ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags28p13 |
|---|---|
| Clone Library Name | barley_pub |
>SSB_RHOBA (P59932) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 169 Score = 58.9 bits (141), Expect = 3e-09 Identities = 45/123 (36%), Positives = 60/123 (48%), Gaps = 8/123 (6%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV--WKSATETTWV------TLAFWDDLAVV 164 N V L+G + DIELR LPSG +VA IAV + A++ WV + + A V Sbjct: 5 NRVMLMGNLTRDIELRYLPSGMAVAEFSIAVNEKRKASDGQWVEDVSFFEITLFGRTAEV 64 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIESFQPVRLYSESGXDGG 344 ASE++ +G IFV GRL DT ++ +KR E Q + ESG GG Sbjct: 65 ASEYLSKGSPIFVEGRLKQDTWEKDGQKRSKVKVIG-------ERMQMIGGRGESGGGGG 117 Query: 345 KYG 353 G Sbjct: 118 GGG 120
>SSB_BPP1 (Q9XJG4) Single-stranded DNA-binding protein (SSB-P1)| Length = 162 Score = 53.1 bits (126), Expect = 2e-07 Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 11/91 (12%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV---WK------SATETTWVTLAFWDDLAV 161 N V LIGT+G D E+R +P+G +V R IA W+ +T W + + LA Sbjct: 7 NKVILIGTLGQDPEIRYIPNGGAVGRLSIATNESWRDKQTGQQKEQTEWHKVVLFGKLAE 66 Query: 162 VASEHVKQGDRIFVSGRLVSD--TVDEGPEK 248 +ASE++++G ++++ G+L + T D G E+ Sbjct: 67 IASEYLRKGSQVYIEGKLKTRKWTDDAGVER 97
>SSB_RALSO (Q8Y2B4) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 178 Score = 52.4 bits (124), Expect = 3e-07 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 9/90 (10%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVW-----KSATE----TTWVTLAFWDDLAV 161 N V ++G +G D E R +PSG +V R+A K++ E T W +AF+ LA Sbjct: 5 NKVIIVGNLGADPETRYMPSGDAVTNIRVATTDRYKDKASGEMREATEWHRIAFFGRLAE 64 Query: 162 VASEHVKQGDRIFVSGRLVSDTVDEGPEKR 251 +A E++K+G +++V GRL + ++ +K+ Sbjct: 65 IAGEYLKKGSQVYVEGRLKTRQWEKDGQKQ 94
>SSB_WOLSU (P59933) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 162 Score = 50.8 bits (120), Expect = 8e-07 Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 9/125 (7%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV--------WKSATETTWVTLAFWDDLAVV 164 N V L+G + D+ELR LPSG+++A+ IA E +V + + A + Sbjct: 3 NKVILVGNLTRDVELRYLPSGSALAKIGIATNRRFKKQDGSQGDEVCFVDVNLFGRTAEI 62 Query: 165 ASEHVKQGDRIFVSGRLVSDT-VDEGPEKRXXXXXXXXXXFNFIESFQPVRLYSESGXDG 341 A++++K+G +I + GRLV ++ D+ +KR ES Q L S+ G Sbjct: 63 ANQYLKKGSKILIEGRLVLESWTDQSGQKRSKHSVTA-------ESLQ--MLDSKGASQG 113 Query: 342 GKYGE 356 G GE Sbjct: 114 GYEGE 118
>SSB_BORPA (P59928) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 162 Score = 50.1 bits (118), Expect = 1e-06 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV---WKSAT------ETTWVTLAFWDDLAV 161 N V L+G +G D E+R P GA++ IA WK ET W + ++ LA Sbjct: 5 NKVILVGNLGRDPEVRYSPDGAAICNVSIATTSQWKDKASGERREETEWHRVVMYNRLAE 64 Query: 162 VASEHVKQGDRIFVSGRL 215 +A E++K+G +++ GRL Sbjct: 65 IAGEYLKKGRSVYIEGRL 82
>SSB_SHEHA (P77953) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 226 Score = 50.1 bits (118), Expect = 1e-06 Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 8/77 (10%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV---WKSAT-----ETTWVTLAFWDDLAVV 164 N V L+G +G D E+R +P+G +VA +A WK T W + + LA + Sbjct: 7 NKVILVGNLGKDPEVRYMPNGNAVANFTVATSESWKDQQGQPQERTEWHNIVMYRRLAEI 66 Query: 165 ASEHVKQGDRIFVSGRL 215 A E++K+G +I++ G+L Sbjct: 67 AGEYLKKGSKIYIEGKL 83
>SSB_BORPE (P66846) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 166 Score = 50.1 bits (118), Expect = 1e-06 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV---WKSAT------ETTWVTLAFWDDLAV 161 N V L+G +G D E+R P GA++ IA WK ET W + ++ LA Sbjct: 5 NKVILVGNLGRDPEVRYSPDGAAICNVSIATTSQWKDKASGERREETEWHRVVMYNRLAE 64 Query: 162 VASEHVKQGDRIFVSGRL 215 +A E++K+G +++ GRL Sbjct: 65 IAGEYLKKGRSVYIEGRL 82
>SSB_BORBR (P66847) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 166 Score = 50.1 bits (118), Expect = 1e-06 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV---WKSAT------ETTWVTLAFWDDLAV 161 N V L+G +G D E+R P GA++ IA WK ET W + ++ LA Sbjct: 5 NKVILVGNLGRDPEVRYSPDGAAICNVSIATTSQWKDKASGERREETEWHRVVMYNRLAE 64 Query: 162 VASEHVKQGDRIFVSGRL 215 +A E++K+G +++ GRL Sbjct: 65 IAGEYLKKGRSVYIEGRL 82
>SSB_NITEU (Q82S98) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 149 Score = 50.1 bits (118), Expect = 1e-06 Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 8/77 (10%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIA---VWK-----SATETTWVTLAFWDDLAVV 164 N V LIG +G D E+R +PSG ++A IA WK T W + + A + Sbjct: 5 NKVMLIGNLGRDPEIRYMPSGDAMANLNIATTDTWKDKGGEKQERTEWHRVVMFGKQAEI 64 Query: 165 ASEHVKQGDRIFVSGRL 215 A E++K+G +I++ GRL Sbjct: 65 AGEYLKKGSQIYIEGRL 81
>SSB_VIBCH (Q9KUW2) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 177 Score = 49.7 bits (117), Expect = 2e-06 Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIA---VWKSAT------ETTWVTLAFWDDLAV 161 N V LIG +G D E+R +PSG +VA IA W+ +T W + + LA Sbjct: 7 NKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQKEKTEWHRVTLYGKLAE 66 Query: 162 VASEHVKQGDRIFVSGRL 215 VA E++++G ++++ G+L Sbjct: 67 VAGEYLRKGSQVYIEGQL 84
>SSB_VIBVU (Q8DCJ0) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 179 Score = 49.7 bits (117), Expect = 2e-06 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIA---VWKSAT------ETTWVTLAFWDDLAV 161 N V L+G +G D E+R +PSG +VA +A W+ +T W + + LA Sbjct: 7 NKVILVGNLGNDPEIRYMPSGGAVANITVATSETWRDKATGEPREKTEWHRVTLYGKLAE 66 Query: 162 VASEHVKQGDRIFVSGRL 215 VA E++++G ++++ G+L Sbjct: 67 VAGEYLRKGSQVYIEGQL 84
>SSB_HAEDU (P59930) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 176 Score = 49.3 bits (116), Expect = 2e-06 Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSATE---------TTWVTLAFWDDLAV 161 N V ++G +G D E+R +P+G +VA +A +S T+ T W + F+ A Sbjct: 5 NKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWTDKNTGERREVTEWHRIVFYRRQAE 64 Query: 162 VASEHVKQGDRIFVSGRL 215 VA +++++G +++V GRL Sbjct: 65 VAGQYLRKGSQVYVEGRL 82
>SSB_VIBPA (Q87LA3) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 176 Score = 48.9 bits (115), Expect = 3e-06 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV---WKSAT------ETTWVTLAFWDDLAV 161 N V L+G +G D E+R +P+G +VA IA W+ +T W + + LA Sbjct: 7 NKVILVGNLGNDPEIRYMPNGGAVANITIATSESWRDKATGEQREKTEWHRVVLFGKLAE 66 Query: 162 VASEHVKQGDRIFVSGRL 215 VA E++++G +++V G+L Sbjct: 67 VAGEYLRKGSQVYVEGQL 84
>SSB_THETH (O85824) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 266 Score = 48.9 bits (115), Expect = 3e-06 Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 4/77 (5%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVWK----SATETTWVTLAFWDDLAVVASEH 176 N V L+G + D ELR P G +VAR +AV + + T +V + W DLA A+E Sbjct: 129 NQVFLMGNLTRDPELRYTPQGTAVARLGLAVNERRQGAEERTHFVEVQAWRDLAEWAAE- 187 Query: 177 VKQGDRIFVSGRLVSDT 227 +++GD +FV GRLV+D+ Sbjct: 188 LRKGDGLFVIGRLVNDS 204
>SSB_SHIFL (P0AGE3) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 177 Score = 48.9 bits (115), Expect = 3e-06 Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV---WKSAT------ETTWVTLAFWDDLAV 161 N V L+G +G D E+R +P+G +VA +A W+ +T W + + LA Sbjct: 6 NKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAE 65 Query: 162 VASEHVKQGDRIFVSGRL 215 VASE++++G ++++ G+L Sbjct: 66 VASEYLRKGSQVYIEGQL 83
>SSB_ECOLI (P0AGE0) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 177 Score = 48.9 bits (115), Expect = 3e-06 Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV---WKSAT------ETTWVTLAFWDDLAV 161 N V L+G +G D E+R +P+G +VA +A W+ +T W + + LA Sbjct: 6 NKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAE 65 Query: 162 VASEHVKQGDRIFVSGRL 215 VASE++++G ++++ G+L Sbjct: 66 VASEYLRKGSQVYIEGQL 83
>SSB_ECOL6 (P0AGE1) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 177 Score = 48.9 bits (115), Expect = 3e-06 Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV---WKSAT------ETTWVTLAFWDDLAV 161 N V L+G +G D E+R +P+G +VA +A W+ +T W + + LA Sbjct: 6 NKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAE 65 Query: 162 VASEHVKQGDRIFVSGRL 215 VASE++++G ++++ G+L Sbjct: 66 VASEYLRKGSQVYIEGQL 83
>SSB_ECO57 (P0AGE2) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 177 Score = 48.9 bits (115), Expect = 3e-06 Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV---WKSAT------ETTWVTLAFWDDLAV 161 N V L+G +G D E+R +P+G +VA +A W+ +T W + + LA Sbjct: 6 NKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAE 65 Query: 162 VASEHVKQGDRIFVSGRL 215 VASE++++G ++++ G+L Sbjct: 66 VASEYLRKGSQVYIEGQL 83
>SSB_THET8 (Q5SLP9) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 263 Score = 48.9 bits (115), Expect = 3e-06 Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 4/77 (5%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVWK----SATETTWVTLAFWDDLAVVASEH 176 N V L+G + D ELR P G +VAR +AV + + T +V + W DLA A+E Sbjct: 129 NQVFLMGNLTRDPELRYTPQGTAVARLGLAVNERRQGAEERTHFVEVQAWRDLAEWAAE- 187 Query: 177 VKQGDRIFVSGRLVSDT 227 +++GD +FV GRLV+D+ Sbjct: 188 LRKGDGLFVIGRLVNDS 204
>SSB1_ANAVA (P0A4K1) Single-stranded DNA-binding protein 1 (SSB 1)| (Helix-destabilizing protein 1) Length = 119 Score = 48.5 bits (114), Expect = 4e-06 Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 2/75 (2%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSAT--ETTWVTLAFWDDLAVVASEHVK 182 N V L+G VGTD +++ SG+ R +AV + + + W TL WD A VA +V+ Sbjct: 4 NIVTLVGRVGTDPDIKYFESGSVKCRLTLAVNRRSKNDKPDWFTLELWDKTAEVAGNYVR 63 Query: 183 QGDRIFVSGRLVSDT 227 +G I V G L D+ Sbjct: 64 KGSLIGVKGSLKFDS 78
>SSB1_ANASP (P0A4K0) Single-stranded DNA-binding protein 1 (SSB 1)| (Helix-destabilizing protein 1) Length = 119 Score = 48.5 bits (114), Expect = 4e-06 Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 2/75 (2%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSAT--ETTWVTLAFWDDLAVVASEHVK 182 N V L+G VGTD +++ SG+ R +AV + + + W TL WD A VA +V+ Sbjct: 4 NIVTLVGRVGTDPDIKYFESGSVKCRLTLAVNRRSKNDKPDWFTLELWDKTAEVAGNYVR 63 Query: 183 QGDRIFVSGRLVSDT 227 +G I V G L D+ Sbjct: 64 KGSLIGVKGSLKFDS 78
>SSB_RALEU (P59927) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 188 Score = 48.5 bits (114), Expect = 4e-06 Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 11/80 (13%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV-----------WKSATETTWVTLAFWDDL 155 N V L+G +G D E+R +PSG +VA RIA K ATE W ++ + L Sbjct: 5 NKVILVGNLGADPEVRYMPSGDAVANLRIATTDRYKDKQSGEMKEATE--WHRVSMFGKL 62 Query: 156 AVVASEHVKQGDRIFVSGRL 215 A +A +++++G +++ GR+ Sbjct: 63 AEIAGQYLRKGSSVYIEGRI 82
