ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags29f03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 482 e-133
2dbj|AP005300.3| Oryza sativa (japonica cultivar-group) genomic D... 482 e-133
3dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic D... 482 e-133
4ref|XM_466702.1| Oryza sativa (japonica cultivar-group), mRNA 88 4e-14
5dbj|AK108796.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
6gb|BT018128.1| Zea mays clone EL01N0554D03.c mRNA sequence 66 2e-07
7gb|AC131998.9| Mus musculus chromosome 1, clone RP24-164G9, comp... 44 0.56
8gb|AC154872.10| Mus musculus chromosome 1, clone RP23-393C3, com... 44 0.56
9gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence 42 2.2
10gb|AC104642.11| Trypanosoma brucei chromosome 3 clone RPCI93-27C... 42 2.2
11gb|AC159446.1| Trypanosoma brucei chromosome 3 clone RPCI93-3K10... 42 2.2
12gb|AC146391.4| Pan troglodytes BAC clone RP43-56L16 from 7, comp... 42 2.2
13ref|XM_820546.1| Trypanosoma brucei TREU927 clone RPCI93-27C5 hy... 42 2.2
14gb|AC011310.3|AC011310 Homo sapiens BAC clone CTD-2590C17 from 7... 42 2.2
15gb|AC018641.3|AC018641 Human Chromosome 7 clone RP11-182G3, comp... 42 2.2
16gb|AC018637.3|AC018637 Human Chromosome 7 clone RP11-175P8, comp... 42 2.2
17gb|DP000017.1| Sus scrofa target 1 genomic scaffold 40 8.8
18gb|AC161373.4| Mus musculus BAC clone RP23-308E4 from chromosome... 40 8.8
19gb|AC113720.6| Rattus norvegicus 1 BAC CH230-117B1 (Children's H... 40 8.8
20ref|XM_461349.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 8.8
21gb|AC092478.2| Sus scrofa clone RP44-360A14, complete sequence 40 8.8
22gb|AY763751.1| Parasphaerichthys lineatus cytochrome b (cytb) ge... 40 8.8
23gb|AC125112.3| Mus musculus BAC clone RP24-239I23 from chromosom... 40 8.8
24gb|AC110918.9| Mus musculus chromosome 5, clone RP23-189P23, com... 40 8.8
25emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS... 40 8.8
26gb|AC159196.2| Mus musculus BAC clone RP23-430O17 from chromosom... 40 8.8
27emb|AJ429087.1|PMI429087 Pepper mild mottle virus cp gene for ca... 40 8.8
28gb|AC154324.2| Mus musculus BAC clone RP24-494E12 from chromosom... 40 8.8
29dbj|AB113117.1| Pepper mild mottle virus gene for 126k protein, ... 40 8.8
30dbj|AB113116.1| Pepper mild mottle virus gene for 126k protein, ... 40 8.8
31emb|AJ606433.1| Marmosops pinheiroi mitochondrial partial cyt-b ... 40 8.8
32emb|AJ606432.1| Marmosops pinheiroi mitochondrial partial cyt-b ... 40 8.8
33emb|AJ606431.1| Marmosops pinheiroi mitochondrial partial cyt-b ... 40 8.8
34emb|AJ606430.1| Marmosops pinheiroi mitochondrial partial cyt-b ... 40 8.8
35gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 8.8
36gb|AY828977.1| Lepomis megalotis voucher SIUC 37913 cytochrome b... 40 8.8
37gb|AY828976.1| Lepomis megalotis voucher SIUC 3707 cytochrome b ... 40 8.8
38gb|AY926395.1| Chaetodipus pernix isolate LVT 1267 cytochrome b ... 40 8.8
39gb|AY009251.1| Chaetodipus pernix cytochrome b (Cytb) gene, part... 40 8.8
40gb|AC005180.3| Homo sapiens chromosome 17, clone CTC-296K1, comp... 40 8.8
41gb|M87827.1|PMVCPG Pepper mild mottle virus coat protein gene se... 40 8.8
42ref|NM_210976.1| Eremothecium gossypii AFR075Cp (AFR075C), mRNA 40 8.8
43emb|CR735107.13| Zebrafish DNA sequence from clone CH211-127B16 ... 40 8.8
44emb|CT030655.7| Mouse DNA sequence from clone RP23-259C9 on chro... 40 8.8
45emb|BX544878.7| Mouse DNA sequence from clone RP23-203A24 on chr... 40 8.8
46dbj|AB000709.2| Pepper mild mottle virus mRNA for 126 kDa protei... 40 8.8
47gb|M81413.1|PPPSLF Nucleotide sequence of the genomic RNA of the... 40 8.8
48gb|AY859497.1| Pepper mild mottle virus isolate PMMoV-CN, comple... 40 8.8
49dbj|AB069853.1| Pepper mild mottle virus gene for 126 kDa protei... 40 8.8 
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  482 bits (243), Expect = e-133
 Identities = 476/554 (85%), Gaps = 6/554 (1%)
 Strand = Plus / Minus

