ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags29d03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U81318.1|TAU81318 Triticum aestivum poly(A)-binding protein (wheatpab) mRNA, complete cds Length = 2237 Score = 1098 bits (554), Expect = 0.0 Identities = 620/642 (96%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcggcgtcgtcgttcccggccacgtcgctgtacgtggg 61 ||||||||||||||||||||||||||| |||||||||||||| || ||||| |||||||| Sbjct: 114 ggcggccgctgcggctgcggcggcggcatcgtcgttcccggcgacatcgctttacgtggg 173 Query: 62 cgacctagacgtgagcgtgcaggacgcgcagctcttcgacgtcttcgcccagatcggcgg 121 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 174 cgacctcgacgtgagcgtgcaggacgcgcagctcttcgacgtcttcgcccagatcggcgg 233 Query: 122 cgtcgtgtccgtgcgtgtctgcagggacgtcacctcgcggaagtcgctcggatacgccta 181 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 234 cgtcgtctccgtgcgcgtctgcagggacgtcacctcgcggaagtcgctcggatacgccta 293 Query: 182 cgtcaactacaacaccccagccgacgctgcacgggctcttgaaatgctcaacttcactcc 241 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 294 cgtcaactacaacaccccggctgacgctgcacgggctcttgaaatgctcaacttcactcc 353 Query: 242 tatcaacgggaggcctatcaggataatgtattctaaccgtgaccccagcttgcgcaagag 301 |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 354 tatcaatggacggcctatcaggataatgtattctaaccgtgaccccagcttgcgcaagag 413 Query: 302 tggcacagcaaatatatttattaagaatcttgacaagtcaattgacaacaaagctttgca 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 414 tggcacagcaaatatatttattaagaatcttgacaagtcaattgacaacaaagctttgta 473 Query: 362 tgacacattttgtgtgtttggaaacattctttcatgtaaagttgcaacagatcctgctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 474 tgacacattttgtgtgtttggaaacattctttcatgtaaagttgcaacagatcctgctgg 533 Query: 422 ggaatcaaagggctatggctttgttcagtatgagcgggatgaggctgctcatgctgctat 481 ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 534 ggaatcaaagggctatggcttcgttcagtacgagcgggatgaggctgctcatgctgctat 593 Query: 482 tgagaaactcaatgggatgcttatgaatgacaagaaggtttatgttgggccttttgttcg 541 |||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 594 cgagaaactgaatgggatgcttatgaatgacaagaaggtgtatgttgggcctttcgttcg 653 Query: 542 taagcaggagagagataactctccaggcagtgtcaagttcaataatgtctatgtaaagaa 601 |||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||| Sbjct: 654 taagcaggagagagataactctcccggcaatgtcaagttcaataatgtctatgttaagaa 713 Query: 602 cctagctgagactaccactgaagatgacttgaaggaaatctt 643 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 714 cctagctgagactaccactgaagatgacttgaaggaaatctt 755
>ref|XM_450039.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2314 Score = 741 bits (374), Expect = 0.0 Identities = 572/638 (89%) Strand = Plus / Plus Query: 6 gccgctgcggctgcggcggcggcgtcgtcgttcccggccacgtcgctgtacgtgggcgac 65 ||||| || |||||||||||||| | || |||||||| || ||||| ||||| || || Sbjct: 206 gccgcggccgctgcggcggcggccgcctccttcccggcgacctcgctctacgtcggggat 265 Query: 66 ctagacgtgagcgtgcaggacgcgcagctcttcgacgtcttcgcccagatcggcggcgtc 125 || ||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 266 ctcgacgtcagcgtgcaggacgcgcagctcttcgacgtcttcgcgcaggtcggcggcgtc 325 Query: 126 gtgtccgtgcgtgtctgcagggacgtcacctcgcggaagtcgctcggatacgcctacgtc 185 || |||||||| |||||||||||||||| | |||||| ||||||||| |||||||||||| Sbjct: 326 gtctccgtgcgcgtctgcagggacgtcaacacgcggaggtcgctcggctacgcctacgtc 385 Query: 186 aactacaacaccccagccgacgctgcacgggctcttgaaatgctcaacttcactcctatc 245 ||||||| || ||| ||||| |||||||| || | |||||||||||||||||||||||| Sbjct: 386 aactacagcagccccgccgatgctgcacgagcgttggaaatgctcaacttcactcctatc 445 Query: 246 aacgggaggcctatcaggataatgtattctaaccgtgaccccagcttgcgcaagagtggc 305 || || | ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 446 aatggaaaacctatcaggatcatgtattctaaccgtgaccccagcttgcgcaagagtggc 505 Query: 306 acagcaaatatatttattaagaatcttgacaagtcaattgacaacaaagctttgcatgac 365 ||||||||||| ||||| ||||| ||||| ||||| || ||||||||||||||| |||| Sbjct: 506 acagcaaatatttttatcaagaaccttgataagtcgatagacaacaaagctttgtatgat 565 Query: 366 acattttgtgtgtttggaaacattctttcatgtaaagttgcaacagatcctgctggggaa 425 || || |||||||||||||||||||||||||||||||||||||||||| || |||| ||| Sbjct: 566 actttctgtgtgtttggaaacattctttcatgtaaagttgcaacagatgcttctggagaa 625 Query: 426 tcaaagggctatggctttgttcagtatgagcgggatgaggctgctcatgctgctattgag 485 || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 626 tcgaagggctatggctttgttcagtatgagcgggatgaggcagctcaagctgctattgat 685 Query: 486 aaactcaatgggatgcttatgaatgacaagaaggtttatgttgggccttttgttcgtaag 545 ||||||||||| ||||||||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 686 aaactcaatggcatgcttatgaatgacaaaaaggtgtatgttgggcctttcattcgtaag 745 Query: 546 caggagagagataactctccaggcagtgtcaagttcaataatgtctatgtaaagaaccta 605 |||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 746 caggagagggataattctccaggccaggtcaagttcaataatgtctatgtaaagaacctg 805 Query: 606 gctgagactaccactgaagatgacttgaaggaaatctt 643 |||||| ||| |||||||||||||||||||||||||| Sbjct: 806 tctgagaatactactgaagatgacttgaaggaaatctt 843
>ref|XM_506632.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1310_F05.15 mRNA Length = 2410 Score = 741 bits (374), Expect = 0.0 Identities = 572/638 (89%) Strand = Plus / Plus Query: 6 gccgctgcggctgcggcggcggcgtcgtcgttcccggccacgtcgctgtacgtgggcgac 65 ||||| || |||||||||||||| | || |||||||| || ||||| ||||| || || Sbjct: 213 gccgcggccgctgcggcggcggccgcctccttcccggcgacctcgctctacgtcggggat 272 Query: 66 ctagacgtgagcgtgcaggacgcgcagctcttcgacgtcttcgcccagatcggcggcgtc 125 || ||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 273 ctcgacgtcagcgtgcaggacgcgcagctcttcgacgtcttcgcgcaggtcggcggcgtc 332 Query: 126 gtgtccgtgcgtgtctgcagggacgtcacctcgcggaagtcgctcggatacgcctacgtc 185 || |||||||| |||||||||||||||| | |||||| ||||||||| |||||||||||| Sbjct: 333 gtctccgtgcgcgtctgcagggacgtcaacacgcggaggtcgctcggctacgcctacgtc 392 Query: 186 aactacaacaccccagccgacgctgcacgggctcttgaaatgctcaacttcactcctatc 245 ||||||| || ||| ||||| |||||||| || | |||||||||||||||||||||||| Sbjct: 393 aactacagcagccccgccgatgctgcacgagcgttggaaatgctcaacttcactcctatc 452 Query: 246 aacgggaggcctatcaggataatgtattctaaccgtgaccccagcttgcgcaagagtggc 305 || || | ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 453 aatggaaaacctatcaggatcatgtattctaaccgtgaccccagcttgcgcaagagtggc 512 Query: 306 acagcaaatatatttattaagaatcttgacaagtcaattgacaacaaagctttgcatgac 365 ||||||||||| ||||| ||||| ||||| ||||| || ||||||||||||||| |||| Sbjct: 513 acagcaaatatttttatcaagaaccttgataagtcgatagacaacaaagctttgtatgat 572 Query: 366 acattttgtgtgtttggaaacattctttcatgtaaagttgcaacagatcctgctggggaa 425 || || |||||||||||||||||||||||||||||||||||||||||| || |||| ||| Sbjct: 573 actttctgtgtgtttggaaacattctttcatgtaaagttgcaacagatgcttctggagaa 632 Query: 426 tcaaagggctatggctttgttcagtatgagcgggatgaggctgctcatgctgctattgag 485 || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 633 tcgaagggctatggctttgttcagtatgagcgggatgaggcagctcaagctgctattgat 692 Query: 486 aaactcaatgggatgcttatgaatgacaagaaggtttatgttgggccttttgttcgtaag 545 ||||||||||| ||||||||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 693 aaactcaatggcatgcttatgaatgacaaaaaggtgtatgttgggcctttcattcgtaag 752 Query: 546 caggagagagataactctccaggcagtgtcaagttcaataatgtctatgtaaagaaccta 605 |||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 753 caggagagggataattctccaggccaggtcaagttcaataatgtctatgtaaagaacctg 812 Query: 606 gctgagactaccactgaagatgacttgaaggaaatctt 643 |||||| ||| |||||||||||||||||||||||||| Sbjct: 813 tctgagaatactactgaagatgacttgaaggaaatctt 850
>dbj|AK067816.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116F07, full insert sequence Length = 2314 Score = 741 bits (374), Expect = 0.0 Identities = 572/638 (89%) Strand = Plus / Plus Query: 6 gccgctgcggctgcggcggcggcgtcgtcgttcccggccacgtcgctgtacgtgggcgac 65 ||||| || |||||||||||||| | || |||||||| || ||||| ||||| || || Sbjct: 206 gccgcggccgctgcggcggcggccgcctccttcccggcgacctcgctctacgtcggggat 265 Query: 66 ctagacgtgagcgtgcaggacgcgcagctcttcgacgtcttcgcccagatcggcggcgtc 125 || ||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 266 ctcgacgtcagcgtgcaggacgcgcagctcttcgacgtcttcgcgcaggtcggcggcgtc 325 Query: 126 gtgtccgtgcgtgtctgcagggacgtcacctcgcggaagtcgctcggatacgcctacgtc 185 || |||||||| |||||||||||||||| | |||||| ||||||||| |||||||||||| Sbjct: 326 gtctccgtgcgcgtctgcagggacgtcaacacgcggaggtcgctcggctacgcctacgtc 385 Query: 186 aactacaacaccccagccgacgctgcacgggctcttgaaatgctcaacttcactcctatc 245 ||||||| || ||| ||||| |||||||| || | |||||||||||||||||||||||| Sbjct: 386 aactacagcagccccgccgatgctgcacgagcgttggaaatgctcaacttcactcctatc 445 Query: 246 aacgggaggcctatcaggataatgtattctaaccgtgaccccagcttgcgcaagagtggc 305 || || | ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 446 aatggaaaacctatcaggatcatgtattctaaccgtgaccccagcttgcgcaagagtggc 505 Query: 306 acagcaaatatatttattaagaatcttgacaagtcaattgacaacaaagctttgcatgac 365 ||||||||||| ||||| ||||| ||||| ||||| || ||||||||||||||| |||| Sbjct: 506 acagcaaatatttttatcaagaaccttgataagtcgatagacaacaaagctttgtatgat 565 Query: 366 acattttgtgtgtttggaaacattctttcatgtaaagttgcaacagatcctgctggggaa 425 || || |||||||||||||||||||||||||||||||||||||||||| || |||| ||| Sbjct: 566 actttctgtgtgtttggaaacattctttcatgtaaagttgcaacagatgcttctggagaa 625 Query: 426 tcaaagggctatggctttgttcagtatgagcgggatgaggctgctcatgctgctattgag 485 || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 626 tcgaagggctatggctttgttcagtatgagcgggatgaggcagctcaagctgctattgat 685 Query: 486 aaactcaatgggatgcttatgaatgacaagaaggtttatgttgggccttttgttcgtaag 545 ||||||||||| ||||||||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 686 aaactcaatggcatgcttatgaatgacaaaaaggtgtatgttgggcctttcattcgtaag 745 Query: 546 caggagagagataactctccaggcagtgtcaagttcaataatgtctatgtaaagaaccta 605 |||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 746 caggagagggataattctccaggccaggtcaagttcaataatgtctatgtaaagaacctg 805 Query: 606 gctgagactaccactgaagatgacttgaaggaaatctt 643 |||||| ||| |||||||||||||||||||||||||| Sbjct: 806 tctgagaatactactgaagatgacttgaaggaaatctt 843
