| Clone Name | bags28p07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB089269.1| Triticum aestivum D31 mRNA for fructan exohydrolase, complete cds Length = 2319 Score = 702 bits (354), Expect = 0.0 Identities = 432/458 (94%) Strand = Plus / Plus Query: 2 cactgcagtgcacttcagggtttacaaatcacagcaaaagtacatgatcctcatgtgctc 61 |||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 1524 cactgcagtgcatttcagggtttacaaatcagagcaaaagtacattatcctcatgtgctc 1583 Query: 62 cgacctaagaaggtcttccctgagaccaggactgtacacaccagcctatggaggcttctt 121 ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1584 cgatcttagaaggtcttccctgagaccaggactgtacacaccagcctatggaggcttctt 1643 Query: 122 tgaatttgaccttgaaaaggaaagaaagatatccctcaggactctgattgataggtccgc 181 |||||||||||||||||| |||| || ||||||||||||||||||||| ||| |||| || Sbjct: 1644 tgaatttgaccttgaaaatgaaaaaaggatatccctcaggactctgatcgatcggtcggc 1703 Query: 182 cgtggagagcttcggcagcggtggcaggatctgcatcacggccagagtttatccggtggc 241 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1704 ggtggagagcttcggcagcggtggcaggatctgcatcacggccagagtttatccggtggc 1763 Query: 242 acttgtcgatgacggcgccacccacatgtatgctttcaacaatggaagtaccacggtcag 301 |||||||| |||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct: 1764 gcttgtcgacaacggcgccacccacatgtatgccttcaacaatggaagtaccacggtcgg 1823 Query: 302 agtgccgcaactaagggcatggagcatgaaaaaagcacaagtgaatgtgatgaagggtgg 361 |||||| || |||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 1824 agtgccacagctaagggcatggagcatgaagagagcacaagtgaatgtgatgaagggtgg 1883 Query: 362 aaatgtgatcgatgcttagcacaaaagagcaattctagtcagtcgtgtgattgaaagact 421 || |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 1884 aagtgtgatcgatgcttagcacagaagagcaattctagtcagacgtgtgattgaaagact 1943 Query: 422 ggccacgcacttgttcatttcaatatttaccatgtgta 459 ||||||||||||||| |||||||||||||||| ||||| Sbjct: 1944 ggccacgcacttgttgatttcaatatttaccacgtgta 1981 Score = 145 bits (73), Expect = 2e-31 Identities = 101/109 (92%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 461 ttgaacttttgaagtagtggcaattggtaagtaagactagtgcttgttgccaccaacgat 520 |||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||| Sbjct: 2097 ttgaacttttgaagtagttgcaattggtaagtaagcatagtgcttgttgccaacaacgat 2156 Query: 521 ttaaattcgcagaggtttggagtaaac-aatattagcttgtgcatgcca 568 ||||||||| ||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 2157 ttaaattcgtagaggtttggaataaacaaatatgagcttgtgcatgcca 2205
>dbj|AB089270.1| Triticum aestivum A211 mRNA for fructan exohydrolase, complete cds Length = 2039 Score = 327 bits (165), Expect = 2e-86 Identities = 298/340 (87%), Gaps = 3/340 (0%) Strand = Plus / Plus Query: 9 gtgcacttcagggtttacaaatcacagcaaaagtacatgatcctcatgtgctccgaccta 68 ||||||||||| ||||||||||||||| |||| |||||||||||||||||||| || ||| Sbjct: 1499 gtgcacttcagagtttacaaatcacagaaaaattacatgatcctcatgtgctctgatcta 1558 Query: 69 agaaggtcttccctgagaccaggactgtacacaccagcctatggaggcttctttgaattt 128 |||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 1559 agaaggtcttccctgacaccaggactggacacaccaacctatggaggcttctttgaattt 1618 Query: 129 gaccttgaaaaggaaagaaagatatccctcaggactctgattgataggtccgccgtggag 188 ||||||||||||||||| ||||| |||||||| |||||||||||| |||| || |||||| Sbjct: 1619 gaccttgaaaaggaaaggaagatctccctcagaactctgattgatcggtctgcggtggag 1678 Query: 189 agcttcggcagcggtggcaggatctgcatcacggccagagtttatccggtggcacttgtc 248 |||||||| | ||||||||| ||||||||| ||| |||||||| || ||| | |||||| Sbjct: 1679 agcttcggtggtggtggcagggtctgcatcatggctagagtttacccagtgtcgcttgtc 1738 Query: 249 gatgac-ggcgcca--cccacatgtatgctttcaacaatggaagtaccacggtcagagtg 305 || ||| ||||| ||||||||||||| || |||||||| ||| |||| ||||||||| Sbjct: 1739 gacgacaaccgccaaccccacatgtatgcctttaacaatggcagtgccacagtcagagtg 1798 Query: 306 ccgcaactaagggcatggagcatgaaaaaagcacaagtga 345 || || || ||||| |||||||||| | ||||||||||| Sbjct: 1799 cctcagctcagggcttggagcatgaggagagcacaagtga 1838 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 439 tttcaatatttaccatgtgtatttgaact 467 |||||||||||| |||| ||||||||||| Sbjct: 1912 tttcaatatttagcatgggtatttgaact 1940
>gb|DQ073968.1| Lolium perenne fructan exohydrolase mRNA, complete cds Length = 1716 Score = 327 bits (165), Expect = 2e-86 Identities = 288/329 (87%) Strand = Plus / Plus Query: 2 cactgcagtgcacttcagggtttacaaatcacagcaaaagtacatgatcctcatgtgctc 61 |||||| || |||||||| ||||||||||| ||||||| ||||||||||||||||| || Sbjct: 1368 cactgctgtacacttcagagtttacaaatcgcagcaaagctacatgatcctcatgtgttc 1427 Query: 62 cgacctaagaaggtcttccctgagaccaggactgtacacaccagcctatggaggcttctt 121 || | ||||||||||||||||||| ||||| ||||||||||||| |||||||||||||| Sbjct: 1428 tgatccaagaaggtcttccctgagatcaggaatgtacacaccagcatatggaggcttctt 1487 Query: 122 tgaatttgaccttgaaaaggaaagaaagatatccctcaggactctgattgataggtccgc 181 ||||||||||||| | ||||||||||||||||| || || |||||||||||| |||| || Sbjct: 1488 tgaatttgaccttcagaaggaaagaaagatatctctgagaactctgattgatcggtcagc 1547 Query: 182 cgtggagagcttcggcagcggtggcaggatctgcatcacggccagagtttatccggtggc 241 ||||||||||| || ||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 1548 ggtggagagctttggaggcggtggcagggtctgcatcatggccagagtttatccggtggt 1607 Query: 242 acttgtcgatgacggcgccacccacatgtatgctttcaacaatggaagtaccacggtcag 301 |||||||| || |||| |||||||||| || ||||||||||| |||||||| ||||| Sbjct: 1608 gcttgtcgacgatggcggggcccacatgtacgccttcaacaatggcagtaccacagtcag 1667 Query: 302 agtgccgcaactaagggcatggagcatga 330 ||||| || || |||||||||||||||| Sbjct: 1668 ggtgccacagctcagggcatggagcatga 1696
