| Clone Name | bags29e23 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK065908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045L08, full insert sequence Length = 2303 Score = 640 bits (323), Expect = e-180 Identities = 539/610 (88%), Gaps = 2/610 (0%) Strand = Plus / Plus Query: 2 gacgcctcatagaatcttgtcttgttagtatcagaggtcctgcggaggcagctgttgaca 61 |||| |||||||| ||||||||||||||||||||||||||||| ||||||||||| || Sbjct: 1407 gacggctcatagagtcttgtcttgttagtatcagaggtcctgctgaggcagctgtggatg 1466 Query: 62 cggtccatggaatcctaaaggaactagtccacaaggctataaatgaaactcatgagctca 121 ||||||||| || || |||||| |||| |||||||| || |||||||| |||||||| | Sbjct: 1467 cggtccatgcgatactcaaggaattagtgcacaaggccatcaatgaaacacatgagctga 1526 Query: 122 agcagttccccactcttcgtgtggaagttggcaatgcagcttttgagtcgttggaaagaa 181 |||||||||||||||||||||||||||| |||||||| ||||||||||| ||||| |||| Sbjct: 1527 agcagttccccactcttcgtgtggaagtaggcaatgcggcttttgagtcattggacagaa 1586 Query: 182 tgagggacgaaagcaagaagaacacattaaagctagttgatatggaaacaagctacttaa 241 ||||||| ||||||||||| |||||||||||||| |||||||||||| |||||||||| Sbjct: 1587 tgagggatgaaagcaagaaaaacacattaaagcttgttgatatggaatgcagctacttaa 1646 Query: 242 ctgtagatttcttcaggaagcttcctcaggatgttgagaagggtggaaatccaagccact 301 | ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 1647 ccgtagatttcttcaggaaacttccccaggatgttgagaagggtggaaatccaagccact 1706 Query: 302 ctattttcgacagatataatgattcttatctaagacgaattgggacaactgttctggcat 361 ||||||| || || |||||||||||||||| ||||||||||| ||||| |||||||||| Sbjct: 1707 ctatttttgatag--ataatgattcttatcttagacgaattggaacaacggttctggcat 1764 Query: 362 atgttaacatggtatcttcaacattgaggaactccatcccaaaatctattgtgtactgcc 421 || |||||||||||| |||||| ||||||||||| || || ||||||||||| ||||| | Sbjct: 1765 atattaacatggtatgttcaaccttgaggaactctattccgaaatctattgtctactgtc 1824 Query: 422 aagtccgtgaggcaaagcgctcattgctcgaccatttctttactgagctgggagcaagag 481 |||| || ||||||||||||||| ||||||| || ||||||||||| |||||||||||| Sbjct: 1825 aagtgcgggaggcaaagcgctcactgctcgatcacttctttactgaattgggagcaagag 1884 Query: 482 agattaggcaactttccaagctcctcgacgaggaccccgcggtcatggagcggaggacaa 541 |||||| |||||||| ||||| || || || |||||||| |||||||| |||||||| | Sbjct: 1885 agattaaacaactttctaagcttcttgatgaagaccccgccgtcatggaacggaggacta 1944 Query: 542 accttgccaagaggctggagctgtaccggagcgcccaagcagagatcgacgcggttgcat 601 | ||||| |||||||||||||| || ||||| || |||||||| || || |||||||||| Sbjct: 1945 atcttgcgaagaggctggagctatatcggagtgctcaagcagaaattgatgcggttgcat 2004 Query: 602 ggtcaaaata 611 |||| ||||| Sbjct: 2005 ggtccaaata 2014
>gb|AY104344.1| Zea mays PCO082748 mRNA sequence Length = 1812 Score = 622 bits (314), Expect = e-175 Identities = 536/610 (87%) Strand = Plus / Plus Query: 2 gacgcctcatagaatcttgtcttgttagtatcagaggtcctgcggaggcagctgttgaca 61 ||||||| ||||||||||||||| ||||||||||||||||||| ||||| ||||||||| Sbjct: 948 gacgccttatagaatcttgtcttattagtatcagaggtcctgctgaggcggctgttgacg 1007 Query: 62 cggtccatggaatcctaaaggaactagtccacaaggctataaatgaaactcatgagctca 121 ||||||||| ||| || ||||| || |||| ||||||||| |||||||| ||||| || | Sbjct: 1008 cggtccatgcaattctcaaggaccttgtccgcaaggctatcaatgaaacacatgaactga 1067 Query: 122 agcagttccccactcttcgtgtggaagttggcaatgcagcttttgagtcgttggaaagaa 181 ||||||| ||||| |||||||||||||| |||||||||||||||||||| ||||| |||| Sbjct: 1068 agcagtttcccacccttcgtgtggaagtaggcaatgcagcttttgagtcattggatagaa 1127 Query: 182 tgagggacgaaagcaagaagaacacattaaagctagttgatatggaaacaagctacttaa 241 ||||||| ||||||||||| || ||||||||||||||||| |||||| |||||||| | Sbjct: 1128 tgagggatgaaagcaagaaaaatacattaaagctagttgacatggaatgcagctacttga 1187 Query: 242 ctgtagatttcttcaggaagcttcctcaggatgttgagaagggtggaaatccaagccact 301 | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1188 cagtagatttcttcaggaagcttcctcaggatgttgagaggggtggaaatccaagccact 1247 Query: 302 ctattttcgacagatataatgattcttatctaagacgaattgggacaactgttctggcat 361 ||||||| || ||||||||||| |||||||| ||||||||||| |||||||||| ||| Sbjct: 1248 ctatttttgatagatataatgactcttatcttagacgaattggacaaactgttctgtcat 1307 Query: 362 atgttaacatggtatcttcaacattgaggaactccatcccaaaatctattgtgtactgcc 421 ||||||| ||||| | ||| || ||||||||||||||||||||||||||||| || |||| Sbjct: 1308 atgttaatatggtgtgttcgaccttgaggaactccatcccaaaatctattgtttattgcc 1367 Query: 422 aagtccgtgaggcaaagcgctcattgctcgaccatttctttactgagctgggagcaagag 481 |||| || ||||| |||||||| ||||||| || ||||| ||||| ||||||||||||| Sbjct: 1368 aagtgcgagaggccaagcgctcgctgctcgatcacttcttcactgaactgggagcaagag 1427 Query: 482 agattaggcaactttccaagctcctcgacgaggaccccgcggtcatggagcggaggacaa 541 |||| | ||||||||||||||| |||||||| || || || |||||||| || || || | Sbjct: 1428 agatgaagcaactttccaagcttctcgacgaagatccagcagtcatggaacgcagaacta 1487 Query: 542 accttgccaagaggctggagctgtaccggagcgcccaagcagagatcgacgcggttgcat 601 ||||||| ||||||||||||||||||||||| |||||| | || ||||| || || |||| Sbjct: 1488 accttgcaaagaggctggagctgtaccggagtgcccaatcggaaatcgatgcagtcgcat 1547 Query: 602 ggtcaaaata 611 |||| ||||| Sbjct: 1548 ggtccaaata 1557
>gb|BT017132.1| Zea mays clone EL01N0365G02.c mRNA sequence Length = 1266 Score = 575 bits (290), Expect = e-161 Identities = 530/610 (86%) Strand = Plus / Plus Query: 2 gacgcctcatagaatcttgtcttgttagtatcagaggtcctgcggaggcagctgttgaca 61 ||||||| ||||||||||||||| ||||||||||||||||||| ||||| ||||||||| Sbjct: 420 gacgccttatagaatcttgtcttattagtatcagaggtcctgctgaggcggctgttgacg 479 Query: 62 cggtccatggaatcctaaaggaactagtccacaaggctataaatgaaactcatgagctca 121 ||||||||| ||| || ||||| || |||| ||||||||| |||||||| ||||| || | Sbjct: 480 cggtccatgcaattctcaaggaccttgtccgcaaggctatcaatgaaacacatgaactga 539 Query: 122 agcagttccccactcttcgtgtggaagttggcaatgcagcttttgagtcgttggaaagaa 181 ||||||| ||||| |||||||||||||| |||||||||||||||||||| ||||| |||| Sbjct: 540 agcagtttcccacccttcgtgtggaagtaggcaatgcagcttttgagtcattggatagaa 599 Query: 182 tgagggacgaaagcaagaagaacacattaaagctagttgatatggaaacaagctacttaa 241 ||||||| ||||||||||| || ||||||||||||||||| |||||| |||||||| | Sbjct: 600 tgagggatgaaagcaagaaaaatacattaaagctagttgacatggaatgcagctacttga 659 Query: 242 ctgtagatttcttcaggaagcttcctcaggatgttgagaagggtggaaatccaagccact 301 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 660 cagtagatttcttcaggaagcttcctcaggatgttgagaagggtggaaatccaagccact 719 Query: 302 ctattttcgacagatataatgattcttatctaagacgaattgggacaactgttctggcat 361 ||||||| || ||||||||||| |||||||| ||||||||||| |||||||||| ||| Sbjct: 720 ctatttttgatagatataatgactcttatcttagacgaattggacaaactgttctgtcat 779 Query: 362 atgttaacatggtatcttcaacattgaggaactccatcccaaaatctattgtgtactgcc 421 ||||||| ||||| | ||| || ||||||||||||||||||||||||||||| || || | Sbjct: 780 atgttaatatggtgtgttcgaccttgaggaactccatcccaaaatctattgtttattgtc 839 Query: 422 aagtccgtgaggcaaagcgctcattgctcgaccatttctttactgagctgggagcaagag 481 |||| || || | |||||||| ||||||| || ||||| ||||| || |||||||||| Sbjct: 840 aagtgcgagaaggcaagcgctcgctgctcgatcacttcttcactgaacttggagcaagag 899 Query: 482 agattaggcaactttccaagctcctcgacgaggaccccgcggtcatggagcggaggacaa 541 |||| | ||| |||||||| || || ||||| ||||| || |||||||| || || || | Sbjct: 900 agatgaagcagctttccaaacttcttgacgaagacccagcagtcatggaacgcagaacta 959 Query: 542 accttgccaagaggctggagctgtaccggagcgcccaagcagagatcgacgcggttgcat 601 ||||||| |||||||| |||||||||||||| |||||| | || || || || ||||||| Sbjct: 960 accttgcaaagaggctcgagctgtaccggagtgcccaatccgaaattgatgccgttgcat 1019 Query: 602 ggtcaaaata 611 |||| ||||| Sbjct: 1020 ggtccaaata 1029