>SSB_PASMU (Q9CJP4) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 166 Score = 48.5 bits (114), Expect = 4e-06 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSATE---------TTWVTLAFWDDLAV 161 N V ++G +G D E+R +P+G +VA +A +S + T W + F+ A Sbjct: 5 NKVIIVGNLGNDPEIRTMPNGEAVANISVATSESWIDKNTNERREVTEWHRIVFYRRQAE 64 Query: 162 VASEHVKQGDRIFVSGRL 215 VA E++++G +++V GRL Sbjct: 65 VAGEYLRKGSKVYVEGRL 82
>SSB_PROVU (Q8L2A6) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 195 Score = 48.1 bits (113), Expect = 5e-06 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIA---VWK------SATETTWVTLAFWDDLAV 161 N V L+G VG D E+R +P+G +VA +A W+ S +T W + + LA Sbjct: 7 NKVILVGNVGQDPEVRYMPNGGAVANLTLATSETWRDKQTGESKEKTEWHRVVLFGKLAE 66 Query: 162 VASEHVKQGDRIFVSGRL 215 + E VK+G +I++ G L Sbjct: 67 ITGEFVKKGSQIYIEGAL 84
>SSBR_ECOLI (P28045) Plasmid-derived single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 174 Score = 48.1 bits (113), Expect = 5e-06 Identities = 25/85 (29%), Positives = 49/85 (57%), Gaps = 9/85 (10%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVWKS---------ATETTWVTLAFWDDLAV 161 N V L+G +G D E+R +P+G +VA ++A +S +T W + + LA Sbjct: 6 NKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTEWHRVVLFGKLAE 65 Query: 162 VASEHVKQGDRIFVSGRLVSDTVDE 236 VA E++++G ++++ G+L + + D+ Sbjct: 66 VAGEYLRKGAQVYIEGQLRTRSWDD 90
>SSBP_ECOLI (P18022) Plasmid-derived single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 174 Score = 48.1 bits (113), Expect = 5e-06 Identities = 25/85 (29%), Positives = 49/85 (57%), Gaps = 9/85 (10%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVWKS---------ATETTWVTLAFWDDLAV 161 N V L+G +G D E+R +P+G +VA ++A +S +T W + + LA Sbjct: 6 NKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTEWHRVVLFGKLAE 65 Query: 162 VASEHVKQGDRIFVSGRLVSDTVDE 236 VA E++++G ++++ G+L + + D+ Sbjct: 66 VAGEYLRKGAQVYIEGQLRTRSWDD 90
>SSB_PROMI (P28046) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 173 Score = 48.1 bits (113), Expect = 5e-06 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVWKS---------ATETTWVTLAFWDDLAV 161 N V LIG +G D E+R +PSG +VA +A +S +T W + + LA Sbjct: 6 NKVILIGNLGQDPEIRYMPSGGAVANLTLATSESWRDKQTGEMKEKTEWHRVVIFGKLAE 65 Query: 162 VASEHVKQGDRIFVSGRL 215 +A E++++G ++++ G+L Sbjct: 66 IAGEYLRKGSQVYIEGQL 83
>SSB_SALTY (P0A2F6) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 175 Score = 48.1 bits (113), Expect = 5e-06 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVWKS---------ATETTWVTLAFWDDLAV 161 N V L+G +G D E+R +PSG +VA +A +S +T W + + LA Sbjct: 6 NKVILVGNLGQDPEVRYMPSGGAVANLTLATSESWRDKQTGEMKEQTEWHRVVMFGKLAE 65 Query: 162 VASEHVKQGDRIFVSGRL 215 VA E++++G ++++ G+L Sbjct: 66 VAGEYLRKGSQVYIEGQL 83
>SSB_SALTI (P0A2F7) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 175 Score = 48.1 bits (113), Expect = 5e-06 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVWKS---------ATETTWVTLAFWDDLAV 161 N V L+G +G D E+R +PSG +VA +A +S +T W + + LA Sbjct: 6 NKVILVGNLGQDPEVRYMPSGGAVANLTLATSESWRDKQTGEMKEQTEWHRVVMFGKLAE 65 Query: 162 VASEHVKQGDRIFVSGRL 215 VA E++++G ++++ G+L Sbjct: 66 VAGEYLRKGSQVYIEGQL 83
>SSB2_ECOLI (P28043) Plasmid-derived single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 178 Score = 47.8 bits (112), Expect = 7e-06 Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIA---VW------KSATETTWVTLAFWDDLAV 161 N V L+G +G D E+R +P+G +VA ++A W K +T W + + LA Sbjct: 6 NKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGKMREQTEWHRVVLFGKLAE 65 Query: 162 VASEHVKQGDRIFVSGRL 215 VA E++++G ++++ G+L Sbjct: 66 VAGEYLRKGAQVYIEGQL 83
>SSB_COXBU (Q83EP4) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 158 Score = 47.8 bits (112), Expect = 7e-06 Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV---WKSAT------ETTWVTLAFWDDLAV 161 N V LIG +G D E+R P+G +VA +A W+ T W +AF++ LA Sbjct: 6 NKVILIGNLGQDPEVRYTPNGNAVANVTLATSTTWRDKQTGELQERTEWHRIAFFNRLAE 65 Query: 162 VASEHVKQGDRIFVSGRL 215 + E++++G +I++ G L Sbjct: 66 IVGEYLRKGSKIYIEGSL 83
>SSB1_CHLTE (Q8KB47) Single-stranded DNA-binding protein 1 (SSB 1)| (Helix-destabilizing protein 1) Length = 162 Score = 47.4 bits (111), Expect = 9e-06 Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 8/84 (9%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSATE--------TTWVTLAFWDDLAVV 164 N V LIG +G D E R+ SG SV +A + + T W + W LA + Sbjct: 6 NKVMLIGHLGNDPERRETASGQSVVNFTLATSEGFKDSSGNLQERTEWHRIVAWGKLADI 65 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDE 236 S+++K+G ++++ GRL + + D+ Sbjct: 66 CSQYLKKGRQVYIEGRLQTRSWDD 89
>SSB7_ECOLI (P28044) Plasmid-derived single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 174 Score = 47.0 bits (110), Expect = 1e-05 Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVWKS---------ATETTWVTLAFWDDLAV 161 N V L+G +G D E+R +P+G +VA ++A +S +T W + + LA Sbjct: 6 NKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIREQTEWHRVVLFGKLAE 65 Query: 162 VASEHVKQGDRIFVSGRL 215 VA E++++G ++++ G+L Sbjct: 66 VAGEYLRKGAQVYIEGQL 83
>SSB_CAMJE (O69302) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 183 Score = 47.0 bits (110), Expect = 1e-05 Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 7/76 (9%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSAT-------ETTWVTLAFWDDLAVVA 167 N V L+G + DIE+R SG+++ IAV + T ET ++ ++F+ A VA Sbjct: 3 NKVVLVGNLTRDIEMRYAQSGSAIGASAIAVTRRFTANGEKREETCFIDISFYGRTAEVA 62 Query: 168 SEHVKQGDRIFVSGRL 215 ++++ +G ++ + GRL Sbjct: 63 NQYLTKGSKVLIEGRL 78
>SSB2_SALTY (Q93GP7) Single-stranded DNA-binding protein 2 (SSB 2)| (Helix-destabilizing protein 2) Length = 172 Score = 46.2 bits (108), Expect = 2e-05 Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIA---VWKSATE------TTWVTLAFWDDLAV 161 N V L+G +G D E+R +P+G +VA +A W+ + T W + + LA Sbjct: 7 NKVILVGHIGQDPEVRYMPNGGAVANLTLATSETWRVRQDGEMREHTEWHRVVVFGKLAE 66 Query: 162 VASEHVKQGDRIFVSGRL 215 +ASE++++G ++++ G+L Sbjct: 67 IASEYLRKGAQVYIEGQL 84
>SSB_PSEAE (P40947) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 164 Score = 46.2 bits (108), Expect = 2e-05 Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV---WK------SATETTWVTLAFWDDLAV 161 N V L+G VG D E R +P+G +V +A WK T W + F+ LA Sbjct: 5 NKVILVGNVGGDPETRYMPNGNAVTNITLATSESWKDKQTGQQQERTEWHRVVFFGRLAE 64 Query: 162 VASEHVKQGDRIFVSGRL 215 +A E++++G +++V G L Sbjct: 65 IAGEYLRKGSQVYVEGSL 82
>SSB_WIGBR (Q8D254) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 163 Score = 46.2 bits (108), Expect = 2e-05 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV---WK------SATETTWVTLAFWDDLAV 161 N V LIG +G D E+R +P+G ++ +A W+ S +T W + + LA Sbjct: 7 NKVILIGNLGQDPEVRYIPNGNAITNLSLATSENWRDKNTGESKEKTEWHRVILFGKLAE 66 Query: 162 VASEHVKQGDRIFVSGRL 215 VA E++K+G ++++ G L Sbjct: 67 VAGEYLKKGSQVYIEGNL 84
>SSB_SERMA (P25762) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 175 Score = 46.2 bits (108), Expect = 2e-05 Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV---WKSAT------ETTWVTLAFWDDLAV 161 N V L+G +G D E+R +P+G +VA +A W+ +T W + + LA Sbjct: 6 NKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEQKEKTEWHRVVLFGKLAE 65 Query: 162 VASEHVKQGDRIFVSGRL 215 VA E++++G ++++ G L Sbjct: 66 VAGEYLRKGSQVYIEGSL 83
>SSB2_SALTI (Q9RHF4) Single-stranded DNA-binding protein 2 (SSB 2)| (Helix-destabilizing protein 2) Length = 178 Score = 45.8 bits (107), Expect = 3e-05 Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSATE---------TTWVTLAFWDDLAV 161 N V L+G +G D E+R +P+G +V +A + T+ T W + + LA Sbjct: 7 NKVILVGNLGQDPEVRYMPNGGAVVNLSLATSDTWTDKQTGDKKERTEWHRVVLYGKLAE 66 Query: 162 VASEHVKQGDRIFVSGRL 215 +ASE++++G ++++ G L Sbjct: 67 IASEYLRKGSQVYIEGAL 84
>SSB_YERPE (Q8ZJ06) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 182 Score = 45.8 bits (107), Expect = 3e-05 Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV---WK------SATETTWVTLAFWDDLAV 161 N V L+G +G D E+R +P+G +VA +A W+ +T W + + LA Sbjct: 7 NKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTEWHRVVLFGKLAE 66 Query: 162 VASEHVKQGDRIFVSGRL 215 VA E++++G ++++ G L Sbjct: 67 VAGEYLRKGSQVYIEGAL 84
>SSB_PSESM (Q889U1) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 189 Score = 45.8 bits (107), Expect = 3e-05 Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSATE---------TTWVTLAFWDDLAV 161 N V L+GT G D E+R LP+G +V +A + T+ T W ++ + +A Sbjct: 6 NKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVEKTEWHRVSMFGKVAE 65 Query: 162 VASEHVKQGDRIFVSGRL 215 +A E++++G ++++ G+L Sbjct: 66 IAGEYLRKGSQVYIEGKL 83
>SSB_BUCBP (Q89A53) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 166 Score = 45.8 bits (107), Expect = 3e-05 Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV---WKSAT------ETTWVTLAFWDDLAV 161 N V LIG +G D ++R + +G++V +A WK +T W + F++ LA Sbjct: 7 NKVILIGYLGQDPDVRYMQNGSAVTNITLATSETWKDKNNGEIKEKTEWHRIVFFNKLAE 66 Query: 162 VASEHVKQGDRIFVSGRL 215 +A E++K+G ++++ G L Sbjct: 67 IAGEYLKKGSQVYIEGSL 84
>SSB_HAEIN (P44409) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 168 Score = 45.4 bits (106), Expect = 3e-05 Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSATE---------TTWVTLAFWDDLAV 161 N V ++G +G D E+R +P+G +VA +A +S + T W + F+ A Sbjct: 5 NKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERREVTEWHRIVFYRRQAE 64 Query: 162 VASEHVKQGDRIFVSGRL 215 + E++++G +++V GRL Sbjct: 65 ICGEYLRKGSQVYVEGRL 82
>SSB_SHEON (Q8EA81) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 238 Score = 45.1 bits (105), Expect = 4e-05 Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 8/77 (10%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV---WK-----SATETTWVTLAFWDDLAVV 164 N V L+G +G D E+R +P+G +VA +A WK T W + + LA + Sbjct: 7 NKVILVGNLGQDPEVRYMPNGNAVANITVATSESWKDQQGQQQERTEWHRVVLFGKLAEI 66 Query: 165 ASEHVKQGDRIFVSGRL 215 E++++G ++++ G+L Sbjct: 67 TGEYLRKGSQVYLEGKL 83
>SSB_BUCAP (Q8K933) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 162 Score = 45.1 bits (105), Expect = 4e-05 Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV---WK------SATETTWVTLAFWDDLAV 161 N V LIG +G D E+R +P+G +V +A WK + +T W + + LA Sbjct: 7 NKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGENKEKTEWHRIVLFGKLAE 66 Query: 162 VASEHVKQGDRIFVSGRL 215 +A E++++G ++++ G L Sbjct: 67 IAGEYLRKGSQVYIEGSL 84