>dbj|AB089271.1| Triticum aestivum C311 mRNA for fructan exohydrolase, complete cds Length = 2044 Score = 287 bits (145), Expect = 2e-74 Identities = 293/340 (86%), Gaps = 3/340 (0%) Strand = Plus / Plus Query: 9 gtgcacttcagggtttacaaatcacagcaaaagtacatgatcctcatgtgctccgaccta 68 ||||||||||| || |||| ||||||| |||| || ||||||||||||||||| || ||| Sbjct: 1471 gtgcacttcagagtctacagatcacagaaaaattatatgatcctcatgtgctctgatcta 1530 Query: 69 agaaggtcttccctgagaccaggactgtacacaccagcctatggaggcttctttgaattt 128 |||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 1531 agaaggtcttccctgacaccaggactggacacaccggcctatggaggcttctttgaattt 1590 Query: 129 gaccttgaaaaggaaagaaagatatccctcaggactctgattgataggtccgccgtggag 188 ||||||||||||||||| ||||| || ||||| |||||||||||| |||| || |||||| Sbjct: 1591 gaccttgaaaaggaaaggaagatctctctcagaactctgattgatcggtctgcggtggag 1650 Query: 189 agcttcggcagcggtggcaggatctgcatcacggccagagtttatccggtggcacttgtc 248 |||||||| ||||||||||| ||||||||| ||| |||||||| || ||| |||||||| Sbjct: 1651 agcttcggtggcggtggcagggtctgcatcatggcgagagtttacccagtgtcacttgtc 1710 Query: 249 gatgacg-gcgcca--cccacatgtatgctttcaacaatggaagtaccacggtcagagtg 305 || |||| | ||| ||||||||||||| || |||||||| ||| | || |||||||| Sbjct: 1711 gacgacgaccaccagccccacatgtatgcctttaacaatggcagtgcaactgtcagagtt 1770 Query: 306 ccgcaactaagggcatggagcatgaaaaaagcacaagtga 345 || || || | ||| |||||||||| | ||||||||||| Sbjct: 1771 cctcacctcatggcgtggagcatgaggagagcacaagtga 1810 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 439 tttcaatatttaccatgtgtatttgaact 467 |||||||||||| |||| ||||||||||| Sbjct: 1884 tttcaatatttagcatgggtatttgaact 1912
>gb|AF030421.1| Triticum aestivum cell wall invertase (IVR3) mRNA, partial cds Length = 1563 Score = 278 bits (140), Expect = 2e-71 Identities = 287/336 (85%) Strand = Plus / Plus Query: 15 ttcagggtttacaaatcacagcaaaagtacatgatcctcatgtgctccgacctaagaagg 74 ||||| || ||||| |||||| ||||||||||| | ||||||||||| || ||||||||| Sbjct: 1063 ttcagagtctacaagtcacaggaaaagtacatggtactcatgtgctctgatctaagaagg 1122 Query: 75 tcttccctgagaccaggactgtacacaccagcctatggaggcttctttgaatttgacctt 134 |||||||||||||||| ||| | | |||||||||||||||||||||||||||||| ||| Sbjct: 1123 tcttccctgagaccagatctggagaaaccagcctatggaggcttctttgaatttgatctt 1182 Query: 135 gaaaaggaaagaaagatatccctcaggactctgattgataggtccgccgtggagagcttc 194 ||||||||||| |||||||| ||||| ||||||||||| |||| || ||||||| |||| Sbjct: 1183 gaaaaggaaaggaagatatcactcagaactctgattgaccggtcggcggtggagaacttc 1242 Query: 195 ggcagcggtggcaggatctgcatcacggccagagtttatccggtggcacttgtcgatgac 254 ||| ||||||||||| | |||||||| ||||||||||||||| || || | ||| | | Sbjct: 1243 ggcggcggtggcagggtttgcatcacatccagagtttatccggcggtgctcgccgacgtc 1302 Query: 255 ggcgccacccacatgtatgctttcaacaatggaagtaccacggtcagagtgccgcaacta 314 ||| ||||||| || |||||||||||||||||| |||||||||| ||||| || || Sbjct: 1303 ggcagggcccacatttacgctttcaacaatggaagtgccacggtcagggtgccacagctc 1362 Query: 315 agggcatggagcatgaaaaaagcacaagtgaatgtg 350 || ||||||| |||||| || ||||||||||||||| Sbjct: 1363 agcgcatggaccatgaagaaggcacaagtgaatgtg 1398
>emb|AJ516025.1|TAE516025 Triticum aestivum mRNA for fructan 1-exohydrolase w1 precursor (1-FEH w1 gene) Length = 2101 Score = 278 bits (140), Expect = 2e-71 Identities = 287/336 (85%) Strand = Plus / Plus Query: 15 ttcagggtttacaaatcacagcaaaagtacatgatcctcatgtgctccgacctaagaagg 74 ||||| || ||||| |||||| ||||||||||| | ||||||||||| || ||||||||| Sbjct: 1438 ttcagagtctacaagtcacaggaaaagtacatggtactcatgtgctctgatctaagaagg 1497 Query: 75 tcttccctgagaccaggactgtacacaccagcctatggaggcttctttgaatttgacctt 134 |||||||||||||||| ||| | | |||||||||||||||||||||||||||||| ||| Sbjct: 1498 tcttccctgagaccagatctggagaaaccagcctatggaggcttctttgaatttgatctt 1557 Query: 135 gaaaaggaaagaaagatatccctcaggactctgattgataggtccgccgtggagagcttc 194 ||||||||||| |||||||| ||||| ||||||||||| |||| || |||||||||||| Sbjct: 1558 gaaaaggaaaggaagatatcactcagaactctgattgaccggtcggcggtggagagcttc 1617 Query: 195 ggcagcggtggcaggatctgcatcacggccagagtttatccggtggcacttgtcgatgac 254 ||| ||||||||||| | |||||||| ||||||||||||||| || || | ||| | | Sbjct: 1618 ggcggcggtggcagggtttgcatcacatccagagtttatccggcggtgctcgccgacgtc 1677 Query: 255 ggcgccacccacatgtatgctttcaacaatggaagtaccacggtcagagtgccgcaacta 314 ||| ||||||| || |||||||||||||||||| |||||||||| ||||| || || Sbjct: 1678 ggcagggcccacatttacgctttcaacaatggaagtgccacggtcagggtgccacagctc 1737 Query: 315 agggcatggagcatgaaaaaagcacaagtgaatgtg 350 || ||||||| ||||| || ||||||||||||||| Sbjct: 1738 agcgcatggaccatgaggaaggcacaagtgaatgtg 1773