>dbj|AK101706.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060I24, full insert sequence Length = 2410 Score = 733 bits (370), Expect = 0.0 Identities = 571/638 (89%) Strand = Plus / Plus Query: 6 gccgctgcggctgcggcggcggcgtcgtcgttcccggccacgtcgctgtacgtgggcgac 65 ||||| || |||||||||||||| | || |||||||| || ||||| ||||| || || Sbjct: 213 gccgcggccgctgcggcggcggccgcctccttcccggcgacctcgctctacgtcggggat 272 Query: 66 ctagacgtgagcgtgcaggacgcgcagctcttcgacgtcttcgcccagatcggcggcgtc 125 || ||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 273 ctcgacgtcagcgtgcaggacgcgcagctcttcgacgtcttcgcgcaggtcggcggcgtc 332 Query: 126 gtgtccgtgcgtgtctgcagggacgtcacctcgcggaagtcgctcggatacgcctacgtc 185 || |||||||| |||||||||||||||| | |||||| ||||||||| |||||||||||| Sbjct: 333 gtctccgtgcgcgtctgcagggacgtcaacacgcggaggtcgctcggctacgcctacgtc 392 Query: 186 aactacaacaccccagccgacgctgcacgggctcttgaaatgctcaacttcactcctatc 245 ||||||| || ||| ||||| |||||||| || | |||||||||||||||||||||||| Sbjct: 393 aactacagcagccccgccgatgctgcacgagcgttggaaatgctcaacttcactcctatc 452 Query: 246 aacgggaggcctatcaggataatgtattctaaccgtgaccccagcttgcgcaagagtggc 305 || || | ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 453 aatggaaaacctatcaggatcatgtattctaaccgtgaccccagcttgcgcaagagtggc 512 Query: 306 acagcaaatatatttattaagaatcttgacaagtcaattgacaacaaagctttgcatgac 365 ||||||||||| ||||| ||||| ||||| ||||| || |||||||||| |||| |||| Sbjct: 513 acagcaaatatttttatcaagaaccttgataagtcgatagacaacaaagttttgtatgat 572 Query: 366 acattttgtgtgtttggaaacattctttcatgtaaagttgcaacagatcctgctggggaa 425 || || |||||||||||||||||||||||||||||||||||||||||| || |||| ||| Sbjct: 573 actttctgtgtgtttggaaacattctttcatgtaaagttgcaacagatgcttctggagaa 632 Query: 426 tcaaagggctatggctttgttcagtatgagcgggatgaggctgctcatgctgctattgag 485 || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 633 tcgaagggctatggctttgttcagtatgagcgggatgaggcagctcaagctgctattgat 692 Query: 486 aaactcaatgggatgcttatgaatgacaagaaggtttatgttgggccttttgttcgtaag 545 ||||||||||| ||||||||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 693 aaactcaatggcatgcttatgaatgacaaaaaggtgtatgttgggcctttcattcgtaag 752 Query: 546 caggagagagataactctccaggcagtgtcaagttcaataatgtctatgtaaagaaccta 605 |||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 753 caggagagggataattctccaggccaggtcaagttcaataatgtctatgtaaagaacctg 812 Query: 606 gctgagactaccactgaagatgacttgaaggaaatctt 643 |||||| ||| |||||||||||||||||||||||||| Sbjct: 813 tctgagaatactactgaagatgacttgaaggaaatctt 850
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 402 bits (203), Expect = e-109 Identities = 290/319 (90%) Strand = Plus / Minus Query: 325 agaatcttgacaagtcaattgacaacaaagctttgcatgacacattttgtgtgtttggaa 384 |||| ||||| ||||| || ||||||||||||||| |||| || || ||||||||||||| Sbjct: 1163168 agaaccttgataagtcgatagacaacaaagctttgtatgatactttctgtgtgtttggaa 1163109 Query: 385 acattctttcatgtaaagttgcaacagatcctgctggggaatcaaagggctatggctttg 444 ||||||||||||||||||||||||||||| || |||| ||||| |||||||||||||||| Sbjct: 1163108 acattctttcatgtaaagttgcaacagatgcttctggagaatcgaagggctatggctttg 1163049 Query: 445 ttcagtatgagcgggatgaggctgctcatgctgctattgagaaactcaatgggatgctta 504 |||||||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||||| Sbjct: 1163048 ttcagtatgagcgggatgaggcagctcaagctgctattgataaactcaatggcatgctta 1162989 Query: 505 tgaatgacaagaaggtttatgttgggccttttgttcgtaagcaggagagagataactctc 564 |||||||||| ||||| |||||||||||||| |||||||||||||||| ||||| |||| Sbjct: 1162988 tgaatgacaaaaaggtgtatgttgggcctttcattcgtaagcaggagagggataattctc 1162929 Query: 565 caggcagtgtcaagttcaataatgtctatgtaaagaacctagctgagactaccactgaag 624 ||||| |||||||||||||||||||||||||||||||| |||||| ||| ||||||| Sbjct: 1162928 caggccaggtcaagttcaataatgtctatgtaaagaacctgtctgagaatactactgaag 1162869 Query: 625 atgacttgaaggaaatctt 643 ||||||||||||||||||| Sbjct: 1162868 atgacttgaaggaaatctt 1162850 Score = 198 bits (100), Expect = 2e-47 Identities = 175/200 (87%) Strand = Plus / Minus Query: 6 gccgctgcggctgcggcggcggcgtcgtcgttcccggccacgtcgctgtacgtgggcgac 65 ||||| || |||||||||||||| | || |||||||| || ||||| ||||| || || Sbjct: 1164506 gccgcggccgctgcggcggcggccgcctccttcccggcgacctcgctctacgtcggggat 1164447 Query: 66 ctagacgtgagcgtgcaggacgcgcagctcttcgacgtcttcgcccagatcggcggcgtc 125 || ||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 1164446 ctcgacgtcagcgtgcaggacgcgcagctcttcgacgtcttcgcgcaggtcggcggcgtc 1164387 Query: 126 gtgtccgtgcgtgtctgcagggacgtcacctcgcggaagtcgctcggatacgcctacgtc 185 || |||||||| |||||||||||||||| | |||||| ||||||||| |||||||||||| Sbjct: 1164386 gtctccgtgcgcgtctgcagggacgtcaacacgcggaggtcgctcggctacgcctacgtc 1164327 Query: 186 aactacaacaccccagccga 205 ||||||| || ||| ||||| Sbjct: 1164326 aactacagcagccccgccga 1164307 Score = 153 bits (77), Expect = 8e-34 Identities = 95/101 (94%) Strand = Plus / Minus Query: 222 gaaatgctcaacttcactcctatcaacgggaggcctatcaggataatgtattctaaccgt 281 |||||||||||||||||||||||||| || | ||||||||||| ||||||||||||||| Sbjct: 1163349 gaaatgctcaacttcactcctatcaatggaaaacctatcaggatcatgtattctaaccgt 1163290 Query: 282 gaccccagcttgcgcaagagtggcacagcaaatatatttat 322 ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1163289 gaccccagcttgcgcaagagtggcacagcaaatatttttat 1163249 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 6 gccgctgcggctgcggcggcggcgtcgtcg 35 ||||| |||||||||||||||||| ||||| Sbjct: 17502841 gccgccgcggctgcggcggcggcggcgtcg 17502812 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 19819358 gctgcggctgcggcggcggcg 19819378 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 8559309 gctgcggctgcggcggcggcg 8559289 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 cggccgctgcggctgcggcggcgg 27 ||||||||||||| |||||||||| Sbjct: 21013199 cggccgctgcggcggcggcggcgg 21013176 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 cggctgcggcggcggcgtcgtcgt 36 ||||||||||||||||| |||||| Sbjct: 19872138 cggctgcggcggcggcgacgtcgt 19872115 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggc 28 |||||||||||||||||||| Sbjct: 18475080 gctgcggctgcggcggcggc 18475099 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggc 28 |||||||||||||||||||| Sbjct: 18463621 gctgcggctgcggcggcggc 18463640 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 cggctgcggcggcggcgtcg 32 |||||||||||||||||||| Sbjct: 15040137 cggctgcggcggcggcgtcg 15040156
>dbj|AP005569.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1310_F05 Length = 107916 Score = 402 bits (203), Expect = e-109 Identities = 290/319 (90%) Strand = Plus / Minus Query: 325 agaatcttgacaagtcaattgacaacaaagctttgcatgacacattttgtgtgtttggaa 384 |||| ||||| ||||| || ||||||||||||||| |||| || || ||||||||||||| Sbjct: 51762 agaaccttgataagtcgatagacaacaaagctttgtatgatactttctgtgtgtttggaa 51703 Query: 385 acattctttcatgtaaagttgcaacagatcctgctggggaatcaaagggctatggctttg 444 ||||||||||||||||||||||||||||| || |||| ||||| |||||||||||||||| Sbjct: 51702 acattctttcatgtaaagttgcaacagatgcttctggagaatcgaagggctatggctttg 51643 Query: 445 ttcagtatgagcgggatgaggctgctcatgctgctattgagaaactcaatgggatgctta 504 |||||||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||||| Sbjct: 51642 ttcagtatgagcgggatgaggcagctcaagctgctattgataaactcaatggcatgctta 51583 Query: 505 tgaatgacaagaaggtttatgttgggccttttgttcgtaagcaggagagagataactctc 564 |||||||||| ||||| |||||||||||||| |||||||||||||||| ||||| |||| Sbjct: 51582 tgaatgacaaaaaggtgtatgttgggcctttcattcgtaagcaggagagggataattctc 51523 Query: 565 caggcagtgtcaagttcaataatgtctatgtaaagaacctagctgagactaccactgaag 624 ||||| |||||||||||||||||||||||||||||||| |||||| ||| ||||||| Sbjct: 51522 caggccaggtcaagttcaataatgtctatgtaaagaacctgtctgagaatactactgaag 51463 Query: 625 atgacttgaaggaaatctt 643 ||||||||||||||||||| Sbjct: 51462 atgacttgaaggaaatctt 51444 Score = 198 bits (100), Expect = 2e-47 Identities = 175/200 (87%) Strand = Plus / Minus Query: 6 gccgctgcggctgcggcggcggcgtcgtcgttcccggccacgtcgctgtacgtgggcgac 65 ||||| || |||||||||||||| | || |||||||| || ||||| ||||| || || Sbjct: 53100 gccgcggccgctgcggcggcggccgcctccttcccggcgacctcgctctacgtcggggat 53041 Query: 66 ctagacgtgagcgtgcaggacgcgcagctcttcgacgtcttcgcccagatcggcggcgtc 125 || ||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 53040 ctcgacgtcagcgtgcaggacgcgcagctcttcgacgtcttcgcgcaggtcggcggcgtc 52981 Query: 126 gtgtccgtgcgtgtctgcagggacgtcacctcgcggaagtcgctcggatacgcctacgtc 185 || |||||||| |||||||||||||||| | |||||| ||||||||| |||||||||||| Sbjct: 52980 gtctccgtgcgcgtctgcagggacgtcaacacgcggaggtcgctcggctacgcctacgtc 52921 Query: 186 aactacaacaccccagccga 205 ||||||| || ||| ||||| Sbjct: 52920 aactacagcagccccgccga 52901 Score = 153 bits (77), Expect = 8e-34 Identities = 95/101 (94%) Strand = Plus / Minus Query: 222 gaaatgctcaacttcactcctatcaacgggaggcctatcaggataatgtattctaaccgt 281 |||||||||||||||||||||||||| || | ||||||||||| ||||||||||||||| Sbjct: 51943 gaaatgctcaacttcactcctatcaatggaaaacctatcaggatcatgtattctaaccgt 51884 Query: 282 gaccccagcttgcgcaagagtggcacagcaaatatatttat 322 ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 51883 gaccccagcttgcgcaagagtggcacagcaaatatttttat 51843