                                                                            
Query: 7        tggtgttggaaagaaggcattctcacaagttaagttcaaagtctggggctg------tcg 60
                ||||||||||||||||||||||||||| |||||||   ||||||||| |||      | |
Sbjct: 24201197 tggtgttggaaagaaggcattctcacaggttaagtcttaagtctgggactgggactatgg 24201138

                                                                            
Query: 61       tgtatgatttgcagagcaaacaagttctattagatgggcagtttgaaccctcgcccatcc 120
                || ||||||  |||| ||| |||||||| ||||| |||||||||||||  | |||  |||
Sbjct: 24201137 tgaatgattcacagaacaagcaagttctgttagacgggcagtttgaacatttgcctgtcc 24201078

                                                                            
Query: 121      aagaaggtgaattcacctcagtccttgcacttggtgaggtattgtctctatctacctcag 180
                |||||| ||| ||||| |||||||||||||||||||||||||| |||||||||||   | 
Sbjct: 24201077 aagaagatgatttcacttcagtccttgcacttggtgaggtattatctctatctacagaaa 24201018

                                                                            
Query: 181      cgagggtccaagacttcgtgcggatgctttatgccatcatgtttaagatctatgccgagg 240
                | ||||| ||||| || ||||||||||||||||| ||||| |||||||| ||| ||||||
Sbjct: 24201017 ccagggtgcaagattttgtgcggatgctttatgctatcatttttaagatatataccgagg 24200958

                                                                            
Query: 241      atcattatagatgcagatttctgaagggcctcgttgaccgggcaacaaatacctcagata 300
                ||||||||||||  ||| |||||||||| || ||||| || ||||||||||| |||||||
Sbjct: 24200957 atcattatagatatagaattctgaagggtcttgttgaacgagcaacaaatacttcagata 24200898

                                                                            
Query: 301      actgccgagaagttgacatagatatggatgtcttggtatttcttgttaaggaggagtttg 360
                 |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 24200897 gctgccgagcagttgacatagatatggatgtcttggtatttcttgttaaggaggaatttg 24200838

                                                                            
Query: 361      gaattgctagacctgtgttaaacatgatgcgggaagctgctgaagttgctcaggccgatc 420
                |||||||||||||||| || |||||| |||| || | ||||||||||||||| || ||||
Sbjct: 24200837 gaattgctagacctgttttgaacatgttgcgtgaggttgctgaagttgctcaagctgatc 24200778

                                                                            
Query: 421      gtgctaatctttggcaccaaatatgtgctactgaggatgagaatattcgtttgcgggagg 480
                |||| ||||||||||||||||||||||||||||| ||||||||||| |||||||| || |
Sbjct: 24200777 gtgcaaatctttggcaccaaatatgtgctactgaagatgagaatatgcgtttgcgagaag 24200718

                                                                            
Query: 481      agatggacatggatcaaactaaatttaccaatgaaaaagctgtattagcccaacgactaa 540
                | ||||| ||||| ||||| ||||| || || ||||||| ||| |||   |||| |||||
Sbjct: 24200717 acatggatatggaacaaacaaaattcactaaggaaaaagatgtgttaatgcaacaactaa 24200658

                              
Query: 541      ctgagtctgaggca 554
                ||||||| ||||||
Sbjct: 24200657 ctgagtcagaggca 24200644