>ref|XM_475890.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1623 Score = 426 bits (215), Expect = e-116 Identities = 311/343 (90%) Strand = Plus / Plus Query: 2 gacgcctcatagaatcttgtcttgttagtatcagaggtcctgcggaggcagctgttgaca 61 |||| |||||||| ||||||||||||||||||||||||||||| ||||||||||| || Sbjct: 1220 gacggctcatagagtcttgtcttgttagtatcagaggtcctgctgaggcagctgtggatg 1279 Query: 62 cggtccatggaatcctaaaggaactagtccacaaggctataaatgaaactcatgagctca 121 ||||||||| || || |||||| |||| |||||||| || |||||||| |||||||| | Sbjct: 1280 cggtccatgcgatactcaaggaattagtgcacaaggccatcaatgaaacacatgagctga 1339 Query: 122 agcagttccccactcttcgtgtggaagttggcaatgcagcttttgagtcgttggaaagaa 181 |||||||||||||||||||||||||||| |||||||| ||||||||||| ||||| |||| Sbjct: 1340 agcagttccccactcttcgtgtggaagtaggcaatgcggcttttgagtcattggacagaa 1399 Query: 182 tgagggacgaaagcaagaagaacacattaaagctagttgatatggaaacaagctacttaa 241 ||||||| ||||||||||| |||||||||||||| |||||||||||| |||||||||| Sbjct: 1400 tgagggatgaaagcaagaaaaacacattaaagcttgttgatatggaatgcagctacttaa 1459 Query: 242 ctgtagatttcttcaggaagcttcctcaggatgttgagaagggtggaaatccaagccact 301 | ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 1460 ccgtagatttcttcaggaaacttccccaggatgttgagaagggtggaaatccaagccact 1519 Query: 302 ctattttcgacagatataatgattcttatctaagacgaattgg 344 ||||||| || |||||||||||||||||||| ||||||||||| Sbjct: 1520 ctatttttgatagatataatgattcttatcttagacgaattgg 1562
>dbj|AK072230.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002D21, full insert sequence Length = 2691 Score = 383 bits (193), Expect = e-103 Identities = 490/589 (83%) Strand = Plus / Plus Query: 10 atagaatcttgtcttgttagtatcagaggtcctgcggaggcagctgttgacacggtccat 69 ||||| ||||| || || ||||| |||||||| || |||||||||||||| |||||||| Sbjct: 1935 atagagtcttgcctagtaagtattagaggtccggctgaggcagctgttgatgcggtccat 1994 Query: 70 ggaatcctaaaggaactagtccacaaggctataaatgaaactcatgagctcaagcagttc 129 | ||| || ||||||||||| | ||||||||| | ||| || ||||| | || || ||| Sbjct: 1995 gcaatactcaaggaactagttcgcaaggctatcagtgagacagatgagttaaatcaattc 2054 Query: 130 cccactcttcgtgtggaagttggcaatgcagcttttgagtcgttggaaagaatgagggac 189 |||||||| ||||||||| | |||||||||||||||| || ||||| |||||| || | Sbjct: 2055 cccactctccgtgtggaaataagcaatgcagcttttgaatcattggacagaatgcggaat 2114 Query: 190 gaaagcaagaagaacacattaaagctagttgatatggaaacaagctacttaactgtagat 249 ||||||||||| | || | ||||| ||||||||||| ||||| |||||||| ||| Sbjct: 2115 gaaagcaagaaaagtactctgaagctggttgatatggagtgcagctatttaactgttgat 2174 Query: 250 ttcttcaggaagcttcctcaggatgttgagaagggtggaaatccaagccactctattttc 309 ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2175 ttcttttggaagcttcctcaggatgttgagaagggtggaaatccaacaaactctattttt 2234 Query: 310 gacagatataatgattcttatctaagacgaattgggacaactgttctggcatatgttaac 369 |||||||| |||||||| || || ||||||||| | || | ||||||||||||||| || Sbjct: 2235 gacagatacaatgattcataccttagacgaattagtactaatgttctggcatatgtcaat 2294 Query: 370 atggtatcttcaacattgaggaactccatcccaaaatctattgtgtactgccaagtccgt 429 ||||||| ||||| ||||| ||||||||||| ||||||||||| || ||||||||||| Sbjct: 2295 atggtatgttcaagcttgagaaactccatccctaaatctattgtttattgccaagtccgg 2354 Query: 430 gaggcaaagcgctcattgctcgaccatttctttactgagctgggagcaagagagattagg 489 |||||||||||| |||||||||| | |||||||| || |||||||||||||||| | | Sbjct: 2355 gaggcaaagcgcacattgctcgatcgcttctttacagaattgggagcaagagagatcaag 2414 Query: 490 caactttccaagctcctcgacgaggaccccgcggtcatggagcggaggacaaaccttgcc 549 || |||| ||||| || || || ||||||||||| |||||||| || | ||||| ||| Sbjct: 2415 cacatttctaagcttcttgatgaagaccccgcggtgatggagcgtagagctaacctcgcc 2474 Query: 550 aagaggctggagctgtaccggagcgcccaagcagagatcgacgcggttg 598 |||||| |||| || || ||||||||||| ||||| ||||| ||||||| Sbjct: 2475 aagaggttggaactatatcggagcgcccaggcagaaatcgatgcggttg 2523
>ref|NM_192052.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1935 Score = 333 bits (168), Expect = 5e-88 Identities = 396/472 (83%) Strand = Plus / Plus Query: 127 ttccccactcttcgtgtggaagttggcaatgcagcttttgagtcgttggaaagaatgagg 186 ||||||||||| ||||||||| | |||||||||||||||| || ||||| |||||| || Sbjct: 1450 ttccccactctccgtgtggaaataagcaatgcagcttttgaatcattggacagaatgcgg 1509 Query: 187 gacgaaagcaagaagaacacattaaagctagttgatatggaaacaagctacttaactgta 246 | ||||||||||| | || | ||||| ||||||||||| ||||| |||||||| Sbjct: 1510 aatgaaagcaagaaaagtactctgaagctggttgatatggagtgcagctatttaactgtt 1569 Query: 247 gatttcttcaggaagcttcctcaggatgttgagaagggtggaaatccaagccactctatt 306 |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1570 gatttcttttggaagcttcctcaggatgttgagaagggtggaaatccaacaaactctatt 1629 Query: 307 ttcgacagatataatgattcttatctaagacgaattgggacaactgttctggcatatgtt 366 || |||||||| |||||||| || || ||||||||| | || | ||||||||||||||| Sbjct: 1630 tttgacagatacaatgattcataccttagacgaattagtactaatgttctggcatatgtc 1689 Query: 367 aacatggtatcttcaacattgaggaactccatcccaaaatctattgtgtactgccaagtc 426 || ||||||| ||||| ||||| ||||||||||| ||||||||||| || ||||||||| Sbjct: 1690 aatatggtatgttcaagcttgagaaactccatccctaaatctattgtttattgccaagtc 1749 Query: 427 cgtgaggcaaagcgctcattgctcgaccatttctttactgagctgggagcaagagagatt 486 || |||||||||||| |||||||||| | |||||||| || |||||||||||||||| Sbjct: 1750 cgggaggcaaagcgcacattgctcgatcgcttctttacagaattgggagcaagagagatc 1809 Query: 487 aggcaactttccaagctcctcgacgaggaccccgcggtcatggagcggaggacaaacctt 546 | ||| |||| ||||| || || || ||||||||||| |||||||| || | ||||| Sbjct: 1810 aagcacatttctaagcttcttgatgaagaccccgcggtgatggagcgtagagctaacctc 1869 Query: 547 gccaagaggctggagctgtaccggagcgcccaagcagagatcgacgcggttg 598 ||||||||| |||| || || ||||||||||| ||||| ||||| ||||||| Sbjct: 1870 gccaagaggttggaactatatcggagcgcccaggcagaaatcgatgcggttg 1921
>gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1214_E03, complete sequence Length = 144601 Score = 321 bits (162), Expect = 2e-84 Identities = 213/230 (92%) Strand = Plus / Minus Query: 115 gagctcaagcagttccccactcttcgtgtggaagttggcaatgcagcttttgagtcgttg 174 ||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 25056 gagctgaagcagttccccactcttcgtgtggaagtaggcaatgcggcttttgagtcattg 24997 Query: 175 gaaagaatgagggacgaaagcaagaagaacacattaaagctagttgatatggaaacaagc 234 || ||||||||||| ||||||||||| |||||||||||||| |||||||||||| ||| Sbjct: 24996 gacagaatgagggatgaaagcaagaaaaacacattaaagcttgttgatatggaatgcagc 24937 Query: 235 tacttaactgtagatttcttcaggaagcttcctcaggatgttgagaagggtggaaatcca 294 |||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 24936 tacttaaccgtagatttcttcaggaaacttccccaggatgttgagaagggtggaaatcca 24877 Query: 295 agccactctattttcgacagatataatgattcttatctaagacgaattgg 344 |||||||||||||| || |||||||||||||||||||| ||||||||||| Sbjct: 24876 agccactctatttttgatagatataatgattcttatcttagacgaattgg 24827 Score = 147 bits (74), Expect = 6e-32 Identities = 122/138 (88%) Strand = Plus / Minus Query: 346 acaactgttctggcatatgttaacatggtatcttcaacattgaggaactccatcccaaaa 405 ||||| |||||||||||| |||||||||||| |||||| ||||||||||| || || ||| Sbjct: 24588 acaacggttctggcatatattaacatggtatgttcaaccttgaggaactctattccgaaa 24529 Query: 406 tctattgtgtactgccaagtccgtgaggcaaagcgctcattgctcgaccatttctttact 465 |||||||| ||||| ||||| || ||||||||||||||| ||||||| || ||||||||| Sbjct: 24528 tctattgtctactgtcaagtgcgggaggcaaagcgctcactgctcgatcacttctttact 24469 Query: 466 gagctgggagcaagagag 483 || |||||||||||||| Sbjct: 24468 gaattgggagcaagagag 24451 Score = 99.6 bits (50), Expect = 1e-17 Identities = 104/122 (85%) Strand = Plus / Minus Query: 490 caactttccaagctcctcgacgaggaccccgcggtcatggagcggaggacaaaccttgcc 549 |||||||| ||||| || || || |||||||| |||||||| |||||||| || ||||| Sbjct: 24308 caactttctaagcttcttgatgaagaccccgccgtcatggaacggaggactaatcttgcg 24249 Query: 550 aagaggctggagctgtaccggagcgcccaagcagagatcgacgcggttgcatggtcaaaa 609 |||||||||||||| || ||||| || |||||||| || || |||||||||||||| ||| Sbjct: 24248 aagaggctggagctatatcggagtgctcaagcagaaattgatgcggttgcatggtccaaa 24189 Query: 610 ta 611 || Sbjct: 24188 ta 24187 Score = 85.7 bits (43), Expect = 2e-13 Identities = 52/55 (94%) Strand = Plus / Minus Query: 2 gacgcctcatagaatcttgtcttgttagtatcagaggtcctgcggaggcagctgt 56 |||| |||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 25602 gacggctcatagagtcttgtcttgttagtatcagaggtcctgctgaggcagctgt 25548
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 321 bits (162), Expect = 2e-84 Identities = 213/230 (92%) Strand = Plus / Minus Query: 115 gagctcaagcagttccccactcttcgtgtggaagttggcaatgcagcttttgagtcgttg 174 ||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 27428926 gagctgaagcagttccccactcttcgtgtggaagtaggcaatgcggcttttgagtcattg 27428867 Query: 175 gaaagaatgagggacgaaagcaagaagaacacattaaagctagttgatatggaaacaagc 234 || ||||||||||| ||||||||||| |||||||||||||| |||||||||||| ||| Sbjct: 27428866 gacagaatgagggatgaaagcaagaaaaacacattaaagcttgttgatatggaatgcagc 27428807 Query: 235 tacttaactgtagatttcttcaggaagcttcctcaggatgttgagaagggtggaaatcca 294 |||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 27428806 tacttaaccgtagatttcttcaggaaacttccccaggatgttgagaagggtggaaatcca 27428747 Query: 295 agccactctattttcgacagatataatgattcttatctaagacgaattgg 344 |||||||||||||| || |||||||||||||||||||| ||||||||||| Sbjct: 27428746 agccactctatttttgatagatataatgattcttatcttagacgaattgg 27428697 Score = 147 bits (74), Expect = 6e-32 Identities = 122/138 (88%) Strand = Plus / Minus Query: 346 acaactgttctggcatatgttaacatggtatcttcaacattgaggaactccatcccaaaa 405 ||||| |||||||||||| |||||||||||| |||||| ||||||||||| || || ||| Sbjct: 27428458 acaacggttctggcatatattaacatggtatgttcaaccttgaggaactctattccgaaa 27428399 Query: 406 tctattgtgtactgccaagtccgtgaggcaaagcgctcattgctcgaccatttctttact 465 |||||||| ||||| ||||| || ||||||||||||||| ||||||| || ||||||||| Sbjct: 27428398 tctattgtctactgtcaagtgcgggaggcaaagcgctcactgctcgatcacttctttact 27428339 Query: 466 gagctgggagcaagagag 483 || |||||||||||||| Sbjct: 27428338 gaattgggagcaagagag 27428321 Score = 99.6 bits (50), Expect = 1e-17 Identities = 104/122 (85%) Strand = Plus / Minus Query: 490 caactttccaagctcctcgacgaggaccccgcggtcatggagcggaggacaaaccttgcc 549 |||||||| ||||| || || || |||||||| |||||||| |||||||| || ||||| Sbjct: 27428178 caactttctaagcttcttgatgaagaccccgccgtcatggaacggaggactaatcttgcg 27428119 Query: 550 aagaggctggagctgtaccggagcgcccaagcagagatcgacgcggttgcatggtcaaaa 609 |||||||||||||| || ||||| || |||||||| || || |||||||||||||| ||| Sbjct: 27428118 aagaggctggagctatatcggagtgctcaagcagaaattgatgcggttgcatggtccaaa 27428059 Query: 610 ta 611 || Sbjct: 27428058 ta 27428057 Score = 85.7 bits (43), Expect = 2e-13 Identities = 52/55 (94%) Strand = Plus / Minus Query: 2 gacgcctcatagaatcttgtcttgttagtatcagaggtcctgcggaggcagctgt 56 |||| |||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 27429472 gacggctcatagagtcttgtcttgttagtatcagaggtcctgctgaggcagctgt 27429418
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 167 bits (84), Expect = 6e-38 Identities = 183/216 (84%) Strand = Plus / Plus Query: 127 ttccccactcttcgtgtggaagttggcaatgcagcttttgagtcgttggaaagaatgagg 186 ||||||||||| ||||||||| | |||||||||||||||| || ||||| |||||| || Sbjct: 28052519 ttccccactctccgtgtggaaataagcaatgcagcttttgaatcattggacagaatgcgg 28052578 Query: 187 gacgaaagcaagaagaacacattaaagctagttgatatggaaacaagctacttaactgta 246 | ||||||||||| | || | ||||| ||||||||||| ||||| |||||||| Sbjct: 28052579 aatgaaagcaagaaaagtactctgaagctggttgatatggagtgcagctatttaactgtt 28052638 Query: 247 gatttcttcaggaagcttcctcaggatgttgagaagggtggaaatccaagccactctatt 306 |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 28052639 gatttcttttggaagcttcctcaggatgttgagaagggtggaaatccaacaaactctatt 28052698 Query: 307 ttcgacagatataatgattcttatctaagacgaatt 342 || |||||||| |||||||| || || ||||||||| Sbjct: 28052699 tttgacagatacaatgattcataccttagacgaatt 28052734 Score = 129 bits (65), Expect = 1e-26 Identities = 116/133 (87%) Strand = Plus / Plus Query: 351 tgttctggcatatgttaacatggtatcttcaacattgaggaactccatcccaaaatctat 410 ||||||||||||||| || ||||||| ||||| ||||| ||||||||||| |||||||| Sbjct: 28052965 tgttctggcatatgtcaatatggtatgttcaagcttgagaaactccatccctaaatctat 28053024 Query: 411 tgtgtactgccaagtccgtgaggcaaagcgctcattgctcgaccatttctttactgagct 470 ||| || ||||||||||| |||||||||||| |||||||||| | |||||||| || | Sbjct: 28053025 tgtttattgccaagtccgggaggcaaagcgcacattgctcgatcgcttctttacagaatt 28053084 Query: 471 gggagcaagagag 483 ||||||||||||| Sbjct: 28053085 gggagcaagagag 28053097 Score = 65.9 bits (33), Expect = 2e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 514 gaccccgcggtcatggagcggaggacaaaccttgccaagaggctggagctgtaccggagc 573 ||||||||||| |||||||| || | ||||| ||||||||| |||| || || |||||| Sbjct: 28053601 gaccccgcggtgatggagcgtagagctaacctcgccaagaggttggaactatatcggagc 28053660 Query: 574 gcccaagcagagatcgacgcggttg 598 ||||| ||||| ||||| ||||||| Sbjct: 28053661 gcccaggcagaaatcgatgcggttg 28053685 Score = 44.1 bits (22), Expect = 0.63 Identities = 43/50 (86%) Strand = Plus / Plus Query: 10 atagaatcttgtcttgttagtatcagaggtcctgcggaggcagctgttga 59 ||||| ||||| || || ||||| |||||||| || |||||||||||||| Sbjct: 28051959 atagagtcttgcctagtaagtattagaggtccggctgaggcagctgttga 28052008