>SSB_BRUSU (Q8G0J1) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 168 Score = 45.1 bits (105), Expect = 4e-05 Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 10/79 (12%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVWKS---------ATETTWVTLA-FWDDLA 158 N V L+G +G D E+R+L SG VA RIA +S T W ++ F ++LA Sbjct: 6 NKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTEWHSVVIFNENLA 65 Query: 159 VVASEHVKQGDRIFVSGRL 215 VA +++K+G ++++ G L Sbjct: 66 KVAEQYLKKGAKVYIEGAL 84
>SSB_BRUME (Q8YHC2) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 168 Score = 45.1 bits (105), Expect = 4e-05 Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 10/79 (12%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVWKS---------ATETTWVTLA-FWDDLA 158 N V L+G +G D E+R+L SG VA RIA +S T W ++ F ++LA Sbjct: 6 NKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTEWHSVVIFNENLA 65 Query: 159 VVASEHVKQGDRIFVSGRL 215 VA +++K+G ++++ G L Sbjct: 66 KVAEQYLKKGAKVYIEGAL 84
>SSB_BRUAB (P0C118) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 168 Score = 45.1 bits (105), Expect = 4e-05 Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 10/79 (12%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVWKS---------ATETTWVTLA-FWDDLA 158 N V L+G +G D E+R+L SG VA RIA +S T W ++ F ++LA Sbjct: 6 NKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTEWHSVVIFNENLA 65 Query: 159 VVASEHVKQGDRIFVSGRL 215 VA +++K+G ++++ G L Sbjct: 66 KVAEQYLKKGAKVYIEGAL 84
>SSB_BRUA2 (Q2YPX7) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 168 Score = 45.1 bits (105), Expect = 4e-05 Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 10/79 (12%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVWKS---------ATETTWVTLA-FWDDLA 158 N V L+G +G D E+R+L SG VA RIA +S T W ++ F ++LA Sbjct: 6 NKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTEWHSVVIFNENLA 65 Query: 159 VVASEHVKQGDRIFVSGRL 215 VA +++K+G ++++ G L Sbjct: 66 KVAEQYLKKGAKVYIEGAL 84
>SSBF_ECOLI (P18310) Plasmid-derived single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 178 Score = 45.1 bits (105), Expect = 4e-05 Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVWKS---------ATETTWVTLAFWDDLAV 161 N V L+G +G D E+R +P+G +VA ++A +S +T W + + LA Sbjct: 6 NKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTEWHRVVLFGKLAE 65 Query: 162 VASEHVKQGDRIFVSGRL 215 VA E +++G ++++ G+L Sbjct: 66 VAGECLRKGAQVYIEGQL 83
>SSB_BUCAI (P57610) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 171 Score = 45.1 bits (105), Expect = 4e-05 Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV---WK------SATETTWVTLAFWDDLAV 161 N V LIG +G D E+R +P+G +V +A WK + +T W + + LA Sbjct: 7 NKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGENKEKTEWHRIVLFGKLAE 66 Query: 162 VASEHVKQGDRIFVSGRL 215 +A E++++G ++++ G L Sbjct: 67 IAGEYLRKGSQVYIEGSL 84
>SSB_NEIMB (P66849) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 174 Score = 44.7 bits (104), Expect = 6e-05 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 8/79 (10%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV---WKSAT-----ETTWVTLAFWDDLAVV 164 N V LIG +G D E+R +P+G +V +A W T W + + LA + Sbjct: 4 NKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQRVERTEWHNITMYRKLAEI 63 Query: 165 ASEHVKQGDRIFVSGRLVS 221 A +++K+G +++ GR+ S Sbjct: 64 AGQYLKKGGLVYLEGRIQS 82
>SSB_NEIMA (P66848) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 174 Score = 44.7 bits (104), Expect = 6e-05 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 8/79 (10%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV---WKSAT-----ETTWVTLAFWDDLAVV 164 N V LIG +G D E+R +P+G +V +A W T W + + LA + Sbjct: 4 NKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQRVERTEWHNITMYRKLAEI 63 Query: 165 ASEHVKQGDRIFVSGRLVS 221 A +++K+G +++ GR+ S Sbjct: 64 AGQYLKKGGLVYLEGRIQS 82
>SSBW_PSEPU (Q8VMM4) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 180 Score = 44.3 bits (103), Expect = 7e-05 Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSATE---------TTWVTLAFWDDLAV 161 N V L+GT G D E+R LP+G +V +A + T+ T W ++ + +A Sbjct: 6 NKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVERTEWHRVSLFGKVAE 65 Query: 162 VASEHVKQGDRIFVSGRL 215 +A E++++G + ++ G+L Sbjct: 66 IAGEYLRKGSQCYIEGKL 83
>SSB_CORGL (Q8NLG0) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 225 Score = 44.3 bits (103), Expect = 7e-05 Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 13/127 (10%) Frame = +3 Query: 12 SVRLIGTVGTDIELRQLPSGASVARGRIA-----------VWKSATETTWVTLAFWDDLA 158 ++ ++G + D ELR PSGA+VA RIA W+ E ++T+ W A Sbjct: 7 NITVVGNIVADPELRFTPSGAAVANFRIASTPRSFNRQTNQWEDG-EALFLTVNVWRQAA 65 Query: 159 VVASEHVKQGDRIFVSGRLVSDTVD--EGPEKRXXXXXXXXXXFNFIESFQPVRLYSESG 332 +E + +G R+ V+GRL + + EG ++ + + V+ G Sbjct: 66 ENVAESLSKGMRVIVTGRLKQRSYETREGEKRSVFEVEADEVGPSLTFAKADVQRTPRGG 125 Query: 333 XDGGKYG 353 GG YG Sbjct: 126 NSGGNYG 132
>SSB_PSEPK (Q88QK5) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 181 Score = 44.3 bits (103), Expect = 7e-05 Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSATE---------TTWVTLAFWDDLAV 161 N V L+GT G D E+R LP+G +V +A + T+ T W ++ + +A Sbjct: 6 NKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVERTEWHRVSLFGKVAE 65 Query: 162 VASEHVKQGDRIFVSGRL 215 +A E++++G + ++ G+L Sbjct: 66 IAGEYLRKGSQCYIEGKL 83
>SSB_RHILO (Q98M41) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 172 Score = 43.9 bits (102), Expect = 1e-04 Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 10/79 (12%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV---WKSAT------ETTWVTLAFWDD-LA 158 N V L+G +G D E+R+L SG V RIA W+ +T W + +++ +A Sbjct: 6 NKVILVGNLGADPEIRRLNSGEPVVNIRIATSESWRDKNSGERKEKTEWHNVVIFNEGIA 65 Query: 159 VVASEHVKQGDRIFVSGRL 215 VA +++K+G +++V G+L Sbjct: 66 KVAEQYLKKGMKVYVEGQL 84
>SSB_UREPA (Q9PPT7) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 166 Score = 43.9 bits (102), Expect = 1e-04 Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 2/73 (2%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSA--TETTWVTLAFWDDLAVVASEHVK 182 N V LIG + D E RQ+PSG V IAV + ++ W++ A + ++K Sbjct: 2 NKVILIGNLVRDPEARQIPSGRLVTNFTIAVNDNTPNANANFIRCVAWNNQANFLTTYLK 61 Query: 183 QGDRIFVSGRLVS 221 +GD I + GR+VS Sbjct: 62 KGDAIAIEGRIVS 74
>SSB_CAUCR (Q9A894) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 167 Score = 43.9 bits (102), Expect = 1e-04 Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 12/92 (13%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIA---VWKSAT------ETTW-VTLAFWDDLA 158 N V L+G +G D E+R L SG VA RIA W+ + +T W + F D+L Sbjct: 6 NKVILVGNLGADPEIRSLGSGDRVANLRIATSETWRDRSSGERKEKTEWHRVVIFNDNLV 65 Query: 159 VVASEHVKQGDRIFVSGRLVSD--TVDEGPEK 248 VA +++++G +++ G L + T + G EK Sbjct: 66 KVAEQYLRKGSTVYIEGALQTRKWTDNTGQEK 97
>SSB_RHIME (P56898) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 174 Score = 43.5 bits (101), Expect = 1e-04 Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 10/79 (12%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIA---VWKSAT------ETTWVT-LAFWDDLA 158 N V LIG VG D E+R+ G +A RIA W+ +T W T + F + L Sbjct: 6 NKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTEWHTVVVFNEGLC 65 Query: 159 VVASEHVKQGDRIFVSGRL 215 V ++VK+G ++++ G+L Sbjct: 66 KVVEQYVKKGAKLYIEGQL 84
>SSB_ARTAU (Q8KSB6) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 171 Score = 43.5 bits (101), Expect = 1e-04 Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 13/93 (13%) Frame = +3 Query: 12 SVRLIGTVGTDIELRQLPSGASVARGRIA-----------VWKSATETTWVTLAFWDDLA 158 ++ +IG + +D ELR PSG++VA IA WK ET ++ + W + A Sbjct: 6 TITVIGNLTSDPELRFTPSGSAVANFTIASTPRTFDRQSNEWKDG-ETLFLRASVWREAA 64 Query: 159 VVASEHVKQGDRIFVSGRLVSDTVD--EGPEKR 251 +E + +G R+ VSGRL S + + EG EKR Sbjct: 65 ENVAESLTKGTRVIVSGRLKSRSYETKEG-EKR 96
>SSB_AGRT5 (Q8UF87) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 173 Score = 43.5 bits (101), Expect = 1e-04 Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 10/79 (12%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIA---VWKSAT------ETTWVT-LAFWDDLA 158 N V LIG VG D E+R+ G +A RIA W+ +T W T + F + L Sbjct: 6 NKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERKEKTEWHTVVVFNEGLC 65 Query: 159 VVASEHVKQGDRIFVSGRL 215 V ++VK+G ++++ G+L Sbjct: 66 KVVEQYVKKGAKLYIEGQL 84
>SSB_STRR6 (P66855) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 156 Score = 43.5 bits (101), Expect = 1e-04 Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 6/122 (4%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAV---WKSAT---ETTWVTLAFWDDLAVV 164 + N+V L+G + D ELR PS +VA +AV +KS E ++ + W A Sbjct: 1 MINNVVLVGRMTRDAELRYTPSNVAVATFTLAVNRTFKSQNGEREADFINVVMWRQQAEN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIESFQPVRLYSESGXDGG 344 + K+G I V+GR+ + + D +R F +ES + VR G GG Sbjct: 61 LANWAKKGSLIGVTGRIQTRSYDNQQGQRVYVTEVVAENFQMLES-RSVR----EGHTGG 115 Query: 345 KY 350 Y Sbjct: 116 AY 117
>SSB_STRPN (P66854) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 156 Score = 43.5 bits (101), Expect = 1e-04 Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 6/122 (4%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAV---WKSAT---ETTWVTLAFWDDLAVV 164 + N+V L+G + D ELR PS +VA +AV +KS E ++ + W A Sbjct: 1 MINNVVLVGRMTRDAELRYTPSNVAVATFTLAVNRTFKSQNGEREADFINVVMWRQQAEN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIESFQPVRLYSESGXDGG 344 + K+G I V+GR+ + + D +R F +ES + VR G GG Sbjct: 61 LANWAKKGSLIGVTGRIQTRSYDNQQGQRVYVTEVVAENFQMLES-RSVR----EGHTGG 115 Query: 345 KY 350 Y Sbjct: 116 AY 117
>SSB_RHOS4 (Q9ZAQ8) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 173 Score = 43.1 bits (100), Expect = 2e-04 Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 10/79 (12%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV---WKSAT------ETTWVTLAFWDD-LA 158 N V +IG +G D E+R +G V RIA W+ T W ++A +D+ LA Sbjct: 6 NKVIIIGNLGRDPEVRSFQNGGKVVNLRIATSEQWRDRASGERKERTEWHSVAIFDENLA 65 Query: 159 VVASEHVKQGDRIFVSGRL 215 VA +++++G +++ G+L Sbjct: 66 RVAEQYLRKGSTVYIEGQL 84
>SSB1_STRAW (Q82FG5) Single-stranded DNA-binding protein 1 (SSB 1)| (Helix-destabilizing protein 1) Length = 202 Score = 42.7 bits (99), Expect = 2e-04 Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 11/78 (14%) Frame = +3 Query: 15 VRLIGTVGTDIELRQLPSGASVARGRIA-----------VWKSATETTWVTLAFWDDLAV 161 + ++G + D ELR PSGA+VA+ R+A WK E+ ++T + W A Sbjct: 7 ITVVGNLVDDPELRFTPSGAAVAKFRVASTPRTFDRQTNEWKDG-ESLFLTCSVWRQAAE 65 Query: 162 VASEHVKQGDRIFVSGRL 215 +E +++G R+ V GRL Sbjct: 66 NVAESLQRGMRVIVQGRL 83
