ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags29f16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK064743.1| Oryza sativa (japonica cultivar-group) cDNA clon... 454 e-124
2gb|AY108408.1| Zea mays PCO100871 mRNA sequence 351 2e-93
3ref|XM_475282.1| Oryza sativa (japonica cultivar-group), predic... 216 6e-53
4dbj|AK102235.1| Oryza sativa (japonica cultivar-group) cDNA clon... 216 6e-53
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 153 8e-34
6dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic D... 153 8e-34
7dbj|AP003566.3| Oryza sativa (japonica cultivar-group) genomic D... 153 8e-34
8ref|NM_190796.1| Oryza sativa (japonica cultivar-group), predic... 149 1e-32
9gb|AC108502.3| Oryza sativa (japonica cultivar-group) chromosome... 72 2e-09
10gb|AC105769.2| Oryza sativa (japonica cultivar-group) chromosome... 72 2e-09
11dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
12ref|NM_124374.3| Arabidopsis thaliana catalytic AT5G49950 mRNA, ... 54 6e-04
13gb|AY081700.1| Arabidopsis thaliana unknown protein (At5g49950) ... 54 6e-04
14gb|AF370514.1|AF370514 Arabidopsis thaliana Unknown protein (K9P... 54 6e-04
15emb|BX831526.1|CNS09YVA Arabidopsis thaliana Full-length cDNA Co... 54 6e-04
16dbj|AB024032.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 54 6e-04
17emb|BX834057.1|CNS0A0K4 Arabidopsis thaliana Full-length cDNA Co... 50 0.009
18emb|BX831112.1|CNS0A0PV Arabidopsis thaliana Full-length cDNA Co... 48 0.034
19ref|XM_749523.1| Aspergillus fumigatus Af293 hypothetical protei... 42 2.1
20gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 42 2.1
21dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 42 2.1
22gb|U14003.1|ECOUW93 Escherichia coli K-12 chromosomal region fro... 42 2.1
23dbj|AP006652.1| Lotus japonicus genomic DNA, chromosome 6, clone... 42 2.1
24gb|CP000034.1| Shigella dysenteriae Sd197, complete genome 42 2.1
25gb|CP000036.1| Shigella boydii Sb227, complete genome 42 2.1
26gb|CP000038.1| Shigella sonnei Ss046, complete genome 42 2.1
27gb|M69185.1|ECOSLTY Escherichia coli soluble lytic transglycogen... 42 2.1
28gb|AC162528.5| Mus musculus BAC clone RP23-4P1 from chromosome 5... 40 8.4
29gb|AC151577.2| Mus musculus BAC clone RP23-371D23 from chromosom... 40 8.4
30gb|BT018421.1| Zea mays clone EL01N0360A04.d mRNA sequence 40 8.4
31gb|AY246561.1| Branchiostoma floridae cosmid MPMGc117J2370Q6, pa... 40 8.4
32gb|AC132089.3| Mus musculus BAC clone RP24-426D18 from chromosom... 40 8.4
33gb|AC098882.3| Mus musculus BAC clone RP23-122D13 from 12, compl... 40 8.4
34emb|Z26590.1|MV4LYSAB Bacteriophage mv4 lysA and lysB genes 40 8.4
35emb|AL672236.18| Mouse DNA sequence from clone RP23-206L21 on ch... 40 8.4
36gb|AC159211.2| Mus musculus BAC clone RP23-33F21 from chromosome... 40 8.4
37gb|AC023687.3| Drosophila melanogaster X BAC RP98-36C7 (Roswell ... 40 8.4
38gb|AC007071.7| Arabidopsis thaliana chromosome 2 clone T9H9 map ... 40 8.4
39gb|AC023690.3| Drosophila melanogaster X BAC RP98-6M20 (Roswell ... 40 8.4
40emb|CR385036.3| Human DNA sequence from clone WI2-2890K7 on chro... 40 8.4
41gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 8.4
42ref|NM_208058.1| Eremothecium gossypii AAR162Cp (AAR162C), mRNA 40 8.4
43gb|AE003488.3| Drosophila melanogaster chromosome X, section 40 ... 40 8.4
44emb|AL591417.9| Mouse DNA sequence from clone RP23-272C1 on chro... 40 8.4
45emb|AJ510210.1|ATH510210 Arabidopsis thaliana ari7 gene for ARIA... 40 8.4
46gb|AC140337.3| Mus musculus BAC clone RP23-238H7 from 1, complet... 40 8.4
47emb|AL662887.13| Mouse DNA sequence from clone RP23-400P17 on ch... 40 8.4 
>dbj|AK064743.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-E01, full
            insert sequence
          Length = 2017

 Score =  454 bits (229), Expect = e-124
 Identities = 430/497 (86%)
 Strand = Plus / Plus

                                                                        
Query: 13   aagggctatgcaaagctgcatcaacctatcttggctcgccttgcaaactgggagggtatt 72
            ||||| ||||||||||||||| ||||| | |||| |||  ||||||| ||||| ||||||
Sbjct: 1049 aagggatatgcaaagctgcatgaacctgtgttggttcgaattgcaaattgggaaggtatt 1108