>dbj|AP004363.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0019E03 Length = 152092 Score = 167 bits (84), Expect = 6e-38 Identities = 183/216 (84%) Strand = Plus / Plus Query: 127 ttccccactcttcgtgtggaagttggcaatgcagcttttgagtcgttggaaagaatgagg 186 ||||||||||| ||||||||| | |||||||||||||||| || ||||| |||||| || Sbjct: 67718 ttccccactctccgtgtggaaataagcaatgcagcttttgaatcattggacagaatgcgg 67777 Query: 187 gacgaaagcaagaagaacacattaaagctagttgatatggaaacaagctacttaactgta 246 | ||||||||||| | || | ||||| ||||||||||| ||||| |||||||| Sbjct: 67778 aatgaaagcaagaaaagtactctgaagctggttgatatggagtgcagctatttaactgtt 67837 Query: 247 gatttcttcaggaagcttcctcaggatgttgagaagggtggaaatccaagccactctatt 306 |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 67838 gatttcttttggaagcttcctcaggatgttgagaagggtggaaatccaacaaactctatt 67897 Query: 307 ttcgacagatataatgattcttatctaagacgaatt 342 || |||||||| |||||||| || || ||||||||| Sbjct: 67898 tttgacagatacaatgattcataccttagacgaatt 67933 Score = 129 bits (65), Expect = 1e-26 Identities = 116/133 (87%) Strand = Plus / Plus Query: 351 tgttctggcatatgttaacatggtatcttcaacattgaggaactccatcccaaaatctat 410 ||||||||||||||| || ||||||| ||||| ||||| ||||||||||| |||||||| Sbjct: 68164 tgttctggcatatgtcaatatggtatgttcaagcttgagaaactccatccctaaatctat 68223 Query: 411 tgtgtactgccaagtccgtgaggcaaagcgctcattgctcgaccatttctttactgagct 470 ||| || ||||||||||| |||||||||||| |||||||||| | |||||||| || | Sbjct: 68224 tgtttattgccaagtccgggaggcaaagcgcacattgctcgatcgcttctttacagaatt 68283 Query: 471 gggagcaagagag 483 ||||||||||||| Sbjct: 68284 gggagcaagagag 68296 Score = 65.9 bits (33), Expect = 2e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 514 gaccccgcggtcatggagcggaggacaaaccttgccaagaggctggagctgtaccggagc 573 ||||||||||| |||||||| || | ||||| ||||||||| |||| || || |||||| Sbjct: 68800 gaccccgcggtgatggagcgtagagctaacctcgccaagaggttggaactatatcggagc 68859 Query: 574 gcccaagcagagatcgacgcggttg 598 ||||| ||||| ||||| ||||||| Sbjct: 68860 gcccaggcagaaatcgatgcggttg 68884 Score = 44.1 bits (22), Expect = 0.63 Identities = 43/50 (86%) Strand = Plus / Plus Query: 10 atagaatcttgtcttgttagtatcagaggtcctgcggaggcagctgttga 59 ||||| ||||| || || ||||| |||||||| || |||||||||||||| Sbjct: 67158 atagagtcttgcctagtaagtattagaggtccggctgaggcagctgttga 67207
>gb|AY463019.1| Musa acuminata putative phragmoplastin 5 mRNA, partial cds Length = 509 Score = 153 bits (77), Expect = 9e-34 Identities = 149/173 (86%) Strand = Plus / Plus Query: 301 tctattttcgacagatataatgattcttatctaagacgaattgggacaactgttctggca 360 |||||||| || ||||| ||||| |||||||| ||||| || || ||||||||||||||| Sbjct: 21 tctatttttgatagatacaatgactcttatctcagacgtataggaacaactgttctggca 80 Query: 361 tatgttaacatggtatcttcaacattgaggaactccatcccaaaatctattgtgtactgc 420 ||||| |||||||||| ||||| ||| |||||||||||||||| |||||||| ||||| Sbjct: 81 tatgtcaacatggtatgttcaagcttgcggaactccatcccaaagtctattgtttactgt 140 Query: 421 caagtccgtgaggcaaagcgctcattgctcgaccatttctttactgagctggg 473 ||||| || ||||| || ||||| ||||| || ||||||||||||||| |||| Sbjct: 141 caagtgcgagaggctaaacgctccttgcttgatcatttctttactgagttggg 193
>gb|U36430.1|GMU36430 Glycine max dynamin-like protein SDL5A mRNA, complete cds Length = 2134 Score = 87.7 bits (44), Expect = 5e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 241 actgtagatttcttcaggaagcttcctcaggatgttgagaagggtggaaatccaagccac 300 ||||| |||||||| ||||||||||||| |||||||| |||||||| ||||| | || Sbjct: 1588 actgttgatttctttcggaagcttcctcaagatgttgataagggtggcaatcccacacat 1647 Query: 301 tctattttcgacagatataatgattcttatctaagacgaattgg 344 || ||||| || |||||||||||||| |||||||| |||||||| Sbjct: 1648 tcaatttttgatagatataatgattcatatctaaggcgaattgg 1691
>ref|NM_180789.1| Arabidopsis thaliana ADL1 (ARABIDOPSIS DYNAMIN-LIKE PROTEIN); GTP binding AT5G42080 (ADL1) transcript variant AT5G42080.1 mRNA, complete cds Length = 2427 Score = 81.8 bits (41), Expect = 3e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 241 actgtagatttcttcaggaagcttcctcaggatgttgagaagggtggaaatccaagccac 300 ||||| |||||||||||||| ||||| |||||||||||||||||||| || || | ||| Sbjct: 1679 actgttgatttcttcaggaaacttccccaggatgttgagaagggtggtaaccccacacac 1738 Query: 301 tctattttcgacagatataatgattcttatctaagacgaat 341 || ||||||||| | || || ||||| ||||| |||||||| Sbjct: 1739 tccattttcgaccgctacaacgattcctatctcagacgaat 1779
>gb|BT001063.1| Arabidopsis thaliana At5g42080/MJC20_19 mRNA, complete cds Length = 1833 Score = 81.8 bits (41), Expect = 3e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 241 actgtagatttcttcaggaagcttcctcaggatgttgagaagggtggaaatccaagccac 300 ||||| |||||||||||||| ||||| |||||||||||||||||||| || || | ||| Sbjct: 1462 actgttgatttcttcaggaaacttccccaggatgttgagaagggtggtaaccccacacac 1521 Query: 301 tctattttcgacagatataatgattcttatctaagacgaat 341 || ||||||||| | || || ||||| ||||| |||||||| Sbjct: 1522 tccattttcgaccgctacaacgattcctatctcagacgaat 1562
>gb|AY094408.1| Arabidopsis thaliana AT5g42080/MJC20_19 mRNA, complete cds Length = 2269 Score = 81.8 bits (41), Expect = 3e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 241 actgtagatttcttcaggaagcttcctcaggatgttgagaagggtggaaatccaagccac 300 ||||| |||||||||||||| ||||| |||||||||||||||||||| || || | ||| Sbjct: 1679 actgttgatttcttcaggaaacttccccaggatgttgagaagggtggtaaccccacacac 1738 Query: 301 tctattttcgacagatataatgattcttatctaagacgaat 341 || ||||||||| | || || ||||| ||||| |||||||| Sbjct: 1739 tccattttcgaccgctacaacgattcctatctcagacgaat 1779
>dbj|AB017067.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJC20 Length = 83689 Score = 81.8 bits (41), Expect = 3e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 241 actgtagatttcttcaggaagcttcctcaggatgttgagaagggtggaaatccaagccac 300 ||||| |||||||||||||| ||||| |||||||||||||||||||| || || | ||| Sbjct: 43423 actgttgatttcttcaggaaacttccccaggatgttgagaagggtggtaaccccacacac 43364 Query: 301 tctattttcgacagatataatgattcttatctaagacgaat 341 || ||||||||| | || || ||||| ||||| |||||||| Sbjct: 43363 tccattttcgaccgctacaacgattcctatctcagacgaat 43323
>gb|L36939.1|ATHDYNAGTP Arabidopsis thaliana dynamin-like GTP binding protein mRNA, complete cds Length = 2160 Score = 81.8 bits (41), Expect = 3e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 241 actgtagatttcttcaggaagcttcctcaggatgttgagaagggtggaaatccaagccac 300 ||||| |||||||||||||| ||||| |||||||||||||||||||| || || | ||| Sbjct: 1559 actgttgatttcttcaggaaacttccccaggatgttgagaagggtggtaaccccacacac 1618 Query: 301 tctattttcgacagatataatgattcttatctaagacgaat 341 || ||||||||| | || || ||||| ||||| |||||||| Sbjct: 1619 tccattttcgaccgctacaacgattcctatctcagacgaat 1659
>gb|L38614.1|ATHGTPBPA Arabidopsis thaliana GTP-binding protein mRNA, complete cds Length = 2234 Score = 81.8 bits (41), Expect = 3e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 241 actgtagatttcttcaggaagcttcctcaggatgttgagaagggtggaaatccaagccac 300 ||||| |||||||||||||| ||||| |||||||||||||||||||| || || | ||| Sbjct: 1668 actgttgatttcttcaggaaacttccccaggatgttgagaagggtggtaaccccacacac 1727 Query: 301 tctattttcgacagatataatgattcttatctaagacgaat 341 || ||||||||| | || || ||||| ||||| |||||||| Sbjct: 1728 tccattttcgaccgctacaacgattcctatctcagacgaat 1768