>emb|AJ564996.1|TAE564996 Triticum aestivum mRNA for fructan 1-exohydrolase w3 precursor (1-FEH w3 gene) Length = 2108 Score = 272 bits (137), Expect = 1e-69 Identities = 293/345 (84%) Strand = Plus / Plus Query: 15 ttcagggtttacaaatcacagcaaaagtacatgatcctcatgtgctccgacctaagaagg 74 ||||| || ||||| |||||| ||||||||||| | ||||||||||| || ||||||||| Sbjct: 1502 ttcagagtctacaagtcacaggaaaagtacatggtactcatgtgctctgatctaagaagg 1561 Query: 75 tcttccctgagaccaggactgtacacaccagcctatggaggcttctttgaatttgacctt 134 |||||||||||||||| ||| | | |||||||||||||||||||||||||||||| ||| Sbjct: 1562 tcttccctgagaccagatctggagaaaccagcctatggaggcttctttgaatttgatctt 1621 Query: 135 gaaaaggaaagaaagatatccctcaggactctgattgataggtccgccgtggagagcttc 194 ||||||||||| |||||||| ||||| ||||||||||| |||| || |||||||||||| Sbjct: 1622 gaaaaggaaaggaagatatcactcagaactctgattgaccggtcggcggtggagagcttc 1681 Query: 195 ggcagcggtggcaggatctgcatcacggccagagtttatccggtggcacttgtcgatgac 254 || ||||||||||| | |||||||| ||||||||||||||| || || | ||| | | Sbjct: 1682 ggtggcggtggcagggtttgcatcacatccagagtttatccggcggtgctggccgacgtc 1741 Query: 255 ggcgccacccacatgtatgctttcaacaatggaagtaccacggtcagagtgccgcaacta 314 ||| ||||||| || |||||||||||||||||| |||||||||| ||||| || || Sbjct: 1742 ggcagtgcccacatttacgctttcaacaatggaagtgccacggtcagggtgccacagctc 1801 Query: 315 agggcatggagcatgaaaaaagcacaagtgaatgtgatgaagggt 359 || ||||||| ||||| || ||||||||||||||| ||||||| Sbjct: 1802 agcgcatggaccatgaggaaggcacaagtgaatgtggagaagggt 1846
>emb|AJ508387.1|TAE508387 Triticum aestivum mRNA for fructan 1-exohydrolase (1-FEH gene) Length = 2225 Score = 264 bits (133), Expect = 3e-67 Identities = 292/345 (84%) Strand = Plus / Plus Query: 15 ttcagggtttacaaatcacagcaaaagtacatgatcctcatgtgctccgacctaagaagg 74 ||||| || ||||| |||||| ||||||||||| | ||||||||||| || ||||||||| Sbjct: 1644 ttcagagtctacaagtcacaggaaaagtacatggtactcatgtgctctgatctaagaagg 1703 Query: 75 tcttccctgagaccaggactgtacacaccagcctatggaggcttctttgaatttgacctt 134 |||||||||||||||| ||| | | |||||||||||||||||||||||||||||| ||| Sbjct: 1704 tcttccctgagaccagatctggagaaaccagcctatggaggcttctttgaatttgatctt 1763 Query: 135 gaaaaggaaagaaagatatccctcaggactctgattgataggtccgccgtggagagcttc 194 ||||||||||| |||||||| ||||| ||||||||||| |||| || |||||||||||| Sbjct: 1764 gaaaaggaaaggaagatatcactcagaactctgattgaccggtcggcagtggagagcttc 1823 Query: 195 ggcagcggtggcaggatctgcatcacggccagagtttatccggtggcacttgtcgatgac 254 || ||||||||||| | |||||||| ||||||||||||||| || || | ||| | | Sbjct: 1824 ggtggcggtggcagggtttgcatcacatccagagtttatccggcggtgctcgccgacgtc 1883 Query: 255 ggcgccacccacatgtatgctttcaacaatggaagtaccacggtcagagtgccgcaacta 314 ||| ||||||| || || ||||||||||||||| |||||||||| ||||| || || Sbjct: 1884 ggcagggcccacatttacgcattcaacaatggaagtgccacggtcagggtgccacagctc 1943 Query: 315 agggcatggagcatgaaaaaagcacaagtgaatgtgatgaagggt 359 || ||||||| ||||| || ||||||||||||||| ||||||| Sbjct: 1944 agcgcatggaccatgaggaaggcacaagtgaatgtggagaagggt 1988
>gb|AY693396.2| Lolium perenne putative fructan 1-exohydrolase precursor, mRNA, partial cds Length = 989 Score = 254 bits (128), Expect = 3e-64 Identities = 269/316 (85%) Strand = Plus / Plus Query: 9 gtgcacttcagggtttacaaatcacagcaaaagtacatgatcctcatgtgctccgaccta 68 ||||||||||| || |||||||||||| || |||||||| | ||||||||||| || || Sbjct: 670 gtgcacttcagagtctacaaatcacagaaagagtacatggtactcatgtgctctgatata 729 Query: 69 agaaggtcttccctgagaccaggactgtacacaccagcctatggaggcttctttgaattt 128 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 730 agaaggtcttccctgagacaaggactgtacacaccagcctatggaggcttctttgaattc 789 Query: 129 gaccttgaaaaggaaagaaagatatccctcaggactctgattgataggtccgccgtggag 188 || |||||||||||||| |||||||| || || ||||| |||||| |||| ||||||||| Sbjct: 790 gatcttgaaaaggaaaggaagatatctctgagaactctaattgatcggtcggccgtggag 849 Query: 189 agcttcggcagcggtggcaggatctgcatcacggccagagtttatccggtggcacttgtc 248 || || || ||||||| ||| || | |||| || ||||||||||| ||||| |||| Sbjct: 850 agttttggtggcggtggtagggtcagtatcatagctagagtttatccagtggcgattgtg 909 Query: 249 gatgacggcgccacccacatgtatgctttcaacaatggaagtaccacggtcagagtgccg 308 ||||| || ||||||||||||| |||||||||||||||||||||||| | ||||| Sbjct: 910 gatgaagggagggcccacatgtatgccttcaacaatggaagtaccacggtctgggtgcca 969 Query: 309 caactaagggcatgga 324 || || || ||||||| Sbjct: 970 cagctcagcgcatgga 985