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                   
Query: 572      gtctgaactaaaagctgagaaggatcgtcatattcgggagaagaaggaact 622
                |||||| |||||||||||||||||||||  | | |||||||||||||||||
Sbjct: 24200538 gtctgagctaaaagctgagaaggatcgttttgtccgggagaagaaggaact 24200488
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>dbj|AP005300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ2055_H10
          Length = 119290

 Score =  482 bits (243), Expect = e-133
 Identities = 476/554 (85%), Gaps = 6/554 (1%)
 Strand = Plus / Minus

                                                                        
Query: 7    tggtgttggaaagaaggcattctcacaagttaagttcaaagtctggggctg------tcg 60
            ||||||||||||||||||||||||||| |||||||   ||||||||| |||      | |
Sbjct: 1585 tggtgttggaaagaaggcattctcacaggttaagtcttaagtctgggactgggactatgg 1526

                                                                        
Query: 61   tgtatgatttgcagagcaaacaagttctattagatgggcagtttgaaccctcgcccatcc 120
            || ||||||  |||| ||| |||||||| ||||| |||||||||||||  | |||  |||
Sbjct: 1525 tgaatgattcacagaacaagcaagttctgttagacgggcagtttgaacatttgcctgtcc 1466

                                                                        
Query: 121  aagaaggtgaattcacctcagtccttgcacttggtgaggtattgtctctatctacctcag 180
            |||||| ||| ||||| |||||||||||||||||||||||||| |||||||||||   | 
Sbjct: 1465 aagaagatgatttcacttcagtccttgcacttggtgaggtattatctctatctacagaaa 1406

                                                                        
Query: 181  cgagggtccaagacttcgtgcggatgctttatgccatcatgtttaagatctatgccgagg 240
            | ||||| ||||| || ||||||||||||||||| ||||| |||||||| ||| ||||||
Sbjct: 1405 ccagggtgcaagattttgtgcggatgctttatgctatcatttttaagatatataccgagg 1346

                                                                        
Query: 241  atcattatagatgcagatttctgaagggcctcgttgaccgggcaacaaatacctcagata 300
            ||||||||||||  ||| |||||||||| || ||||| || ||||||||||| |||||||
Sbjct: 1345 atcattatagatatagaattctgaagggtcttgttgaacgagcaacaaatacttcagata 1286

                                                                        
Query: 301  actgccgagaagttgacatagatatggatgtcttggtatttcttgttaaggaggagtttg 360
             |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1285 gctgccgagcagttgacatagatatggatgtcttggtatttcttgttaaggaggaatttg 1226

                                                                        
Query: 361  gaattgctagacctgtgttaaacatgatgcgggaagctgctgaagttgctcaggccgatc 420
            |||||||||||||||| || |||||| |||| || | ||||||||||||||| || ||||
Sbjct: 1225 gaattgctagacctgttttgaacatgttgcgtgaggttgctgaagttgctcaagctgatc 1166

                                                                        
Query: 421  gtgctaatctttggcaccaaatatgtgctactgaggatgagaatattcgtttgcgggagg 480
            |||| ||||||||||||||||||||||||||||| ||||||||||| |||||||| || |
Sbjct: 1165 gtgcaaatctttggcaccaaatatgtgctactgaagatgagaatatgcgtttgcgagaag 1106

                                                                        
Query: 481  agatggacatggatcaaactaaatttaccaatgaaaaagctgtattagcccaacgactaa 540
            | ||||| ||||| ||||| ||||| || || ||||||| ||| |||   |||| |||||
Sbjct: 1105 acatggatatggaacaaacaaaattcactaaggaaaaagatgtgttaatgcaacaactaa 1046

                          
Query: 541  ctgagtctgaggca 554
            ||||||| ||||||
Sbjct: 1045 ctgagtcagaggca 1032



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                              
Query: 572 gtctgaactaaaagctgagaaggatcgtcatattcgggagaagaaggaact 622
           |||||| |||||||||||||||||||||  | | |||||||||||||||||
Sbjct: 926 gtctgagctaaaagctgagaaggatcgttttgtccgggagaagaaggaact 876
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>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1004_A05
          Length = 174290

 Score =  482 bits (243), Expect = e-133
 Identities = 476/554 (85%), Gaps = 6/554 (1%)
 Strand = Plus / Minus