>emb|AJ244024.1|NTA244024 Nicotiana tabacum mRNA for phragmoplastin, dynamin-like protein Length = 2193 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 241 actgtagatttcttcaggaagcttcctcaggatgttgagaagggtggaaatccaagccac 300 ||||||||||||||| |||| |||||||| ||| |||||||||| |||||||||| || Sbjct: 1572 actgtagatttcttccggaaacttcctcaagatattgagaagggaggaaatccaacacat 1631 Query: 301 tctattttcgacagatataatgattcttatct 332 || ||||| ||| | ||||||||||| ||||| Sbjct: 1632 tcaatttttgaccggtataatgattcctatct 1663
>gb|U25547.1|GMU25547 Glycine max dynamin-like protein SDL12A mRNA, complete cds Length = 2211 Score = 79.8 bits (40), Expect = 1e-11 Identities = 88/104 (84%) Strand = Plus / Plus Query: 241 actgtagatttcttcaggaagcttcctcaggatgttgagaagggtggaaatccaagccac 300 ||||| |||||||| ||||||||||||| |||||||| |||||||| ||||| | || Sbjct: 1636 actgttgatttctttcggaagcttcctcaagatgttgataagggtggcaatcccacacat 1695 Query: 301 tctattttcgacagatataatgattcttatctaagacgaattgg 344 || |||| || |||||||||||||| |||||||| |||||||| Sbjct: 1696 tcaatttgtgatagatataatgattcatatctaaggcgaattgg 1739
>dbj|AP004493.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT08D16, TM0025b, complete sequence Length = 36100 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 247 gatttcttcaggaagcttcctcaggatgttgagaagggtggaaatccaagccactctatt 306 |||||||| ||||||||||||| ||||| || |||||||| ||||| | || || ||| Sbjct: 33348 gatttctttcggaagcttcctcaagatgtagataagggtggcaatcccacacattcaatt 33407 Query: 307 ttcgacagatataatgattcttatctaagacgaattgg 344 || || |||||||||||||| |||||||| |||||||| Sbjct: 33408 tttgatagatataatgattcatatctaaggcgaattgg 33445
>gb|AC142526.5| Medicago truncatula clone mth2-34h20, complete sequence Length = 113622 Score = 54.0 bits (27), Expect = 7e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 262 cttcctcaggatgttgagaagggtggaaatccaagccactctattttcgacagatataat 321 |||||||| ||||| || |||||||| ||||| | || || ||||| || ||||||||| Sbjct: 27147 cttcctcaagatgtagacaagggtggcaatcctacacattcaatttttgatagatataat 27088 Query: 322 gattcttatctaagacgaattgg 344 ||||| ||||| || |||||||| Sbjct: 27087 gattcatatcttaggcgaattgg 27065 Score = 48.1 bits (24), Expect = 0.040 Identities = 48/56 (85%) Strand = Plus / Minus Query: 4 cgcctcatagaatcttgtcttgttagtatcagaggtcctgcggaggcagctgttga 59 |||||||| ||||||| ||| ||||||||| || ||||| |||||||||||||| Sbjct: 28616 cgcctcattgaatcttctctaactagtatcaggggccctgccgaggcagctgttga 28561
>ref|NM_116041.2| Arabidopsis thaliana GTP binding / GTPase AT3G61760 mRNA, complete cds Length = 1926 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Plus Query: 385 ttgaggaactccatcccaaaatctattgtgtactgccaagtccgtgaggcaaa 437 ||||| |||||||| || ||||| ||||| ||||| ||||||||||| ||||| Sbjct: 1667 ttgagaaactccataccgaaatccattgtttactgtcaagtccgtgaagcaaa 1719
>emb|AL138642.1|ATF21F14 Arabidopsis thaliana DNA chromosome 3, BAC clone F21F14 Length = 142001 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 385 ttgaggaactccatcccaaaatctattgtgtactgccaagtccgtgaggcaaa 437 ||||| |||||||| || ||||| ||||| ||||| ||||||||||| ||||| Sbjct: 23544 ttgagaaactccataccgaaatccattgtttactgtcaagtccgtgaagcaaa 23492
>emb|AL132959.1|ATF15G16 Arabidopsis thaliana DNA chromosome 3, BAC clone F15G16 Length = 104868 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 385 ttgaggaactccatcccaaaatctattgtgtactgccaagtccgtgaggcaaa 437 ||||| |||||||| || ||||| ||||| ||||| ||||||||||| ||||| Sbjct: 72232 ttgagaaactccataccgaaatccattgtttactgtcaagtccgtgaagcaaa 72180
>gb|AY189279.1| Arabidopsis thaliana dynamin-like protein B mRNA, complete cds Length = 1926 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Plus Query: 385 ttgaggaactccatcccaaaatctattgtgtactgccaagtccgtgaggcaaa 437 ||||| |||||||| || ||||| ||||| ||||| ||||||||||| ||||| Sbjct: 1667 ttgagaaactccataccgaaatccattgtttactgtcaagtccgtgaagcaaa 1719
>gb|AC109458.3| Homo sapiens chromosome 5 clone RP11-257I8, complete sequence Length = 162191 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 107 aaactcatgagctcaagcagttc 129 ||||||||||||||||||||||| Sbjct: 16873 aaactcatgagctcaagcagttc 16895
>gb|AC109464.2| Homo sapiens chromosome 5 clone RP11-284A20, complete sequence Length = 161641 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 107 aaactcatgagctcaagcagttc 129 ||||||||||||||||||||||| Sbjct: 150543 aaactcatgagctcaagcagttc 150565
>gb|AC147474.2| Mus musculus BAC clone RP23-425D11 from chromosome 19, complete sequence Length = 195273 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 gaaactcatgagctcaagcag 126 ||||||||||||||||||||| Sbjct: 27806 gaaactcatgagctcaagcag 27786
>gb|AC134906.3| Mus musculus BAC clone RP23-361K7 from chromosome 19, complete sequence Length = 192484 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 gaaactcatgagctcaagcag 126 ||||||||||||||||||||| Sbjct: 146773 gaaactcatgagctcaagcag 146753
>emb|AL132793.24|HSDJ324B8 Human DNA sequence from clone RP3-324B8 on chromosome 6q12-13, complete sequence Length = 120535 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aaactcatgagctcaagcagt 127 ||||||||||||||||||||| Sbjct: 45564 aaactcatgagctcaagcagt 45584
>gb|AC002395.1| Homo sapiens 12 PAC RPCI1-315L5 (Roswell Park Cancer Institute Human PAC library) complete sequence Length = 155022 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aaactcatgagctcaagcagt 127 ||||||||||||||||||||| Sbjct: 100836 aaactcatgagctcaagcagt 100856
>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome Length = 150715 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 500 agctcctcgacgaggaccccgcgg 523 |||||||||||||||||| ||||| Sbjct: 138652 agctcctcgacgaggaccacgcgg 138629
>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome Length = 2427734 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ttttgagtcgttggaaagaa 181 |||||||||||||||||||| Sbjct: 769287 ttttgagtcgttggaaagaa 769306
>ref|XM_510247.1| PREDICTED: Pan troglodytes LOC453257 (LOC453257), mRNA Length = 4481 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 549 caagaggctggagctgtacc 568 |||||||||||||||||||| Sbjct: 3060 caagaggctggagctgtacc 3079
>ref|XM_520335.1| PREDICTED: Pan troglodytes similar to General transcription factor 3C polypeptide 5 (Transcription factor IIIC-epsilon subunit) (TF3C-epsilon) (TFIIIC 63 kDa subunit) (TFIIIC63) (LOC464820), mRNA Length = 2528 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 ccaagaggctggagctgtac 567 |||||||||||||||||||| Sbjct: 493 ccaagaggctggagctgtac 512
>gb|AY694189.1| Camellia sinensis phragmoplastin mRNA, partial cds Length = 434 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 ctcgaccatttctttactga 467 |||||||||||||||||||| Sbjct: 58 ctcgaccatttctttactga 77