>gb|BT009274.1| Triticum aestivum clone wlk8.pk0015.b12:fis, full insert mRNA sequence Length = 2056 Score = 347 bits (175), Expect = 3e-92 Identities = 487/591 (82%) Strand = Plus / Plus Query: 36 ttcccggccacgtcgctgtacgtgggcgacctagacgtgagcgtgcaggacgcgcagctc 95 |||||||| ||||| ||||||||||| || || |||||||| |||||||||||||||||| Sbjct: 17 ttcccggcgacgtccctgtacgtgggggatctggacgtgagtgtgcaggacgcgcagctc 76 Query: 96 ttcgacgtcttcgcccagatcggcggcgtcgtgtccgtgcgtgtctgcagggacgtcacc 155 || ||||||||| |||| ||||| || ||||| ||||| || ||| ||||||||| | Sbjct: 77 tttgacgtcttcagccaggtcggctcggtggtgtctgtgcgcgtgtgccgggacgtcaac 136 Query: 156 tcgcggaagtcgctcggatacgcctacgtcaactacaacaccccagccgacgctgcacgg 215 | ||| ||| || || ||||| |||||||||| || || ||| ||||| |||||| || Sbjct: 137 accaggatgtccctaggttacgcgtacgtcaacttcagcagccctgccgatgctgcaagg 196 Query: 216 gctcttgaaatgctcaacttcactcctatcaacgggaggcctatcaggataatgtattct 275 || | |||||||| ||||| |||||| | || |||| |||||| ||||||||||||||| Sbjct: 197 gcattggaaatgctgaactttactcctgttaatgggaagcctataaggataatgtattct 256 Query: 276 aaccgtgaccccagcttgcgcaagagtggcacagcaaatatatttattaagaatcttgac 335 ||||||||||| |||| || || ||||| | |||||||||||||| |||||||||||| Sbjct: 257 aaccgtgacccaagctcacgtaaaagtggtgctgcaaatatatttatcaagaatcttgac 316 Query: 336 aagtcaattgacaacaaagctttgcatgacacattttgtgtgtttggaaacattctttca 395 |||||||| || |||||||| | |||||||||||| || |||||||||||||||||| Sbjct: 317 aagtcaatagataacaaagcgctctatgacacattttctgcctttggaaacattctttca 376 Query: 396 tgtaaagttgcaacagatcctgctggggaatcaaagggctatggctttgttcagtatgag 455 || |||||||| ||||| |||| ||||| ||||| ||||| ||||||||||||||| Sbjct: 377 tgcaaagttgctacagaaatgtctggagaatccaagggttatggttttgttcagtatgag 436 Query: 456 cgggatgaggctgctcatgctgctattgagaaactcaatgggatgcttatgaatgacaag 515 | ||| || | || || |||||| | ||||||||||||||||| |||||||||| Sbjct: 437 caggacgaatcagcacagaatgctatcaatgaactcaatgggatgcttttgaatgacaaa 496 Query: 516 aaggtttatgttgggccttttgttcgtaagcaggagagagataactctccaggcagtgtc 575 ||||||||||||||||||||||||||||| ||||| || || || | |||||| | Sbjct: 497 aaggtttatgttgggccttttgttcgtaaacaggaaagggaaaatgtttttggcagtccc 556 Query: 576 aagttcaataatgtctatgtaaagaacctagctgagactaccactgaagat 626 |||||||||||||||||||||||||| ||| | || |||||||||||||| Sbjct: 557 aagttcaataatgtctatgtaaagaatctatcagaatctaccactgaagat 607
>ref|XM_481529.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1983 Score = 321 bits (162), Expect = 2e-84 Identities = 429/518 (82%) Strand = Plus / Plus Query: 36 ttcccggccacgtcgctgtacgtgggcgacctagacgtgagcgtgcaggacgcgcagctc 95 |||| ||| ||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 106 ttccaggcgacgtcgctgtacgtgggggacctcgacgtgagcgtgcaggacgcgcagctg 165 Query: 96 ttcgacgtcttcgcccagatcggcggcgtcgtgtccgtgcgtgtctgcagggacgtcacc 155 |||||||||||| |||| |||| || || || ||||| || ||| ||||||||| Sbjct: 166 ttcgacgtcttcagccaggtcggatcggtggtatcggtgcgcgtttgccgggacgtcaat 225 Query: 156 tcgcggaagtcgctcggatacgcctacgtcaactacaacaccccagccgacgctgcacgg 215 | || |||||| || |||||||| ||||||| || || || ||||| |||||| || Sbjct: 226 accaggctgtcgctgggttacgcctatgtcaacttcagcagtcccgccgatgctgcaagg 285 Query: 216 gctcttgaaatgctcaacttcactcctatcaacgggaggcctatcaggataatgtattct 275 || | |||||||| |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 286 gcattggaaatgctgaacttcactcctattaacgggaagcctatcaggataatgtattct 345 Query: 276 aaccgtgaccccagcttgcgcaagagtggcacagcaaatatatttattaagaatcttgac 335 |||||||||||||||| || || ||||| ||||||| ||||||||||||||||||||| Sbjct: 346 aaccgtgaccccagctcacgtaaaagtggagcagcaaacatatttattaagaatcttgac 405 Query: 336 aagtcaattgacaacaaagctttgcatgacacattttgtgtgtttggaaacattctttca 395 |||||||| || ||||||||| | |||||||||||| ||| ||||| || |||||||| Sbjct: 406 aagtcaatagataacaaagctctctatgacacattttctgtatttgggaatattctttcg 465 Query: 396 tgtaaagttgcaacagatcctgctggggaatcaaagggctatggctttgttcagtatgag 455 |||||||| || || || |||| || || ||||| ||||| |||||||||| |||| Sbjct: 466 tgtaaagtcgcgacggaaatgtctggagagtcgaagggatatggttttgttcagtttgag 525 Query: 456 cgggatgaggctgctcatgctgctattgagaaactcaatgggatgcttatgaatgacaag 515 | ||| || ||||| || |||||| || ||||||||||||||| |||||||||| Sbjct: 526 ctggaagaagctgcccagaatgctatcagtaagctcaatgggatgcttttgaatgacaaa 585 Query: 516 aaggtttatgttgggccttttgttcgtaagcaggagag 553 ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 586 aaggtgtatgtagggccttttgttcgtaaacaggagag 623
>dbj|AK098867.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A12, full insert sequence Length = 2412 Score = 321 bits (162), Expect = 2e-84 Identities = 429/518 (82%) Strand = Plus / Plus Query: 36 ttcccggccacgtcgctgtacgtgggcgacctagacgtgagcgtgcaggacgcgcagctc 95 |||| ||| ||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 273 ttccaggcgacgtcgctgtacgtgggggacctcgacgtgagcgtgcaggacgcgcagctg 332 Query: 96 ttcgacgtcttcgcccagatcggcggcgtcgtgtccgtgcgtgtctgcagggacgtcacc 155 |||||||||||| |||| |||| || || || ||||| || ||| ||||||||| Sbjct: 333 ttcgacgtcttcagccaggtcggatcggtggtatcggtgcgcgtttgccgggacgtcaat 392 Query: 156 tcgcggaagtcgctcggatacgcctacgtcaactacaacaccccagccgacgctgcacgg 215 | || |||||| || |||||||| ||||||| || || || ||||| |||||| || Sbjct: 393 accaggctgtcgctgggttacgcctatgtcaacttcagcagtcccgccgatgctgcaagg 452 Query: 216 gctcttgaaatgctcaacttcactcctatcaacgggaggcctatcaggataatgtattct 275 || | |||||||| |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 453 gcattggaaatgctgaacttcactcctattaacgggaagcctatcaggataatgtattct 512 Query: 276 aaccgtgaccccagcttgcgcaagagtggcacagcaaatatatttattaagaatcttgac 335 |||||||||||||||| || || ||||| ||||||| ||||||||||||||||||||| Sbjct: 513 aaccgtgaccccagctcacgtaaaagtggagcagcaaacatatttattaagaatcttgac 572 Query: 336 aagtcaattgacaacaaagctttgcatgacacattttgtgtgtttggaaacattctttca 395 |||||||| || ||||||||| | |||||||||||| ||| ||||| || |||||||| Sbjct: 573 aagtcaatagataacaaagctctctatgacacattttctgtatttgggaatattctttcg 632 Query: 396 tgtaaagttgcaacagatcctgctggggaatcaaagggctatggctttgttcagtatgag 455 |||||||| || || || |||| || || ||||| ||||| |||||||||| |||| Sbjct: 633 tgtaaagtcgcgacggaaatgtctggagagtcgaagggatatggttttgttcagtttgag 692 Query: 456 cgggatgaggctgctcatgctgctattgagaaactcaatgggatgcttatgaatgacaag 515 | ||| || ||||| || |||||| || ||||||||||||||| |||||||||| Sbjct: 693 ctggaagaagctgcccagaatgctatcagtaagctcaatgggatgcttttgaatgacaaa 752 Query: 516 aaggtttatgttgggccttttgttcgtaagcaggagag 553 ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 753 aaggtgtatgtagggccttttgttcgtaaacaggagag 790
>dbj|AK065167.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002C13, full insert sequence Length = 2387 Score = 321 bits (162), Expect = 2e-84 Identities = 429/518 (82%) Strand = Plus / Plus Query: 36 ttcccggccacgtcgctgtacgtgggcgacctagacgtgagcgtgcaggacgcgcagctc 95 |||| ||| ||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 303 ttccaggcgacgtcgctgtacgtgggggacctcgacgtgagcgtgcaggacgcgcagctg 362 Query: 96 ttcgacgtcttcgcccagatcggcggcgtcgtgtccgtgcgtgtctgcagggacgtcacc 155 |||||||||||| |||| |||| || || || ||||| || ||| ||||||||| Sbjct: 363 ttcgacgtcttcagccaggtcggatcggtggtatcggtgcgcgtttgccgggacgtcaat 422 Query: 156 tcgcggaagtcgctcggatacgcctacgtcaactacaacaccccagccgacgctgcacgg 215 | || |||||| || |||||||| ||||||| || || || ||||| |||||| || Sbjct: 423 accaggctgtcgctgggttacgcctatgtcaacttcagcagtcccgccgatgctgcaagg 482 Query: 216 gctcttgaaatgctcaacttcactcctatcaacgggaggcctatcaggataatgtattct 275 || | |||||||| |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 483 gcattggaaatgctgaacttcactcctattaacgggaagcctatcaggataatgtattct 542 Query: 276 aaccgtgaccccagcttgcgcaagagtggcacagcaaatatatttattaagaatcttgac 335 |||||||||||||||| || || ||||| ||||||| ||||||||||||||||||||| Sbjct: 543 aaccgtgaccccagctcacgtaaaagtggagcagcaaacatatttattaagaatcttgac 602 Query: 336 aagtcaattgacaacaaagctttgcatgacacattttgtgtgtttggaaacattctttca 395 |||||||| || ||||||||| | |||||||||||| ||| ||||| || |||||||| Sbjct: 603 aagtcaatagataacaaagctctctatgacacattttctgtatttgggaatattctttcg 662 Query: 396 tgtaaagttgcaacagatcctgctggggaatcaaagggctatggctttgttcagtatgag 455 |||||||| || || || |||| || || ||||| ||||| |||||||||| |||| Sbjct: 663 tgtaaagtcgcgacggaaatgtctggagagtcgaagggatatggttttgttcagtttgag 722 Query: 456 cgggatgaggctgctcatgctgctattgagaaactcaatgggatgcttatgaatgacaag 515 | ||| || ||||| || |||||| || ||||||||||||||| |||||||||| Sbjct: 723 ctggaagaagctgcccagaatgctatcagtaagctcaatgggatgcttttgaatgacaaa 782 Query: 516 aaggtttatgttgggccttttgttcgtaagcaggagag 553 ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 783 aaggtgtatgtagggccttttgttcgtaaacaggagag 820
>gb|AY103895.1| Zea mays PCO112590 mRNA sequence Length = 1997 Score = 317 bits (160), Expect = 3e-83 Identities = 280/320 (87%) Strand = Plus / Plus Query: 231 aacttcactcctatcaacgggaggcctatcaggataatgtattctaaccgtgaccccagc 290 ||||||||||||||||| || | |||||||||||| |||||||||||||||||||| ||| Sbjct: 2 aacttcactcctatcaatggaaagcctatcaggatcatgtattctaaccgtgaccctagc 61 Query: 291 ttgcgcaagagtggcacagcaaatatatttattaagaatcttgacaagtcaattgacaac 350 | |||||| || ||||||| |||||||||||||||||||||||| |||||||| |||||| Sbjct: 62 tcgcgcaaaagcggcacaggaaatatatttattaagaatcttgataagtcaatagacaac 121 Query: 351 aaagctttgcatgacacattttgtgtgtttggaaacattctttcatgtaaagttgcaaca 410 |||||||| |||||||||| |||| ||||| || || |||||||||||| |||||||| Sbjct: 122 aaagctttatatgacacattctgtgcatttgggaatatactttcatgtaaaattgcaaca 181 Query: 411 gatcctgctggggaatcaaagggctatggctttgttcagtatgagcgggatgaggctgct 470 || ||| | || ||||||| ||||||||| |||||||||| |||| |||||| |||| Sbjct: 182 gacccttcaggagaatcaaggggctatggttttgttcagtttgagaaggatgaatctgca 241 Query: 471 catgctgctattgagaaactcaatgggatgcttatgaatgacaagaaggtttatgttggg 530 || |||||||||| |||||||||||||||||||| ||||||||||| || | |||||| Sbjct: 242 cagtctgctattgataaactcaatgggatgcttatcaatgacaagaaagtgtttgttgga 301 Query: 531 ccttttgttcgtaagcagga 550 |||||||||||||||||||| Sbjct: 302 ccttttgttcgtaagcagga 321