                                                                          
Query: 7      tggtgttggaaagaaggcattctcacaagttaagttcaaagtctggggctg------tcg 60
              ||||||||||||||||||||||||||| |||||||   ||||||||| |||      | |
Sbjct: 159938 tggtgttggaaagaaggcattctcacaggttaagtcttaagtctgggactgggactatgg 159879

                                                                          
Query: 61     tgtatgatttgcagagcaaacaagttctattagatgggcagtttgaaccctcgcccatcc 120
              || ||||||  |||| ||| |||||||| ||||| |||||||||||||  | |||  |||
Sbjct: 159878 tgaatgattcacagaacaagcaagttctgttagacgggcagtttgaacatttgcctgtcc 159819

                                                                          
Query: 121    aagaaggtgaattcacctcagtccttgcacttggtgaggtattgtctctatctacctcag 180
              |||||| ||| ||||| |||||||||||||||||||||||||| |||||||||||   | 
Sbjct: 159818 aagaagatgatttcacttcagtccttgcacttggtgaggtattatctctatctacagaaa 159759

                                                                          
Query: 181    cgagggtccaagacttcgtgcggatgctttatgccatcatgtttaagatctatgccgagg 240
              | ||||| ||||| || ||||||||||||||||| ||||| |||||||| ||| ||||||
Sbjct: 159758 ccagggtgcaagattttgtgcggatgctttatgctatcatttttaagatatataccgagg 159699

                                                                          
Query: 241    atcattatagatgcagatttctgaagggcctcgttgaccgggcaacaaatacctcagata 300
              ||||||||||||  ||| |||||||||| || ||||| || ||||||||||| |||||||
Sbjct: 159698 atcattatagatatagaattctgaagggtcttgttgaacgagcaacaaatacttcagata 159639

                                                                          
Query: 301    actgccgagaagttgacatagatatggatgtcttggtatttcttgttaaggaggagtttg 360
               |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 159638 gctgccgagcagttgacatagatatggatgtcttggtatttcttgttaaggaggaatttg 159579

                                                                          
Query: 361    gaattgctagacctgtgttaaacatgatgcgggaagctgctgaagttgctcaggccgatc 420
              |||||||||||||||| || |||||| |||| || | ||||||||||||||| || ||||
Sbjct: 159578 gaattgctagacctgttttgaacatgttgcgtgaggttgctgaagttgctcaagctgatc 159519

                                                                          
Query: 421    gtgctaatctttggcaccaaatatgtgctactgaggatgagaatattcgtttgcgggagg 480
              |||| ||||||||||||||||||||||||||||| ||||||||||| |||||||| || |
Sbjct: 159518 gtgcaaatctttggcaccaaatatgtgctactgaagatgagaatatgcgtttgcgagaag 159459

                                                                          
Query: 481    agatggacatggatcaaactaaatttaccaatgaaaaagctgtattagcccaacgactaa 540
              | ||||| ||||| ||||| ||||| || || ||||||| ||| |||   |||| |||||
Sbjct: 159458 acatggatatggaacaaacaaaattcactaaggaaaaagatgtgttaatgcaacaactaa 159399

                            
Query: 541    ctgagtctgaggca 554
              ||||||| ||||||
Sbjct: 159398 ctgagtcagaggca 159385



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                 
Query: 572    gtctgaactaaaagctgagaaggatcgtcatattcgggagaagaaggaact 622
              |||||| |||||||||||||||||||||  | | |||||||||||||||||
Sbjct: 159279 gtctgagctaaaagctgagaaggatcgttttgtccgggagaagaaggaact 159229
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>ref|XM_466702.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1190

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 80/92 (86%)
 Strand = Plus / Plus

                                                                       
Query: 531 caacgactaactgagtctgaggcaactacaggacatctaaggtctgaactaaaagctgag 590
           |||| |||||||||||| |||||| |||  |  |||||||||||||| ||||||||||||
Sbjct: 22  caacaactaactgagtcagaggcagctaatgcgcatctaaggtctgagctaaaagctgag 81

                                           
Query: 591 aaggatcgtcatattcgggagaagaaggaact 622
           |||||||||  | | |||||||||||||||||
Sbjct: 82  aaggatcgttttgtccgggagaagaaggaact 113
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>dbj|AK108796.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-C01, full
           insert sequence
          Length = 1190