>gb|AY881693.1| Baboon herpesvirus 2 strain 860 ICP22 (US1), US2 (US2), protein kinase (US3), glycoprotein G (US4), glycoprotein J (US5), glycoprotein D (US6), glycoprotein I (US7), glycoprotein E (US8), US8.5 (US8.5), US9 (US9), US10 (US10), tegument protein (US11), and ICP47 (US12) genes, complete cds Length = 15072 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 500 agctcctcgacgaggaccccgcgg 523 |||||||||||||||||| ||||| Sbjct: 9120 agctcctcgacgaggaccacgcgg 9097
>gb|BC017337.2| Homo sapiens general transcription factor IIIC, polypeptide 5, 63kDa, mRNA (cDNA clone MGC:29524 IMAGE:4872395), complete cds Length = 2397 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 ccaagaggctggagctgtac 567 |||||||||||||||||||| Sbjct: 430 ccaagaggctggagctgtac 449
>ref|NM_004667.3| Homo sapiens hect domain and RLD 2 (HERC2), mRNA Length = 15351 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 549 caagaggctggagctgtacc 568 |||||||||||||||||||| Sbjct: 3563 caagaggctggagctgtacc 3582
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 atcgacgcggttgcatggtc 605 |||||||||||||||||||| Sbjct: 3342483 atcgacgcggttgcatggtc 3342464
>ref|NM_012087.1| Homo sapiens general transcription factor IIIC, polypeptide 5, 63kDa (GTF3C5), mRNA Length = 2385 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 ccaagaggctggagctgtac 567 |||||||||||||||||||| Sbjct: 462 ccaagaggctggagctgtac 481
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 586 atcgacgcggttgcatggtc 605 |||||||||||||||||||| Sbjct: 2784179 atcgacgcggttgcatggtc 2784198
>gb|AC139572.4| Mus musculus BAC clone RP24-196P9 from chromosome 7, complete sequence Length = 165198 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ttgtcttgttagtatcagag 37 |||||||||||||||||||| Sbjct: 24309 ttgtcttgttagtatcagag 24290
>gb|AY163769.1| Homo sapiens excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing) (ERCC3) gene, complete cds Length = 38413 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 aaactcatgagctcaagcagttcc 130 |||||| ||||||||||||||||| Sbjct: 16742 aaactcctgagctcaagcagttcc 16765
>gb|AE014309.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 6 of 11 of the complete sequence Length = 250029 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 tgaaactcatgagctcaagc 124 |||||||||||||||||||| Sbjct: 127137 tgaaactcatgagctcaagc 127118
>gb|BC011355.1| Homo sapiens general transcription factor IIIC, polypeptide 5, 63kDa, mRNA (cDNA clone MGC:18246 IMAGE:4157684), complete cds Length = 2388 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 ccaagaggctggagctgtac 567 |||||||||||||||||||| Sbjct: 451 ccaagaggctggagctgtac 470
>gb|BC030157.2| Homo sapiens general transcription factor IIIC, polypeptide 5, 63kDa, mRNA (cDNA clone IMAGE:4561538), partial cds Length = 2099 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 ccaagaggctggagctgtac 567 |||||||||||||||||||| Sbjct: 165 ccaagaggctggagctgtac 184
>emb|BX936390.7| Zebrafish DNA sequence from clone DKEY-6E2 in linkage group 6, complete sequence Length = 168226 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 caactgttctggcatatgtt 366 |||||||||||||||||||| Sbjct: 41726 caactgttctggcatatgtt 41707
>emb|AL732366.7| Human DNA sequence from clone RP11-393H10 on chromosome X Contains a novel gene (FLJ14503), the EIF1A gene for eukaryotic translation initiation factor 1A (EIF4C, EIF1AX, eIF-1A, eIF-4C), the 3' end of the RPS6KA3 gene for ribosomal protein S6 kinase, 90kDa, polypeptide 3 (RSK, HU-2, HU-3, RSK2, MRX19, ISPK-1, MAPKAPK1B), a novel gene and three CpG islands, complete sequence Length = 187275 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 670 catctctcccctttgccaga 689 |||||||||||||||||||| Sbjct: 68788 catctctcccctttgccaga 68769
>emb|AL590434.16| Human DNA sequence from clone RP11-181E22 on chromosome 1 Contains the 3' end of the gene for a novel protein, a novel pseudogene, the SFPQ gene for splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated), the 5' end of the ZNF262 gene for zinc finger protein 262 and a CpG island, complete sequence Length = 185909 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 aactcatgagctcaagcagt 127 |||||||||||||||||||| Sbjct: 165908 aactcatgagctcaagcagt 165927
>emb|AL513170.16| Human DNA sequence from clone RP11-285B4 on chromosome 1, complete sequence Length = 96748 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 aatcctaaaggaactagtcc 91 |||||||||||||||||||| Sbjct: 24977 aatcctaaaggaactagtcc 24996
>emb|AL359643.27| Human DNA sequence from clone RP11-428J1 on chromosome 6 Contains the CDYL gene for a Y chromosome-like chromodomain protein, a ribosomal protein S18 (RPS18) pseudogene, the gene for ribonuclease P 40kD subunit (RPP40) and CpG islands, complete sequence Length = 166863 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 tagatttcttcaggaagctt 264 |||||||||||||||||||| Sbjct: 49810 tagatttcttcaggaagctt 49791
>emb|AL356376.9| Human DNA sequence from clone RP11-155N20 on chromosome 13, complete sequence Length = 143683 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 tgaaactcatgagctcaagc 124 |||||||||||||||||||| Sbjct: 23817 tgaaactcatgagctcaagc 23798
>emb|AL162417.23| Human DNA sequence from clone RP11-326L24 on chromosome 9q34.13-34.3 Contains the GTF3C5 gene for general transcription factor IIIC polypeptide 5 63kDa, the CEL gene for carboxyl ester lipase (bile salt-stimulated lipase), the CELP gene for carboxyl ester lipase pseudogene, the RALGDS gene for ral guanine nucleotide dissociation stimulator, the gene for Forssman glycolipid synthetase (FS), three novel genes and six CpG islands, complete sequence Length = 152863 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 ccaagaggctggagctgtac 567 |||||||||||||||||||| Sbjct: 20912 ccaagaggctggagctgtac 20931
>emb|AL138881.12| Human DNA sequence from clone RP11-528H16 on chromosome 6 Contains the 5' end of a putative novel gene, complete sequence Length = 38809 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 aactcatgagctcaagcagt 127 |||||||||||||||||||| Sbjct: 21339 aactcatgagctcaagcagt 21358
>emb|AL137220.8| Human DNA sequence from clone RP11-354I10 on chromosome 6 Contains a novel gene and a CpG island, complete sequence Length = 126482 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 agagagattaggcaactttc 497 |||||||||||||||||||| Sbjct: 11371 agagagattaggcaactttc 11352
>emb|BX569792.15| Zebrafish DNA sequence from clone CH211-197I17 in linkage group 16, complete sequence Length = 234579 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 caactgttctggcatatgtt 366 |||||||||||||||||||| Sbjct: 92777 caactgttctggcatatgtt 92796
>emb|BX950223.8| Zebrafish DNA sequence from clone CH211-29N12 in linkage group 5, complete sequence Length = 54944 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 caactgttctggcatatgtt 366 |||||||||||||||||||| Sbjct: 26756 caactgttctggcatatgtt 26737