>gb|AY578161.1| Oryza sativa (japonica cultivar-group) cell-wall invertase 4 mRNA, complete cds Length = 2042 Score = 222 bits (112), Expect = 1e-54 Identities = 270/322 (83%), Gaps = 3/322 (0%) Strand = Plus / Plus Query: 9 gtgcacttcagggtttacaaatcacagcaaaagtacatgatcctcatgtgctccgaccta 68 |||||||||||||||||||||||| |||| ||||||||| | ||| ||||||| || || Sbjct: 1479 gtgcacttcagggtttacaaatcagagcagaagtacatggttctcctgtgctctgatctg 1538 Query: 69 agaaggtcttccctgagaccaggactgtacacaccagcctatggaggcttctttgaattt 128 ||||| || || ||||||||||||||||||||||||| ||||||||||||||||||| | Sbjct: 1539 agaagatcatcgttgagaccaggactgtacacaccagcatatggaggcttctttgaatat 1598 Query: 129 gaccttgaaaaggaaagaaagatatccctcaggactctgattgataggtccgccgtggag 188 |||||||||||||| | ||||| ||| | || |||||||| || |||| || |||||| Sbjct: 1599 gaccttgaaaaggagaagaagatctccttgagaactctgatcgaccggtcggcggtggag 1658 Query: 189 agcttcggcagcggtggcaggatctgcatcacggccagagtttatccggtggcacttgtc 248 ||||||||| |||| |||||| ||||||| ||||||||| || |||| ||| ||| Sbjct: 1659 agcttcggcggcggcggcagggcgtgcatcatggccagagtgtacccggcggc---ggtc 1715 Query: 249 gatgacggcgccacccacatgtatgctttcaacaatggaagtaccacggtcagagtgccg 308 | |||||||||||||||||||| || ||||||||||| |||| |||||| | ||| || Sbjct: 1716 gtcgacggcgccacccacatgtacgccttcaacaatggcagtagcacggtgaaggtgtcg 1775 Query: 309 caactaagggcatggagcatga 330 || || | |||||||||||||| Sbjct: 1776 cagctcaaggcatggagcatga 1797
>dbj|AK067444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099F12, full insert sequence Length = 2100 Score = 222 bits (112), Expect = 1e-54 Identities = 270/322 (83%), Gaps = 3/322 (0%) Strand = Plus / Plus Query: 9 gtgcacttcagggtttacaaatcacagcaaaagtacatgatcctcatgtgctccgaccta 68 |||||||||||||||||||||||| |||| ||||||||| | ||| ||||||| || || Sbjct: 1537 gtgcacttcagggtttacaaatcagagcagaagtacatggttctcctgtgctctgatctg 1596 Query: 69 agaaggtcttccctgagaccaggactgtacacaccagcctatggaggcttctttgaattt 128 ||||| || || ||||||||||||||||||||||||| ||||||||||||||||||| | Sbjct: 1597 agaagatcatcgttgagaccaggactgtacacaccagcatatggaggcttctttgaatat 1656 Query: 129 gaccttgaaaaggaaagaaagatatccctcaggactctgattgataggtccgccgtggag 188 |||||||||||||| | ||||| ||| | || |||||||| || |||| || |||||| Sbjct: 1657 gaccttgaaaaggagaagaagatctccttgagaactctgatcgaccggtcggcggtggag 1716 Query: 189 agcttcggcagcggtggcaggatctgcatcacggccagagtttatccggtggcacttgtc 248 ||||||||| |||| |||||| ||||||| ||||||||| || |||| ||| ||| Sbjct: 1717 agcttcggcggcggcggcagggcgtgcatcatggccagagtgtacccggcggc---ggtc 1773 Query: 249 gatgacggcgccacccacatgtatgctttcaacaatggaagtaccacggtcagagtgccg 308 | |||||||||||||||||||| || ||||||||||| |||| |||||| | ||| || Sbjct: 1774 gtcgacggcgccacccacatgtacgccttcaacaatggcagtagcacggtgaaggtgtcg 1833 Query: 309 caactaagggcatggagcatga 330 || || | |||||||||||||| Sbjct: 1834 cagctcaaggcatggagcatga 1855
>dbj|AK061744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F09, full insert sequence Length = 1318 Score = 222 bits (112), Expect = 1e-54 Identities = 270/322 (83%), Gaps = 3/322 (0%) Strand = Plus / Plus Query: 9 gtgcacttcagggtttacaaatcacagcaaaagtacatgatcctcatgtgctccgaccta 68 |||||||||||||||||||||||| |||| ||||||||| | ||| ||||||| || || Sbjct: 741 gtgcacttcagggtttacaaatcagagcagaagtacatggttctcctgtgctctgatctg 800 Query: 69 agaaggtcttccctgagaccaggactgtacacaccagcctatggaggcttctttgaattt 128 ||||| || || ||||||||||||||||||||||||| ||||||||||||||||||| | Sbjct: 801 agaagatcatcgttgagaccaggactgtacacaccagcatatggaggcttctttgaatat 860 Query: 129 gaccttgaaaaggaaagaaagatatccctcaggactctgattgataggtccgccgtggag 188 |||||||||||||| | ||||| ||| | || |||||||| || |||| || |||||| Sbjct: 861 gaccttgaaaaggagaagaagatctccttgagaactctgatcgaccggtcggcggtggag 920 Query: 189 agcttcggcagcggtggcaggatctgcatcacggccagagtttatccggtggcacttgtc 248 ||||||||| |||| |||||| ||||||| ||||||||| || |||| ||| ||| Sbjct: 921 agcttcggcggcggcggcagggcgtgcatcatggccagagtgtacccggcggc---ggtc 977 Query: 249 gatgacggcgccacccacatgtatgctttcaacaatggaagtaccacggtcagagtgccg 308 | |||||||||||||||||||| || ||||||||||| |||| |||||| | ||| || Sbjct: 978 gtcgacggcgccacccacatgtacgccttcaacaatggcagtagcacggtgaaggtgtcg 1037 Query: 309 caactaagggcatggagcatga 330 || || | |||||||||||||| Sbjct: 1038 cagctcaaggcatggagcatga 1059
>emb|AJ605333.1| Hordeum vulgare mRNA for fructan 1-exohydrolase precursor (1-feh gene) Length = 1994 Score = 220 bits (111), Expect = 4e-54 Identities = 195/223 (87%) Strand = Plus / Plus Query: 15 ttcagggtttacaaatcacagcaaaagtacatgatcctcatgtgctccgacctaagaagg 74 ||||| || ||||| |||||| ||||||||||| | ||||||||||| |||||||||||| Sbjct: 1476 ttcagagtgtacaagtcacaggaaaagtacatggtactcatgtgctctgacctaagaagg 1535 Query: 75 tcttccctgagaccaggactgtacacaccagcctatggaggcttctttgaatttgacctt 134 ||||||||||||||||||||| | | |||||||||||||||||||||||||||||| ||| Sbjct: 1536 tcttccctgagaccaggactggagaaaccagcctatggaggcttctttgaatttgatctt 1595 Query: 135 gaaaaggaaagaaagatatccctcaggactctgattgataggtccgccgtggagagcttc 194 | ||||||||| |||||||| ||||| || |||||||| |||| || |||||||||||| Sbjct: 1596 gcaaaggaaaggaagatatcactcagaaccctgattgaccggtcggcggtggagagcttc 1655 Query: 195 ggcagcggtggcaggatctgcatcacggccagagtttatccgg 237 || |||| || ||| | |||||||| ||||||||||||||| Sbjct: 1656 ggtggcgggggtagggtttgcatcacatccagagtttatccgg 1698 Score = 56.0 bits (28), Expect = 1e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 264 cacatgtatgctttcaacaatggaagtaccacggtcagagtgccgcaactaagggcatgg 323 ||||| || ||||||||||| |||| | ||| |||||| ||||| || || || |||||| Sbjct: 1725 cacatttacgctttcaacaacggaaatgccatggtcagggtgccacagctcagcgcatgg 1784 Query: 324 agcatgaaaaaagcacaagtgaatgtgatgaagggt 359 | ||||| || ||||||||||||||| ||||||| Sbjct: 1785 accatgaggaaggcacaagtgaatgtggagaagggt 1820