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 80/92 (86%)
 Strand = Plus / Plus

                                                                       
Query: 531 caacgactaactgagtctgaggcaactacaggacatctaaggtctgaactaaaagctgag 590
           |||| |||||||||||| |||||| |||  |  |||||||||||||| ||||||||||||
Sbjct: 22  caacaactaactgagtcagaggcagctaatgcgcatctaaggtctgagctaaaagctgag 81

                                           
Query: 591 aaggatcgtcatattcgggagaagaaggaact 622
           |||||||||  | | |||||||||||||||||
Sbjct: 82  aaggatcgttttgtccgggagaagaaggaact 113
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>gb|BT018128.1| Zea mays clone EL01N0554D03.c mRNA sequence
          Length = 1385

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 530 ccaacgactaactgagtctgaggcaactacaggacatctaaggtctgaactaaaagctga 589
           |||||| ||||||||||  ||||||||||  ||   |||||||||||| |||||||||||
Sbjct: 14  ccaacggctaactgagttggaggcaactattggcattctaaggtctgagctaaaagctga 73

                                        
Query: 590 gaaggatcgtcatattcgggagaagaagg 618
           || |||||||  || ||| ||||||||||
Sbjct: 74  gagggatcgttttactcgtgagaagaagg 102
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>gb|AC131998.9| Mus musculus chromosome 1, clone RP24-164G9, complete sequence
          Length = 152462

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 611    gaagaaggaactctccaggcag 632
              ||||||||||||||||||||||
Sbjct: 131188 gaagaaggaactctccaggcag 131167
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>gb|AC154872.10| Mus musculus chromosome 1, clone RP23-393C3, complete sequence
          Length = 193086

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 611   gaagaaggaactctccaggcag 632
             ||||||||||||||||||||||
Sbjct: 22237 gaagaaggaactctccaggcag 22216
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>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence
          Length = 1653225

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 474    cgggaggagatggacatggat 494
              |||||||||||||||||||||
Sbjct: 798565 cgggaggagatggacatggat 798545
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>gb|AC104642.11| Trypanosoma brucei chromosome 3 clone RPCI93-27C5, complete sequence
          Length = 126762

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 474    cgggaggagatggacatggat 494
              |||||||||||||||||||||
Sbjct: 107513 cgggaggagatggacatggat 107493
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>gb|AC159446.1| Trypanosoma brucei chromosome 3 clone RPCI93-3K10, complete sequence
          Length = 91751

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 474  cgggaggagatggacatggat 494
            |||||||||||||||||||||
Sbjct: 5011 cgggaggagatggacatggat 4991
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>gb|AC146391.4| Pan troglodytes BAC clone RP43-56L16 from 7, complete sequence
          Length = 155929

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 523    tattagcccaacgactaactg 543
              |||||||||||||||||||||
Sbjct: 129948 tattagcccaacgactaactg 129968
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>ref|XM_820546.1| Trypanosoma brucei TREU927 clone RPCI93-27C5 hypothetical protein
            (Tb927.3.3110) partial mRNA
          Length = 3186

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 474  cgggaggagatggacatggat 494
            |||||||||||||||||||||
Sbjct: 1597 cgggaggagatggacatggat 1617
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>gb|AC011310.3|AC011310 Homo sapiens BAC clone CTD-2590C17 from 7p11.2-p21, complete sequence
          Length = 142834

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 523    tattagcccaacgactaactg 543
              |||||||||||||||||||||
Sbjct: 117090 tattagcccaacgactaactg 117110
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>gb|AC018641.3|AC018641 Human Chromosome 7 clone RP11-182G3, complete sequence
          Length = 183060

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 523    tattagcccaacgactaactg 543
              |||||||||||||||||||||
Sbjct: 139087 tattagcccaacgactaactg 139067
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>gb|AC018637.3|AC018637 Human Chromosome 7 clone RP11-175P8, complete sequence
          Length = 184571

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 523    tattagcccaacgactaactg 543
              |||||||||||||||||||||
Sbjct: 135182 tattagcccaacgactaactg 135202
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>gb|DP000017.1| Sus scrofa target 1 genomic scaffold
          Length = 1471440