>gb|AY103559.1| Zea mays PCO112591 mRNA sequence Length = 1361 Score = 262 bits (132), Expect = 1e-66 Identities = 264/308 (85%) Strand = Plus / Minus Query: 15 gctgcggcggcggcgtcgtcgttcccggccacgtcgctgtacgtgggcgacctagacgtg 74 ||||| ||||||||| | |||||||||| || || || |||||||| |||| ||| | Sbjct: 308 gctgcagcggcggcggctgcgttcccggcgacttctctctacgtgggtgaccggcacgag 249 Query: 75 agcgtgcaggacgcgcagctcttcgacgtcttcgcccagatcggcggcgtcgtgtccgtg 134 ||||| |||||||| |||||||||||||||||| |||| ||||||||||||| |||||| Sbjct: 248 agcgttcaggacgcacagctcttcgacgtcttcagccaggtcggcggcgtcgtctccgtg 189 Query: 135 cgtgtctgcagggacgtcacctcgcggaagtcgctcggatacgcctacgtcaactacaac 194 || |||||||| ||| ||| ||| || ||||||||||| ||||||||||||||||||||| Sbjct: 188 cgcgtctgcagagacatcaactcccgcaagtcgctcggctacgcctacgtcaactacaac 129 Query: 195 accccagccgacgctgcacgggctcttgaaatgctcaacttcactcctatcaacgggagg 254 | | | ||||||||||||||| |||||| |||| ||||||||||||||||| || | | Sbjct: 128 aacactagcgacgctgcacgggcacttgaactgcttaacttcactcctatcaatggaaag 69 Query: 255 cctatcaggataatgtattctaaccgtgaccccagcttgcgcaagagtggcacagcaaat 314 ||||||||||| ||||||||||||||||||||||||| |||||| || || ||| |||| Sbjct: 68 cctatcaggatcatgtattctaaccgtgaccccagctcgcgcaaaagcggtgcaggaaat 9 Query: 315 atatttat 322 |||||||| Sbjct: 8 atatttat 1
>gb|AY360385.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0095C12, complete sequence Length = 146632 Score = 129 bits (65), Expect = 1e-26 Identities = 188/229 (82%) Strand = Plus / Plus Query: 325 agaatcttgacaagtcaattgacaacaaagctttgcatgacacattttgtgtgtttggaa 384 ||||||||||||||||||| || ||||||||| | |||||||||||| ||| ||||| | Sbjct: 53545 agaatcttgacaagtcaatagataacaaagctctctatgacacattttctgtatttggga 53604 Query: 385 acattctttcatgtaaagttgcaacagatcctgctggggaatcaaagggctatggctttg 444 | |||||||| |||||||| || || || |||| || || ||||| ||||| |||| Sbjct: 53605 atattctttcgtgtaaagtcgcgacggaaatgtctggagagtcgaagggatatggttttg 53664 Query: 445 ttcagtatgagcgggatgaggctgctcatgctgctattgagaaactcaatgggatgctta 504 |||||| ||||| ||| || ||||| || |||||| || ||||||||||||||| Sbjct: 53665 ttcagtttgagctggaagaagctgcccagaatgctatcagtaagctcaatgggatgcttt 53724 Query: 505 tgaatgacaagaaggtttatgttgggccttttgttcgtaagcaggagag 553 |||||||||| ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 53725 tgaatgacaaaaaggtgtatgtagggccttttgttcgtaaacaggagag 53773 Score = 129 bits (65), Expect = 1e-26 Identities = 95/105 (90%) Strand = Plus / Plus Query: 222 gaaatgctcaacttcactcctatcaacgggaggcctatcaggataatgtattctaaccgt 281 |||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 53360 gaaatgctgaacttcactcctattaacgggaagcctatcaggataatgtattctaaccgt 53419 Query: 282 gaccccagcttgcgcaagagtggcacagcaaatatatttattaag 326 |||||||||| || || ||||| ||||||| |||||||||||| Sbjct: 53420 gaccccagctcacgtaaaagtggagcagcaaacatatttattaag 53464 Score = 103 bits (52), Expect = 7e-19 Identities = 67/72 (93%) Strand = Plus / Plus Query: 36 ttcccggccacgtcgctgtacgtgggcgacctagacgtgagcgtgcaggacgcgcagctc 95 |||| ||| ||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 52430 ttccaggcgacgtcgctgtacgtgggggacctcgacgtgagcgtgcaggacgcgcagctg 52489 Query: 96 ttcgacgtcttc 107 |||||||||||| Sbjct: 52490 ttcgacgtcttc 52501
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 129 bits (65), Expect = 1e-26 Identities = 188/229 (82%) Strand = Plus / Plus Query: 325 agaatcttgacaagtcaattgacaacaaagctttgcatgacacattttgtgtgtttggaa 384 ||||||||||||||||||| || ||||||||| | |||||||||||| ||| ||||| | Sbjct: 13465918 agaatcttgacaagtcaatagataacaaagctctctatgacacattttctgtatttggga 13465977 Query: 385 acattctttcatgtaaagttgcaacagatcctgctggggaatcaaagggctatggctttg 444 | |||||||| |||||||| || || || |||| || || ||||| ||||| |||| Sbjct: 13465978 atattctttcgtgtaaagtcgcgacggaaatgtctggagagtcgaagggatatggttttg 13466037 Query: 445 ttcagtatgagcgggatgaggctgctcatgctgctattgagaaactcaatgggatgctta 504 |||||| ||||| ||| || ||||| || |||||| || ||||||||||||||| Sbjct: 13466038 ttcagtttgagctggaagaagctgcccagaatgctatcagtaagctcaatgggatgcttt 13466097 Query: 505 tgaatgacaagaaggtttatgttgggccttttgttcgtaagcaggagag 553 |||||||||| ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 13466098 tgaatgacaaaaaggtgtatgtagggccttttgttcgtaaacaggagag 13466146 Score = 129 bits (65), Expect = 1e-26 Identities = 95/105 (90%) Strand = Plus / Plus Query: 222 gaaatgctcaacttcactcctatcaacgggaggcctatcaggataatgtattctaaccgt 281 |||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 13465733 gaaatgctgaacttcactcctattaacgggaagcctatcaggataatgtattctaaccgt 13465792 Query: 282 gaccccagcttgcgcaagagtggcacagcaaatatatttattaag 326 |||||||||| || || ||||| ||||||| |||||||||||| Sbjct: 13465793 gaccccagctcacgtaaaagtggagcagcaaacatatttattaag 13465837 Score = 103 bits (52), Expect = 7e-19 Identities = 67/72 (93%) Strand = Plus / Plus Query: 36 ttcccggccacgtcgctgtacgtgggcgacctagacgtgagcgtgcaggacgcgcagctc 95 |||| ||| ||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 13464803 ttccaggcgacgtcgctgtacgtgggggacctcgacgtgagcgtgcaggacgcgcagctg 13464862 Query: 96 ttcgacgtcttc 107 |||||||||||| Sbjct: 13464863 ttcgacgtcttc 13464874 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcggcgtcg 32 |||||| || ||||||||||||||||||||| Sbjct: 9117360 ggcggcggcggcggctgcggcggcggcgtcg 9117330 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 cgctgcggctgcggcggcggc 28 ||||||||||||||||||||| Sbjct: 11751773 cgctgcggctgcggcggcggc 11751793 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 ggccgctgcggctgcggcggcggcg 29 |||||||||||| |||||||||||| Sbjct: 5412224 ggccgctgcggcggcggcggcggcg 5412200 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 4694438 gctgcggctgcggcggcggcg 4694418 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctgcggctgcggcggcggcg 29 |||||||||||||||||||| Sbjct: 24475366 ctgcggctgcggcggcggcg 24475385 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 gctgcggctgcggcggcggcgtcg 32 |||||||| ||||||||||||||| Sbjct: 6266171 gctgcggcggcggcggcggcgtcg 6266148 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggc 28 |||||||||||||||||||| Sbjct: 3735942 gctgcggctgcggcggcggc 3735961
>dbj|AP005500.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0451H06 Length = 136473 Score = 129 bits (65), Expect = 1e-26 Identities = 188/229 (82%) Strand = Plus / Plus Query: 325 agaatcttgacaagtcaattgacaacaaagctttgcatgacacattttgtgtgtttggaa 384 ||||||||||||||||||| || ||||||||| | |||||||||||| ||| ||||| | Sbjct: 4232 agaatcttgacaagtcaatagataacaaagctctctatgacacattttctgtatttggga 4291 Query: 385 acattctttcatgtaaagttgcaacagatcctgctggggaatcaaagggctatggctttg 444 | |||||||| |||||||| || || || |||| || || ||||| ||||| |||| Sbjct: 4292 atattctttcgtgtaaagtcgcgacggaaatgtctggagagtcgaagggatatggttttg 4351 Query: 445 ttcagtatgagcgggatgaggctgctcatgctgctattgagaaactcaatgggatgctta 504 |||||| ||||| ||| || ||||| || |||||| || ||||||||||||||| Sbjct: 4352 ttcagtttgagctggaagaagctgcccagaatgctatcagtaagctcaatgggatgcttt 4411 Query: 505 tgaatgacaagaaggtttatgttgggccttttgttcgtaagcaggagag 553 |||||||||| ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 4412 tgaatgacaaaaaggtgtatgtagggccttttgttcgtaaacaggagag 4460 Score = 129 bits (65), Expect = 1e-26 Identities = 95/105 (90%) Strand = Plus / Plus Query: 222 gaaatgctcaacttcactcctatcaacgggaggcctatcaggataatgtattctaaccgt 281 |||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 4047 gaaatgctgaacttcactcctattaacgggaagcctatcaggataatgtattctaaccgt 4106 Query: 282 gaccccagcttgcgcaagagtggcacagcaaatatatttattaag 326 |||||||||| || || ||||| ||||||| |||||||||||| Sbjct: 4107 gaccccagctcacgtaaaagtggagcagcaaacatatttattaag 4151 Score = 103 bits (52), Expect = 7e-19 Identities = 67/72 (93%) Strand = Plus / Plus Query: 36 ttcccggccacgtcgctgtacgtgggcgacctagacgtgagcgtgcaggacgcgcagctc 95 |||| ||| ||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 3117 ttccaggcgacgtcgctgtacgtgggggacctcgacgtgagcgtgcaggacgcgcagctg 3176 Query: 96 ttcgacgtcttc 107 |||||||||||| Sbjct: 3177 ttcgacgtcttc 3188
>dbj|AP004228.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1120_B07 Length = 118763 Score = 129 bits (65), Expect = 1e-26 Identities = 188/229 (82%) Strand = Plus / Plus Query: 325 agaatcttgacaagtcaattgacaacaaagctttgcatgacacattttgtgtgtttggaa 384 ||||||||||||||||||| || ||||||||| | |||||||||||| ||| ||||| | Sbjct: 102645 agaatcttgacaagtcaatagataacaaagctctctatgacacattttctgtatttggga 102704 Query: 385 acattctttcatgtaaagttgcaacagatcctgctggggaatcaaagggctatggctttg 444 | |||||||| |||||||| || || || |||| || || ||||| ||||| |||| Sbjct: 102705 atattctttcgtgtaaagtcgcgacggaaatgtctggagagtcgaagggatatggttttg 102764 Query: 445 ttcagtatgagcgggatgaggctgctcatgctgctattgagaaactcaatgggatgctta 504 |||||| ||||| ||| || ||||| || |||||| || ||||||||||||||| Sbjct: 102765 ttcagtttgagctggaagaagctgcccagaatgctatcagtaagctcaatgggatgcttt 102824 Query: 505 tgaatgacaagaaggtttatgttgggccttttgttcgtaagcaggagag 553 |||||||||| ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 102825 tgaatgacaaaaaggtgtatgtagggccttttgttcgtaaacaggagag 102873 Score = 129 bits (65), Expect = 1e-26 Identities = 95/105 (90%) Strand = Plus / Plus Query: 222 gaaatgctcaacttcactcctatcaacgggaggcctatcaggataatgtattctaaccgt 281 |||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 102460 gaaatgctgaacttcactcctattaacgggaagcctatcaggataatgtattctaaccgt 102519 Query: 282 gaccccagcttgcgcaagagtggcacagcaaatatatttattaag 326 |||||||||| || || ||||| ||||||| |||||||||||| Sbjct: 102520 gaccccagctcacgtaaaagtggagcagcaaacatatttattaag 102564 Score = 103 bits (52), Expect = 7e-19 Identities = 67/72 (93%) Strand = Plus / Plus Query: 36 ttcccggccacgtcgctgtacgtgggcgacctagacgtgagcgtgcaggacgcgcagctc 95 |||| ||| ||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 101530 ttccaggcgacgtcgctgtacgtgggggacctcgacgtgagcgtgcaggacgcgcagctg 101589 Query: 96 ttcgacgtcttc 107 |||||||||||| Sbjct: 101590 ttcgacgtcttc 101601
