatgc 891
>gb|BT000644.1| Arabidopsis thaliana glutamyl-tRNA amidotransferase subunit A, putative (At3g25660/T5M7_8) mRNA, complete cds Length = 1614 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 557 gaggtcaaaatgagaattttgatgggaacttatgcattatctgctggatactatgatgca 616 ||||| |||||||||||||| ||||| || |||||| | ||||| || ||||| ||||| Sbjct: 1189 gaggtgaaaatgagaattttaatggggacatatgcactttctgcgggttactacgatgct 1248 Query: 617 tactacaaacgagcgcaacaggtgaggac 645 |||||||| ||||| |||||||||||||| Sbjct: 1249 tactacaagcgagctcaacaggtgaggac 1277 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 5 ggtggaagtgtgaggcaaccggcatcgttttgtggtgtggtagggttaaagccaacttat 64 |||||||||||||| || || || |||||||||||||| ||||| | ||||| |||||| Sbjct: 637 ggtggaagtgtgagacagccagcttcgttttgtggtgttgtaggtcttaagccgacttat 696 Query: 65 ggccgggtatctcgttttggcctcatggcttatgc 99 || || || ||| | ||||| || ||||||||||| Sbjct: 697 gggcgtgtttctaggtttgggcttatggcttatgc 731
>gb|AY045664.1| Arabidopsis thaliana AT3g25660/T5M7_8 mRNA, complete cds Length = 1892 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 557 gaggtcaaaatgagaattttgatgggaacttatgcattatctgctggatactatgatgca 616 ||||| |||||||||||||| ||||| || |||||| | ||||| || ||||| ||||| Sbjct: 1351 gaggtgaaaatgagaattttaatggggacatatgcactttctgcgggttactacgatgct 1410 Query: 617 tactacaaacgagcgcaacaggtgaggac 645 |||||||| ||||| |||||||||||||| Sbjct: 1411 tactacaagcgagctcaacaggtgaggac 1439 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 5 ggtggaagtgtgaggcaaccggcatcgttttgtggtgtggtagggttaaagccaacttat 64 |||||||||||||| || || || |||||||||||||| ||||| | ||||| |||||| Sbjct: 799 ggtggaagtgtgagacagccagcttcgttttgtggtgttgtaggtcttaagccgacttat 858 Query: 65 ggccgggtatctcgttttggcctcatggcttatgc 99 || || || ||| | ||||| || ||||||||||| Sbjct: 859 gggcgtgtttctaggtttgggcttatggcttatgc 893
>emb|BX824008.1|CNS0A6YU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH14ZC07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1845 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 557 gaggtcaaaatgagaattttgatgggaacttatgcattatctgctggatactatgatgca 616 ||||| |||||||||||||| ||||| || |||||| | ||||| || ||||| ||||| Sbjct: 1335 gaggtgaaaatgagaattttaatggggacatatgcactttctgcgggttactacgatgct 1394 Query: 617 tactacaaacgagcgcaacaggtgaggac 645 |||||||| ||||| |||||||||||||| Sbjct: 1395 tactacaagcgagctcaacaggtgaggac 1423 Score = 42.1 bits (21), Expect = 2.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 5 ggtggaagtgtgaggcaaccggcatcgttttgtggtgtggtagggttaaagccaacttat 64 ||||||||||||| || || || ||||||||||||| ||||| | ||||| |||||| Sbjct: 781 ggtggaagtgtgaaacagccagcttcgttttgtggtgctgtaggtcttaagccgacttat 840 Query: 65 ggccg 69 ||||| Sbjct: 841 ggccg 845
>gb|AF224745.1|AF224745 Arabidopsis thaliana Glu-tRNA(Gln) amidotransferase subunit A mRNA, complete cds; nuclear gene for chloroplast product Length = 1849 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 557 gaggtcaaaatgagaattttgatgggaacttatgcattatctgctggatactatgatgca 616 ||||| |||||||||||||| ||||| || |||||| | ||||| || ||||| ||||| Sbjct: 1334 gaggtgaaaatgagaattttaatggggacatatgcactttctgcgggttactacgatgct 1393 Query: 617 tactacaaacgagcgcaacaggtgaggac 645 |||||||| ||||| |||||||||||||| Sbjct: 1394 tactacaagcgagctcaacaggtgaggac 1422 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 5 ggtggaagtgtgaggcaaccggcatcgttttgtggtgtggtagggttaaagccaacttat 64 |||||||||||||| || || || |||||||||||||| ||||| | ||||| |||||| Sbjct: 782 ggtggaagtgtgagacagccagcttcgttttgtggtgttgtaggtcttaagccgacttat 841 Query: 65 ggccgggtatctcgttttggcctcatggcttatgc 99 || || || ||| | ||||| || ||||||||||| Sbjct: 842 gggcgtgtttctaggtttgggcttatggcttatgc 876