                                                                        
Query: 73   aataagtcacgctctattcgggagtttgaccaccatgccacttgcattgttgcaaaatat 132
            || |||||||||||||| ||||| ||||||||||||||||| ||||| ||||||||||||
Sbjct: 1109 aaaaagtcacgctctatccgggaatttgaccaccatgccacctgcatggttgcaaaatat 1168

                                                                        
Query: 133  gagactgtggatacctactaccgccggtgcagcagcgctagttttgttggtaatgtgtca 192
            ||||| || ||||||||||||||||| |||||||| || |||| ||||||||||||||||
Sbjct: 1169 gagacagtagatacctactaccgccgttgcagcagtgccagttatgttggtaatgtgtca 1228

                                                                        
Query: 193  gttcccttgctttgtgtaaatgctttggatgaccccgtttgcacaagagaggcaattcct 252
            ||||||||||| ||||| |||||||||||||||||| | |||||||| ||||| || |||
Sbjct: 1229 gttcccttgctatgtgtcaatgctttggatgaccccctctgcacaagggaggccatccct 1288

                                                                        
Query: 253  tgggatgaatgcagagcgaataagaacattgttttggcgactactcagaatggtggccat 312
            |||||||| ||||| || || ||||||||||||||||| ||||||| |||||| || |||
Sbjct: 1289 tgggatgagtgcagggccaacaagaacattgttttggctactactccgaatggcggtcat 1348

                                                                        
Query: 313  cttgcattttttcaaggactaactgctggaaaactatggtgggttggagctgtgtctgag 372
            |||||||| |||||||||||||||||||||| |||||||||||| |||||||| ||||||
Sbjct: 1349 cttgcattctttcaaggactaactgctggaagactatggtgggtcggagctgtttctgag 1408

                                                                        
Query: 373  ttcctctgtgctctgcatgacagctcgtacatgcatcggcaaaaggcggaagatcatgtt 432
            |||||||  ||||||| ||||||    |||||||||| |||||||||  |||| ||| ||
Sbjct: 1409 ttcctcttcgctctgcttgacagtaaatacatgcatcagcaaaaggcacaagaccatatt 1468

                                                                        
Query: 433  ctacattcttcactggagtcgtccattgacaagagcccgtacgtcagcatccttggagac 492
             | | ||||||  ||||||||||||| || |||||||| || |||| | || | | ||| 
Sbjct: 1469 ttgcgttcttccttggagtcgtccatcgataagagcccatatgtcaacgtcatggaagat 1528

                             
Query: 493  ggaatgatagccccggt 509
            ||||||||||| |||||
Sbjct: 1529 ggaatgatagctccggt 1545
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>gb|AY108408.1| Zea mays PCO100871 mRNA sequence
          Length = 1119

 Score =  351 bits (177), Expect = 2e-93
 Identities = 330/381 (86%)
 Strand = Plus / Plus

                                                                       
Query: 52  cttgcaaactgggagggtattaataagtcacgctctattcgggagtttgaccaccatgcc 111
           |||||||| ||||| |||||||| |||||||| ||||| || ||||||||||||||||| 
Sbjct: 11  cttgcaaattgggaaggtattaaaaagtcacgatctatccgagagtttgaccaccatgct 70

                                                                       
Query: 112 acttgcattgttgcaaaatatgagactgtggatacctactaccgccggtgcagcagcgct 171
           |||||  ||||  ||| ||||||||| |||||||||||||| ||||||||||| || |||
Sbjct: 71  acttgtgttgtctcaagatatgagacagtggatacctactatcgccggtgcagtagtgct 130

                                                                       
Query: 172 agttttgttggtaatgtgtcagttcccttgctttgtgtaaatgctttggatgaccccgtt 231
           ||||  || || |||||||||||||||||||||||| | |||||||||||||| ||  ||
Sbjct: 131 agttacgtcggaaatgtgtcagttcccttgctttgtatcaatgctttggatgatcctctt 190

                                                                       
Query: 232 tgcacaagagaggcaattccttgggatgaatgcagagcgaataagaacattgttttggcg 291
           |||||||| ||||| |||||||||||||||||||| || ||||||||||||||||| || 
Sbjct: 191 tgcacaagggaggctattccttgggatgaatgcagggccaataagaacattgttttagca 250

                                                                       
Query: 292 actactcagaatggtggccatcttgcattttttcaaggactaactgctggaaaactatgg 351
           |||||||  |||||||| ||||||||||| |||||||||||||||||  | | |||||||
Sbjct: 251 actactccaaatggtggtcatcttgcattctttcaaggactaactgcgcggagactatgg 310

                                                                       
Query: 352 tgggttggagctgtgtctgagttcctctgtgctctgcatgacagctcgtacatgcatcgg 411
           ||||||||||||   ||||||||||| | |||||| ||||||||||| ||||||||| ||
Sbjct: 311 tgggttggagctacttctgagttcctttctgctcttcatgacagctcctacatgcatagg 370

                                
Query: 412 caaaaggcggaagatcatgtt 432
           || |||||  | |||||||||
Sbjct: 371 cagaaggcaaatgatcatgtt 391
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>ref|XM_475282.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1746

 Score =  216 bits (109), Expect = 6e-53
 Identities = 328/401 (81%)
 Strand = Plus / Plus