>SSB2_STRCO (Q9X8U3) Single-stranded DNA-binding protein 2 (SSB 2)| (Helix-destabilizing protein 2) Length = 199 Score = 42.7 bits (99), Expect = 2e-04 Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 11/78 (14%) Frame = +3 Query: 15 VRLIGTVGTDIELRQLPSGASVARGRIA-----------VWKSATETTWVTLAFWDDLAV 161 + ++G + D ELR PSGA+VA+ R+A WK E+ ++T + W A Sbjct: 7 ITVVGNLVDDPELRFTPSGAAVAKFRVASTPRTFDRQTNEWKDG-ESLFLTCSVWRQAAE 65 Query: 162 VASEHVKQGDRIFVSGRL 215 +E +++G R+ V GRL Sbjct: 66 NVAESLQRGMRVIVQGRL 83
>SSB_THEAQ (Q9KH06) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 264 Score = 42.4 bits (98), Expect = 3e-04 Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 5/78 (6%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV-----WKSATETTWVTLAFWDDLAVVASE 173 N V L+G + D +LR P G +V R +AV + T ++ + W +LA ASE Sbjct: 129 NQVILMGNLTRDPDLRYTPQGTAVVRLGLAVNERRRGQEEERTHFLEVQAWRELAEWASE 188 Query: 174 HVKQGDRIFVSGRLVSDT 227 +++GD + V GRLV+D+ Sbjct: 189 -LRKGDGLLVIGRLVNDS 205
>SSB_SYNY3 (Q55499) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 121 Score = 42.0 bits (97), Expect = 4e-04 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 4/76 (5%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSATE----TTWVTLAFWDDLAVVASEH 176 NS+ L+G G D E++ SG V +AV + ++ W L W A +A + Sbjct: 4 NSIHLVGRAGRDPEVKYFESGNVVCNFTLAVNRRTSKKDEPPDWFDLEIWGKTAEIAGNY 63 Query: 177 VKQGDRIFVSGRLVSD 224 VK+G I + G L D Sbjct: 64 VKKGSLIGIQGSLKFD 79
>SSB1_XYLFA (Q9PHE7) Single-stranded DNA-binding protein 1 (SSB 1)| (Helix-destabilizing protein 1) Length = 136 Score = 42.0 bits (97), Expect = 4e-04 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 9/80 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV---WKSAT------ETTWVTLAFWDDLAV 161 N ++LIG +G D ++R + G +A WK +T W + F+ LA Sbjct: 5 NKMQLIGNLGADPDIRYMQDGTPTVTVSVATTDTWKDKDTGNKEEKTEWHRVVFFGGLAE 64 Query: 162 VASEHVKQGDRIFVSGRLVS 221 + E +K+G +I+V G L S Sbjct: 65 IVGEFLKKGSQIYVEGALRS 84
>SSB2_LISIN (Q92FK7) Single-stranded DNA-binding protein 2 (SSB 2)| (Helix-destabilizing protein 2) Length = 159 Score = 41.6 bits (96), Expect = 5e-04 Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 6/104 (5%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSAT------ETTWVTLAFWDDLAVV 164 + N V L+G + D +LR P+GA+VA +AV ++ T E ++ W A Sbjct: 1 MMNRVVLVGRLTKDPDLRYTPAGAAVATFTLAVNRTFTNQQGEREADFIQCVVWRKPAEN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIE 296 A+ +K+G V GR+ + ++ KR F+E Sbjct: 61 AANFLKKGSMAGVDGRIQTRNYEDSDGKRVFVTEVVAESVQFLE 104
>SSB_MYCSM (Q9AFI5) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 165 Score = 41.6 bits (96), Expect = 5e-04 Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 13/127 (10%) Frame = +3 Query: 12 SVRLIGTVGTDIELRQLPSGASVARGRIA-----------VWKSATETTWVTLAFWDDLA 158 ++ ++G + D ELR PSGA+VA +A WK E ++ W + A Sbjct: 6 TITVVGNLTADPELRFTPSGAAVANFTVASTPRMFDRQSGEWKDG-EALFLRCNIWREAA 64 Query: 159 VVASEHVKQGDRIFVSGRLVSDTVD--EGPEKRXXXXXXXXXXFNFIESFQPVRLYSESG 332 +E + +G R+ V+GRL + + EG ++ + + V S SG Sbjct: 65 ENVAESLTRGSRVIVTGRLKQRSFETREGEKRTVVEVEVDEIGPSLRYATAKVNKASRSG 124 Query: 333 XDGGKYG 353 GG +G Sbjct: 125 GGGGGFG 131
>SSB_XANCP (Q8P778) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 172 Score = 41.2 bits (95), Expect = 6e-04 Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 10/90 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV--------WKSATETTWVTLAFWDDLAVV 164 N V L+G +G D + + +G ++ R +A + T W + F+ L + Sbjct: 6 NKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDREGNNQERTEWHRVVFFGKLGEI 65 Query: 165 ASEHVKQGDRIFVSGRLVSD--TVDEGPEK 248 A E++++G +++V G L D T +G EK Sbjct: 66 AGEYLRKGSQVYVEGELRYDKYTGQDGVEK 95
>SSB_XANAC (Q8PIJ2) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 180 Score = 41.2 bits (95), Expect = 6e-04 Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 10/90 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV--------WKSATETTWVTLAFWDDLAVV 164 N V L+G +G D + + +G ++ R +A + T W + F+ L + Sbjct: 6 NKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDRDGNNQERTEWHRVVFFGKLGEI 65 Query: 165 ASEHVKQGDRIFVSGRLVSD--TVDEGPEK 248 A E++++G +++V G L D T +G EK Sbjct: 66 AGEYLRKGSQVYVEGELRYDKYTGQDGVEK 95
>SSBD_PSEPU (Q847G1) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 161 Score = 40.8 bits (94), Expect = 8e-04 Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 9/78 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSATE---------TTWVTLAFWDDLAV 161 N V LIGT G D E+R LP+G +V +A + T+ T ++ + +A Sbjct: 6 NKVILIGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTERHRVSLFGKVAE 65 Query: 162 VASEHVKQGDRIFVSGRL 215 +A E++++G ++++ G+L Sbjct: 66 IAGEYLRKGSQVYIEGKL 83
>SSB_BACHD (Q9K5N9) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 168 Score = 40.8 bits (94), Expect = 8e-04 Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 6/123 (4%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAV------WKSATETTWVTLAFWDDLAVV 164 + N V L+G + D ELR P+G +VA +AV + E ++ W A Sbjct: 1 MLNRVVLVGRLTRDPELRYTPNGVAVANFTLAVNRPFSNQQGEREADFINCVVWRKQAEN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIESFQPVRLYSESGXDGG 344 + ++K+G V GR+ + + D +R F+E P S+ G + Sbjct: 61 VANYLKKGSLAGVDGRIQTRSYDNNEGRRVFVTEVMAESVQFLE---PRGSQSQGGSNVD 117 Query: 345 KYG 353 +G Sbjct: 118 NFG 120
>SSB_HELHP (P59931) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 170 Score = 40.8 bits (94), Expect = 8e-04 Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 8/77 (10%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVA--------RGRIAVWKSATETTWVTLAFWDDLAVV 164 N V +IG + D+ELR LPSG+++A R + E ++ + + A V Sbjct: 3 NKVIIIGNLTRDVELRYLPSGSALATIGLASNRRFKKQDGSQGEEVCFIDVKLFGRSAEV 62 Query: 165 ASEHVKQGDRIFVSGRL 215 A++++++G +I + GRL Sbjct: 63 ANQYLRKGSKILIEGRL 79
>SSB3_STRA5 (Q8E0Z9) Single-stranded DNA-binding protein 3 (SSB 3)| (Helix-destabilizing protein 3) Length = 138 Score = 40.4 bits (93), Expect = 0.001 Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 6/122 (4%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAVWKS------ATETTWVTLAFWDDLAVV 164 + N++ L+G + D ELR PS +VA +AV ++ E ++ W A Sbjct: 1 MINNIVLVGRMTKDAELRYTPSNQAVATFSLAVNRNFKNQSGEREADFINCVIWRQQAEN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIESFQPVRLYSESGXDGG 344 + K+G + ++GR+ + + +R F +ES + ++SG Sbjct: 61 LANWAKKGALVGITGRIQTRNYENQQGQRIYVTEVVAENFQLLESRNSQQQTNQSGNSSN 120 Query: 345 KY 350 Y Sbjct: 121 SY 122
>SSB_BACSU (P37455) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 172 Score = 40.0 bits (92), Expect = 0.001 Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 10/126 (7%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSAT------ETTWVTLAFWDDLAVV 164 + N V L+G + D ELR P+GA+VA +AV ++ T E ++ W A Sbjct: 1 MLNRVVLVGRLTKDPELRYTPNGAAVATFTLAVNRTFTNQSGEREADFINCVTWRRQAEN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIE----SFQPVRLYSESG 332 + +K+G V GRL + + +R F+E Y+E Sbjct: 61 VANFLKKGSLAGVDGRLQTRNYENQQGQRVFVTEVQAESVQFLEPKNGGGSGSGGYNEGN 120 Query: 333 XDGGKY 350 GG+Y Sbjct: 121 SGGGQY 126
>SSB_LEPIN (Q8F052) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 117 Score = 40.0 bits (92), Expect = 0.001 Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 7/75 (9%) Frame = +3 Query: 21 LIGTVGTDIELRQLPSGASVARGRIAV---WKSATE----TTWVTLAFWDDLAVVASEHV 179 L G + +D E++ L SG SVA +AV +KS E ++V + WD AV A E++ Sbjct: 9 LDGNLTSDPEIKTLNSGKSVATFTLAVNHDYKSTLEEPGEVSFVEIELWDRQAVNAHEYL 68 Query: 180 KQGDRIFVSGRLVSD 224 K+G + V G L D Sbjct: 69 KKGKKATVIGELRQD 83
>SSB_LEPIC (Q72UU3) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 117 Score = 40.0 bits (92), Expect = 0.001 Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 7/75 (9%) Frame = +3 Query: 21 LIGTVGTDIELRQLPSGASVARGRIAV---WKSATE----TTWVTLAFWDDLAVVASEHV 179 L G + +D E++ L SG SVA +AV +KS E ++V + WD AV A E++ Sbjct: 9 LDGNLTSDPEIKTLNSGKSVATFTLAVNHDYKSTLEEPGEVSFVEIELWDRQAVNAHEYL 68 Query: 180 KQGDRIFVSGRLVSD 224 K+G + V G L D Sbjct: 69 KKGKKATVIGELRQD 83
>SSB_MYCTU (P0A610) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 164 Score = 39.7 bits (91), Expect = 0.002 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 11/79 (13%) Frame = +3 Query: 12 SVRLIGTVGTDIELRQLPSGASVARGRIA-----------VWKSATETTWVTLAFWDDLA 158 ++ ++G + D ELR PSGA+VA +A WK E ++ W + A Sbjct: 6 TITIVGNLTADPELRFTPSGAAVANFTVASTPRIYDRQTGEWKDG-EALFLRCNIWREAA 64 Query: 159 VVASEHVKQGDRIFVSGRL 215 +E + +G R+ VSGRL Sbjct: 65 ENVAESLTRGARVIVSGRL 83
>SSB_MYCBO (P0A611) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 164 Score = 39.7 bits (91), Expect = 0.002 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 11/79 (13%) Frame = +3 Query: 12 SVRLIGTVGTDIELRQLPSGASVARGRIA-----------VWKSATETTWVTLAFWDDLA 158 ++ ++G + D ELR PSGA+VA +A WK E ++ W + A Sbjct: 6 TITIVGNLTADPELRFTPSGAAVANFTVASTPRIYDRQTGEWKDG-EALFLRCNIWREAA 64 Query: 159 VVASEHVKQGDRIFVSGRL 215 +E + +G R+ VSGRL Sbjct: 65 ENVAESLTRGARVIVSGRL 83
>SSB_ARTNI (Q8GAN5) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 170 Score = 39.7 bits (91), Expect = 0.002 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 11/81 (13%) Frame = +3 Query: 12 SVRLIGTVGTDIELRQLPSGASVARGRIA-----------VWKSATETTWVTLAFWDDLA 158 ++ +IG + D ELR PSG++VA IA WK ET ++ + W ++A Sbjct: 6 TITVIGNLTNDPELRFTPSGSAVANFTIASTPRTFDRQASEWKDG-ETLFLRASVWREMA 64 Query: 159 VVASEHVKQGDRIFVSGRLVS 221 + + +G R+ SGRL S Sbjct: 65 ENVAGSLTKGTRVIASGRLKS 85
>SSB_COREF (Q8FLP9) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 232 Score = 39.3 bits (90), Expect = 0.002 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 11/79 (13%) Frame = +3 Query: 12 SVRLIGTVGTDIELRQLPSGASVARGRIA-----------VWKSATETTWVTLAFWDDLA 158 ++ ++G + D ELR PSGA+VA RIA W+ E ++T W + A Sbjct: 7 NITVVGNLVADPELRFTPSGAAVANFRIASTPRTFNRTTNQWEDG-EGLFLTCNVWREAA 65 Query: 159 VVASEHVKQGDRIFVSGRL 215 +E + +G R+ V GRL Sbjct: 66 ENVAESLTKGMRVIVQGRL 84
>SSB2_LACLA (Q9CDM9) Single-stranded DNA-binding protein 2 (SSB 2)| (Helix-destabilizing protein 2) Length = 166 Score = 38.9 bits (89), Expect = 0.003 Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 6/122 (4%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAV---WKSAT---ETTWVTLAFWDDLAVV 164 + N+V L+G + D ELR P +VA +AV +K+A E ++ W A Sbjct: 1 MINNVVLVGRITRDPELRYTPQNQAVATFSLAVNRQFKNANGEREADFINCVIWRQQAEN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIESFQPVRLYSESGXDGG 344 + K+G I V+GR+ + + +R F +ES + R G G Sbjct: 61 LANWAKKGALIGVTGRIQTRNYENQQGQRVYVTEVVADSFQMLES-RSAREGMGGGTSAG 119 Query: 345 KY 350 Y Sbjct: 120 SY 121