>emb|BX571688.3| Zebrafish DNA sequence from clone DKEY-200H23, complete sequence Length = 181466 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 caactgttctggcatatgtt 366 |||||||||||||||||||| Sbjct: 2378 caactgttctggcatatgtt 2397
>dbj|AB232136.1| Cercopithecine herpesvirus 16 US6, US7, US8, US8.5, US9 genes for glycoprotein D, glycoprotein I, glycoprotein E, nucleolar phosphoprotein, tegument protein, complete cds, isolate:X313 Length = 5232 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 500 agctcctcgacgaggaccccgcgg 523 |||||||||||||||||| ||||| Sbjct: 1674 agctcctcgacgaggaccacgcgg 1651
>dbj|AB232135.1| Cercopithecine herpesvirus 16 US6, US7, US8, US8.5, US9 genes for glycoprotein D, glycoprotein I, glycoprotein E, nucleolar phosphoprotein, tegument protein, complete cds, isolate:OU2-5 Length = 5248 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 500 agctcctcgacgaggaccccgcgg 523 |||||||||||||||||| ||||| Sbjct: 1678 agctcctcgacgaggaccacgcgg 1655
>dbj|AB232134.1| Cercopithecine herpesvirus 16 US6, US7, US8, US8.5, US9 genes for glycoprotein D, glycoprotein I, glycoprotein E, nucleolar phosphoprotein, tegument protein, complete cds, isolate:OU1-76 Length = 5238 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 500 agctcctcgacgaggaccccgcgg 523 |||||||||||||||||| ||||| Sbjct: 1671 agctcctcgacgaggaccacgcgg 1648
>dbj|AB232132.1| Cercopithecine herpesvirus 16 US6, US7, US8, US8.5, US9 genes for glycoprotein D, glycoprotein I, glycoprotein E, nucleolar phosphoprotein, tegument protein, complete cds, isolate:A951 Length = 5227 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 500 agctcctcgacgaggaccccgcgg 523 |||||||||||||||||| ||||| Sbjct: 1677 agctcctcgacgaggaccacgcgg 1654
>dbj|AK055092.1| Homo sapiens cDNA FLJ30530 fis, clone BRAWH2001092, highly similar to Homo sapiens transcription factor IIIC63 mRNA Length = 2380 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 ccaagaggctggagctgtac 567 |||||||||||||||||||| Sbjct: 469 ccaagaggctggagctgtac 488
>gb|AC023283.10| Homo sapiens chromosome 10 clone RP11-539I5, complete sequence Length = 218074 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 gagagattaggcaactttcc 498 |||||||||||||||||||| Sbjct: 84732 gagagattaggcaactttcc 84751
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome Length = 230138 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 ggctggagctgtaccggagc 573 |||||||||||||||||||| Sbjct: 48619 ggctggagctgtaccggagc 48638
>gb|AF397994.1|AF397994 Cyprinodon nevadensis mionectes microsatellite AC1 sequence Length = 441 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 175 gaaagaatgagggacgaaagcaagaaga 202 |||||||||||||| ||||| ||||||| Sbjct: 366 gaaagaatgagggaggaaagaaagaaga 393
>gb|AF449714.1|AF449714 Cercopithecine herpesvirus 2 unique short region, partial sequence Length = 9811 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 500 agctcctcgacgaggaccccgcgg 523 |||||||||||||||||| ||||| Sbjct: 5603 agctcctcgacgaggaccacgcgg 5580
>gb|AC009682.7| Homo sapiens chromosome 8, clone RP11-72O13, complete sequence Length = 155428 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 108 aactcatgagctcaagcagttccc 131 |||||||| ||||||||||||||| Sbjct: 129937 aactcatgggctcaagcagttccc 129960
>gb|AC017091.8| Homo sapiens BAC clone RP11-506N2 from 4, complete sequence Length = 201536 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 665 ggtgacatctctcccctttg 684 |||||||||||||||||||| Sbjct: 39546 ggtgacatctctcccctttg 39527
>emb|BX571765.6| Zebrafish DNA sequence from clone DKEYP-77G7 in linkage group 23, complete sequence Length = 147933 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 caactgttctggcatatgtt 366 |||||||||||||||||||| Sbjct: 83913 caactgttctggcatatgtt 83894
>emb|BX088600.12| Zebrafish DNA sequence from clone DKEY-166M7 in linkage group 16, complete sequence Length = 192992 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 caactgttctggcatatgtt 366 |||||||||||||||||||| Sbjct: 120410 caactgttctggcatatgtt 120429
>emb|BX323090.7| Zebrafish DNA sequence from clone CH211-274B7 in linkage group 1, complete sequence Length = 166353 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 caactgttctggcatatgtt 366 |||||||||||||||||||| Sbjct: 104903 caactgttctggcatatgtt 104922
>emb|BX296541.5| Zebrafish DNA sequence from clone CH211-278P9, complete sequence Length = 157802 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 caactgttctggcatatgtt 366 |||||||||||||||||||| Sbjct: 5603 caactgttctggcatatgtt 5584
>emb|BX248521.12| Zebrafish DNA sequence from clone CH211-243C14 in linkage group 23, complete sequence Length = 144888 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 caactgttctggcatatgtt 366 |||||||||||||||||||| Sbjct: 79825 caactgttctggcatatgtt 79844
>emb|BX321872.10| Zebrafish DNA sequence from clone CH211-281K19 in linkage group 10, complete sequence Length = 78006 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 caactgttctggcatatgtt 366 |||||||||||||||||||| Sbjct: 64733 caactgttctggcatatgtt 64752
>gb|AC035144.3|AC035144 Homo sapiens chromosome 5 clone CTD-2220M12, complete sequence Length = 112626 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 aactcatgagctcaagcagt 127 |||||||||||||||||||| Sbjct: 36802 aactcatgagctcaagcagt 36821
>gb|AC023826.6| Homo sapiens chromosome 16 clone RP11-380E14, complete sequence Length = 196755 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 cgaccatttctttactgagc 469 |||||||||||||||||||| Sbjct: 55362 cgaccatttctttactgagc 55381
>gb|AC093391.5| Homo sapiens BAC clone RP11-798L22 from 2, complete sequence Length = 121496 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 tgaaactcatgagctcaagc 124 |||||||||||||||||||| Sbjct: 45427 tgaaactcatgagctcaagc 45408
>gb|AF443185.2| Paracoccidioides brasiliensis transcriptional repressor Sin3p (SIN3) gene, complete cds Length = 11093 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 667 tgacatctctcccctttgcc 686 |||||||||||||||||||| Sbjct: 2321 tgacatctctcccctttgcc 2340
>gb|AC008067.3| Homo sapiens BAC clone RP11-303I4 from 2, complete sequence Length = 151242 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 gaattgggacaactgttctg 357 |||||||||||||||||||| Sbjct: 111597 gaattgggacaactgttctg 111616
>gb|AC110926.5| Homo sapiens BAC clone RP11-313N8 from 2, complete sequence Length = 193648 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 aaactcatgagctcaagcagttcc 130 |||||| ||||||||||||||||| Sbjct: 150778 aaactcctgagctcaagcagttcc 150755
>gb|AC007597.3|AC007597 Homo sapiens chromosome 16 clone RP11-137H10, complete sequence Length = 192814 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 cgaccatttctttactgagc 469 |||||||||||||||||||| Sbjct: 19815 cgaccatttctttactgagc 19796