                                                                        
Query: 19   tatgcaaagctgcatcaacctatcttggctcgccttgcaaactgggagggtattaataag 78
            |||||||| || || |||||  |||||||  | ||||| |||||||| | |||||  |||
Sbjct: 871  tatgcaaaactacaccaacccgtcttggcaagacttgctaactgggaagatattagaaag 930

                                                                        
Query: 79   tcacgctctattcgggagtttgaccaccatgccacttgcattgttgcaaaatatgagact 138
            ||||| |||||  |||| || ||||  |||||||||||  | ||||||||||||||||| 
Sbjct: 931  tcacgatctatcagggaattcgaccgtcatgccacttgtgtggttgcaaaatatgagaca 990

                                                                        
Query: 139  gtggatacctactaccgccggtgcagcagcgctagttttgttggtaatgtgtcagttccc 198
            ||||| || | |||||| ||||||||||| || | ||   || ||||||||||||| |||
Sbjct: 991  gtggacacattctaccgtcggtgcagcagtgcaaattacattagtaatgtgtcagtgccc 1050

                                                                        
Query: 199  ttgctttgtgtaaatgctttggatgaccccgtttgcacaagagaggcaattccttgggat 258
             |||||||| | | |||| | ||||||||  |||||||||| ||||| ||||| ||||| 
Sbjct: 1051 ctgctttgtatcagtgctcttgatgacccactttgcacaagggaggccattccctgggac 1110

                                                                        
Query: 259  gaatgcagagcgaataagaacattgttttggcgactactcagaatggtggccatcttgca 318
            |||||||| || || || |||||||||||||| ||| | |  || |||||||||||||| 
Sbjct: 1111 gaatgcagggcaaacaaaaacattgttttggcaactgcacctaacggtggccatcttgcc 1170

                                                                        
Query: 319  ttttttcaaggactaactgctggaaaactatggtgggttggagctgtgtctgagttcctc 378
            ||||||||||| |||||||||||||| || |||||||| |||||||| |||||||| || 
Sbjct: 1171 ttttttcaagggctaactgctggaaagctgtggtgggtgggagctgtttctgagtttcta 1230

                                                     
Query: 379  tgtgctctgcatgacagctcgtacatgcatcggcaaaaggc 419
              |||||| ||||| ||| | | ||||||||||||||||||
Sbjct: 1231 cttgctctacatgatagcccctgcatgcatcggcaaaaggc 1271
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>dbj|AK102235.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088B21, full
            insert sequence
          Length = 2007

 Score =  216 bits (109), Expect = 6e-53
 Identities = 328/401 (81%)
 Strand = Plus / Plus

                                                                        
Query: 19   tatgcaaagctgcatcaacctatcttggctcgccttgcaaactgggagggtattaataag 78
            |||||||| || || |||||  |||||||  | ||||| |||||||| | |||||  |||
Sbjct: 940  tatgcaaaactacaccaacccgtcttggcaagacttgctaactgggaagatattagaaag 999

                                                                        
Query: 79   tcacgctctattcgggagtttgaccaccatgccacttgcattgttgcaaaatatgagact 138
            ||||| |||||  |||| || ||||  |||||||||||  | ||||||||||||||||| 
Sbjct: 1000 tcacgatctatcagggaattcgaccgtcatgccacttgtgtggttgcaaaatatgagaca 1059

                                                                        
Query: 139  gtggatacctactaccgccggtgcagcagcgctagttttgttggtaatgtgtcagttccc 198
            ||||| || | |||||| ||||||||||| || | ||   || ||||||||||||| |||
Sbjct: 1060 gtggacacattctaccgtcggtgcagcagtgcaaattacattagtaatgtgtcagtgccc 1119

                                                                        
Query: 199  ttgctttgtgtaaatgctttggatgaccccgtttgcacaagagaggcaattccttgggat 258
             |||||||| | | |||| | ||||||||  |||||||||| ||||| ||||| ||||| 
Sbjct: 1120 ctgctttgtatcagtgctcttgatgacccactttgcacaagggaggccattccctgggac 1179

                                                                        
Query: 259  gaatgcagagcgaataagaacattgttttggcgactactcagaatggtggccatcttgca 318
            |||||||| || || || |||||||||||||| ||| | |  || |||||||||||||| 
Sbjct: 1180 gaatgcagggcaaacaaaaacattgttttggcaactgcacctaacggtggccatcttgcc 1239

                                                                        
Query: 319  ttttttcaaggactaactgctggaaaactatggtgggttggagctgtgtctgagttcctc 378
            ||||||||||| |||||||||||||| || |||||||| |||||||| |||||||| || 
Sbjct: 1240 ttttttcaagggctaactgctggaaagctgtggtgggtgggagctgtttctgagtttcta 1299

                                                     
Query: 379  tgtgctctgcatgacagctcgtacatgcatcggcaaaaggc 419
              |||||| ||||| ||| | | ||||||||||||||||||
Sbjct: 1300 cttgctctacatgatagcccctgcatgcatcggcaaaaggc 1340
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  153 bits (77), Expect = 8e-34
 Identities = 113/125 (90%)
 Strand = Plus / Plus