>SSB1_STRP8 (Q8P2H3) Single-stranded DNA-binding protein 1 (SSB 1)| (Helix-destabilizing protein 1) Length = 130 Score = 38.5 bits (88), Expect = 0.004 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 6/104 (5%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAVWKS------ATETTWVTLAFWDDLAVV 164 + N+V LIG + D+ELR PS + A+ +AV ++ E ++ W A Sbjct: 1 MINNVVLIGRLTKDVELRYTPSQVACAQFTLAVNRNFKNQDGQKEADFINCVIWRKSAEN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIE 296 S K+G I ++GR+ + + +R F +E Sbjct: 61 LSNWAKKGQLIAITGRIQTRNYENQQGQRVYVTEVVAESFQILE 104
>SSB_STRMU (Q8DSD8) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 164 Score = 38.5 bits (88), Expect = 0.004 Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 6/120 (5%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAVWKS------ATETTWVTLAFWDDLAVV 164 + N+V L+G + D ELR PS +VA +AV ++ E ++ + W A Sbjct: 1 MINNVVLVGRMTRDAELRYTPSNQAVATFTLAVNRNFKNQNGEREADFINIVIWRQQAEN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIESFQPVRLYSESGXDGG 344 + K+G + ++GR+ + + +R F +ES S S GG Sbjct: 61 LANWAKKGTLLGITGRIQTRNYENQQGQRVYVTEVVADNFQILESRATREGQSNSYNAGG 120
>SSB_BRAJA (Q89L50) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 164 Score = 38.5 bits (88), Expect = 0.004 Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 12/128 (9%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIA---VWKSAT------ETTWVTLAFWDD-LA 158 N V L+G +G D E+R+ G +A IA W+ +T W + +++ L Sbjct: 6 NKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKNSGERKEKTEWHRVVIFNEGLC 65 Query: 159 VVASEHVKQGDRIFVSGRLVSD--TVDEGPEKRXXXXXXXXXXFNFIESFQPVRLYSESG 332 VA +++K+G ++++ G L + T G EK FN + L G Sbjct: 66 KVAEQYLKKGAKVYIEGALQTRKWTDQSGVEK--YSTEVVLQGFNSTLTM----LDGRGG 119 Query: 333 XDGGKYGE 356 GG +GE Sbjct: 120 GGGGSFGE 127
>SSB_STRP3 (P66853) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 163 Score = 38.5 bits (88), Expect = 0.004 Identities = 34/123 (27%), Positives = 51/123 (41%), Gaps = 6/123 (4%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAV---WKSAT---ETTWVTLAFWDDLAVV 164 + N+V L+G + D ELR PS +VA +AV +KS E ++ W A Sbjct: 1 MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAEN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIESFQPVRLYSESGXDGG 344 + K+G I V+GR+ + + +R F +ES R E G G Sbjct: 61 LANWAKKGALIGVTGRIQTRNYENQQGQRVYVTEVVADNFQMLES----RATREGGSTGS 116 Query: 345 KYG 353 G Sbjct: 117 FNG 119
>SSB3_STRP1 (P66852) Single-stranded DNA-binding protein 3 (SSB 3)| (Helix-destabilizing protein 3) Length = 163 Score = 38.5 bits (88), Expect = 0.004 Identities = 34/123 (27%), Positives = 51/123 (41%), Gaps = 6/123 (4%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAV---WKSAT---ETTWVTLAFWDDLAVV 164 + N+V L+G + D ELR PS +VA +AV +KS E ++ W A Sbjct: 1 MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAEN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIESFQPVRLYSESGXDGG 344 + K+G I V+GR+ + + +R F +ES R E G G Sbjct: 61 LANWAKKGALIGVTGRIQTRNYENQQGQRVYVTEVVADNFQMLES----RATREGGSTGS 116 Query: 345 KYG 353 G Sbjct: 117 FNG 119
>SSB2_STRP6 (Q5XA62) Single-stranded DNA-binding protein 2 (SSB 2)| (Helix-destabilizing protein 2) Length = 163 Score = 38.5 bits (88), Expect = 0.004 Identities = 34/123 (27%), Positives = 51/123 (41%), Gaps = 6/123 (4%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAV---WKSAT---ETTWVTLAFWDDLAVV 164 + N+V L+G + D ELR PS +VA +AV +KS E ++ W A Sbjct: 1 MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAEN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIESFQPVRLYSESGXDGG 344 + K+G I V+GR+ + + +R F +ES R E G G Sbjct: 61 LANWAKKGALIGVTGRIQTRNYENQQGQRVYVTEVVADNFQMLES----RATREGGSTGS 116 Query: 345 KYG 353 G Sbjct: 117 FNG 119
>SSB2_LISMO (Q8Y4X1) Single-stranded DNA-binding protein 2 (SSB 2)| (Helix-destabilizing protein 2) Length = 160 Score = 38.5 bits (88), Expect = 0.004 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 6/104 (5%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSAT------ETTWVTLAFWDDLAVV 164 + N V L+G + D +LR P+G +VA +AV ++ T E ++ W A Sbjct: 1 MMNRVVLVGRLTKDPDLRYTPAGVAVATFTLAVNRTFTNQNGEREADFINCVVWRKPAEN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIE 296 + +K+G V GR+ + ++ KR F+E Sbjct: 61 VANFLKKGSMAGVDGRVQTRNYEDNDGKRVFVTEVVAESVQFLE 104
>SSB1_LISMO (Q8YAR8) Single-stranded DNA-binding protein 1 (SSB 1)| (Helix-destabilizing protein 1) Length = 178 Score = 38.1 bits (87), Expect = 0.005 Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 6/104 (5%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSAT------ETTWVTLAFWDDLAVV 164 + N V L+G + D ELR P+G +VA +AV ++ T E ++ W A Sbjct: 1 MMNRVVLVGRLTKDPELRYTPAGVAVATFTLAVNRTFTNQQGEREADFINCVVWRKPAEN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIE 296 + +K+G V GR+ + + KR F+E Sbjct: 61 VANFLKKGSMAGVDGRVQTRNYEGNDGKRVYVTEIVAESVQFLE 104
>SSB2_STRP8 (Q8NZJ0) Single-stranded DNA-binding protein 2 (SSB 2)| (Helix-destabilizing protein 2) Length = 163 Score = 38.1 bits (87), Expect = 0.005 Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 6/123 (4%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAV---WKSAT---ETTWVTLAFWDDLAVV 164 + N+V L+G + D ELR PS +VA +AV +KS E ++ W A Sbjct: 1 MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAEN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIESFQPVRLYSESGXDGG 344 + K+G I ++GR+ + + +R F +ES R E G G Sbjct: 61 LANWAKKGALIGITGRIQTRNYENQQGQRVYVTEVVADNFQMLES----RATREGGSTGS 116 Query: 345 KYG 353 G Sbjct: 117 FNG 119
>SSB1_LISIN (Q92FR5) Single-stranded DNA-binding protein 1 (SSB 1)| (Helix-destabilizing protein 1) Length = 179 Score = 38.1 bits (87), Expect = 0.005 Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 6/104 (5%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSAT------ETTWVTLAFWDDLAVV 164 + N V L+G + D ELR P+G +VA +AV ++ T E ++ W A Sbjct: 1 MMNRVVLVGRLTKDPELRYTPAGVAVATFTLAVNRTFTNQQGEREADFINCVVWRKPAEN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIE 296 + +K+G V GR+ + + KR F+E Sbjct: 61 VANFLKKGSMAGVDGRVQTRNYEGNDGKRVYVTEIVAESVQFLE 104
>SSB3_LISIN (Q928X8) Single-stranded DNA-binding protein 3 (SSB 3)| (Helix-destabilizing protein 3) Length = 160 Score = 37.7 bits (86), Expect = 0.007 Identities = 28/107 (26%), Positives = 44/107 (41%), Gaps = 6/107 (5%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAV------WKSATETTWVTLAFWDDLAVV 164 + N V L+G + D ELR P+G +VA +AV + E ++ W A Sbjct: 1 MMNRVVLVGRLTKDPELRYTPAGVAVATFTLAVNRPFKNGQGEQEADFIQCVVWRKPAEN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIESFQ 305 + +K+G V GR+ + + KR F+ES Q Sbjct: 61 VANFLKKGSLAGVDGRVQTRNYEGNDGKRVYVTEIVAESVQFLESKQ 107
>SSB_RAT (P28042) Single-stranded DNA-binding protein, mitochondrial| precursor (Mt-SSB) (MtSSB) (P16) Length = 151 Score = 37.4 bits (85), Expect = 0.009 Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 15/84 (17%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIA---VWKS-----------ATETTWVTLA-F 143 N V+L+G VG D +RQ+ V +A +W+S + +TTW ++ F Sbjct: 31 NRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMWRSGDNEAYQMGDVSQKTTWHRISVF 90 Query: 144 WDDLAVVASEHVKQGDRIFVSGRL 215 L VA ++VK+G RIFV G++ Sbjct: 91 RPGLRDVAYQYVKKGARIFVEGKV 114
>SSB_BIFLO (Q8G757) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 218 Score = 37.4 bits (85), Expect = 0.009 Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 10/77 (12%) Frame = +3 Query: 15 VRLIGTVGTDIELRQLPSGASVARGRIA----VWKSAT------ETTWVTLAFWDDLAVV 164 + ++G + D ELR + SG +VA IA W T + ++ + W DLA Sbjct: 7 ITIVGNLTADPELRTIGSGVTVASFTIASTPRTWNRQTNQFEDGQALFMRCSAWRDLADH 66 Query: 165 ASEHVKQGDRIFVSGRL 215 ++ +K+G R+ +GRL Sbjct: 67 CAQSLKKGMRVIATGRL 83
>SSB1_STRA5 (P66851) Single-stranded DNA-binding protein 1 (SSB 1)| (Helix-destabilizing protein 1) Length = 163 Score = 37.4 bits (85), Expect = 0.009 Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 6/105 (5%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAVWKS------ATETTWVTLAFWDDLAVV 164 + N+V L+G + D ELR PS +VA +AV ++ E ++ W A Sbjct: 1 MINNVVLVGRMTRDAELRYTPSNQAVATFSLAVNRNFKNQSGEREADFINCVIWRQQAEN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIES 299 + K+G + ++GR+ + + +R F +ES Sbjct: 61 LANWAKKGALVGITGRIQTRNYENQQGQRVYVTEVVAESFQLLES 105
>SSB1_STRA3 (P66850) Single-stranded DNA-binding protein 1 (SSB 1)| (Helix-destabilizing protein 1) Length = 163 Score = 37.4 bits (85), Expect = 0.009 Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 6/105 (5%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAVWKS------ATETTWVTLAFWDDLAVV 164 + N+V L+G + D ELR PS +VA +AV ++ E ++ W A Sbjct: 1 MINNVVLVGRMTRDAELRYTPSNQAVATFSLAVNRNFKNQSGEREADFINCVIWRQQAEN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIES 299 + K+G + ++GR+ + + +R F +ES Sbjct: 61 LANWAKKGALVGITGRIQTRNYENQQGQRVYVTEVVAESFQLLES 105
>SSB_MOUSE (Q9CYR0) Single-stranded DNA-binding protein, mitochondrial| precursor (Mt-SSB) (MtSSB) Length = 152 Score = 37.4 bits (85), Expect = 0.009 Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 15/84 (17%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIA---VWKS-----------ATETTWVTLA-F 143 N V+L+G VG D +RQ+ V +A +W+S + +TTW ++ F Sbjct: 31 NRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMWRSGDSEVYQMGDVSQKTTWHRISVF 90 Query: 144 WDDLAVVASEHVKQGDRIFVSGRL 215 L VA ++VK+G RIFV G++ Sbjct: 91 RPGLRDVAYQYVKKGARIFVEGKV 114
>SSB2_ANASP (Q8ZSD2) Single-stranded DNA-binding protein 2 (SSB 2)| (Helix-destabilizing protein 2) Length = 127 Score = 37.0 bits (84), Expect = 0.012 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVWK--SATETTWVTLAFWDDLAVVASEHVK 182 N V L+G G + +L+ SGA A IAV + + W L W + A V +V+ Sbjct: 5 NKVMLVGRCGQEPDLKFFESGAVKASISIAVRPPYRSEQALWFDLVAWGNQAEVIGNYVR 64 Query: 183 QGDRIFVSGRLVSD 224 +G +I ++G D Sbjct: 65 KGTQIAITGEFGFD 78
>SSB_BACCR (Q814G6) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 170 Score = 37.0 bits (84), Expect = 0.012 Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 6/104 (5%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAV------WKSATETTWVTLAFWDDLAVV 164 + N V L+G + D +LR P+G +VA +AV + E ++ W A Sbjct: 1 MMNRVILVGRLTKDPDLRYTPNGVAVATFTLAVNRAFANQQGEREADFINCVIWRKQAEN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIE 296 + ++K+G V GRL + + KR F+E Sbjct: 61 VANYLKKGSLAGVDGRLQTRNYEGQDGKRVYVTEVLAESVQFLE 104