>gb|AC103725.5| Homo sapiens chromosome 8, clone RP11-598A18, complete sequence Length = 172945 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 108 aactcatgagctcaagcagttccc 131 |||||||| ||||||||||||||| Sbjct: 150564 aactcatgggctcaagcagttccc 150541
>gb|AY007123.1| Homo sapiens clone CDABP0017 mRNA sequence Length = 2079 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 ccaagaggctggagctgtac 567 |||||||||||||||||||| Sbjct: 171 ccaagaggctggagctgtac 190
>gb|AC126332.9| Homo sapiens chromosome 15, clone RP11-665A22, complete sequence Length = 161099 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 549 caagaggctggagctgtacc 568 |||||||||||||||||||| Sbjct: 95060 caagaggctggagctgtacc 95041
>gb|AC175464.1| Mus musculus BAC clone RP23-129E4 from chromosome 16, complete sequence Length = 224605 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gtagatttcttcaggaagct 263 |||||||||||||||||||| Sbjct: 16434 gtagatttcttcaggaagct 16453
>dbj|AK000194.1| Homo sapiens cDNA FLJ20187 fis, clone COLF0433 Length = 1927 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 ccaagaggctggagctgtac 567 |||||||||||||||||||| Sbjct: 182 ccaagaggctggagctgtac 201
>gb|AF071172.3|AF071172 Homo sapiens HERC2 (HERC2) mRNA, complete cds Length = 15304 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 549 caagaggctggagctgtacc 568 |||||||||||||||||||| Sbjct: 3518 caagaggctggagctgtacc 3537
>gb|AC005661.1|AC005661 citb_54_o_2, complete sequence Length = 84633 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 gagagattaggcaactttcc 498 |||||||||||||||||||| Sbjct: 1970 gagagattaggcaactttcc 1989
>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome Length = 156487 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 500 agctcctcgacgaggaccccgcgg 523 |||||||||||||||||| ||||| Sbjct: 143226 agctcctcgacgaggaccacgcgg 143203
>emb|AL844883.15| Zebrafish DNA sequence from clone DKEY-3J22 in linkage group 18, complete sequence Length = 189984 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 caactgttctggcatatgtt 366 |||||||||||||||||||| Sbjct: 55380 caactgttctggcatatgtt 55399
>emb|BX571970.20| Zebrafish DNA sequence from clone DKEY-276G11 in linkage group 7, complete sequence Length = 170614 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 caactgttctggcatatgtt 366 |||||||||||||||||||| Sbjct: 76681 caactgttctggcatatgtt 76700
>gb|AF133124.1|AF133124 Homo sapiens transcription factor IIIC63 mRNA, complete cds Length = 2385 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 ccaagaggctggagctgtac 567 |||||||||||||||||||| Sbjct: 462 ccaagaggctggagctgtac 481
>emb|AL133249.1|CNS01DUF BAC sequence from the SPG4 candidate region at 2p21-2p22 BAC 358K12 of library RPCI-11 from chromosome 2 of Homo sapiens (Human) Length = 168571 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 ggagcaagagagattaggca 491 |||||||||||||||||||| Sbjct: 34881 ggagcaagagagattaggca 34862
>emb|CT009557.4| Pan troglodytes chromosome X clone PTB-010G23 map Xq28, complete sequence Length = 244504 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 105 tgaaactcatgagctcaagcagttcccc 132 |||||||| |||||||||||||| |||| Sbjct: 160961 tgaaactcctgagctcaagcagtccccc 160988
>dbj|AP001561.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-732G1, complete sequences Length = 195800 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 107 aaactcatgagctcaagcagttccccac 134 |||||| ||| ||||||||||||||||| Sbjct: 114750 aaactcctgatctcaagcagttccccac 114723
>gb|AC005620.1|AC005620 Homo sapiens chromosome 19, cosmid R33590, complete sequence Length = 40351 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 aactcatgagctcaagcagt 127 |||||||||||||||||||| Sbjct: 3564 aactcatgagctcaagcagt 3583
>emb|AL954770.9| Zebrafish DNA sequence from clone CH211-193A15, complete sequence Length = 151426 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 caactgttctggcatatgtt 366 |||||||||||||||||||| Sbjct: 6958 caactgttctggcatatgtt 6939
>gb|AC004583.1|AC004583 Human Chromosome 15q11-q13 PAC clone pDJ778a2, complete sequence Length = 132493 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 549 caagaggctggagctgtacc 568 |||||||||||||||||||| Sbjct: 80806 caagaggctggagctgtacc 80825
>emb|AL929038.13| Zebrafish DNA sequence from clone DKEY-34D20 in linkage group 20, complete sequence Length = 213980 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 caactgttctggcatatgtt 366 |||||||||||||||||||| Sbjct: 113204 caactgttctggcatatgtt 113223
>emb|AL929514.7| Zebrafish DNA sequence from clone CH211-187D9, complete sequence Length = 174473 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 caactgttctggcatatgtt 366 |||||||||||||||||||| Sbjct: 103224 caactgttctggcatatgtt 103205
>gb|BC006409.1| Homo sapiens cDNA clone IMAGE:3534349, containing frame-shift errors Length = 2136 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 ccaagaggctggagctgtac 567 |||||||||||||||||||| Sbjct: 173 ccaagaggctggagctgtac 192
>gb|AC000394.1|AC000394 Genomic sequence from Human 9q34, complete sequence Length = 44294 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 ccaagaggctggagctgtac 567 |||||||||||||||||||| Sbjct: 24223 ccaagaggctggagctgtac 24242
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 490 caactttccaagctcctcga 509 |||||||||||||||||||| Sbjct: 3359442 caactttccaagctcctcga 3359423
>emb|AL808121.7| Zebrafish DNA sequence from clone CH211-251B22, complete sequence Length = 154450 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 caactgttctggcatatgtt 366 |||||||||||||||||||| Sbjct: 12846 caactgttctggcatatgtt 12827
>emb|AJ420443.1|HSA420443 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 1607066 Length = 2136 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 ccaagaggctggagctgtac 567 |||||||||||||||||||| Sbjct: 175 ccaagaggctggagctgtac 194
>gb|AC016586.9| Homo sapiens chromosome 19 clone CTD-2622I13, complete sequence Length = 205642 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 aactcatgagctcaagcagt 127 |||||||||||||||||||| Sbjct: 164475 aactcatgagctcaagcagt 164494 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,885,641 Number of Sequences: 3902068 Number of extensions: 6885641 Number of successful extensions: 167150 Number of sequences better than 10.0: 109 Number of HSP's better than 10.0 without gapping: 109 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 166713 Number of HSP's gapped (non-prelim): 425 length of query: 717 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 694 effective length of database: 17,143,297,704 effective search space: 11897448606576 effective search space used: 11897448606576 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)