>dbj|AP001313.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:T5M7 Length = 65177 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 558 aggtcaaaatgagaattttgatgggaacttatgcattatctgctggatactatgatgcat 617 |||| |||||||||||||| ||||| || |||||| | ||||| || ||||| ||||| | Sbjct: 42186 aggtgaaaatgagaattttaatggggacatatgcactttctgcgggttactacgatgctt 42127 Query: 618 actacaaacgagcgcaacaggt 639 ||||||| ||||| |||||||| Sbjct: 42126 actacaagcgagctcaacaggt 42105 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 5 ggtggaagtgtgaggcaaccggcatcgttttgtggtgtggtagggttaaagccaacttat 64 |||||||||||||| || || || |||||||||||||| ||||| | ||||| |||||| Sbjct: 43073 ggtggaagtgtgagacagccagcttcgttttgtggtgttgtaggtcttaagccgacttat 43014 Query: 65 ggccgggtatctcgttttggcctcatggcttatgc 99 || || || ||| | ||||| || ||||||||||| Sbjct: 43013 gggcgtgtttctaggtttgggcttatggcttatgc 42979
>gb|AC141884.4| Mus musculus BAC clone RP24-129E6 from chromosome 14, complete sequence Length = 174973 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 255 aatcaaaaccattaaataatgtgagaa 281 ||||||||||||| ||||||||||||| Sbjct: 61220 aatcaaaaccatttaataatgtgagaa 61246
>gb|AC164553.2| Mus musculus BAC clone RP23-361L12 from chromosome 14, complete sequence Length = 217754 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 255 aatcaaaaccattaaataatgtgagaa 281 ||||||||||||| ||||||||||||| Sbjct: 3774 aatcaaaaccatttaataatgtgagaa 3800
>emb|CT030704.5| Mouse DNA sequence from clone RP24-317K15 on chromosome 14, complete sequence Length = 161533 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 255 aatcaaaaccattaaataatgtgagaa 281 ||||||||||||| ||||||||||||| Sbjct: 61462 aatcaaaaccatttaataatgtgagaa 61436
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome Length = 2174500 Score = 44.1 bits (22), Expect = 0.57 Identities = 52/62 (83%) Strand = Plus / Minus Query: 5 ggtggaagtgtgaggcaaccggcatcgttttgtggtgtggtagggttaaagccaacttat 64 ||||||||||| || ||||| || || |||||||| || ||||| || || ||||||||| Sbjct: 1414202 ggtggaagtgttagacaacctgcttcattttgtggagttgtaggatttaaaccaacttat 1414143 Query: 65 gg 66 || Sbjct: 1414142 gg 1414141
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 569 agaattttgatgggaacttatgcattatctgctggatactatgatgcatacta 621 ||||||||||| ||||||||||| || || || |||||| ||| |||||||| Sbjct: 788737 agaattttgataggaacttatgctttgtccgcaggatacagtgacgcatacta 788789
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 44 gtagggttaaagccaacttatggccgggtatctcgtt 80 ||||| ||||| ||||||||||| || |||||||||| Sbjct: 341677 gtaggtttaaaaccaacttatggacgcgtatctcgtt 341713
>gb|AC111378.6| Rattus norvegicus 4 BAC CH230-126E21 (Children's Hospital Oakland Research Institute) complete sequence Length = 171142 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 263 ccattaaataatgtgagaatt 283 ||||||||||||||||||||| Sbjct: 4087 ccattaaataatgtgagaatt 4067
>gb|AC087218.2| Rattus norvegicus strain Brown Norway clone RP31-249D7, complete sequence Length = 144201 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 ccattaaataatgtgagaatt 283 ||||||||||||||||||||| Sbjct: 33441 ccattaaataatgtgagaatt 33461
>ref|XM_539054.2| PREDICTED: Canis familiaris similar to ubiquitin specific protease 45, transcript variant 1 (LOC481933), mRNA Length = 2391 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 581 ggaacttatgcattatctgctggat 605 ||||||| ||||||||||||||||| Sbjct: 885 ggaacttctgcattatctgctggat 909