>SSB4_STRA5 (Q8DXI7) Single-stranded DNA-binding protein 4 (SSB 4)| (Helix-destabilizing protein 4) Length = 138 Score = 37.0 bits (84), Expect = 0.012 Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 6/104 (5%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAV---WKSAT---ETTWVTLAFWDDLAVV 164 + N+V LIG + D+ELR PS + A +AV +K+A E ++ W A Sbjct: 1 MINNVVLIGRLTRDVELRYTPSNIANATFNLAVNRNFKNAAGDREADFINCVMWRQQAEN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIE 296 + K+G I ++GR+ + + + +R F +E Sbjct: 61 LANWTKKGMLIGITGRIQTRSYENQQGQRIYVTEVVADSFQILE 104
>SSB_BACAN (Q81JI3) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 172 Score = 36.6 bits (83), Expect = 0.016 Identities = 26/102 (25%), Positives = 42/102 (41%), Gaps = 6/102 (5%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV------WKSATETTWVTLAFWDDLAVVAS 170 N V L+G + D +LR P+G +VA +AV + E ++ W A + Sbjct: 2 NRVILVGRLTKDPDLRYTPNGVAVATFTLAVNRAFANQQGEREADFINCVIWRKQAENVA 61 Query: 171 EHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIE 296 ++K+G V GRL + + KR F+E Sbjct: 62 NYLKKGSLAGVDGRLQTRNYEGQDGKRVYVTEVLAESVQFLE 103
>SSB_MYCLE (P46390) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 168 Score = 36.6 bits (83), Expect = 0.016 Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 13/127 (10%) Frame = +3 Query: 12 SVRLIGTVGTDIELRQLPSGASVARGRIA-----------VWKSATETTWVTLAFWDDLA 158 ++ ++G + D ELR SGA+V +A WK E ++ W + A Sbjct: 6 TITIVGNLTADPELRFTSSGAAVVNFTVASTPRIYDRQSGEWKDG-EALFLRCNIWREAA 64 Query: 159 VVASEHVKQGDRIFVSGRLVSDTVD--EGPEKRXXXXXXXXXXFNFIESFQPVRLYSESG 332 +E + +G R+ V+GRL + + EG ++ + + V S SG Sbjct: 65 ENVAESLTRGARVIVTGRLKQRSFETREGEKRTVVEVEVDEIGPSLRYATAKVNKASRSG 124 Query: 333 XDGGKYG 353 GG +G Sbjct: 125 GGGGGFG 131
>SSB_HUMAN (Q04837) Single-stranded DNA-binding protein, mitochondrial| precursor (Mt-SSB) (MtSSB) (PWP1-interacting protein 17) Length = 148 Score = 36.6 bits (83), Expect = 0.016 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 15/84 (17%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIA---VWKS-----------ATETTWVTLA-F 143 N V L+G VG D LRQ+ V +A +W+S + +TTW ++ F Sbjct: 31 NRVHLLGRVGQDPVLRQVEGKNPVTIFSLATNEMWRSGDSEVYQLGDVSQKTTWHRISVF 90 Query: 144 WDDLAVVASEHVKQGDRIFVSGRL 215 L VA ++VK+G RI++ G++ Sbjct: 91 RPGLRDVAYQYVKKGSRIYLEGKI 114
>SSB_DEIRA (Q9RY51) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 301 Score = 36.6 bits (83), Expect = 0.016 Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 8/80 (10%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV--------WKSATETTWVTLAFWDDLAVV 164 N V ++G V D E+R P+G +V IAV + + ++ W DLA Sbjct: 130 NEVLVLGNVTRDPEIRYTPAGDAVLSLSIAVNENYQDRQGQRQEKVHYIDATLWRDLAEN 189 Query: 165 ASEHVKQGDRIFVSGRLVSD 224 E +++GD + + GRLV++ Sbjct: 190 MKE-LRKGDPVMIMGRLVNE 208
>SSB_OCEIH (Q8CX55) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 161 Score = 36.2 bits (82), Expect = 0.020 Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 6/105 (5%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAV------WKSATETTWVTLAFWDDLAVV 164 + N V L+G + D +LR P+G +VA IAV + E ++ W A Sbjct: 1 MLNRVVLVGRLTRDPDLRYTPNGVAVANFNIAVNRPFSNQQGNREADFINCVIWRRPAEN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIES 299 + ++K+G + V GR+ + + K F+E+ Sbjct: 61 LANYMKKGSMVGVDGRIQTRNFEGQDGKTVYVTEVVADSVQFLET 105
>SSBS_XENLA (P09380) Single-stranded DNA-binding protein S, mitochondrial| precursor (Mt-SSB-S) (Mt-SSB 1) Length = 146 Score = 35.8 bits (81), Expect = 0.027 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 16/85 (18%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIA---VWKSAT------------ETTWVTLA- 140 N V+L+G VG D +RQ V +A +W+S +TTW ++ Sbjct: 29 NKVQLLGRVGQDPVMRQAEGKNPVTIFSLATNELWRSGESETFHTAGDVNQKTTWHRISV 88 Query: 141 FWDDLAVVASEHVKQGDRIFVSGRL 215 F L VA +HVK+G R+ V G++ Sbjct: 89 FRPGLRDVAYQHVKKGARLLVEGKI 113
>SSB_HELPJ (Q9ZJY2) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 181 Score = 35.4 bits (80), Expect = 0.035 Identities = 20/104 (19%), Positives = 47/104 (45%), Gaps = 8/104 (7%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVWKS--------ATETTWVTLAFWDDLAVV 164 N V ++G + ++EL+ LPSG++ A +A + E ++ + A + Sbjct: 3 NKVIMVGRLTRNVELKYLPSGSAAATIGLATSRRFKKQDGTLGEEVCFIDARLFGRTAEI 62 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIE 296 A++++ +G + + GRL ++ + K+ F++ Sbjct: 63 ANQYLSKGSSVLIEGRLTYESWMDQTGKKNSRHTITADSLQFMD 106
>SSB_HELPY (O25841) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 179 Score = 35.4 bits (80), Expect = 0.035 Identities = 20/104 (19%), Positives = 47/104 (45%), Gaps = 8/104 (7%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVWKS--------ATETTWVTLAFWDDLAVV 164 N V ++G + ++EL+ LPSG++ A +A + E ++ + A + Sbjct: 3 NKVIMVGRLTRNVELKYLPSGSAAATIGLATSRRFKKQDGTLGEEVCFIDARLFGRTAEI 62 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIE 296 A++++ +G + + GRL ++ + K+ F++ Sbjct: 63 ANQYLSKGSSVLIEGRLTYESWMDQTGKKNSRHTITADSLQFMD 106
>SSBR_XENLA (P09381) Single-stranded DNA-binding protein R, mitochondrial| precursor (Mt-SSB-R) (Mt-SSB 2) Length = 148 Score = 35.4 bits (80), Expect = 0.035 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 16/85 (18%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIA---VWKSAT------------ETTWVTLA- 140 N V+L+G VG D +RQ V +A +W+S +TTW ++ Sbjct: 31 NKVQLLGRVGQDPVMRQADGKNPVTIFSLATNELWRSGENEVFQPAGDVNQKTTWHRVSV 90 Query: 141 FWDDLAVVASEHVKQGDRIFVSGRL 215 F L VA +HVK+G R+ V G++ Sbjct: 91 FRPGLRDVAYQHVKKGARLLVEGKI 115
>SSB_BACTN (Q8A7M7) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 161 Score = 35.0 bits (79), Expect = 0.045 Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 10/79 (12%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSA----------TETTWVTLAFWDDLA 158 N V LIG VG D ++ +G++VA +A T W + + LA Sbjct: 4 NKVILIGNVGQDPRVKYFDTGSAVATFPLATTDRGYTLANGTQIPERTEWHNIVASNRLA 63 Query: 159 VVASEHVKQGDRIFVSGRL 215 + ++V +GD++++ G++ Sbjct: 64 EIVDKYVHKGDKLYLEGKI 82
>SSB_XYLFT (Q87DQ5) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 164 Score = 35.0 bits (79), Expect = 0.045 Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 10/90 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV--------WKSATETTWVTLAFWDDLAVV 164 N V L+G +G D +++ G ++ +A + T W + F+ L + Sbjct: 6 NKVILVGNLGNDPDIKYTQGGMTITTISLATTSVRKDKDGNTQERTEWHRVKFFGKLGEI 65 Query: 165 ASEHVKQGDRIFVSGRLVSD--TVDEGPEK 248 A E++++G + ++ G + D T +G E+ Sbjct: 66 AGEYLRKGSQCYIEGSIRYDKFTGQDGQER 95
>SSB2_XYLFA (Q9PDI7) Single-stranded DNA-binding protein 2 (SSB 2)| (Helix-destabilizing protein 2) Length = 164 Score = 35.0 bits (79), Expect = 0.045 Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 10/90 (11%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV--------WKSATETTWVTLAFWDDLAVV 164 N V L+G +G D +++ G ++ +A + T W + F+ L + Sbjct: 6 NKVILVGNLGNDPDIKYTQGGMTITTISLATTSVRKDKEGNTQERTEWHRVKFFGKLGEI 65 Query: 165 ASEHVKQGDRIFVSGRLVSD--TVDEGPEK 248 A E++++G + ++ G + D T +G E+ Sbjct: 66 AGEYLRKGSQCYIEGSIRYDKFTGQDGQER 95
>SSB1_LACLA (Q9CGS5) Single-stranded DNA-binding protein 1 (SSB 1)| (Helix-destabilizing protein 1) Length = 150 Score = 34.7 bits (78), Expect = 0.059 Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 6/105 (5%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAV---WKSAT---ETTWVTLAFWDDLAVV 164 + N+V L+G + D ELR P +V +AV +K+A E ++ W A Sbjct: 1 MINNVVLVGRLTRDPELRHTPQNQAVGTFGLAVNRQFKNANGEREADFINCVIWRQQAEN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIES 299 ++ K+G I ++GR+ + + ++ F +ES Sbjct: 61 LAKFAKKGALIGITGRIQTRNYENQQGQKVYVTEVVADTFQMLES 105
>SSB_STAAC (Q5HIS8) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 167 Score = 33.5 bits (75), Expect = 0.13 Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 6/104 (5%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSAT------ETTWVTLAFWDDLAVV 164 + N V L+G + D E R PSG SVA +AV ++ T E ++ + A Sbjct: 1 MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIE 296 + ++ +G V GRL S + +R F+E Sbjct: 61 VNNYLSKGSLAGVDGRLQSRNYENQEGRRVFVTEVVCDSVQFLE 104
>SSB2_STAAS (Q6GCA6) Single-stranded DNA-binding protein 2 (SSB 2)| (Helix-destabilizing protein 2) Length = 167 Score = 33.5 bits (75), Expect = 0.13 Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 6/104 (5%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSAT------ETTWVTLAFWDDLAVV 164 + N V L+G + D E R PSG SVA +AV ++ T E ++ + A Sbjct: 1 MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIE 296 + ++ +G V GRL S + +R F+E Sbjct: 61 VNNYLSKGSLAGVDGRLQSRNYENQEGRRVFVTEVVCDSVQFLE 104
>SSBP_STAAC (Q5HJ26) Prophage-derived single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 139 Score = 33.5 bits (75), Expect = 0.13 Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 6/104 (5%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSAT------ETTWVTLAFWDDLAVV 164 + N L+G + D ELR P+G +V +AV ++ T E ++ + + A Sbjct: 1 MLNRTVLVGRLTKDPELRSTPNGVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAEN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIE 296 ++ +G V GRL + + D +R F+E Sbjct: 61 VKNYLSKGSLAGVDGRLQTRSYDNKEGRRVFVTEVVADSVQFLE 104
>SSB_CLOPE (Q8XH44) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 150 Score = 33.1 bits (74), Expect = 0.17 Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 3/100 (3%) Frame = +3 Query: 9 NSVRLIGTVGTDIELR-QLPSGASVARGRIAVWKS--ATETTWVTLAFWDDLAVVASEHV 179 N V LIG + D ELR SG +VAR +AV + E +++ + ++++ Sbjct: 2 NKVVLIGRLTKDPELRFAAGSGTAVARFTLAVNRQFKKDEADFISCIAFGKTGETIAQYI 61 Query: 180 KQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIES 299 +G ++ VSG + + + + R F+FI+S Sbjct: 62 TKGRQLAVSGNIRTGSYEAQDGTRRYTTDVVVESFDFIDS 101
>SSB_RICCN (Q92G30) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 152 Score = 32.7 bits (73), Expect = 0.22 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 10/79 (12%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIA---VWKS------ATETTW-VTLAFWDDLA 158 N V LIG VG D E+R G + +A WK T W + F + L Sbjct: 6 NKVILIGNVGRDPEMRTTGEGKKIINLSLATTETWKDRITSERKERTEWHRVVIFSEGLV 65 Query: 159 VVASEHVKQGDRIFVSGRL 215 V +V +G ++++ G L Sbjct: 66 SVVERYVTKGSKLYIEGSL 84