>gb|AY575552.1| Oryza sativa (indica cultivar-group) cultivar IR64 cell wall invertase 5 mRNA, partial cds Length = 506 Score = 214 bits (108), Expect = 2e-52 Identities = 269/322 (83%), Gaps = 3/322 (0%) Strand = Plus / Plus Query: 9 gtgcacttcagggtttacaaatcacagcaaaagtacatgatcctcatgtgctccgaccta 68 |||||||||||||||||||||||| |||| ||||||||| ||| ||||||| || || Sbjct: 118 gtgcacttcagggtttacaaatcagagcagaagtacatggctctcctgtgctctgatctg 177 Query: 69 agaaggtcttccctgagaccaggactgtacacaccagcctatggaggcttctttgaattt 128 ||||| || || ||||||||||||||||||||||||| ||||||||||||||||||| | Sbjct: 178 agaagatcatcgttgagaccaggactgtacacaccagcatatggaggcttctttgaatat 237 Query: 129 gaccttgaaaaggaaagaaagatatccctcaggactctgattgataggtccgccgtggag 188 |||||||||||||| | ||||| ||| | || |||||||| || |||| || |||||| Sbjct: 238 gaccttgaaaaggagaagaagatctccttgagaactctgatcgaccggtcggcggtggag 297 Query: 189 agcttcggcagcggtggcaggatctgcatcacggccagagtttatccggtggcacttgtc 248 ||||||||| |||| |||||| ||||||| ||||||||| || |||| ||| ||| Sbjct: 298 agcttcggcggcggcggcagggcgtgcatcatggccagagtgtacccggcggc---ggtc 354 Query: 249 gatgacggcgccacccacatgtatgctttcaacaatggaagtaccacggtcagagtgccg 308 | |||||||||||||||||||| || ||||||||||| |||| |||||| | ||| || Sbjct: 355 gtcgacggcgccacccacatgtacgccttcaacaatggcagtagcacggtgaaggtgtcg 414 Query: 309 caactaagggcatggagcatga 330 || || | |||||||||||||| Sbjct: 415 cagctcaaggcatggagcatga 436
>dbj|AB154521.1| Oryza sativa (japonica cultivar-group) OsCIN4 mRNA for cell wall invertase, complete cds Length = 2068 Score = 214 bits (108), Expect = 2e-52 Identities = 269/322 (83%), Gaps = 3/322 (0%) Strand = Plus / Plus Query: 9 gtgcacttcagggtttacaaatcacagcaaaagtacatgatcctcatgtgctccgaccta 68 |||||||||||||||||||||||| |||| ||||||||| | ||| ||||||| || || Sbjct: 1473 gtgcacttcagggtttacaaatcagagcagaagtacatggttctcctgtgctctgatctg 1532 Query: 69 agaaggtcttccctgagaccaggactgtacacaccagcctatggaggcttctttgaattt 128 ||||| || || ||||||||||||||||||||||||| ||||||||||||||||||| | Sbjct: 1533 agaagatcatcgttgagaccaggactgtacacaccagcatatggaggcttctttgaatat 1592 Query: 129 gaccttgaaaaggaaagaaagatatccctcaggactctgattgataggtccgccgtggag 188 ||||| |||||||| | ||||| ||| | || |||||||| || |||| || |||||| Sbjct: 1593 gacctcgaaaaggagaagaagatctccttgagaactctgatcgaccggtcggcggtggag 1652 Query: 189 agcttcggcagcggtggcaggatctgcatcacggccagagtttatccggtggcacttgtc 248 ||||||||| |||| |||||| ||||||| ||||||||| || |||| ||| ||| Sbjct: 1653 agcttcggcggcggcggcagggcgtgcatcatggccagagtgtacccggcggc---ggtc 1709 Query: 249 gatgacggcgccacccacatgtatgctttcaacaatggaagtaccacggtcagagtgccg 308 | |||||||||||||||||||| || ||||||||||| |||| |||||| | ||| || Sbjct: 1710 gtcgacggcgccacccacatgtacgccttcaacaatggcagtagcacggtgaaggtgtcg 1769 Query: 309 caactaagggcatggagcatga 330 || || | |||||||||||||| Sbjct: 1770 cagctcaaggcatggagcatga 1791
>ref|NM_189408.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1389 Score = 145 bits (73), Expect = 2e-31 Identities = 206/249 (82%), Gaps = 6/249 (2%) Strand = Plus / Plus Query: 82 tgagaccaggactgtacacaccagcctatggaggcttctttgaatttgaccttgaaaagg 141 ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 1115 tgagaccaggactgtacacaccagcatatggaggcttctttgaatatgaccttgaaaagg 1174 Query: 142 aaagaaagatatccctcaggactctgattgataggtccgccgtggagagcttcggcagcg 201 | | ||||| ||| | || |||| | || |||| || ||||||||||||||| ||| Sbjct: 1175 agaagaagatctccttgagaactc---tcgaccggtcggcggtggagagcttcggcggcg 1231 Query: 202 gtggcaggatctgcatcacggccagagtttatccggtggcacttgtcgatgacggcgcca 261 | |||||| ||||||| ||||||||| || |||| ||| |||| |||||||||| Sbjct: 1232 gcggcagggcgtgcatcatggccagagtgtacccggcggc---ggtcgtcgacggcgcca 1288 Query: 262 cccacatgtatgctttcaacaatggaagtaccacggtcagagtgccgcaactaagggcat 321 |||||||||| || ||||||||||| |||| |||||| | ||| |||| || | ||||| Sbjct: 1289 cccacatgtacgccttcaacaatggcagtagcacggtgaaggtgtcgcagctcaaggcat 1348 Query: 322 ggagcatga 330 ||||||||| Sbjct: 1349 ggagcatga 1357 Score = 69.9 bits (35), Expect = 9e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 9 gtgcacttcagggtttacaaatcacagcaaaagtacatgatcctcatgtgctccgaccta 68 |||||||||||||||||||||||| |||| ||||||||| | ||| ||||||| || || Sbjct: 1030 gtgcacttcagggtttacaaatcagagcagaagtacatggttctcctgtgctctgatctg 1089 Query: 69 agaaggt 75 ||||||| Sbjct: 1090 agaaggt 1096