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 496     aaactaaatttaccaatgaa 515
               ||||||||||||||||||||
Sbjct: 1175729 aaactaaatttaccaatgaa 1175710
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>gb|AC161373.4| Mus musculus BAC clone RP23-308E4 from chromosome 6, complete sequence
          Length = 189028

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 106    aaccctcgcccatccaagaaggtg 129
              |||||| |||||||||||||||||
Sbjct: 104718 aaccctagcccatccaagaaggtg 104695
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>gb|AC113720.6| Rattus norvegicus 1 BAC CH230-117B1 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 249629

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 605   tcgggagaagaaggaactct 624
             ||||||||||||||||||||
Sbjct: 73381 tcgggagaagaaggaactct 73400
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>ref|XM_461349.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F24618g)
            partial mRNA
          Length = 4851

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 117  atccaagaaggtgaattcac 136
            ||||||||||||||||||||
Sbjct: 4438 atccaagaaggtgaattcac 4457
to top
>gb|AC092478.2| Sus scrofa clone RP44-360A14, complete sequence
          Length = 161008

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 496   aaactaaatttaccaatgaa 515
             ||||||||||||||||||||
Sbjct: 37293 aaactaaatttaccaatgaa 37274
to top
>gb|AY763751.1| Parasphaerichthys lineatus cytochrome b (cytb) gene, complete cds;
           and tRNA-Thr gene, partial sequence; mitochondrial
          Length = 1170

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 438 caaatatgtgctactgagga 457
           ||||||||||||||||||||
Sbjct: 209 caaatatgtgctactgagga 190
to top
>gb|AC125112.3| Mus musculus BAC clone RP24-239I23 from chromosome 2, complete sequence
          Length = 149339

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   gttaaggaggagtttggaat 364
             ||||||||||||||||||||
Sbjct: 12607 gttaaggaggagtttggaat 12588
to top
>gb|AC110918.9| Mus musculus chromosome 5, clone RP23-189P23, complete sequence
          Length = 267946

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 550    aggcaactacaggacatctaaggt 573
              ||||||| ||||||||||||||||
Sbjct: 202013 aggcaacaacaggacatctaaggt 202036
to top
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces
               hansenii
          Length = 2336804

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 117     atccaagaaggtgaattcac 136
               ||||||||||||||||||||
Sbjct: 1952364 atccaagaaggtgaattcac 1952345
to top
>gb|AC159196.2| Mus musculus BAC clone RP23-430O17 from chromosome 13, complete sequence
          Length = 198595

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 64     atgatttgcagagcaaacaa 83
              ||||||||||||||||||||
Sbjct: 101088 atgatttgcagagcaaacaa 101107
to top
>emb|AJ429087.1|PMI429087 Pepper mild mottle virus cp gene for capsid protein, genomic RNA,
           isolate DSMZ PV-16
          Length = 712

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 208 tttatgccatcatgtttaag 227
           ||||||||||||||||||||
Sbjct: 690 tttatgccatcatgtttaag 671
to top
>gb|AC154324.2| Mus musculus BAC clone RP24-494E12 from chromosome 14, complete
             sequence
          Length = 198197

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 493   atcaaactaaatttaccaatgaaaaagctgta 524
             ||||| |||| ||||||||||||||| |||||
Sbjct: 79764 atcaatctaattttaccaatgaaaaatctgta 79795
to top
>dbj|AB113117.1| Pepper mild mottle virus gene for 126k protein, complete cds, strain:
            TPO-2-19
          Length = 6356

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 208  tttatgccatcatgtttaag 227
            ||||||||||||||||||||
Sbjct: 6173 tttatgccatcatgtttaag 6154
to top
>dbj|AB113116.1| Pepper mild mottle virus gene for 126k protein, complete cds, strain:
            Pa18
          Length = 6356

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 208  tttatgccatcatgtttaag 227
            ||||||||||||||||||||
Sbjct: 6173 tttatgccatcatgtttaag 6154
to top
>emb|AJ606433.1| Marmosops pinheiroi mitochondrial partial cyt-b gene for cytochrome
           b, tissue library ROM F-44687
          Length = 800