>SSB_LACPL (Q890K1) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 200 Score = 32.7 bits (73), Expect = 0.22 Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 6/105 (5%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSAT------ETTWVTLAFWDDLAVV 164 + N L+G + D ELR GA+VA IAV + T E +++ W A Sbjct: 1 MINRTILVGRLTRDPELRYTNGGAAVATFTIAVNRQFTNQNGEREADFISCVIWRKAAEN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIES 299 + +G + + GR+ + + R F+ +ES Sbjct: 61 FANFTHKGSLVGIDGRIQTRNYENQQGVRVYVTEVVVENFSLLES 105
>PKCB1_HUMAN (Q9ULU4) Protein kinase C-binding protein 1 (Rack7) (Cutaneous| T-cell lymphoma associated antigen se14-3) (CTCL tumor antigen se14-3) (Zinc finger MYND domain containing protein 8) Length = 1186 Score = 32.7 bits (73), Expect = 0.22 Identities = 27/71 (38%), Positives = 32/71 (45%) Frame = -3 Query: 238 PSSTVSDTSRPETNMRSPCLTCSEATTAKSSQNARVTHVVSVADFQTAMRPRATEAPLGS 59 PS+TV S PET P LT S A T S+ A T S TA P AT +P+ Sbjct: 748 PSTTVGSHSPPET----PVLTRSSAQT--SAAGATATTSTSSTVTVTAPAPAATGSPVKK 801 Query: 58 WRSSMSVPTVP 26 R + T P Sbjct: 802 QRPLLPKETAP 812
>SSB_RICPR (Q9ZCC2) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 152 Score = 32.3 bits (72), Expect = 0.29 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 10/79 (12%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIA---VWKS------ATETTW-VTLAFWDDLA 158 N V LIG VG D E+R G + +A WK T W + F + L Sbjct: 6 NKVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRITSERKERTEWHRVVIFSEGLV 65 Query: 159 VVASEHVKQGDRIFVSGRL 215 + +V +G ++++ G L Sbjct: 66 SIVERYVTKGSKLYIEGSL 84
>SSB3_CLOAB (Q97CX3) Single-stranded DNA-binding protein 3 (SSB 3)| (Helix-destabilizing protein 3) Length = 144 Score = 32.0 bits (71), Expect = 0.38 Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 6/102 (5%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLP-SGASVARGRIAVWK-----SATETTWVTLAFWDDLAVVAS 170 N V LIG + D EL+ P +G +VA +AV + E ++ + W A + Sbjct: 2 NKVVLIGRLTKDPELKFTPGTGTAVASFTLAVDRRFKKEGQQEADFIPIVVWGKQAESTA 61 Query: 171 EHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIE 296 ++ +G + VSGR+ + + D R F+E Sbjct: 62 NYMSKGKLMGVSGRIQTRSYDAKDGTRRYVTEIVAEEVQFLE 103
>HELI_MOUSE (P81183) Zinc finger protein Helios| Length = 526 Score = 32.0 bits (71), Expect = 0.38 Identities = 16/58 (27%), Positives = 31/58 (53%) Frame = -3 Query: 241 GPSSTVSDTSRPETNMRSPCLTCSEATTAKSSQNARVTHVVSVADFQTAMRPRATEAP 68 GP+S + SRP+ SP +C ++T ++SS + R ++ A+ P+ ++P Sbjct: 382 GPTSLIRPKSRPQEREASPSNSCLDSTDSESSHDDRQSY-----QGNPALNPKRKQSP 434
>SSB2_TROWT (P66856) Single-stranded DNA-binding protein 2 (SSB 2)| (Helix-destabilizing protein 2) Length = 148 Score = 31.6 bits (70), Expect = 0.50 Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 11/80 (13%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV-----------WKSATETTWVTLAFWDDL 155 N + + G V T+ G + R+A W S +T W T+ + L Sbjct: 7 NHITVSGLVATEPRSFLTAEGVHITSFRLAAQDRHFSRNANSWVSG-DTNWFTVTGFRAL 65 Query: 156 AVVASEHVKQGDRIFVSGRL 215 A+E + +GDR+ V GRL Sbjct: 66 GSNAAESISKGDRVIVYGRL 85
>SSB2_TROW8 (P66857) Single-stranded DNA-binding protein 2 (SSB 2)| (Helix-destabilizing protein 2) Length = 148 Score = 31.6 bits (70), Expect = 0.50 Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 11/80 (13%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPSGASVARGRIAV-----------WKSATETTWVTLAFWDDL 155 N + + G V T+ G + R+A W S +T W T+ + L Sbjct: 7 NHITVSGLVATEPRSFLTAEGVHITSFRLAAQDRHFSRNANSWVSG-DTNWFTVTGFRAL 65 Query: 156 AVVASEHVKQGDRIFVSGRL 215 A+E + +GDR+ V GRL Sbjct: 66 GSNAAESISKGDRVIVYGRL 85
>SSB_STAAW (Q8NVN2) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 156 Score = 31.6 bits (70), Expect = 0.50 Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 6/104 (5%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSAT------ETTWVTLAFWDDLAVV 164 + N L+G + D ELR SG +VA +AV ++ T E ++ + + A Sbjct: 1 MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAEN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIE 296 ++++ +G V GRL + + +R F+E Sbjct: 61 VNKYLSKGSLAGVDGRLQTRNYENKEGQRVYVTEVVADSIQFLE 104
>SSB_STAAR (Q6GF73) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 156 Score = 31.6 bits (70), Expect = 0.50 Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 6/104 (5%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSAT------ETTWVTLAFWDDLAVV 164 + N L+G + D ELR SG +VA +AV ++ T E ++ + + A Sbjct: 1 MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAEN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIE 296 ++++ +G V GRL + + +R F+E Sbjct: 61 VNKYLSKGSLAGVDGRLQTRNYENKEGQRVYVTEVVADSIQFLE 104
>SSB_STAAN (Q99SQ9) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 156 Score = 31.6 bits (70), Expect = 0.50 Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 6/104 (5%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSAT------ETTWVTLAFWDDLAVV 164 + N L+G + D ELR SG +VA +AV ++ T E ++ + + A Sbjct: 1 MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAEN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIE 296 ++++ +G V GRL + + +R F+E Sbjct: 61 VNKYLSKGSLAGVDGRLQTRNYENKEGQRVYVTEVIADSIQFLE 104
>SSB_STAAM (Q931K4) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 156 Score = 31.6 bits (70), Expect = 0.50 Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 6/104 (5%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSAT------ETTWVTLAFWDDLAVV 164 + N L+G + D ELR SG +VA +AV ++ T E ++ + + A Sbjct: 1 MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAEN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIE 296 ++++ +G V GRL + + +R F+E Sbjct: 61 VNKYLSKGSLAGVDGRLQTRNYENKEGQRVYVTEVIADSIQFLE 104
>SSB1_STAAS (Q6G7V6) Single-stranded DNA-binding protein 1 (SSB 1)| (Helix-destabilizing protein 1) Length = 156 Score = 31.6 bits (70), Expect = 0.50 Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 6/104 (5%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSAT------ETTWVTLAFWDDLAVV 164 + N L+G + D ELR SG +VA +AV ++ T E ++ + + A Sbjct: 1 MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAEN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIE 296 ++++ +G V GRL + + +R F+E Sbjct: 61 VNKYLSKGSLAGVDGRLQTRNYENKEGQRVYVTEVVADSIQFLE 104
>SSB_THETN (Q8R6M2) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 150 Score = 31.2 bits (69), Expect = 0.65 Identities = 23/104 (22%), Positives = 43/104 (41%), Gaps = 6/104 (5%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSATE------TTWVTLAFWDDLAVV 164 + N V LIG + D +R V +AV ++ T ++ + W LA + Sbjct: 1 MLNKVILIGRLTKDPVMRYTSDMVPVTTFTLAVNRNYVSQSGERPTDFIPIVTWRKLAEI 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIE 296 + ++K+G + V+G + + T D+ R F+E Sbjct: 61 CANNLKKGRLVAVTGSIQTRTWDDSSGNRHWVTEVVADDVRFLE 104
>SSBP_STAAM (Q932A8) Prophage-derived single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 141 Score = 31.2 bits (69), Expect = 0.65 Identities = 23/104 (22%), Positives = 42/104 (40%), Gaps = 6/104 (5%) Frame = +3 Query: 3 LCNSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSAT------ETTWVTLAFWDDLAVV 164 + N L+G + D ELR P+G +V +AV ++ T E ++ + + A Sbjct: 1 MLNRTVLVGRLTKDPELRSTPNGVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAEN 60 Query: 165 ASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIE 296 ++ +G V GRL + + +R F+E Sbjct: 61 VKNYLSKGSLAGVDGRLQTRNYENKDGQRVFVTEVVADSVQFLE 104
>LDLR_RABIT (P20063) Low-density lipoprotein receptor (LDL receptor) (Fragment)| Length = 837 Score = 30.8 bits (68), Expect = 0.85 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 5/74 (6%) Frame = -3 Query: 208 PETNMRSPCLTCS--EATTAKSSQNARVTH---VVSVADFQTAMRPRATEAPLGSWRSSM 44 P+ N SP TC+ + T + + T ++S TA RP+ T +P G+ + + Sbjct: 672 PQINSHSPKFTCACPDGTLLAADMRSCRTEADVILSTQRASTAARPQLTGSPAGTTQEPL 731 Query: 43 SVPTVPMSRTELQS 2 + PT+ T S Sbjct: 732 TEPTLSTLETATTS 745
>MSB2_YEAST (P32334) Protein MSB2 (Multicopy suppressor of bud emergence 2)| Length = 1306 Score = 30.0 bits (66), Expect = 1.5 Identities = 22/69 (31%), Positives = 29/69 (42%) Frame = -3 Query: 244 SGPSSTVSDTSRPETNMRSPCLTCSEATTAKSSQNARVTHVVSVADFQTAMRPRATEAPL 65 S S VSDTS P T+ RS S+ +S + V+ S T R T + Sbjct: 779 SSSVSQVSDTSVPSTSSRSSVSQVSDTPVPSTSSRSSVSQTSSSLQPTTTSSQRFTISTH 838 Query: 64 GSWRSSMSV 38 G+ S SV Sbjct: 839 GALSESSSV 847
>BMP2K_HUMAN (Q9NSY1) BMP-2-inducible protein kinase (EC 2.7.11.1) (BIKe)| Length = 1161 Score = 29.6 bits (65), Expect = 1.9 Identities = 22/78 (28%), Positives = 40/78 (51%) Frame = -3 Query: 238 PSSTVSDTSRPETNMRSPCLTCSEATTAKSSQNARVTHVVSVADFQTAMRPRATEAPLGS 59 P S ++++S P + P +T SEA KS AR+T ++ +T++ PR + Sbjct: 324 PVSNINNSSIPSA-LPEP-MTASEAAARKSQIKARITD--TIGPTETSIAPRQRPKANSA 379 Query: 58 WRSSMSVPTVPMSRTELQ 5 ++ SV T+ S T ++ Sbjct: 380 TTATPSVLTIQSSATPVK 397
>VATB_BORBU (O51120) V-type ATP synthase beta chain (EC 3.6.3.14) (V-type| ATPase subunit B) Length = 434 Score = 29.6 bits (65), Expect = 1.9 Identities = 17/53 (32%), Positives = 28/53 (52%) Frame = -2 Query: 167 GHNSQVVPKCKSYPCGLGGRLPDGNAPPRDGGAAGELAQLDVGAHRPDEPHRV 9 GH+ QV S+ L GR+ DG+ PRDGG + + +++G + R+ Sbjct: 71 GHSMQV-----SFSDNLLGRIFDGSGNPRDGGPSLDDNLIEIGGPSANPTKRI 118
>SSB_CHLTR (O84048) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 157 Score = 29.6 bits (65), Expect = 1.9 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 3/68 (4%) Frame = +3 Query: 21 LIGTVGTDIELRQLPSGASVARGRIAVWK---SATETTWVTLAFWDDLAVVASEHVKQGD 191 L+G + D E R G V R+ V S ET W W++ ++K+G Sbjct: 6 LVGFLAADPEERMTSGGKRVVVLRLGVKSRVGSKDETVWCRCNIWNNRYDKMLPYLKKGS 65 Query: 192 RIFVSGRL 215 + V+G L Sbjct: 66 SVIVAGEL 73
>SSB_CHLMU (Q9PKZ4) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 157 Score = 29.6 bits (65), Expect = 1.9 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 3/68 (4%) Frame = +3 Query: 21 LIGTVGTDIELRQLPSGASVARGRIAVWK---SATETTWVTLAFWDDLAVVASEHVKQGD 191 L+G + D E R G V R+ V S ET W W++ ++K+G Sbjct: 6 LVGFLAADPEERMTSGGKRVVVLRLGVKSRVGSKDETVWCRCNIWNNRYDKMIPYLKKGS 65 Query: 192 RIFVSGRL 215 + V+G L Sbjct: 66 SVIVAGEL 73
>SSB2_CLOAB (Q97HT8) Single-stranded DNA-binding protein 2 (SSB 2)| (Helix-destabilizing protein 2) Length = 133 Score = 29.6 bits (65), Expect = 1.9 Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLPS-GASVARGRIAVWK-----SATETTWVTLAFWDDLAVVAS 170 N LIG + D EL+ +P+ G + +AV + E ++ + W A + Sbjct: 2 NKTILIGRLTKDPELKYIPNTGTATCNFTLAVDRRFKKEGQQEADFIPIVVWGKQAESTA 61 Query: 171 EHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIE 296 ++ +G + VSGR+ + + D R F+E Sbjct: 62 NYMSKGKLMGVSGRIQTRSYDAKDGTRRYVTEVVAEEVKFLE 103