                                                                            
Query: 142      gatacctactaccgccggtgcagcagcgctagttttgttggtaatgtgtcagttcccttg 201
                ||||||||||||||||| |||||||| || |||| |||||||||||||||||||||||||
Sbjct: 37762525 gatacctactaccgccgttgcagcagtgccagttatgttggtaatgtgtcagttcccttg 37762584

                                                                            
Query: 202      ctttgtgtaaatgctttggatgaccccgtttgcacaagagaggcaattccttgggatgaa 261
                || ||||| |||||||||||||||||| | |||||||| ||||| || ||||||||||| 
Sbjct: 37762585 ctatgtgtcaatgctttggatgaccccctctgcacaagggaggccatcccttgggatgag 37762644

                     
Query: 262      tgcag 266
                |||||
Sbjct: 37762645 tgcag 37762649



 Score =  109 bits (55), Expect = 1e-20
 Identities = 73/79 (92%)
 Strand = Plus / Plus

                                                                            
Query: 274      aagaacattgttttggcgactactcagaatggtggccatcttgcattttttcaaggacta 333
                ||||||||||||||||| ||||||| |||||| || ||||||||||| ||||||||||||
Sbjct: 37762738 aagaacattgttttggctactactccgaatggcggtcatcttgcattctttcaaggacta 37762797

                                   
Query: 334      actgctggaaaactatggt 352
                |||||||||| ||||||||
Sbjct: 37762798 actgctggaagactatggt 37762816



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                           
Query: 77       agtcacgctctattcgggagtttgaccaccatgccacttgcattgttgcaaaatatgag 135
                ||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 37762148 agtcacgctctatccgggaatttgaccaccatgccacttgcatggttgcaaaatatgag 37762206



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                            
Query: 350      ggtgggttggagctgtgtctgagttcctctgtgctctgcatgacagctcgtacatgcatc 409
                ||||||| |||||||| |||||||||||||  ||||||| ||||||    ||||||||||
Sbjct: 37762933 ggtgggtcggagctgtttctgagttcctcttcgctctgcttgacagtaaatacatgcatc 37762992

                         
Query: 410      ggcaaaagg 418
                 ||||||||
Sbjct: 37762993 agcaaaagg 37763001



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                            
Query: 446      tggagtcgtccattgacaagagcccgtacgtcagcatccttggagacggaatgatagccc 505
                ||||||||||||| || |||||||| || |||| | || | | ||| ||||||||||| |
Sbjct: 37763126 tggagtcgtccatcgataagagcccatatgtcaacgtcatggaagatggaatgatagctc 37763185

                    
Query: 506      cggt 509
                ||||
Sbjct: 37763186 cggt 37763189
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>dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0039A07
          Length = 148892

 Score =  153 bits (77), Expect = 8e-34
 Identities = 113/125 (90%)
 Strand = Plus / Plus

                                                                         
Query: 142   gatacctactaccgccggtgcagcagcgctagttttgttggtaatgtgtcagttcccttg 201
             ||||||||||||||||| |||||||| || |||| |||||||||||||||||||||||||
Sbjct: 90826 gatacctactaccgccgttgcagcagtgccagttatgttggtaatgtgtcagttcccttg 90885

                                                                         
Query: 202   ctttgtgtaaatgctttggatgaccccgtttgcacaagagaggcaattccttgggatgaa 261
             || ||||| |||||||||||||||||| | |||||||| ||||| || ||||||||||| 
Sbjct: 90886 ctatgtgtcaatgctttggatgaccccctctgcacaagggaggccatcccttgggatgag 90945

                  
Query: 262   tgcag 266
             |||||
Sbjct: 90946 tgcag 90950



 Score =  109 bits (55), Expect = 1e-20
 Identities = 73/79 (92%)
 Strand = Plus / Plus

                                                                         
Query: 274   aagaacattgttttggcgactactcagaatggtggccatcttgcattttttcaaggacta 333
             ||||||||||||||||| ||||||| |||||| || ||||||||||| ||||||||||||
Sbjct: 91039 aagaacattgttttggctactactccgaatggcggtcatcttgcattctttcaaggacta 91098

                                
Query: 334   actgctggaaaactatggt 352
             |||||||||| ||||||||
Sbjct: 91099 actgctggaagactatggt 91117



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                        
Query: 77    agtcacgctctattcgggagtttgaccaccatgccacttgcattgttgcaaaatatgag 135
             ||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 90449 agtcacgctctatccgggaatttgaccaccatgccacttgcatggttgcaaaatatgag 90507



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                         
Query: 350   ggtgggttggagctgtgtctgagttcctctgtgctctgcatgacagctcgtacatgcatc 409
             ||||||| |||||||| |||||||||||||  ||||||| ||||||    ||||||||||
Sbjct: 91234 ggtgggtcggagctgtttctgagttcctcttcgctctgcttgacagtaaatacatgcatc 91293

                      
Query: 410   ggcaaaagg 418
              ||||||||
Sbjct: 91294 agcaaaagg 91302



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                         
Query: 446   tggagtcgtccattgacaagagcccgtacgtcagcatccttggagacggaatgatagccc 505
             ||||||||||||| || |||||||| || |||| | || | | ||| ||||||||||| |
Sbjct: 91427 tggagtcgtccatcgataagagcccatatgtcaacgtcatggaagatggaatgatagctc 91486