>ref|XM_863097.1| PREDICTED: Canis familiaris similar to ubiquitin specific protease 45, transcript variant 2 (LOC481933), mRNA Length = 2253 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 581 ggaacttatgcattatctgctggat 605 ||||||| ||||||||||||||||| Sbjct: 885 ggaacttctgcattatctgctggat 909
>emb|AL158175.7| Human DNA sequence from clone RP11-359G22 on chromosome 20 Contains the KRT18P3 gene for keratin 18 pseudogene 3 and a novel gene, complete sequence Length = 86025 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 302 cttggagagggtgtggatgctggag 326 |||||||||||||||||||| |||| Sbjct: 10394 cttggagagggtgtggatgcaggag 10418
>gb|AC147482.2| Medicago truncatula chromosome 7 BAC clone mth2-93e11, complete sequence Length = 119127 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 159 tgtctgtcattgctggccatgacaa 183 ||||| ||||||||||||||||||| Sbjct: 70096 tgtctctcattgctggccatgacaa 70072
>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold Length = 1888123 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 ccattaaataatgtgagaatt 283 ||||||||||||||||||||| Sbjct: 1698643 ccattaaataatgtgagaatt 1698663
>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome Length = 2427734 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 tggtggaagaggtttcgatg 397 |||||||||||||||||||| Sbjct: 2005088 tggtggaagaggtttcgatg 2005069
>ref|XM_632820.1| Dictyostelium discoideum hypothetical protein (DDB0186788), partial mRNA Length = 2226 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 aatcaaaaccattaaataat 274 |||||||||||||||||||| Sbjct: 1265 aatcaaaaccattaaataat 1284
>gb|AF147806.2| Gallid herpesvirus 2, complete genome Length = 174077 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 atggcatcaggtatgggcgg 493 |||||||||||||||||||| Sbjct: 113307 atggcatcaggtatgggcgg 113326
>ref|XM_963638.1| PREDICTED: Tribolium castaneum similar to Innexin inx7 (Innexin-7) (Gap junction protein prp7) (Pas-related protein 7) (LOC657166), mRNA Length = 1206 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ttggatcatcagtttttgac 145 |||||||||||||||||||| Sbjct: 667 ttggatcatcagtttttgac 686
>emb|CR925991.1| Pongo pygmaeus mRNA; cDNA DKFZp459M2020 (from clone DKFZp459M2020) Length = 2169 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 137 gtttttgacactgcaaccatattg 160 ||||||| |||||||||||||||| Sbjct: 1522 gtttttgtcactgcaaccatattg 1545
>emb|BX647299.1|HSM807443 Homo sapiens mRNA; cDNA DKFZp781L0441 (from clone DKFZp781L0441) Length = 1950 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 catcagtttttgacactgca 151 |||||||||||||||||||| Sbjct: 1776 catcagtttttgacactgca 1795
>dbj|AK123415.1| Homo sapiens cDNA FLJ41421 fis, clone BRHIP2002664 Length = 2184 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 catcagtttttgacactgca 151 |||||||||||||||||||| Sbjct: 712 catcagtttttgacactgca 731
>gb|AY510475.1| Gallid herpesvirus 2 clone Md11BAC replication intermediate, complete genome Length = 170950 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 atggcatcaggtatgggcgg 493 |||||||||||||||||||| Sbjct: 125384 atggcatcaggtatgggcgg 125403
>gb|AY033395.1| Thermotoga neapolitana beta-mannosidase Man2 (man2) gene, complete cds Length = 2364 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 catcgttttgtggtgtggta 46 |||||||||||||||||||| Sbjct: 1230 catcgttttgtggtgtggta 1249
>gb|AC182392.2| Pan troglodytes BAC clone CH251-499D13 from chromosome 2, complete sequence Length = 159910 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 574 tttgatgggaacttatgcattatctgct 601 |||||||| ||||||||||| ||||||| Sbjct: 65029 tttgatggaaacttatgcatgatctgct 65002