>EPN2_HUMAN (O95208) Epsin-2 (EPS-15-interacting protein 2)| Length = 642 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/40 (40%), Positives = 23/40 (57%) Frame = -3 Query: 214 SRPETNMRSPCLTCSEATTAKSSQNARVTHVVSVADFQTA 95 SRP + PCLTC A A++S + RV+ + A QT+ Sbjct: 237 SRPNGDWSQPCLTCDRA--ARASTSPRVSSELEQARPQTS 274
>FATH_HUMAN (Q14517) Cadherin-related tumor suppressor homolog precursor (Protein| fat homolog) Length = 4590 Score = 28.9 bits (63), Expect = 3.2 Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 3/45 (6%) Frame = -2 Query: 167 GHNSQVVPKCKSYPCGLGGRL---PDGNAPPRDGGAAGELAQLDV 42 G Q+ P CK PC GG DG D G GE Q D+ Sbjct: 4086 GQRCQLSPYCKDEPCKNGGTCFDSLDGAVCQCDSGFRGERCQSDI 4130
>HELI_HUMAN (Q9UKS7) Zinc finger protein Helios| Length = 526 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/58 (25%), Positives = 29/58 (50%) Frame = -3 Query: 241 GPSSTVSDTSRPETNMRSPCLTCSEATTAKSSQNARVTHVVSVADFQTAMRPRATEAP 68 GP S + SRP+ SP +C ++T ++SS + ++ A+ P+ ++P Sbjct: 382 GPISLIRPKSRPQEREASPSNSCLDSTDSESSHDDHQSY-----QGHPALNPKRKQSP 434
>SPD3_MOUSE (Q6P6N5) Sprouty-related, EVH1 domain-containing protein 3| (Spred-3) Length = 408 Score = 28.5 bits (62), Expect = 4.2 Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 8/79 (10%) Frame = -3 Query: 238 PSSTVSDTSRPETNMRSPCLTCSEATTAKSSQNAR--------VTHVVSVADFQTAMRPR 83 PSS+ S +S + +PC S + SS ++R + V S A F A RP+ Sbjct: 120 PSSSSSSSSPSQDTAETPCPLTSHVDSDSSSSHSRQETPPTAPIATVESAAAFPLATRPQ 179 Query: 82 ATEAPLGSWRSSMSVPTVP 26 + S+ + +P Sbjct: 180 RRRSSAQSYPPLLPFTGIP 198
>PUNA_MYCTU (P0A538) Purine nucleoside phosphorylase (EC 2.4.2.1) (Inosine| phosphorylase) (PNP) Length = 268 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = -2 Query: 98 GNAPPRDGGAAGELAQLDVGAHR 30 G PP G AGEL + +GAHR Sbjct: 59 GFVPPTAAGHAGELLSVPIGAHR 81
>PUNA_MYCBO (P0A539) Purine nucleoside phosphorylase (EC 2.4.2.1) (Inosine| phosphorylase) (PNP) Length = 268 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = -2 Query: 98 GNAPPRDGGAAGELAQLDVGAHR 30 G PP G AGEL + +GAHR Sbjct: 59 GFVPPTAAGHAGELLSVPIGAHR 81
>SSB_CLOTE (Q899R2) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 145 Score = 28.5 bits (62), Expect = 4.2 Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 6/102 (5%) Frame = +3 Query: 9 NSVRLIGTVGTDIELRQLP-SGASVARGRIAVWK-----SATETTWVTLAFWDDLAVVAS 170 N V LIG + D EL+ P +G +V +AV + E ++ + W A + Sbjct: 2 NRVVLIGRLTKDPELKFTPGTGTAVTTFVLAVDRRFSKDGKNEADFIPVVVWGKQAESTA 61 Query: 171 EHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIE 296 ++ +G I +SGR+ + + + R F+E Sbjct: 62 NYMSKGKLIGISGRIQTRSYEAKDGTRRYVTEVVADEVKFLE 103
>KR111_CAPHI (Q6R648) Keratin-associated protein 11-1 (High sulfur| keratin-associated protein 11.1) Length = 159 Score = 28.5 bits (62), Expect = 4.2 Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Frame = -3 Query: 235 SSTVSDTSRPETNMRSPC-LTCSEATTAKSSQNARVTHVVSVADFQTAMRPRATEAPLGS 59 SS V TSR T + SPC TCS T SS ++ V +V +R +T Sbjct: 75 SSPVQVTSRQTTCVSSPCSTTCSRPLTFISSGCQPLSGVSTVC---KPVRSISTVCQPVG 131 Query: 58 WRSSMSVPTVPMSRTELQS 2 S++ PT +SRT QS Sbjct: 132 GVSTICQPTCGVSRTYQQS 150
>YD14_SCHPO (Q10237) Hypothetical protein C4G9.04c in chromosome I| Length = 638 Score = 28.1 bits (61), Expect = 5.5 Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Frame = -2 Query: 242 RPLINSI*YKPSRNK-YAVSLFNMLRGHNSQVVPKCK 135 +P+I+++ Y N+ YA+S+ N + H + P CK Sbjct: 20 KPIIHTLTYIAQENEPYAISIVNAIEKHIQKCPPNCK 56
>HOR1_HORVU (P06470) B1-hordein precursor| Length = 293 Score = 28.1 bits (61), Expect = 5.5 Identities = 17/55 (30%), Positives = 25/55 (45%) Frame = -1 Query: 273 RQPCSKPAASQAPHQQYLIQAVQKQICGLPV*HAQRPQQPSRPKMQELPMWSRWP 109 +QP P P Q + Q V +Q P + Q+P P +P Q+ P W + P Sbjct: 38 QQPQPYPQQPFPPQQPFPQQPVPQQ----PQPYPQQPFPPQQPFPQQPPFWQQKP 88
>JAG1B_BRARE (Q90Y54) Jagged-1b precursor (Jagged1b) (Jagged3)| Length = 1213 Score = 28.1 bits (61), Expect = 5.5 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%) Frame = -2 Query: 149 VPKCKSYPCGLGGRLPD---GNAPPRDGGAAGELAQLDVGAHRPD 24 V +C S PC GGR D G G +G+L QLD+ +P+ Sbjct: 485 VDECASSPCLNGGRCQDEVNGFQCLCPAGFSGQLCQLDIDYCKPN 529
>YFGG_SCHPO (O13854) Hypothetical serine/threonine-rich protein C19G12.16c| precursor Length = 670 Score = 28.1 bits (61), Expect = 5.5 Identities = 27/90 (30%), Positives = 39/90 (43%) Frame = -3 Query: 274 TTTL**TCRFSGPSSTVSDTSRPETNMRSPCLTCSEATTAKSSQNARVTHVVSVADFQTA 95 TTT+ T S P T+S S T S + S +T SS + T +S + ++ Sbjct: 571 TTTMTTTTCSSRPEETISTVSTTSTVSESGSSSASITSTYPSSTLSMTTSHLSSSSVHSS 630 Query: 94 MRPRATEAPLGSWRSSMSVPTVPMSRTELQ 5 ++ S SSMS+P S T LQ Sbjct: 631 SAHSSS-----SRSSSMSLPPSAGSSTSLQ 655
>PCDB7_PANTR (Q5DRC7) Protocadherin beta 7 precursor (PCDH-beta7)| Length = 793 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -2 Query: 101 DGNAPPRDGGAAGELAQLDVGAHRPD 24 DG +PPR G A + LDV + PD Sbjct: 216 DGGSPPRSGTALVRILVLDVNDNAPD 241
>PCDB7_HUMAN (Q9Y5E2) Protocadherin beta 7 precursor (PCDH-beta7)| Length = 793 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -2 Query: 101 DGNAPPRDGGAAGELAQLDVGAHRPD 24 DG +PPR G A + LDV + PD Sbjct: 216 DGGSPPRSGTALVRILVLDVNDNAPD 241
>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor| Length = 866 Score = 27.7 bits (60), Expect = 7.2 Identities = 20/66 (30%), Positives = 31/66 (46%) Frame = -3 Query: 244 SGPSSTVSDTSRPETNMRSPCLTCSEATTAKSSQNARVTHVVSVADFQTAMRPRATEAPL 65 S S+T + TS P T+ +P SEATTA +S + + + TA + +P Sbjct: 379 SAESTTEAPTSTPTTDTTTP----SEATTATTSPESTTVSASTTSATTTAFTTESHTSPD 434 Query: 64 GSWRSS 47 S S+ Sbjct: 435 SSTGST 440
>STCJ_EMENI (Q00681) Putative sterigmatocystin biosynthesis fatty acid synthase| alpha subunit Length = 1559 Score = 27.7 bits (60), Expect = 7.2 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = -2 Query: 149 VPKCKSYPCGLGGRLPDGNAPPRDGGAAGELAQLD 45 VPK P G+ G+LP G +P R G A + Q+D Sbjct: 928 VPKSIMSPPGVAGQLPTGWSPERYGIPAEIVQQVD 962
>OBSCN_HUMAN (Q5VST9) Obscurin (Obscurin-myosin light chain kinase)| (Obscurin-MLCK) (Obscurin-RhoGEF) Length = 7968 Score = 27.7 bits (60), Expect = 7.2 Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 8/57 (14%) Frame = -2 Query: 164 HNSQVVPKCKSYPCGLGGRL---PDGNAPPRDGGAAGELAQL-DVGAH----RPDEP 18 H+S P+ S CG RL P G AP RD G QL G H +P+ P Sbjct: 6966 HDSPSTPRPSSEACGEAQRLPSAPSGGAPIRDMGHPQGSKQLPSTGGHPGTAQPERP 7022
>VGLX_EHV1B (P28968) Glycoprotein X precursor| Length = 797 Score = 27.7 bits (60), Expect = 7.2 Identities = 20/66 (30%), Positives = 31/66 (46%) Frame = -3 Query: 244 SGPSSTVSDTSRPETNMRSPCLTCSEATTAKSSQNARVTHVVSVADFQTAMRPRATEAPL 65 S S+T + TS P T+ +P SEATTA +S + + + TA + +P Sbjct: 310 SAESTTEAPTSTPTTDTTTP----SEATTATTSPESTTVSASTTSATTTAFTTESHTSPD 365 Query: 64 GSWRSS 47 S S+ Sbjct: 366 SSTGST 371
>VG11_ICHV1 (Q00164) Hypothetical gene 11 zinc-binding protein| Length = 281 Score = 27.7 bits (60), Expect = 7.2 Identities = 22/66 (33%), Positives = 29/66 (43%) Frame = +3 Query: 21 LIGTVGTDIELRQLPSGASVARGRIAVWKSATETTWVTLAFWDDLAVVASEHVKQGDRIF 200 +I TVG +E R P GA R R W+ A + L DDL + G ++ Sbjct: 115 VIITVGALVETRGAPEGAVRVRAR-GKWEGAIA---LPLPLLDDLVELGGAIEAAGGKVA 170 Query: 201 VSGRLV 218 V G LV Sbjct: 171 VGGFLV 176
>COPZ_SCHPO (O74891) Probable coatomer subunit zeta (Zeta-coat protein)| (Zeta-COP) Length = 190 Score = 27.3 bits (59), Expect = 9.4 Identities = 14/57 (24%), Positives = 22/57 (38%) Frame = +3 Query: 144 WDDLAVVASEHVKQGDRIFVSGRLVSDTVDEGPEKRXXXXXXXXXXFNFIESFQPVR 314 +D L +V E + G + L++ V +GP F+ SFQ R Sbjct: 122 YDQLVIVVDETIDDGVILETEPALIAARVTKGPVSEAQAIVSDFKEMGFMNSFQKAR 178
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 27.3 bits (59), Expect = 9.4 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 1/75 (1%) Frame = -3 Query: 232 STVSDTSRPETNMRSPCLTCSEATTAKSSQNARVTHVVSVADFQTAMRPRA-TEAPLGSW 56 ST+ +S PET S LT + T ++ A + + T + A T A GS Sbjct: 4717 STIHTSSTPETTHTSTVLTTTATMTRATNSTATPSSTLGTTRILTELTTTATTTAATGST 4776 Query: 55 RSSMSVPTVPMSRTE 11 + S P TE Sbjct: 4777 ATLSSTPGTTWILTE 4791
>BRCA2_RAT (O35923) Breast cancer type 2 susceptibility protein homolog (Fanconi| anemia group D1 protein homolog) Length = 3343 Score = 27.3 bits (59), Expect = 9.4 Identities = 21/78 (26%), Positives = 32/78 (41%) Frame = -3 Query: 244 SGPSSTVSDTSRPETNMRSPCLTCSEATTAKSSQNARVTHVVSVADFQTAMRPRATEAPL 65 S P T+ D +M +TC ++K Q + HV S A + + + + Sbjct: 2272 STPDGTIKDRRLFTHHMSLEPVTCGPFCSSKERQETQSPHVTSPAQGLQSKEHPSRHSAV 2331 Query: 64 GSWRSSMSVPTVPMSRTE 11 G S S PTV R+E Sbjct: 2332 G---KSSSNPTVSALRSE 2346
>BNB_DROME (P29746) Protein bangles and beads| Length = 442 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/52 (34%), Positives = 24/52 (46%) Frame = -1 Query: 309 QAGRTQ*S*TVERQPCSKPAASQAPHQQYLIQAVQKQICGLPV*HAQRPQQP 154 + RT+ TVE QP + A QAP VQKQ+ +PQ+P Sbjct: 140 KTARTEAEPTVEAQPQATKAIEQAPEAPAANAEVQKQVV-----DEVKPQEP 186
>ATXR3_ARATH (O23372) Probable histone-lysine N-methyltransferase ATXR3 (EC| 2.1.1.43) (Trithorax-related protein 3) (TRX-related protein 3) (Protein SET DOMAIN GROUP 2) Length = 2351 Score = 27.3 bits (59), Expect = 9.4 Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Frame = -1 Query: 276 ERQPCSKPAASQAP-HQQYLIQAVQKQICGLPV*HAQRPQQPSRPKMQEL 130 E QP +KP+AS P ++ +++ ++K + +RP+QP + ++L Sbjct: 51 ESQPANKPSASSQPVKKKRIVKVIRKVV-------KRRPKQPQKQADEQL 93
>ATZA_PSESD (P72156) Atrazine chlorohydrolase (EC 3.8.1.8)| Length = 474 Score = 27.3 bits (59), Expect = 9.4 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 7/44 (15%) Frame = +3 Query: 81 ARGRIAVWKSATETTWVTL-------AFWDDLAVVASEHVKQGD 191 A GRI+VW + TT VT+ AF D AV+ + H+ + D Sbjct: 205 AGGRISVWPAPATTTAVTVEGMRWAQAFARDRAVMWTLHMAESD 248 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,772,051 Number of Sequences: 219361 Number of extensions: 763179 Number of successful extensions: 3100 Number of sequences better than 10.0: 169 Number of HSP's better than 10.0 without gapping: 2897 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3032 length of database: 80,573,946 effective HSP length: 94 effective length of database: 59,954,012 effective search space used: 1438896288 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