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 438 caaatatgtgctactgagga 457
           ||||||||||||||||||||
Sbjct: 209 caaatatgtgctactgagga 190
to top
>emb|AJ606432.1| Marmosops pinheiroi mitochondrial partial cyt-b gene for cytochrome
           b, tissue library ROM F-41348
          Length = 800

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 438 caaatatgtgctactgagga 457
           ||||||||||||||||||||
Sbjct: 209 caaatatgtgctactgagga 190
to top
>emb|AJ606431.1| Marmosops pinheiroi mitochondrial partial cyt-b gene for cytochrome
           b, tissue library ROM F-43900
          Length = 800

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 438 caaatatgtgctactgagga 457
           ||||||||||||||||||||
Sbjct: 209 caaatatgtgctactgagga 190
to top
>emb|AJ606430.1| Marmosops pinheiroi mitochondrial partial cyt-b gene for cytochrome
           b, tissue library ISEM V-955
          Length = 800

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 438 caaatatgtgctactgagga 457
           ||||||||||||||||||||
Sbjct: 209 caaatatgtgctactgagga 190
to top
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI,
              complete sequence
          Length = 1813164

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 197    cgtgcggatgctttatgccatcat 220
              |||||||||| |||||||||||||
Sbjct: 562143 cgtgcggatgttttatgccatcat 562120
to top
>gb|AY828977.1| Lepomis megalotis voucher SIUC 37913 cytochrome b (cytb) gene,
           partial cds; mitochondrial
          Length = 1140

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 438 caaatatgtgctactgagga 457
           ||||||||||||||||||||
Sbjct: 209 caaatatgtgctactgagga 190
to top
>gb|AY828976.1| Lepomis megalotis voucher SIUC 3707 cytochrome b (cytb) gene,
           partial cds; mitochondrial
          Length = 1140

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 438 caaatatgtgctactgagga 457
           ||||||||||||||||||||
Sbjct: 209 caaatatgtgctactgagga 190
to top
>gb|AY926395.1| Chaetodipus pernix isolate LVT 1267 cytochrome b (cytb) gene,
           complete cds; mitochondrial
          Length = 1140

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 438 caaatatgtgctactgagga 457
           ||||||||||||||||||||
Sbjct: 209 caaatatgtgctactgagga 190
to top
>gb|AY009251.1| Chaetodipus pernix cytochrome b (Cytb) gene, partial cds;
           mitochondrial gene for mitochondrial product
          Length = 450

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 438 caaatatgtgctactgagga 457
           ||||||||||||||||||||
Sbjct: 209 caaatatgtgctactgagga 190
to top
>gb|AC005180.3| Homo sapiens chromosome 17, clone CTC-296K1, complete sequence
          Length = 126610

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 120   caagaaggtgaattcacctcagtc 143
             ||||||||| ||||||||||||||
Sbjct: 89897 caagaaggtcaattcacctcagtc 89920
to top
>gb|M87827.1|PMVCPG Pepper mild mottle virus coat protein gene sequence
          Length = 1009

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 208 tttatgccatcatgtttaag 227
           ||||||||||||||||||||
Sbjct: 826 tttatgccatcatgtttaag 807
to top
>ref|NM_210976.1| Eremothecium gossypii AFR075Cp (AFR075C), mRNA
          Length = 2223

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 197  cgtgcggatgctttatgccatcat 220
            |||||||||| |||||||||||||
Sbjct: 1602 cgtgcggatgttttatgccatcat 1625
to top
>emb|CR735107.13| Zebrafish DNA sequence from clone CH211-127B16 in linkage group 12,
             complete sequence
          Length = 183614

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 138   tcagtccttgcacttggtgaggtattgt 165
             |||||||| |||||||||||||| ||||
Sbjct: 38237 tcagtcctggcacttggtgaggttttgt 38210
to top
>emb|CT030655.7| Mouse DNA sequence from clone RP23-259C9 on chromosome 13, complete
             sequence
          Length = 120944

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 12460 agctgctgaagttgctcagg 12479



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 12428 agctgctgaagttgctcagg 12447



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 12396 agctgctgaagttgctcagg 12415



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 12364 agctgctgaagttgctcagg 12383



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 12332 agctgctgaagttgctcagg 12351



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 12300 agctgctgaagttgctcagg 12319



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 12268 agctgctgaagttgctcagg 12287