                 
Query: 506   cggt 509
             ||||
Sbjct: 91487 cggt 91490
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>dbj|AP003566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0008G24
          Length = 152736

 Score =  153 bits (77), Expect = 8e-34
 Identities = 113/125 (90%)
 Strand = Plus / Plus

                                                                         
Query: 142   gatacctactaccgccggtgcagcagcgctagttttgttggtaatgtgtcagttcccttg 201
             ||||||||||||||||| |||||||| || |||| |||||||||||||||||||||||||
Sbjct: 21773 gatacctactaccgccgttgcagcagtgccagttatgttggtaatgtgtcagttcccttg 21832

                                                                         
Query: 202   ctttgtgtaaatgctttggatgaccccgtttgcacaagagaggcaattccttgggatgaa 261
             || ||||| |||||||||||||||||| | |||||||| ||||| || ||||||||||| 
Sbjct: 21833 ctatgtgtcaatgctttggatgaccccctctgcacaagggaggccatcccttgggatgag 21892

                  
Query: 262   tgcag 266
             |||||
Sbjct: 21893 tgcag 21897



 Score =  109 bits (55), Expect = 1e-20
 Identities = 73/79 (92%)
 Strand = Plus / Plus

                                                                         
Query: 274   aagaacattgttttggcgactactcagaatggtggccatcttgcattttttcaaggacta 333
             ||||||||||||||||| ||||||| |||||| || ||||||||||| ||||||||||||
Sbjct: 21986 aagaacattgttttggctactactccgaatggcggtcatcttgcattctttcaaggacta 22045

                                
Query: 334   actgctggaaaactatggt 352
             |||||||||| ||||||||
Sbjct: 22046 actgctggaagactatggt 22064



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                        
Query: 77    agtcacgctctattcgggagtttgaccaccatgccacttgcattgttgcaaaatatgag 135
             ||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 21396 agtcacgctctatccgggaatttgaccaccatgccacttgcatggttgcaaaatatgag 21454



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                         
Query: 350   ggtgggttggagctgtgtctgagttcctctgtgctctgcatgacagctcgtacatgcatc 409
             ||||||| |||||||| |||||||||||||  ||||||| ||||||    ||||||||||
Sbjct: 22181 ggtgggtcggagctgtttctgagttcctcttcgctctgcttgacagtaaatacatgcatc 22240

                      
Query: 410   ggcaaaagg 418
              ||||||||
Sbjct: 22241 agcaaaagg 22249



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                         
Query: 446   tggagtcgtccattgacaagagcccgtacgtcagcatccttggagacggaatgatagccc 505
             ||||||||||||| || |||||||| || |||| | || | | ||| ||||||||||| |
Sbjct: 22374 tggagtcgtccatcgataagagcccatatgtcaacgtcatggaagatggaatgatagctc 22433

                 
Query: 506   cggt 509
             ||||
Sbjct: 22434 cggt 22437
to top
>ref|NM_190796.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1356

 Score =  149 bits (75), Expect = 1e-32
 Identities = 111/123 (90%)
 Strand = Plus / Plus

                                                                        
Query: 13   aagggctatgcaaagctgcatcaacctatcttggctcgccttgcaaactgggagggtatt 72
            ||||| ||||||||||||||| ||||| | |||| ||| |||||||| ||||| ||||||
Sbjct: 922  aagggatatgcaaagctgcatgaacctgtgttggttcgacttgcaaattgggaaggtatt 981

                                                                        
Query: 73   aataagtcacgctctattcgggagtttgaccaccatgccacttgcattgttgcaaaatat 132
            || |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 982  aaaaagtcacgctctatccgggaatttgaccaccatgccacttgcatggttgcaaaatat 1041

               
Query: 133  gag 135
            |||
Sbjct: 1042 gag 1044



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                        
Query: 446  tggagtcgtccattgacaagagcccgtacgtcagcatccttggagacggaatgatagccc 505
            ||||||||||||| || |||||||| || |||| | || | | ||| ||||||||||| |
Sbjct: 1073 tggagtcgtccatcgataagagcccatatgtcaacgtcatggaagatggaatgatagctc 1132

                
Query: 506  cggt 509
            ||||
Sbjct: 1133 cggt 1136
to top
>gb|AC108502.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1378_A04,
             complete sequence
          Length = 103458

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                         
Query: 277   aacattgttttggcgactactcagaatggtggccatcttgcattttttcaaggactaact 336
             |||||||||||||| ||| | |  || |||||||||||||| ||||||||||| ||||||
Sbjct: 80316 aacattgttttggcaactgcacctaacggtggccatcttgccttttttcaagggctaact 80257

                     
Query: 337   gctggaaa 344
             ||||||||
Sbjct: 80256 gctggaaa 80249



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 96/117 (82%)
 Strand = Plus / Minus

                                                                         
Query: 150   ctaccgccggtgcagcagcgctagttttgttggtaatgtgtcagttcccttgctttgtgt 209
             |||||| ||||||||||| || | ||   || ||||||||||||| ||| |||||||| |
Sbjct: 80522 ctaccgtcggtgcagcagtgcaaattacattagtaatgtgtcagtgcccctgctttgtat 80463