>gb|AY103944.1| Zea mays PCO133356 mRNA sequence Length = 2499 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 126 gtgtccgtgcgtgtctgcagggacgtcacctcgcggaagtcgctcggatacgcctacgtc 185 ||||| ||||| ||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 398 gtgtcggtgcgcgtctgcagggatgtcacctcgcgccgctcgctcggatacgcctacgtc 457 Query: 186 aactaca 192 ||||||| Sbjct: 458 aactaca 464 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 495 gggatgcttatgaatgacaagaaggtttatgttgggccttttgttcgtaagcaggagaga 554 ||||||||||| ||||| ||| |||| |||||| ||||||||||| ||||| || ||| Sbjct: 767 gggatgcttataaatgataagcctgtttttgttggaccttttgttcgcaagcaagaaaga 826 Query: 555 gat 557 ||| Sbjct: 827 gat 829 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 37 tcccggccacgtcgctgtacgtgggcgacct 67 ||||| |||||||||| |||||||||||||| Sbjct: 309 tcccgaccacgtcgctctacgtgggcgacct 339
>ref|NM_001031597.1| Gallus gallus poly(A) binding protein, cytoplasmic 1 (PABPC1), mRNA Length = 2853 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 333 gacaagtcaattgacaacaaagctttgcatgacacattttgtgtgtttggaaacattctt 392 ||||| |||||||| |||||||||||| |||||||||||| || ||||||||||| ||| Sbjct: 795 gacaaatcaattgataacaaagctttgtatgacacattttctgcttttggaaacatcctt 854 Query: 393 tcatgtaa 400 || ||||| Sbjct: 855 tcttgtaa 862
>emb|AJ719881.1| Gallus gallus mRNA for hypothetical protein, clone 7l20 Length = 2853 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 333 gacaagtcaattgacaacaaagctttgcatgacacattttgtgtgtttggaaacattctt 392 ||||| |||||||| |||||||||||| |||||||||||| || ||||||||||| ||| Sbjct: 795 gacaaatcaattgataacaaagctttgtatgacacattttctgcttttggaaacatcctt 854 Query: 393 tcatgtaa 400 || ||||| Sbjct: 855 tcttgtaa 862
>emb|CR390628.1| Gallus gallus finished cDNA, clone ChEST353d21 Length = 581 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 333 gacaagtcaattgacaacaaagctttgcatgacacattttgtgtgtttggaaacattctt 392 ||||| |||||||| |||||||||||| |||||||||||| || ||||||||||| ||| Sbjct: 340 gacaaatcaattgataacaaagctttgtatgacacattttctgcttttggaaacatcctt 399 Query: 393 tcatgtaa 400 || ||||| Sbjct: 400 tcttgtaa 407
>gb|AF190655.1|AF190655 Nicotiana tabacum poly(A)-binding protein (PABP) mRNA, complete cds Length = 2364 Score = 71.9 bits (36), Expect = 2e-09 Identities = 192/244 (78%) Strand = Plus / Plus Query: 315 atatttattaagaatcttgacaagtcaattgacaacaaagctttgcatgacacattttgt 374 ||||||||||||||| | |||||| |||||||| ||||||| || ||||| ||||||| | Sbjct: 489 atatttattaagaatttggacaaggcaattgaccacaaagcattacatgatacattttct 548 Query: 375 gtgtttggaaacattctttcatgtaaagttgcaacagatcctgctggggaatcaaagggc 434 | |||||||| ||||| || ||||| || || ||| | |||| | || |||||| Sbjct: 549 gcatttggaaatattctctcttgtaaggtagctgtggattcatctggtcagtccaagggc 608 Query: 435 tatggctttgttcagtatgagcgggatgaggctgctcatgctgctattgagaaactcaat 494 ||||| ||||| |||||||| | || || ||||| || |||||||||||||| ||| Sbjct: 609 tatgggtttgtgcagtatgacagtgaagaagctgcccaaaaagctattgagaaactgaat 668 Query: 495 gggatgcttatgaatgacaagaaggtttatgttgggccttttgttcgtaagcaggagaga 554 || ||||| ||||||| ||| | || ||||| || || || ||||||||||| || ||| Sbjct: 669 ggtatgctgctgaatgataagcaagtatatgtaggacccttcgttcgtaagcatgaaaga 728 Query: 555 gata 558 |||| Sbjct: 729 gata 732
>gb|AF349964.1| Daucus carota poly(A)-binding protein mRNA, complete cds Length = 2491 Score = 67.9 bits (34), Expect = 4e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 432 ggctatggctttgttcagtatgagcgggatgaggctgctcatgctgctattgagaaactc 491 |||||||| |||||||||||||| | || || |||||||| |||||||||| || || Sbjct: 718 ggctatgggtttgttcagtatgatagtgaagaagctgctcagactgctattgacaagcta 777 Query: 492 aatgggatgcttatgaatgacaagaaggtttatgttgg 529 ||||| ||| | |||||||||||| | ||||||||||| Sbjct: 778 aatggcatgttgatgaatgacaagcaagtttatgttgg 815 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 312 aatatatttattaagaatcttgacaagtcaattgacaacaaagctttgcatgacacattt 371 ||||| ||||| ||||| | ||||||||||| || | |||||| |||||||| |||||| Sbjct: 598 aatatttttatcaagaacttggacaagtcaatagatatcaaagccttgcatgaaacattt 657 Query: 372 t 372 | Sbjct: 658 t 658
>ref|NM_103863.2| Arabidopsis thaliana PAB8; RNA binding / translation initiation factor AT1G49760 (PAB8) mRNA, complete cds Length = 2570 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 312 aatatatttattaagaatcttgacaagtcaattgacaacaaagc 355 |||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 660 aatatatttattaagaatcttgacaaatcaattgatcacaaagc 703
>gb|AY064622.1| Arabidopsis thaliana putative Poly-A Binding Protein (At1g49760; F14J22.3) mRNA, complete cds Length = 2091 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 312 aatatatttattaagaatcttgacaagtcaattgacaacaaagc 355 |||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 400 aatatatttattaagaatcttgacaaatcaattgatcacaaagc 443
>gb|AF370517.1|AF370517 Arabidopsis thaliana Putative Poly-A Binding Protein (F14J22.3) mRNA, complete cds Length = 2509 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 312 aatatatttattaagaatcttgacaagtcaattgacaacaaagc 355 |||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 660 aatatatttattaagaatcttgacaaatcaattgatcacaaagc 703
>ref|XM_473087.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1980 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 127 tgtccgtgcgtgtctgcagggacgtcacctcgcggaagtcgctcggatacgcctacgtca 186 |||| ||||| |||||||||||| ||| |||||| |||||||| ||||||||||||| Sbjct: 197 tgtcggtgcgcgtctgcagggacatcagctcgcgccgctcgctcggctacgcctacgtca 256 Query: 187 actacaaca 195 ||| ||||| Sbjct: 257 acttcaaca 265 Score = 42.1 bits (21), Expect = 2.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 492 aatgggatgcttatgaatgacaagaaggtttatgttgggccttttgttcgtaagcaggag 551 ||||||||||| || ||||| ||| ||||||||||| |||||| | || ||||| ||| Sbjct: 562 aatgggatgctgatcaatgataagcctgtttatgttggaccttttctccgcaagcaagag 621 Query: 552 agaga 556 ||||| Sbjct: 622 agaga 626 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 gtcgctgtacgtgggcgacct 67 ||||||||||||||||||||| Sbjct: 117 gtcgctgtacgtgggcgacct 137
>emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0116K07, complete sequence Length = 130779 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 127 tgtccgtgcgtgtctgcagggacgtcacctcgcggaagtcgctcggatacgcctacgtca 186 |||| ||||| |||||||||||| ||| |||||| |||||||| ||||||||||||| Sbjct: 57644 tgtcggtgcgcgtctgcagggacatcagctcgcgccgctcgctcggctacgcctacgtca 57585 Query: 187 actacaaca 195 ||| ||||| Sbjct: 57584 acttcaaca 57576 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 gtcgctgtacgtgggcgacct 67 ||||||||||||||||||||| Sbjct: 57724 gtcgctgtacgtgggcgacct 57704 Score = 42.1 bits (21), Expect = 2.2 Identities = 54/65 (83%) Strand = Plus / Minus Query: 492 aatgggatgcttatgaatgacaagaaggtttatgttgggccttttgttcgtaagcaggag 551 ||||||||||| || ||||| ||| ||||||||||| |||||| | || ||||| ||| Sbjct: 55610 aatgggatgctgatcaatgataagcctgtttatgttggaccttttctccgcaagcaagag 55551 Query: 552 agaga 556 ||||| Sbjct: 55550 agaga 55546
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 127 tgtccgtgcgtgtctgcagggacgtcacctcgcggaagtcgctcggatacgcctacgtca 186 |||| ||||| |||||||||||| ||| |||||| |||||||| ||||||||||||| Sbjct: 25175977 tgtcggtgcgcgtctgcagggacatcagctcgcgccgctcgctcggctacgcctacgtca 25175918 Query: 187 actacaaca 195 ||| ||||| Sbjct: 25175917 acttcaaca 25175909 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 33806049 gctgcggctgcggcggcggcg 33806069 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 gtcgctgtacgtgggcgacct 67 ||||||||||||||||||||| Sbjct: 25176057 gtcgctgtacgtgggcgacct 25176037 Score = 42.1 bits (21), Expect = 2.2 Identities = 54/65 (83%) Strand = Plus / Minus Query: 492 aatgggatgcttatgaatgacaagaaggtttatgttgggccttttgttcgtaagcaggag 551 ||||||||||| || ||||| ||| ||||||||||| |||||| | || ||||| ||| Sbjct: 25173943 aatgggatgctgatcaatgataagcctgtttatgttggaccttttctccgcaagcaagag 25173884 Query: 552 agaga 556 ||||| Sbjct: 25173883 agaga 25173879 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcg 26 |||||| |||||||||||||||||| Sbjct: 18549751 ggcggcggctgcggctgcggcggcg 18549727 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 gccgctgcggctgcggcggcggcg 29 |||||||| ||||||||||||||| Sbjct: 27345517 gccgctgccgctgcggcggcggcg 27345540 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcggcg 29 |||||| ||||| ||||||||||||||| Sbjct: 26449318 ggcggctgctgctgctgcggcggcggcg 26449345 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 5 ggccgctgcggctgcggcggcggcgtcgtcgt 36 ||||||||| || | ||||||||||||||||| Sbjct: 24415561 ggccgctgctgcggtggcggcggcgtcgtcgt 24415530 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcggcg 29 |||||| ||||| ||||||||||||||| Sbjct: 21603586 ggcggctgctgctgctgcggcggcggcg 21603613 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 cggctgcggcggcggcgtcgtcgt 36 |||| ||||||||||||||||||| Sbjct: 20528503 cggcggcggcggcggcgtcgtcgt 20528480 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 gcggctgcggcggcggcgtcgtcg 35 ||||| |||||||||||||||||| Sbjct: 20147116 gcggcggcggcggcggcgtcgtcg 20147139 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 gcggctgcggcggcggcgtc 31 |||||||||||||||||||| Sbjct: 11873912 gcggctgcggcggcggcgtc 11873893