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 105 bits (53), Expect = 2e-19 Identities = 59/61 (96%) Strand = Plus / Plus Query: 82 tgagaccaggactgtacacaccagcctatggaggcttctttgaatttgaccttgaaaagg 141 ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 42622115 tgagaccaggactgtacacaccagcatatggaggcttctttgaatatgaccttgaaaagg 42622174 Query: 142 a 142 | Sbjct: 42622175 a 42622175 Score = 83.8 bits (42), Expect = 6e-13 Identities = 122/148 (82%), Gaps = 3/148 (2%) Strand = Plus / Plus Query: 183 gtggagagcttcggcagcggtggcaggatctgcatcacggccagagtttatccggtggca 242 ||||||||||||||| |||| |||||| ||||||| ||||||||| || |||| ||| Sbjct: 42622321 gtggagagcttcggcggcggcggcagggcgtgcatcatggccagagtgtacccggcggc- 42622379 Query: 243 cttgtcgatgacggcgccacccacatgtatgctttcaacaatggaagtaccacggtcaga 302 |||| |||||||||||||||||||| || ||||||||||| |||| |||||| | Sbjct: 42622380 --ggtcgtcgacggcgccacccacatgtacgccttcaacaatggcagtagcacggtgaag 42622437 Query: 303 gtgccgcaactaagggcatggagcatga 330 ||| |||| || | |||||||||||||| Sbjct: 42622438 gtgtcgcagctcaaggcatggagcatga 42622465 Score = 69.9 bits (35), Expect = 9e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 9 gtgcacttcagggtttacaaatcacagcaaaagtacatgatcctcatgtgctccgaccta 68 |||||||||||||||||||||||| |||| ||||||||| | ||| ||||||| || || Sbjct: 42621833 gtgcacttcagggtttacaaatcagagcagaagtacatggttctcctgtgctctgatctg 42621892 Query: 69 agaaggt 75 ||||||| Sbjct: 42621893 agaaggt 42621899
>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0458E05 Length = 193577 Score = 105 bits (53), Expect = 2e-19 Identities = 59/61 (96%) Strand = Plus / Plus Query: 82 tgagaccaggactgtacacaccagcctatggaggcttctttgaatttgaccttgaaaagg 141 ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 142998 tgagaccaggactgtacacaccagcatatggaggcttctttgaatatgaccttgaaaagg 143057 Query: 142 a 142 | Sbjct: 143058 a 143058 Score = 83.8 bits (42), Expect = 6e-13 Identities = 122/148 (82%), Gaps = 3/148 (2%) Strand = Plus / Plus Query: 183 gtggagagcttcggcagcggtggcaggatctgcatcacggccagagtttatccggtggca 242 ||||||||||||||| |||| |||||| ||||||| ||||||||| || |||| ||| Sbjct: 143204 gtggagagcttcggcggcggcggcagggcgtgcatcatggccagagtgtacccggcggc- 143262 Query: 243 cttgtcgatgacggcgccacccacatgtatgctttcaacaatggaagtaccacggtcaga 302 |||| |||||||||||||||||||| || ||||||||||| |||| |||||| | Sbjct: 143263 --ggtcgtcgacggcgccacccacatgtacgccttcaacaatggcagtagcacggtgaag 143320 Query: 303 gtgccgcaactaagggcatggagcatga 330 ||| |||| || | |||||||||||||| Sbjct: 143321 gtgtcgcagctcaaggcatggagcatga 143348 Score = 69.9 bits (35), Expect = 9e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 9 gtgcacttcagggtttacaaatcacagcaaaagtacatgatcctcatgtgctccgaccta 68 |||||||||||||||||||||||| |||| ||||||||| | ||| ||||||| || || Sbjct: 142716 gtgcacttcagggtttacaaatcagagcagaagtacatggttctcctgtgctctgatctg 142775 Query: 69 agaaggt 75 ||||||| Sbjct: 142776 agaaggt 142782
>gb|AY106676.1| Zea mays PCO093097 mRNA sequence Length = 1020 Score = 73.8 bits (37), Expect = 6e-10 Identities = 103/125 (82%) Strand = Plus / Plus Query: 183 gtggagagcttcggcagcggtggcaggatctgcatcacggccagagtttatccggtggca 242 |||||||||||||| | || |||||| | ||||||| |||||| || ||||||| ||| Sbjct: 702 gtggagagcttcggtggaggcggcagggtgtgcatcatggccagggtctatccggcggcg 761 Query: 243 cttgtcgatgacggcgccacccacatgtatgctttcaacaatggaagtaccacggtcaga 302 || ||||| ||||||| ||| | |||||| || ||||||||||| | || ||| |||||| Sbjct: 762 ctcgtcgacgacggcggcactcgcatgtacgcgttcaacaatggcactagcaccgtcaga 821 Query: 303 gtgcc 307 ||||| Sbjct: 822 gtgcc 826
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/57 (89%), Gaps = 4/57 (7%) Strand = Plus / Minus Query: 82 tgagaccaggactgtacacac--cagcctat--ggaggcttctttgaatttgacctt 134 ||||||||||||||||||||| |||| ||| |||||||||||||||| ||||||| Sbjct: 4732290 tgagaccaggactgtacacacaccagcatatatggaggcttctttgaatatgacctt 4732234 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 gtggagagcttcggcagcgg 202 |||||||||||||||||||| Sbjct: 4732074 gtggagagcttcggcagcgg 4732055
>dbj|AP004000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_B01 Length = 129329 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/57 (89%), Gaps = 4/57 (7%) Strand = Plus / Minus Query: 82 tgagaccaggactgtacacac--cagcctat--ggaggcttctttgaatttgacctt 134 ||||||||||||||||||||| |||| ||| |||||||||||||||| ||||||| Sbjct: 12880 tgagaccaggactgtacacacaccagcatatatggaggcttctttgaatatgacctt 12824 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 gtggagagcttcggcagcgg 202 |||||||||||||||||||| Sbjct: 12664 gtggagagcttcggcagcgg 12645