                                                                      
Query: 210   aaatgctttggatgaccccgtttgcacaagagaggcaattccttgggatgaatgcag 266
              | |||| | ||||||||  |||||||||| ||||| ||||| ||||| ||||||||
Sbjct: 80462 cagtgctcttgatgacccactttgcacaagggaggccattccctgggacgaatgcag 80406



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                         
Query: 350   ggtgggttggagctgtgtctgagttcctctgtgctctgcatgacagctcgtacatgcatc 409
             ||||||| |||||||| |||||||| ||   |||||| ||||| ||| | | ||||||||
Sbjct: 79861 ggtgggtgggagctgtttctgagtttctacttgctctacatgatagcccctgcatgcatc 79802

                      
Query: 410   ggcaaaagg 418
             |||||||||
Sbjct: 79801 ggcaaaagg 79793
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>gb|AC105769.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1301_G07,
             complete sequence
          Length = 106166

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                         
Query: 277   aacattgttttggcgactactcagaatggtggccatcttgcattttttcaaggactaact 336
             |||||||||||||| ||| | |  || |||||||||||||| ||||||||||| ||||||
Sbjct: 43803 aacattgttttggcaactgcacctaacggtggccatcttgccttttttcaagggctaact 43744

                     
Query: 337   gctggaaa 344
             ||||||||
Sbjct: 43743 gctggaaa 43736



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 96/117 (82%)
 Strand = Plus / Minus

                                                                         
Query: 150   ctaccgccggtgcagcagcgctagttttgttggtaatgtgtcagttcccttgctttgtgt 209
             |||||| ||||||||||| || | ||   || ||||||||||||| ||| |||||||| |
Sbjct: 44009 ctaccgtcggtgcagcagtgcaaattacattagtaatgtgtcagtgcccctgctttgtat 43950

                                                                      
Query: 210   aaatgctttggatgaccccgtttgcacaagagaggcaattccttgggatgaatgcag 266
              | |||| | ||||||||  |||||||||| ||||| ||||| ||||| ||||||||
Sbjct: 43949 cagtgctcttgatgacccactttgcacaagggaggccattccctgggacgaatgcag 43893



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                         
Query: 350   ggtgggttggagctgtgtctgagttcctctgtgctctgcatgacagctcgtacatgcatc 409
             ||||||| |||||||| |||||||| ||   |||||| ||||| ||| | | ||||||||
Sbjct: 43348 ggtgggtgggagctgtttctgagtttctacttgctctacatgatagcccctgcatgcatc 43289

                      
Query: 410   ggcaaaagg 418
             |||||||||
Sbjct: 43288 ggcaaaagg 43280
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                            
Query: 277      aacattgttttggcgactactcagaatggtggccatcttgcattttttcaaggactaact 336
                |||||||||||||| ||| | |  || |||||||||||||| ||||||||||| ||||||
Sbjct: 21064938 aacattgttttggcaactgcacctaacggtggccatcttgccttttttcaagggctaact 21064879

                        
Query: 337      gctggaaa 344
                ||||||||
Sbjct: 21064878 gctggaaa 21064871



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 96/117 (82%)
 Strand = Plus / Minus

                                                                            
Query: 150      ctaccgccggtgcagcagcgctagttttgttggtaatgtgtcagttcccttgctttgtgt 209
                |||||| ||||||||||| || | ||   || ||||||||||||| ||| |||||||| |
Sbjct: 21065144 ctaccgtcggtgcagcagtgcaaattacattagtaatgtgtcagtgcccctgctttgtat 21065085

                                                                         
Query: 210      aaatgctttggatgaccccgtttgcacaagagaggcaattccttgggatgaatgcag 266
                 | |||| | ||||||||  |||||||||| ||||| ||||| ||||| ||||||||
Sbjct: 21065084 cagtgctcttgatgacccactttgcacaagggaggccattccctgggacgaatgcag 21065028



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                            
Query: 350      ggtgggttggagctgtgtctgagttcctctgtgctctgcatgacagctcgtacatgcatc 409
                ||||||| |||||||| |||||||| ||   |||||| ||||| ||| | | ||||||||
Sbjct: 21064483 ggtgggtgggagctgtttctgagtttctacttgctctacatgatagcccctgcatgcatc 21064424

                         
Query: 410      ggcaaaagg 418
                |||||||||
Sbjct: 21064423 ggcaaaagg 21064415
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>ref|NM_124374.3| Arabidopsis thaliana catalytic AT5G49950 mRNA, complete cds
          Length = 2333

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                               
Query: 213  tgctttggatgaccccgtttgcacaagagaggcaattccttgggatgaatg 263
            |||||||||||| || ||||| || ||||| || |||||||||||||||||
Sbjct: 1117 tgctttggatgatccagtttgtactagagaagctattccttgggatgaatg 1167
to top
>gb|AY081700.1| Arabidopsis thaliana unknown protein (At5g49950) mRNA, complete cds
          Length = 1466

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                               
Query: 213  tgctttggatgaccccgtttgcacaagagaggcaattccttgggatgaatg 263
            |||||||||||| || ||||| || ||||| || |||||||||||||||||
Sbjct: 1053 tgctttggatgatccagtttgtactagagaagctattccttgggatgaatg 1103
to top
>gb|AF370514.1|AF370514 Arabidopsis thaliana Unknown protein (K9P8.9) mRNA, complete cds
          Length = 1808