>emb|BX294186.9| Zebrafish DNA sequence from clone DKEY-170O10 in linkage group 5, complete sequence Length = 143396 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 aaaccattaaataatgtgag 279 |||||||||||||||||||| Sbjct: 110329 aaaccattaaataatgtgag 110348
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 cggtggtggaagaggtttcg 394 |||||||||||||||||||| Sbjct: 10760547 cggtggtggaagaggtttcg 10760566
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 gatgccttcattttctcttg 413 |||||||||||||||||||| Sbjct: 28947447 gatgccttcattttctcttg 28947428
>gb|AF243438.1|AF243438 Gallid herpesvirus 2 serotype 1 isolate Md5, complete genome Length = 177874 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 atggcatcaggtatgggcgg 493 |||||||||||||||||||| Sbjct: 114806 atggcatcaggtatgggcgg 114825
>gb|AC107027.9| Homo sapiens 3 BAC RP11-517B11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 171562 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 catcagtttttgacactgca 151 |||||||||||||||||||| Sbjct: 126515 catcagtttttgacactgca 126534
>gb|AC167669.1| Mus musculus BAC clone RP24-138L8 from chromosome 13, complete sequence Length = 202905 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 449 gcctcatctaatttgtcacgctatgatg 476 |||| |||||||||| |||||||||||| Sbjct: 52124 gcctaatctaatttgacacgctatgatg 52097
>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0060O17 Length = 180015 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 gatgccttcattttctcttg 413 |||||||||||||||||||| Sbjct: 64984 gatgccttcattttctcttg 64965
>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0085I16 Length = 141701 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 cggtggtggaagaggtttcg 394 |||||||||||||||||||| Sbjct: 97165 cggtggtggaagaggtttcg 97184
>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome Length = 1884661 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 445 tgaagcctcatctaatttgtcacg 468 ||||||||||||||| |||||||| Sbjct: 1517801 tgaagcctcatctaacttgtcacg 1517778
>emb|AL355101.2|CNS05TCK Human chromosome 14 DNA sequence BAC R-686H21 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 164380 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 137 gtttttgacactgcaaccatattg 160 ||||||| |||||||||||||||| Sbjct: 107605 gtttttgtcactgcaaccatattg 107628
>emb|CT025639.13| Mouse DNA sequence from clone RP23-233I11 on chromosome 13, complete sequence Length = 219226 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 449 gcctcatctaatttgtcacgctatgatg 476 |||| |||||||||| |||||||||||| Sbjct: 48738 gcctaatctaatttgacacgctatgatg 48765
>emb|AL627183.16| Mouse DNA sequence from clone RP23-345H2 on chromosome 4, complete sequence Length = 216153 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 282 ttgggattatccaagaaactcttg 305 |||||| ||||||||||||||||| Sbjct: 67438 ttgggagtatccaagaaactcttg 67415 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,983,548 Number of Sequences: 3902068 Number of extensions: 5983548 Number of successful extensions: 114671 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 49 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 114401 Number of HSP's gapped (non-prelim): 267 length of query: 648 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 625 effective length of database: 17,143,297,704 effective search space: 10714561065000 effective search space used: 10714561065000 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