>dbj|AK067210.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096J03, full insert sequence Length = 2549 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 127 tgtccgtgcgtgtctgcagggacgtcacctcgcggaagtcgctcggatacgcctacgtca 186 |||| ||||| |||||||||||| ||| |||||| |||||||| ||||||||||||| Sbjct: 477 tgtcggtgcgcgtctgcagggacatcagctcgcgccgctcgctcggctacgcctacgtca 536 Query: 187 actacaaca 195 ||| ||||| Sbjct: 537 acttcaaca 545 Score = 42.1 bits (21), Expect = 2.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 492 aatgggatgcttatgaatgacaagaaggtttatgttgggccttttgttcgtaagcaggag 551 ||||||||||| || ||||| ||| ||||||||||| |||||| | || ||||| ||| Sbjct: 842 aatgggatgctgatcaatgataagcctgtttatgttggaccttttctccgcaagcaagag 901 Query: 552 agaga 556 ||||| Sbjct: 902 agaga 906 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 gtcgctgtacgtgggcgacct 67 ||||||||||||||||||||| Sbjct: 397 gtcgctgtacgtgggcgacct 417
>dbj|AK064269.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-E03, full insert sequence Length = 1496 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 127 tgtccgtgcgtgtctgcagggacgtcacctcgcggaagtcgctcggatacgcctacgtca 186 |||| ||||| |||||||||||| ||| |||||| |||||||| ||||||||||||| Sbjct: 1235 tgtcggtgcgcgtctgcagggacatcagctcgcgccgctcgctcggctacgcctacgtca 1176 Query: 187 actacaaca 195 ||| ||||| Sbjct: 1175 acttcaaca 1167 Score = 42.1 bits (21), Expect = 2.2 Identities = 54/65 (83%) Strand = Plus / Minus Query: 492 aatgggatgcttatgaatgacaagaaggtttatgttgggccttttgttcgtaagcaggag 551 ||||||||||| || ||||| ||| ||||||||||| |||||| | || ||||| ||| Sbjct: 870 aatgggatgctgatcaatgataagcctgtttatgttggaccttttctccgcaagcaagag 811 Query: 552 agaga 556 ||||| Sbjct: 810 agaga 806
>emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014K14, complete sequence Length = 150187 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 127 tgtccgtgcgtgtctgcagggacgtcacctcgcggaagtcgctcggatacgcctacgtca 186 |||| ||||| |||||||||||| ||| |||||| |||||||| ||||||||||||| Sbjct: 123404 tgtcggtgcgcgtctgcagggacatcagctcgcgccgctcgctcggctacgcctacgtca 123345 Query: 187 actacaaca 195 ||| ||||| Sbjct: 123344 acttcaaca 123336 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 gtcgctgtacgtgggcgacct 67 ||||||||||||||||||||| Sbjct: 123484 gtcgctgtacgtgggcgacct 123464 Score = 42.1 bits (21), Expect = 2.2 Identities = 54/65 (83%) Strand = Plus / Minus Query: 492 aatgggatgcttatgaatgacaagaaggtttatgttgggccttttgttcgtaagcaggag 551 ||||||||||| || ||||| ||| ||||||||||| |||||| | || ||||| ||| Sbjct: 121370 aatgggatgctgatcaatgataagcctgtttatgttggaccttttctccgcaagcaagag 121311 Query: 552 agaga 556 ||||| Sbjct: 121310 agaga 121306
>gb|BC052100.1| Xenopus laevis poly(A) binding protein, cytoplasmic 1, mRNA (cDNA clone MGC:53109 IMAGE:5542430), complete cds Length = 2415 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 333 gacaagtcaattgacaacaaagctttgcatgacacattttgtgtgtttggaaacattctt 392 |||||||| ||||| |||||||| ||| | || ||||||| || ||||||||||||||| Sbjct: 712 gacaagtctattgataacaaagccttgtacgatacattttctgcatttggaaacattctt 771 Query: 393 tcatgtaa 400 || ||||| Sbjct: 772 tcctgtaa 779
>emb|X57483.1|XLPBP X.laevis variant mRNA (X ABP 12-5) for poly(A) binding protein Length = 2582 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 333 gacaagtcaattgacaacaaagctttgcatgacacattttgtgtgtttggaaacattctt 392 |||||||| ||||| |||||||| ||| | || ||||||| || ||||||||||||||| Sbjct: 471 gacaagtctattgataacaaagccttgtacgatacattttctgcatttggaaacattctt 530 Query: 393 tcatgtaa 400 || ||||| Sbjct: 531 tcctgtaa 538
>gb|M27072.1|XELABPEF Xenopus laevis poly(A)-binding protein (ABP-EF) mRNA, complete cds Length = 2545 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 333 gacaagtcaattgacaacaaagctttgcatgacacattttgtgtgtttggaaacattctt 392 |||||||| ||||| |||||||| ||| | || ||||||| || ||||||||||||||| Sbjct: 400 gacaagtctattgataacaaagccttgtacgatacattttctgcatttggaaacattctt 459 Query: 393 tcatgtaa 400 || ||||| Sbjct: 460 tcctgtaa 467
>gb|BC076956.1| Xenopus tropicalis MGC89376 protein, mRNA (cDNA clone MGC:89376 IMAGE:6988840), complete cds Length = 2622 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 316 tatttattaagaatcttgacaagtcaattgacaacaaagctttgcatgacacatt 370 |||||||||| ||| | ||| |||| |||||||||||||| ||| |||||||||| Sbjct: 410 tatttattaaaaatttagacgagtccattgacaacaaagccttgtatgacacatt 464
>emb|CT030366.1| Xenopus tropicalis finished cDNA, clone TEgg106h20 Length = 2305 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 316 tatttattaagaatcttgacaagtcaattgacaacaaagctttgcatgacacatt 370 |||||||||| ||| | ||| |||| |||||||||||||| ||| |||||||||| Sbjct: 419 tatttattaaaaatttagacgagtccattgacaacaaagccttgtatgacacatt 473
>ref|NM_001005062.1| Xenopus tropicalis MGC89376 protein (MGC89376), mRNA Length = 2622 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 316 tatttattaagaatcttgacaagtcaattgacaacaaagctttgcatgacacatt 370 |||||||||| ||| | ||| |||| |||||||||||||| ||| |||||||||| Sbjct: 410 tatttattaaaaatttagacgagtccattgacaacaaagccttgtatgacacatt 464
>gb|BC053126.1| Danio rerio poly(A) binding protein, cytoplasmic 4 (inducible form), mRNA (cDNA clone MGC:63875 IMAGE:6789528), complete cds Length = 2582 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Plus Query: 316 tatttattaagaatcttgacaagtcaattgacaacaaagctttgcatgacacattttgtg 375 ||||||| || ||||| |||||||| || |||||||||||| || ||||||| || | || Sbjct: 487 tatttatcaaaaatctggacaagtccatcgacaacaaagctctgtatgacaccttctctg 546 Query: 376 tgtttggaaacat 388 ||||||||||| Sbjct: 547 cctttggaaacat 559
>emb|CR392364.6| Zebrafish DNA sequence from clone CH211-230I4 in linkage group 17, complete sequence Length = 91506 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Plus Query: 316 tatttattaagaatcttgacaagtcaattgacaacaaagctttgcatgacacattttgtg 375 ||||||| || ||||| |||||||| || |||||||||||| || ||||||| || | || Sbjct: 79389 tatttatcaaaaatctggacaagtccatcgacaacaaagctctgtatgacaccttctctg 79448 Query: 376 tgtttggaaacat 388 ||||||||||| Sbjct: 79449 cctttggaaacat 79461
>ref|NM_201296.1| Danio rerio poly(A) binding protein, cytoplasmic 4 (inducible form) (pabpc4), mRNA Length = 2582 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Plus Query: 316 tatttattaagaatcttgacaagtcaattgacaacaaagctttgcatgacacattttgtg 375 ||||||| || ||||| |||||||| || |||||||||||| || ||||||| || | || Sbjct: 487 tatttatcaaaaatctggacaagtccatcgacaacaaagctctgtatgacaccttctctg 546 Query: 376 tgtttggaaacat 388 ||||||||||| Sbjct: 547 cctttggaaacat 559
>ref|XM_470162.1| Oryza sativa (japonica cultivar-group), mRNA Length = 608 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 6 gccgctgcggctgcggcggcggcg 29 |||||||||||||||||||||||| Sbjct: 31 gccgctgcggctgcggcggcggcg 54
>ref|NM_191915.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 501 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcggcg 29 |||||| ||||||||||||||||||||| Sbjct: 248 ggcggcggctgcggctgcggcggcggcg 221
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 6 gccgctgcggctgcggcggcggcg 29 |||||||||||||||||||||||| Sbjct: 34655394 gccgctgcggctgcggcggcggcg 34655371 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcgg 27 |||||| ||||||||||||||||||| Sbjct: 32491104 ggcggcggctgcggctgcggcggcgg 32491129 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 11211001 gctgcggctgcggcggcggcg 11210981 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 gcggctgcggcggcggcgtcgtcg 35 ||||| |||||||||||||||||| Sbjct: 34960557 gcggcggcggcggcggcgtcgtcg 34960580 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctgcggctgcggcggcggcg 29 |||||||||||||||||||| Sbjct: 34897338 ctgcggctgcggcggcggcg 34897319 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggc 28 |||||||||||||||||||| Sbjct: 32250341 gctgcggctgcggcggcggc 32250360 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 gccgctgcggctgcggcggcggcg 29 ||||| |||||||||||||||||| Sbjct: 26442837 gccgcggcggctgcggcggcggcg 26442860 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 gcggctgcggcggcggcgtcgtcg 35 ||||| |||||||||||||||||| Sbjct: 14579730 gcggcggcggcggcggcgtcgtcg 14579707 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcgtcg 32 ||||| |||||||||||||||||| Sbjct: 5520129 gctgctgctgcggcggcggcgtcg 5520152 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 gcggctgcggcggcggcgtcgtcg 35 ||||| |||||||||||||||||| Sbjct: 4041759 gcggcggcggcggcggcgtcgtcg 4041736
>gb|AY138839.1| Oryctolagus cuniculus Shaw type potassium channel Kv3.3 (KCNC3) mRNA, complete cds Length = 2337 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcggcg 29 |||||| ||||||||||||||||||||| Sbjct: 180 ggcggcggctgcggctgcggcggcggcg 153
>gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genomic sequence, complete sequence Length = 164236 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 6 gccgctgcggctgcggcggcggcg 29 |||||||||||||||||||||||| Sbjct: 113111 gccgctgcggctgcggcggcggcg 113088