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 12236 agctgctgaagttgctcagg 12255



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 12204 agctgctgaagttgctcagg 12223



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 12172 agctgctgaagttgctcagg 12191



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 12140 agctgctgaagttgctcagg 12159



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 12108 agctgctgaagttgctcagg 12127



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 12076 agctgctgaagttgctcagg 12095



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 12044 agctgctgaagttgctcagg 12063



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 12012 agctgctgaagttgctcagg 12031



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 11848 agctgctgaagttgctcagg 11867



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 11816 agctgctgaagttgctcagg 11835



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 11784 agctgctgaagttgctcagg 11803



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 11752 agctgctgaagttgctcagg 11771



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 11720 agctgctgaagttgctcagg 11739



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 11688 agctgctgaagttgctcagg 11707



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 11656 agctgctgaagttgctcagg 11675



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 11624 agctgctgaagttgctcagg 11643



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 11592 agctgctgaagttgctcagg 11611



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 11560 agctgctgaagttgctcagg 11579



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 11528 agctgctgaagttgctcagg 11547



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 11496 agctgctgaagttgctcagg 11515



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 11432 agctgctgaagttgctcagg 11451



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 11400 agctgctgaagttgctcagg 11419



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 11236 agctgctgaagttgctcagg 11255



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 11171 agctgctgaagttgctcagg 11190



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 11106 agctgctgaagttgctcagg 11125



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 11074 agctgctgaagttgctcagg 11093



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 11042 agctgctgaagttgctcagg 11061



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 11010 agctgctgaagttgctcagg 11029



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 10978 agctgctgaagttgctcagg 10997



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 10880 agctgctgaagttgctcagg 10899



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 10815 agctgctgaagttgctcagg 10834



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 10783 agctgctgaagttgctcagg 10802



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 10751 agctgctgaagttgctcagg 10770



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 10719 agctgctgaagttgctcagg 10738



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 10687 agctgctgaagttgctcagg 10706



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 10655 agctgctgaagttgctcagg 10674



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 10590 agctgctgaagttgctcagg 10609



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 10558 agctgctgaagttgctcagg 10577



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 10526 agctgctgaagttgctcagg 10545



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 10494 agctgctgaagttgctcagg 10513



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   agctgctgaagttgctcagg 414
             ||||||||||||||||||||
Sbjct: 10429 agctgctgaagttgctcagg 10448
to top
>emb|BX544878.7| Mouse DNA sequence from clone RP23-203A24 on chromosome 2, complete
             sequence
          Length = 59823

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 345   gttaaggaggagtttggaat 364
             ||||||||||||||||||||
Sbjct: 47585 gttaaggaggagtttggaat 47604
to top
>dbj|AB000709.2| Pepper mild mottle virus mRNA for 126 kDa protein, 183kDa protein,
            28kDa protein, 17kDa protein, complete cds
          Length = 6357

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 208  tttatgccatcatgtttaag 227
            ||||||||||||||||||||
Sbjct: 6173 tttatgccatcatgtttaag 6154
to top
>gb|M81413.1|PPPSLF Nucleotide sequence of the genomic RNA of the tobamovirus Pepper mild
            mottlevirus, strain S (PMMV-S)
          Length = 6357

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 208  tttatgccatcatgtttaag 227
            ||||||||||||||||||||
Sbjct: 6173 tttatgccatcatgtttaag 6154
to top
>gb|AY859497.1| Pepper mild mottle virus isolate PMMoV-CN, complete genome
          Length = 6356

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 208  tttatgccatcatgtttaag 227
            ||||||||||||||||||||
Sbjct: 6173 tttatgccatcatgtttaag 6154
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>dbj|AB069853.1| Pepper mild mottle virus gene for 126 kDa protein, complete cds
          Length = 6357

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 208  tttatgccatcatgtttaag 227
            ||||||||||||||||||||
Sbjct: 6173 tttatgccatcatgtttaag 6154


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,503,109
Number of Sequences: 3902068
Number of extensions: 5503109
Number of successful extensions: 96879
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96681
Number of HSP's gapped (non-prelim): 195
length of query: 642
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 619
effective length of database: 17,143,297,704
effective search space: 10611701278776
effective search space used: 10611701278776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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