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                               
Query: 213  tgctttggatgaccccgtttgcacaagagaggcaattccttgggatgaatg 263
            |||||||||||| || ||||| || ||||| || |||||||||||||||||
Sbjct: 1112 tgctttggatgatccagtttgtactagagaagctattccttgggatgaatg 1162
to top
>emb|BX831526.1|CNS09YVA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH12ZE01 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1780

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                               
Query: 213  tgctttggatgaccccgtttgcacaagagaggcaattccttgggatgaatg 263
            |||||||||||| || ||||| || ||||| || |||||||||||||||||
Sbjct: 1117 tgctttggatgatccagtttgtactagagaagctattccttgggatgaatg 1167
to top
>dbj|AB024032.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9P8
          Length = 70670

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                
Query: 213   tgctttggatgaccccgtttgcacaagagaggcaattccttgggatgaatg 263
             |||||||||||| || ||||| || ||||| || |||||||||||||||||
Sbjct: 51158 tgctttggatgatccagtttgtactagagaagctattccttgggatgaatg 51108
to top
>emb|BX834057.1|CNS0A0K4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL92ZF09 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 853

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                            
Query: 215 ctttggatgaccccgtttgcacaagagaggcaattccttgggatgaatg 263
           |||||||||| || ||||| || ||||| || |||||||||||||||||
Sbjct: 209 ctttggatgatccagtttgtactagagaagctattccttgggatgaatg 257
to top
>emb|BX831112.1|CNS0A0PV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS59ZE06 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1672

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 46/52 (88%), Gaps = 1/52 (1%)
 Strand = Plus / Plus

                                                                
Query: 213  tgctttggatgaccccgtttgcacaagagaggcaatt-ccttgggatgaatg 263
            ||||||||||||||| ||||| || ||||| || ||| ||||||||||||||
Sbjct: 1029 tgctttggatgacccagtttgtactagagaagctattcccttgggatgaatg 1080
to top
>ref|XM_749523.1| Aspergillus fumigatus Af293 hypothetical protein (Afu3g10040)
           partial mRNA
          Length = 1428

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 27  gctgcatcaacctatcttggc 47
           |||||||||||||||||||||
Sbjct: 388 gctgcatcaacctatcttggc 368
to top
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 533     gccagatcaccgatgatctga 553
               |||||||||||||||||||||
Sbjct: 4628967 gccagatcaccgatgatctga 4628987
to top
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 533     gccagatcaccgatgatctga 553
               |||||||||||||||||||||
Sbjct: 4635624 gccagatcaccgatgatctga 4635644
to top
>gb|U14003.1|ECOUW93 Escherichia coli K-12 chromosomal region from 92.8 to 00.1 minutes
          Length = 338534

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 533    gccagatcaccgatgatctga 553
              |||||||||||||||||||||
Sbjct: 321777 gccagatcaccgatgatctga 321797
to top
>dbj|AP006652.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT30M07, TM0331c,
            complete sequence
          Length = 56699

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 301  aatggtggccatcttgcattttttc 325
            |||||||||||||||| ||||||||
Sbjct: 3234 aatggtggccatcttgaattttttc 3258
to top
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome
          Length = 4369232

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 533     gccagatcaccgatgatctga 553
               |||||||||||||||||||||
Sbjct: 4358629 gccagatcaccgatgatctga 4358649
to top
>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 533     gccagatcaccgatgatctga 553
               |||||||||||||||||||||
Sbjct: 4509168 gccagatcaccgatgatctga 4509188
to top
>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 533     gccagatcaccgatgatctga 553
               |||||||||||||||||||||
Sbjct: 4814610 gccagatcaccgatgatctga 4814630
to top
>gb|M69185.1|ECOSLTY Escherichia coli soluble lytic transglycogenase (slt) gene,
           complete cds
          Length = 2548

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 533 gccagatcaccgatgatctga 553
           |||||||||||||||||||||
Sbjct: 661 gccagatcaccgatgatctga 681
to top
>gb|AC162528.5| Mus musculus BAC clone RP23-4P1 from chromosome 5, complete sequence
          Length = 219218

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 589    gaacaagccaaggaagtgga 608
              ||||||||||||||||||||
Sbjct: 127268 gaacaagccaaggaagtgga 127287
to top
>gb|AC151577.2| Mus musculus BAC clone RP23-371D23 from chromosome 5, complete sequence
          Length = 206735

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 589    gaacaagccaaggaagtgga 608
              ||||||||||||||||||||
Sbjct: 146191 gaacaagccaaggaagtgga 146172
to top
>gb|BT018421.1| Zea mays clone EL01N0360A04.d mRNA sequence
          Length = 1896

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 580  caagaagatgaacaagccaa 599
            ||||||||||||||||||||
Sbjct: 1378 caagaagatgaacaagccaa 1397
to top
>gb|AY246561.1| Branchiostoma floridae cosmid MPMGc117J2370Q6, partial sequence
          Length = 29546

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 572   acagcacacaagaagatgaa 591
             ||||||||||||||||||||
Sbjct: 13123 acagcacacaagaagatgaa 13142
to top
>gb|AC132089.3| Mus musculus BAC clone RP24-426D18 from chromosome 1, complete sequence
          Length = 171608

