| Clone Name | bags28p24 |
|---|---|
| Clone Library Name | barley_pub |
>MATK_CRAMN (Q8WJQ9) Maturase K (Intron maturase)| Length = 506 Score = 29.6 bits (65), Expect = 2.3 Identities = 13/49 (26%), Positives = 29/49 (59%), Gaps = 3/49 (6%) Frame = +1 Query: 58 LFWKRINFFDDRRFKIRILK*---EFSITLLWFQKPQLKSHAKPQLKSV 195 +F++RI+F++ +++ + + K +F +LWF K + + Q KS+ Sbjct: 237 IFFERIHFYEKKKYPVPVEKVFVNDFPAAILWFFKDPFMHYVRYQGKSI 285
>ROB2_AGRRH (P49409) Protein-tyrosine phosphatase rolB (EC 3.1.3.48) (ROL B| protein) Length = 262 Score = 29.6 bits (65), Expect = 2.3 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%) Frame = +1 Query: 34 VHEFDPRRLF--WKRINFFDDRRFKIRILK*EFSITLLWFQK 153 + F PR L W ++N FD+ +F I +S TL+ FQK Sbjct: 8 LQRFQPRDLTKAWNQLNLFDEIQFAFLIYSQVYSKTLMDFQK 49
>MATK_VAUCA (Q8WJN0) Maturase K (Intron maturase)| Length = 504 Score = 29.6 bits (65), Expect = 2.3 Identities = 12/47 (25%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Frame = +1 Query: 58 LFWKRINFFDDRRFKIR-ILK*EFSITLLWFQKPQLKSHAKPQLKSV 195 +F++RI+F++ +++ + + +F +LWF K + + Q KS+ Sbjct: 237 IFFERIHFYEKKKYPVEEVFVNDFPAAILWFFKDPFMHYVRYQGKSI 283
>MATK_PRUPE (Q8WJP1) Maturase K (Intron maturase)| Length = 506 Score = 29.3 bits (64), Expect = 3.0 Identities = 12/47 (25%), Positives = 29/47 (61%), Gaps = 1/47 (2%) Frame = +1 Query: 58 LFWKRINFFDDRRFKI-RILK*EFSITLLWFQKPQLKSHAKPQLKSV 195 +F++RI+F++ ++ + ++ +F ++LWF K + + Q KS+ Sbjct: 237 IFFERIHFYEKIKYPVEKVFANDFPASILWFFKDPFMHYVRYQGKSI 283
>MATK_PRUDU (Q8WJP3) Maturase K (Intron maturase)| Length = 506 Score = 28.5 bits (62), Expect = 5.1 Identities = 12/47 (25%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Frame = +1 Query: 58 LFWKRINFFDDRRFKIR-ILK*EFSITLLWFQKPQLKSHAKPQLKSV 195 +F++RI+F++ ++ + + +F ++LWF K + + Q KS+ Sbjct: 237 IFFERIHFYEKIKYPVEEVFANDFPASILWFFKDPFMHYVRYQGKSI 283
>ROB1_AGRRH (P20402) Protein-tyrosine phosphatase rolB (EC 3.1.3.48) (ROL B| protein) Length = 259 Score = 28.1 bits (61), Expect = 6.6 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +1 Query: 64 WKRINFFDDRRFKIRILK*EFSITLLWFQK 153 W +IN F+ RF I ++S LL FQK Sbjct: 20 WSQINLFEGIRFAFAIYSRDYSKPLLHFQK 49
>MATK_PRULA (Q8WJP2) Maturase K (Intron maturase)| Length = 500 Score = 28.1 bits (61), Expect = 6.6 Identities = 12/47 (25%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Frame = +1 Query: 58 LFWKRINFFDDRRFKIR-ILK*EFSITLLWFQKPQLKSHAKPQLKSV 195 +F++RI+F++ ++ + + +F +LWF K + + Q KS+ Sbjct: 233 IFFERIHFYEKIKYPVEEVFANDFPAAILWFFKDPFMHYVRYQGKSI 279
>MATK_SPICA (Q8WJN2) Maturase K (Intron maturase)| Length = 502 Score = 27.7 bits (60), Expect = 8.7 Identities = 11/46 (23%), Positives = 28/46 (60%) Frame = +1 Query: 58 LFWKRINFFDDRRFKIRILK*EFSITLLWFQKPQLKSHAKPQLKSV 195 +F+++I+F++ ++ + +F++ +LWF K + + Q KS+ Sbjct: 239 IFFEQIHFYEKIKYPVEN---DFTVAILWFFKDPFMHYVRYQGKSI 281 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,011,506 Number of Sequences: 219361 Number of extensions: 316862 Number of successful extensions: 766 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 764 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 766 length of database: 80,573,946 effective HSP length: 40 effective length of database: 71,799,506 effective search space used: 1723188144 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)