>ref|XM_464363.1| Oryza sativa (japonica cultivar-group), mRNA Length = 297 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 108 tatggaggcttctttgaatttgacctt 134 ||||||||||||||||||| ||||||| Sbjct: 249 tatggaggcttctttgaatatgacctt 223 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 gtggagagcttcggcagcgg 202 |||||||||||||||||||| Sbjct: 119 gtggagagcttcggcagcgg 100
>gb|AC164883.5| Mus musculus BAC clone RP23-88A20 from chromosome 15, complete sequence Length = 260402 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 453 atgtgtatttgaacttttgaa 473 ||||||||||||||||||||| Sbjct: 154806 atgtgtatttgaacttttgaa 154826
>gb|BC026150.1| Mus musculus frizzled homolog 6 (Drosophila), mRNA (cDNA clone MGC:14004 IMAGE:3983985), complete cds Length = 4089 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 453 atgtgtatttgaacttttgaa 473 ||||||||||||||||||||| Sbjct: 3140 atgtgtatttgaacttttgaa 3160
>gb|AC164304.2| Mus musculus BAC clone RP23-261B24 from chromosome 14, complete sequence Length = 184690 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 125 atttgaccttgaaaaggaaagaaag 149 |||||||||| |||||||||||||| Sbjct: 108751 atttgaccttaaaaaggaaagaaag 108775
>gb|AC165352.2| Mus musculus BAC clone RP23-205C7 from chromosome 15, complete sequence Length = 202977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 453 atgtgtatttgaacttttgaa 473 ||||||||||||||||||||| Sbjct: 157168 atgtgtatttgaacttttgaa 157148
>gb|AC122418.4| Mus musculus BAC clone RP24-159E6 from chromosome 13, complete sequence Length = 221980 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 456 tgtatttgaacttttgaagta 476 ||||||||||||||||||||| Sbjct: 58294 tgtatttgaacttttgaagta 58314
>ref|NM_008056.2| Mus musculus frizzled homolog 6 (Drosophila) (Fzd6), mRNA Length = 4089 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 453 atgtgtatttgaacttttgaa 473 ||||||||||||||||||||| Sbjct: 3140 atgtgtatttgaacttttgaa 3160
>gb|AC127357.5| Mus musculus BAC clone RP23-103P11 from chromosome 3, complete sequence Length = 220032 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 ccttgaaaaggaaagaaagat 151 ||||||||||||||||||||| Sbjct: 159949 ccttgaaaaggaaagaaagat 159969
>gb|AC146750.32| Medicago truncatula clone mth2-16o6, complete sequence Length = 114206 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 tttgaccttgaaaaggaaaga 146 ||||||||||||||||||||| Sbjct: 27698 tttgaccttgaaaaggaaaga 27718
>dbj|AK143186.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130303E12 product:activin receptor IIA, full insert sequence Length = 5234 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 ccttgaaaaggaaagaaagat 151 ||||||||||||||||||||| Sbjct: 893 ccttgaaaaggaaagaaagat 913
>dbj|AK138964.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530031H21 product:frizzled homolog 6 (Drosophila), full insert sequence Length = 2679 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 453 atgtgtatttgaacttttgaa 473 ||||||||||||||||||||| Sbjct: 1864 atgtgtatttgaacttttgaa 1884
>dbj|AK088399.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430014N03 product:FRIZZLED 6 PRECURSOR (FRIZZLED-6) (FZ-6) (MFZ6), full insert sequence Length = 3948 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 453 atgtgtatttgaacttttgaa 473 ||||||||||||||||||||| Sbjct: 3016 atgtgtatttgaacttttgaa 3036
>ref|XM_311276.1| Anopheles gambiae str. PEST ENSANGP00000022414 (ENSANGG00000020585), partial mRNA Length = 513 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 188 gagcttcggcagcggtggcag 208 ||||||||||||||||||||| Sbjct: 165 gagcttcggcagcggtggcag 145
>gb|AC099692.4| Mus musculus chromosome 13, clone RP23-198N22, complete sequence Length = 216362 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 456 tgtatttgaacttttgaagta 476 ||||||||||||||||||||| Sbjct: 118938 tgtatttgaacttttgaagta 118958
>gb|AC131658.3| Mus musculus BAC clone RP23-239F24 from 3, complete sequence Length = 200955 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 ccttgaaaaggaaagaaagat 151 ||||||||||||||||||||| Sbjct: 42477 ccttgaaaaggaaagaaagat 42497
>emb|AL732317.13| Mouse DNA sequence from clone RP23-139F8 on chromosome 2, complete sequence Length = 222471 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 ccttgaaaaggaaagaaagat 151 ||||||||||||||||||||| Sbjct: 147079 ccttgaaaaggaaagaaagat 147099
>gb|AC125019.6| Mus musculus chromosome 19, clone RP24-158H8, complete sequence Length = 162617 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 440 ttcaatatttaccatgtgtatttg 463 |||||||||||||||||| ||||| Sbjct: 95443 ttcaatatttaccatgtgcatttg 95466