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 429   tgttctacattcttcactggagtc 452
             |||||||| |||||||||||||||
Sbjct: 38494 tgttctaccttcttcactggagtc 38471
to top
>gb|AC098882.3| Mus musculus BAC clone RP23-122D13 from 12, complete sequence
          Length = 223130

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 568    ataaacagcacacaagaagatgaacaag 595
              |||||||||||||| ||||||| |||||
Sbjct: 171101 ataaacagcacacaggaagatgtacaag 171074
to top
>emb|Z26590.1|MV4LYSAB Bacteriophage mv4 lysA and lysB genes
          Length = 2796

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 582  agaagatgaacaagccaagg 601
            ||||||||||||||||||||
Sbjct: 2361 agaagatgaacaagccaagg 2380
to top
>emb|AL672236.18| Mouse DNA sequence from clone RP23-206L21 on chromosome 11 Contains a
              ribosomal protein S6 (Rps6) pseudogene, a novel gene, the
              gene for a novel immunoglobulin domain containing protein
              and two CpG islands, complete sequence
          Length = 219893

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 351    gtgggttggagctgtgtctg 370
              ||||||||||||||||||||
Sbjct: 215782 gtgggttggagctgtgtctg 215763
to top
>gb|AC159211.2| Mus musculus BAC clone RP23-33F21 from chromosome 12, complete sequence
          Length = 201550

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 568   ataaacagcacacaagaagatgaacaag 595
             |||||||||||||| ||||||| |||||
Sbjct: 12537 ataaacagcacacaggaagatgtacaag 12564
to top
>gb|AC023687.3| Drosophila melanogaster X BAC RP98-36C7 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 185848

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 162    cagcagcgctagttttgttggtaa 185
              ||||| ||||||||||||||||||
Sbjct: 173925 cagcatcgctagttttgttggtaa 173902
to top
>gb|AC007071.7| Arabidopsis thaliana chromosome 2 clone T9H9 map nga361, complete
            sequence
          Length = 79734

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 174  ttttgttggtaatgtgtcagttcc 197
            ||||||||||||||||||| ||||
Sbjct: 7573 ttttgttggtaatgtgtcaattcc 7550
to top
>gb|AC023690.3| Drosophila melanogaster X BAC RP98-6M20 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 176233

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 162    cagcagcgctagttttgttggtaa 185
              ||||| ||||||||||||||||||
Sbjct: 134779 cagcatcgctagttttgttggtaa 134802
to top
>emb|CR385036.3| Human DNA sequence from clone WI2-2890K7 on chromosome 9, complete
             sequence
          Length = 26133

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 196   cccttgctttgtgtaaatgc 215
             ||||||||||||||||||||
Sbjct: 21200 cccttgctttgtgtaaatgc 21181
to top
>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I,
              complete sequence
          Length = 691920

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 403    atgcatcggcaaaaggcgga 422
              ||||||||||||||||||||
Sbjct: 637417 atgcatcggcaaaaggcgga 637398
to top
>ref|NM_208058.1| Eremothecium gossypii AAR162Cp (AAR162C), mRNA
          Length = 3516

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 403 atgcatcggcaaaaggcgga 422
           ||||||||||||||||||||
Sbjct: 166 atgcatcggcaaaaggcgga 185
to top
>gb|AE003488.3| Drosophila melanogaster chromosome X, section 40 of 74 of the complete
              sequence
          Length = 315134

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 162    cagcagcgctagttttgttggtaa 185
              ||||| ||||||||||||||||||
Sbjct: 176213 cagcatcgctagttttgttggtaa 176236
to top
>emb|AL591417.9| Mouse DNA sequence from clone RP23-272C1 on chromosome 11, complete
             sequence
          Length = 131385

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 369   tgagttcctctgtgctctgc 388
             ||||||||||||||||||||
Sbjct: 67772 tgagttcctctgtgctctgc 67791
to top
>emb|AJ510210.1|ATH510210 Arabidopsis thaliana ari7 gene for ARIADNE-like protein ARI7, exons
            1-15
          Length = 4180

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 174  ttttgttggtaatgtgtcagttcc 197
            ||||||||||||||||||| ||||
Sbjct: 2342 ttttgttggtaatgtgtcaattcc 2365
to top
>gb|AC140337.3| Mus musculus BAC clone RP23-238H7 from 1, complete sequence
          Length = 229594

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 429   tgttctacattcttcactggagtc 452
             |||||||| |||||||||||||||
Sbjct: 24936 tgttctaccttcttcactggagtc 24959
to top
>emb|AL662887.13| Mouse DNA sequence from clone RP23-400P17 on chromosome 11, complete
              sequence
          Length = 198011

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 178    gttggtaatgtgtcagttcc 197
              ||||||||||||||||||||
Sbjct: 165868 gttggtaatgtgtcagttcc 165849


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,306,561
Number of Sequences: 3902068
Number of extensions: 5306561
Number of successful extensions: 90595
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 90342
Number of HSP's gapped (non-prelim): 250
length of query: 614
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 591
effective length of database: 17,143,297,704
effective search space: 10131688943064
effective search space used: 10131688943064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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