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 6 gccgctgcggctgcggcggcggcg 29 |||||||||||||||||||||||| Sbjct: 34745466 gccgctgcggctgcggcggcggcg 34745443 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcgg 27 |||||| ||||||||||||||||||| Sbjct: 32581614 ggcggcggctgcggctgcggcggcgg 32581639 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 11207764 gctgcggctgcggcggcggcg 11207744 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 gcggctgcggcggcggcgtcgtcg 35 ||||| |||||||||||||||||| Sbjct: 35050629 gcggcggcggcggcggcgtcgtcg 35050652 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctgcggctgcggcggcggcg 29 |||||||||||||||||||| Sbjct: 34987410 ctgcggctgcggcggcggcg 34987391 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggc 28 |||||||||||||||||||| Sbjct: 32340853 gctgcggctgcggcggcggc 32340872 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 gccgctgcggctgcggcggcggcg 29 ||||| |||||||||||||||||| Sbjct: 26534146 gccgcggcggctgcggcggcggcg 26534169 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 gcggctgcggcggcggcgtcgtcg 35 ||||| |||||||||||||||||| Sbjct: 14574705 gcggcggcggcggcggcgtcgtcg 14574682 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcgtcg 32 ||||| |||||||||||||||||| Sbjct: 5519344 gctgctgctgcggcggcggcgtcg 5519367 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 gcggctgcggcggcggcgtcgtcg 35 ||||| |||||||||||||||||| Sbjct: 4041870 gcggcggcggcggcggcgtcgtcg 4041847
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcggcg 29 |||||| ||||||||||||||||||||| Sbjct: 27229981 ggcggcggctgcggctgcggcggcggcg 27229954 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcgtcg 32 |||||||||||||||||||||||| Sbjct: 18069763 gctgcggctgcggcggcggcgtcg 18069786 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcgt 30 |||||||||||||||||||||| Sbjct: 40279467 gctgcggctgcggcggcggcgt 40279488 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 gctgcggcggcggcgtcgtcgt 36 |||||||||||||||||||||| Sbjct: 28786503 gctgcggcggcggcgtcgtcgt 28786482 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 40482161 gctgcggctgcggcggcggcg 40482181 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 30724510 gctgcggctgcggcggcggcg 30724530 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 9180688 gctgcggctgcggcggcggcg 9180668 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 8241727 gctgcggctgcggcggcggcg 8241747 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tgcggctgcggcggcggcgtcgtc 34 |||||| ||||||||||||||||| Sbjct: 42766066 tgcggcggcggcggcggcgtcgtc 42766043 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 6 gccgctgcggctgcggcggcggcg 29 ||||| |||||||||||||||||| Sbjct: 39292729 gccgcggcggctgcggcggcggcg 39292706 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 gcggctgcggcggcggcgtcgtcg 35 ||||| |||||||||||||||||| Sbjct: 33129689 gcggcggcggcggcggcgtcgtcg 33129666 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 gcggctgcggcggcggcgtcgtcg 35 ||||| |||||||||||||||||| Sbjct: 33109061 gcggcggcggcggcggcgtcgtcg 33109038 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggc 28 |||||||||||||||||||| Sbjct: 25231238 gctgcggctgcggcggcggc 25231257 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctgcggctgcggcggcggcg 29 |||||||||||||||||||| Sbjct: 12853355 ctgcggctgcggcggcggcg 12853336 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 21 gcggcggcgtcgtcgttcccggccacgt 48 |||||| |||||||||||||| |||||| Sbjct: 8995374 gcggcgtcgtcgtcgttcccgaccacgt 8995401 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 gctgcggctgcggcggcggc 28 |||||||||||||||||||| Sbjct: 6024268 gctgcggctgcggcggcggc 6024249 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 gcggctgcggcggcggcgtcgtcg 35 ||||| |||||||||||||||||| Sbjct: 4430965 gcggcggcggcggcggcgtcgtcg 4430942
>dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0063G05 Length = 182681 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcggcg 29 |||||| ||||||||||||||||||||| Sbjct: 10498 ggcggcggctgcggctgcggcggcggcg 10471
>dbj|AP003213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0054L14 Length = 150022 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcgtcg 32 |||||||||||||||||||||||| Sbjct: 97004 gctgcggctgcggcggcggcgtcg 97027
>dbj|AP002970.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504D03 Length = 139201 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcgtcg 32 |||||||||||||||||||||||| Sbjct: 46204 gctgcggctgcggcggcggcgtcg 46227
>dbj|AK101289.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033G01, full insert sequence Length = 685 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 6 gccgctgcggctgcggcggcggcg 29 |||||||||||||||||||||||| Sbjct: 108 gccgctgcggctgcggcggcggcg 131
>dbj|AK064663.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-A10, full insert sequence Length = 722 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcggcg 29 |||||| ||||||||||||||||||||| Sbjct: 214 ggcggcggctgcggctgcggcggcggcg 187
>gb|AY650320.1| Macaca fascicularis achaete-scute complex protein 1 mRNA, partial cds Length = 671 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 3 gcggccgctgcggctgcggcggc 25 ||||||||||||||||||||||| Sbjct: 137 gcggccgctgcggctgcggcggc 115
>ref|XM_480994.1| Oryza sativa (japonica cultivar-group), mRNA Length = 948 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcggcgtcg 32 |||||| || ||||||||||||||||||||| Sbjct: 144 ggcggcggcggcggctgcggcggcggcgtcg 114
>ref|XM_466406.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1548 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 12 gcggctgcggcggcggcgtcgtcgttcccgg 42 ||||| |||||||||||||||||||| |||| Sbjct: 1106 gcggcggcggcggcggcgtcgtcgttgccgg 1076
>ref|XM_478083.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1036 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 6 gccgctgcggctgcggcggcggcgtcg 32 ||||||||||| ||||||||||||||| Sbjct: 113 gccgctgcggcggcggcggcggcgtcg 139
>ref|XM_548237.2| PREDICTED: Canis familiaris similar to glycerophosphodiester phosphodiesterase domain containing 1 (LOC491117), mRNA Length = 1233 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 3 gcggccgctgcggctgcggcggcggcg 29 ||||| ||||||||||||||||||||| Sbjct: 219 gcggcggctgcggctgcggcggcggcg 193
>emb|BX855620.10| Zebrafish DNA sequence from clone DKEY-9M4 in linkage group 15, complete sequence Length = 33169 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 3 gcggccgctgcggctgcggcggcggcg 29 ||||||||||| ||||||||||||||| Sbjct: 4090 gcggccgctgctgctgcggcggcggcg 4116
>emb|Z95396.2|SPAC57A7 S.pombe chromosome I cosmid c57A7 Length = 39101 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 472 atgctgctattgagaaactcaatgggatgcttatgaatgacaagaaggtttatgt 526 |||||||||| ||| | ||||||| |||||| |||| ||||| ||||||||||| Sbjct: 30827 atgctgctatcgagcatgtcaatggcatgcttttgaacgacaaaaaggtttatgt 30881
>gb|AF418291.1| Homo sapiens clone 17 myosin XVBP (MYO15B) pseudogene, partial sequence Length = 4802 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcggc 28 |||||| |||||||||||||||||||| Sbjct: 1142 ggcggcggctgcggctgcggcggcggc 1168
>gb|AF418290.1| Homo sapiens clone 15 myosin XVBP (MYO15B) pseudogene, partial sequence Length = 7925 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcggc 28 |||||| |||||||||||||||||||| Sbjct: 1142 ggcggcggctgcggctgcggcggcggc 1168
>gb|AF418289.1| Homo sapiens clone 11 myosin XVBP (MYO15B) pseudogene, partial sequence Length = 5709 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcggc 28 |||||| |||||||||||||||||||| Sbjct: 1142 ggcggcggctgcggctgcggcggcggc 1168
>gb|AF418288.1| Homo sapiens clone 9 myosin XVBP (MYO15B) pseudogene, partial sequence Length = 5424 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcggc 28 |||||| |||||||||||||||||||| Sbjct: 1142 ggcggcggctgcggctgcggcggcggc 1168
>gb|AF418287.1| Homo sapiens clone 8 myosin XVBP (MYO15B) pseudogene, partial sequence Length = 4462 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcggc 28 |||||| |||||||||||||||||||| Sbjct: 1142 ggcggcggctgcggctgcggcggcggc 1168
>gb|AF418286.1| Homo sapiens clone 1 myosin XVBP (MYO15B) pseudogene, partial sequence Length = 7515 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcggc 28 |||||| |||||||||||||||||||| Sbjct: 1142 ggcggcggctgcggctgcggcggcggc 1168
>ref|XR_000968.1| PREDICTED: Homo sapiens myosin XVB pseudogene, transcript variant 31 (MYO15B), misc RNA Length = 9166 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcggc 28 |||||| |||||||||||||||||||| Sbjct: 1136 ggcggcggctgcggctgcggcggcggc 1162
>ref|XR_000969.1| PREDICTED: Homo sapiens myosin XVB pseudogene, transcript variant 32 (MYO15B), misc RNA Length = 9397 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcggc 28 |||||| |||||||||||||||||||| Sbjct: 1136 ggcggcggctgcggctgcggcggcggc 1162
>ref|XR_000967.1| PREDICTED: Homo sapiens myosin XVB pseudogene, transcript variant 30 (MYO15B), misc RNA Length = 9008 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcggc 28 |||||| |||||||||||||||||||| Sbjct: 1136 ggcggcggctgcggctgcggcggcggc 1162
>ref|XR_000964.1| PREDICTED: Homo sapiens myosin XVB pseudogene, transcript variant 27 (MYO15B), misc RNA Length = 7901 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcggc 28 |||||| |||||||||||||||||||| Sbjct: 1136 ggcggcggctgcggctgcggcggcggc 1162
>ref|XR_000965.1| PREDICTED: Homo sapiens myosin XVB pseudogene, transcript variant 28 (MYO15B), misc RNA Length = 5202 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcggc 28 |||||| |||||||||||||||||||| Sbjct: 1136 ggcggcggctgcggctgcggcggcggc 1162
>ref|NM_001018809.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC57A7.04c), partial mRNA Length = 1962 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 472 atgctgctattgagaaactcaatgggatgcttatgaatgacaagaaggtttatgt 526 |||||||||| ||| | ||||||| |||||| |||| ||||| ||||||||||| Sbjct: 665 atgctgctatcgagcatgtcaatggcatgcttttgaacgacaaaaaggtttatgt 719