>emb|AL445239.8| Human DNA sequence from clone RP11-540L11 on chromosome X Contains the 3' end of the CASK gene for calcium/calmodulin-dependent serine protein kinase (MAGUK family) and a novel gene, complete sequence Length = 75677 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aaaggaaagaaagatatccc 156 |||||||||||||||||||| Sbjct: 22759 aaaggaaagaaagatatccc 22778
>emb|AL355358.9| Human DNA sequence from clone RP11-536L15 on chromosome 6 Contains a ribosomal protein S29 (RPS29) pseudogene, complete sequence Length = 141825 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 tagtggcaattggtaagtaa 494 |||||||||||||||||||| Sbjct: 98530 tagtggcaattggtaagtaa 98549
>gb|BC035990.1| Homo sapiens, similar to calcium/calmodulin-dependent serine protein kinase, clone IMAGE:4334367, mRNA Length = 2040 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aaaggaaagaaagatatccc 156 |||||||||||||||||||| Sbjct: 1258 aaaggaaagaaagatatccc 1239
>dbj|AB236427.1| Pyrus communis Sd-RNase gene for Sd-RNase, complete cds Length = 1020 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 459 atttgaacttttgaagtagt 478 |||||||||||||||||||| Sbjct: 42 atttgaacttttgaagtagt 23
>gb|AC078871.16| Homo sapiens 12q BAC RP11-919C7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 119238 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gaaaaggaaagaaagatatc 154 |||||||||||||||||||| Sbjct: 34100 gaaaaggaaagaaagatatc 34119
>gb|AC062031.7| Homo sapiens BAC clone RP11-474G7 from 2, complete sequence Length = 172792 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gacctaagaaggtcttccct 82 |||||||||||||||||||| Sbjct: 149660 gacctaagaaggtcttccct 149679
>gb|AF262405.1|AF262405 Homo sapiens clone phi9 calcium/calmodulin-dependent serine protein kinase membrane-associated guanylate kinase (CASK) mRNA, partial cds Length = 3460 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aaaggaaagaaagatatccc 156 |||||||||||||||||||| Sbjct: 3076 aaaggaaagaaagatatccc 3057
>gb|AF262404.1|AF262404 Homo sapiens clone phi7 calcium/calmodulin-dependent serine protein kinase membrane-associated guanylate kinase (CASK) mRNA, partial cds Length = 3111 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aaaggaaagaaagatatccc 156 |||||||||||||||||||| Sbjct: 2727 aaaggaaagaaagatatccc 2708
>dbj|AB013388.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19E1 Length = 73428 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 ttcatttcaatatttaccat 454 |||||||||||||||||||| Sbjct: 69796 ttcatttcaatatttaccat 69777
>emb|AJ534447.1|HVU534447 Hordeum vulgare mRNA for apoplastic invertase 1 (cwinw1 gene) Length = 2095 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 165 ctgattgataggtccgccgtggagagcttcgg 196 ||||| ||| |||||| ||||||||||||||| Sbjct: 1644 ctgatcgatcggtccgtcgtggagagcttcgg 1675
>emb|BX537337.9| Zebrafish DNA sequence from clone CH211-222E23 in linkage group 19, complete sequence Length = 217375 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 aatatttaccatgtgtattt 462 |||||||||||||||||||| Sbjct: 201633 aatatttaccatgtgtattt 201652
>gb|AC006197.1|AC006197 Homo sapiens, clone hRPK.2_A_1, complete sequence Length = 154354 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gaaaaggaaagaaagatatc 154 |||||||||||||||||||| Sbjct: 94952 gaaaaggaaagaaagatatc 94971
>gb|AC005224.1|AC005224 Homo sapiens chromosome 17, clone hRPK.214_O_1, complete sequence Length = 166687 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 125 atttgaccttgaaaaggaaagaaa 148 ||||| |||||||||||||||||| Sbjct: 64343 atttgtccttgaaaaggaaagaaa 64320
>gb|AF035582.1|AF035582 Homo sapiens CASK mRNA, complete cds Length = 3937 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aaaggaaagaaagatatccc 156 |||||||||||||||||||| Sbjct: 3169 aaaggaaagaaagatatccc 3150
>dbj|AB208859.1| Homo sapiens mRNA for calcium/calmodulin-dependent serine protein kinase (MAGUK family) variant protein Length = 3965 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aaaggaaagaaagatatccc 156 |||||||||||||||||||| Sbjct: 3216 aaaggaaagaaagatatccc 3197
>dbj|AB039327.2| Homo sapiens CASK mRNA for calcium/calmodulin-dependent serine protein kinase, complete cds Length = 2810 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aaaggaaagaaagatatccc 156 |||||||||||||||||||| Sbjct: 2376 aaaggaaagaaagatatccc 2357 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,218,099 Number of Sequences: 3902068 Number of extensions: 5218099 Number of successful extensions: 118201 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 54 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 118031 Number of HSP's gapped (non-prelim): 162 length of query: 568 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 545 effective length of database: 17,143,297,704 effective search space: 9343097248680 effective search space used: 9343097248680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)