>gb|AF378546.1|AF378546 Ophiostoma novo-ulmi clone 7 polyadenylate binding protein-like protein mRNA, partial cds Length = 381 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 165 tcgctcggatacgcctacgtcaactacaaca 195 ||||| || |||||||||||||||||||||| Sbjct: 321 tcgctgggctacgcctacgtcaactacaaca 351
>tpg|BK000056.1| TPA: TPA_exp: Homo sapiens myosin unconventional myosin XVBP pseudogene mRNA, complete sequence Length = 9021 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcggc 28 |||||| |||||||||||||||||||| Sbjct: 1142 ggcggcggctgcggctgcggcggcggc 1168
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 6 gccgctgcggctgcggcggcggcgtcg 32 ||||||||||| ||||||||||||||| Sbjct: 17346558 gccgctgcggcggcggcggcggcgtcg 17346584 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 18 gcggcggcggcgtcgtcgttcccggc 43 |||||||||||||||||||| ||||| Sbjct: 20312489 gcggcggcggcgtcgtcgttgccggc 20312464 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 gcggctgcggcggcggcgtcg 32 ||||||||||||||||||||| Sbjct: 3812720 gcggctgcggcggcggcgtcg 3812740 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcggcg 29 |||||| |||||||| |||||||||||| Sbjct: 16879040 ggcggcggctgcggcggcggcggcggcg 16879013 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ggcggcggcgtcgtcgttcc 39 |||||||||||||||||||| Sbjct: 1598461 ggcggcggcgtcgtcgttcc 1598480
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 12 gcggctgcggcggcggcgtcgtcgttcccgg 42 ||||| |||||||||||||||||||| |||| Sbjct: 22223253 gcggcggcggcggcggcgtcgtcgttgccgg 22223223 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 gctgcggcggcggcgtcgtcgt 36 |||||||||||||||||||||| Sbjct: 4558949 gctgcggcggcggcgtcgtcgt 4558970 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 1075367 gctgcggctgcggcggcggcg 1075347 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 96622 gctgcggctgcggcggcggcg 96642 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 gcggctgcggcggcggcgtcgtcg 35 ||||| |||||||||||||||||| Sbjct: 29383553 gcggcggcggcggcggcgtcgtcg 29383530 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcggcg 29 |||||| ||||| ||||||||||||||| Sbjct: 18761444 ggcggctgctgctgctgcggcggcggcg 18761417 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcggcg 29 ||||||||| ||||||||||||| |||| Sbjct: 6958396 ggcggccgcggcggctgcggcggaggcg 6958369 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcggcg 29 ||||||||| ||||| |||||||||||| Sbjct: 2331761 ggcggccgcggcggcggcggcggcggcg 2331734
>ref|XM_394401.2| PREDICTED: Apis mellifera similar to thr4 (LOC410925), mRNA Length = 2490 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 gcggccgctgcggctgcggcggc 25 ||||||||||||||||||||||| Sbjct: 985 gcggccgctgcggctgcggcggc 1007
>gb|AC087749.12| Homo sapiens chromosome 17, clone RP11-474I11, complete sequence Length = 216161 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcggc 28 |||||| |||||||||||||||||||| Sbjct: 33686 ggcggcggctgcggctgcggcggcggc 33712
>dbj|AP005261.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0640E12 Length = 167353 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 6 gccgctgcggctgcggcggcggcgtcg 32 ||||||||||| ||||||||||||||| Sbjct: 151683 gccgctgcggcggcggcggcggcgtcg 151709
>dbj|AP005495.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0003H03 Length = 157905 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcggcgtcg 32 |||||| || ||||||||||||||||||||| Sbjct: 127670 ggcggcggcggcggctgcggcggcggcgtcg 127640
>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0434A03 Length = 146505 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 6 gccgctgcggctgcggcggcggcgtcg 32 ||||||||||| ||||||||||||||| Sbjct: 14782 gccgctgcggcggcggcggcggcgtcg 14808
>dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1342F01 Length = 153287 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 12 gcggctgcggcggcggcgtcgtcgttcccgg 42 ||||| |||||||||||||||||||| |||| Sbjct: 119097 gcggcggcggcggcggcgtcgtcgttgccgg 119067
>dbj|AP005799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0012K14 Length = 155544 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcggcgtcg 32 |||||| || ||||||||||||||||||||| Sbjct: 52854 ggcggcggcggcggctgcggcggcggcgtcg 52824
>dbj|AK103576.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132P09, full insert sequence Length = 1036 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 6 gccgctgcggctgcggcggcggcgtcg 32 ||||||||||| ||||||||||||||| Sbjct: 113 gccgctgcggcggcggcggcggcgtcg 139
>emb|AJ324503.1|HSA324503 Homo sapiens genomic sequence surrounding NotI site, clone NR5-HI18R Length = 843 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcggc 28 |||||||||||||||||| |||||||| Sbjct: 158 ggcggccgctgcggctgccgcggcggc 184
>gb|AY105702.1| Zea mays PCO125609 mRNA sequence Length = 1889 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcggcgtcgtcgt 36 |||||| || ||||| ||||||||||||||||||| Sbjct: 1198 ggcggcggcggcggcggcggcggcggcgtcgtcgt 1164
>gb|AF043297.1|AF043297 Chlamydomonas reinhardtii poly(A) binding protein RB47 (PABP) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 2846 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 165 tcgctcggatacgcctacgtcaactacaaca 195 ||||| || |||||||||||||||||||||| Sbjct: 383 tcgctgggctacgcctacgtcaactacaaca 413
>gb|M64603.1|YSPPABP Schizosaccharomyces pombe poly(A)-binding protein mRNA, 5' cds Length = 1884 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 472 atgctgctattgagaaactcaatgggatgcttatgaatgacaagaaggtttatgt 526 |||||||||| ||| | ||||||| |||||| |||| ||||| ||||||||||| Sbjct: 623 atgctgctatcgagcatgtcaatggcatgcttttgaacgacaaaaaggtttatgt 677
>dbj|AB048759.1| Lampetra japonica mRNA for homeoprotein LjDLX1/6, complete cds Length = 2474 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcggc 28 |||||| |||||||||||||||||||| Sbjct: 380 ggcggcggctgcggctgcggcggcggc 354
>dbj|AB001868.1| Anolis carolinensis Brain-1 gene, complete cds Length = 1709 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcggc 28 ||||||||| ||||||||||||||||| Sbjct: 361 ggcggccgcggcggctgcggcggcggc 335 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcg 26 |||||| |||||||||||||||||| Sbjct: 343 ggcggcggctgcggctgcggcggcg 319
>gb|AY831392.1| Oryza sativa (indica cultivar-group) BTH-induced ERF transcriptional factor 1 (BIERF1) mRNA, complete cds Length = 1613 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 4 cggccgctgcggctgcggcggcggcg 29 ||||||||||||| |||||||||||| Sbjct: 60 cggccgctgcggcggcggcggcggcg 85
>ref|XM_464338.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1047 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 gctgcggcggcggcgtcgtcgt 36 |||||||||||||||||||||| Sbjct: 111 gctgcggcggcggcgtcgtcgt 132
>gb|BC083176.1| Rattus norvegicus poly(A) binding protein, cytoplasmic 1, mRNA (cDNA clone MGC:91496 IMAGE:7097075), complete cds Length = 2824 Score = 44.1 bits (22), Expect = 0.56 Identities = 70/86 (81%) Strand = Plus / Plus Query: 315 atatttattaagaatcttgacaagtcaattgacaacaaagctttgcatgacacattttgt 374 ||||| ||||| ||| | ||||| || |||||||| ||||| || |||| || |||| | Sbjct: 744 atattcattaaaaatttggacaaatccattgacaataaagcactgtatgatacgttttct 803 Query: 375 gtgtttggaaacattctttcatgtaa 400 | |||||| ||||| ||||||||||| Sbjct: 804 gcgtttggtaacatcctttcatgtaa 829
>gb|AC134053.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0005H02, complete sequence Length = 144882 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcgg 27 |||||| ||||||||||||||||||| Sbjct: 48980 ggcggcggctgcggctgcggcggcgg 48955
>gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 genomic sequence, complete sequence Length = 145507 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcgg 27 |||||| ||||||||||||||||||| Sbjct: 143232 ggcggcggctgcggctgcggcggcgg 143257
>ref|XM_324155.1| Neurospora crassa OR74A hypothetical protein (NCU04799.1) partial mRNA Length = 2295 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 168 ctcggatacgcctacgtcaactacaacacc 197 ||||| || ||||||||||||||||||||| Sbjct: 301 ctcggctatgcctacgtcaactacaacacc 330
>ref|XM_955332.1| Neurospora crassa OR74A hypothetical protein (NCU04799.1) partial mRNA Length = 2295 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 168 ctcggatacgcctacgtcaactacaacacc 197 ||||| || ||||||||||||||||||||| Sbjct: 301 ctcggctatgcctacgtcaactacaacacc 330
>gb|AY459344.1| Oryza sativa (japonica cultivar-group) clone CL034867.1 R2R3-MYB gene region Length = 49192 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 gctgcggcggcggcgtcgtcgt 36 |||||||||||||||||||||| Sbjct: 11430 gctgcggcggcggcgtcgtcgt 11451
>gb|BC015958.2| Homo sapiens poly(A) binding protein, cytoplasmic 1, mRNA (cDNA clone MGC:15290 IMAGE:3940309), complete cds Length = 2777 Score = 44.1 bits (22), Expect = 0.56 Identities = 70/86 (81%) Strand = Plus / Plus Query: 315 atatttattaagaatcttgacaagtcaattgacaacaaagctttgcatgacacattttgt 374 ||||| ||||| ||||| ||||| || ||||| || ||||| || |||| ||||||| | Sbjct: 700 atattcattaaaaatctggacaaatccattgataataaagcactgtatgatacattttct 759 Query: 375 gtgtttggaaacattctttcatgtaa 400 | ||||| ||||| ||||||||||| Sbjct: 760 gcttttggtaacatcctttcatgtaa 785
>ref|NM_002568.3| Homo sapiens poly(A) binding protein, cytoplasmic 1 (PABPC1), mRNA Length = 2869 Score = 44.1 bits (22), Expect = 0.56 Identities = 70/86 (81%) Strand = Plus / Plus Query: 315 atatttattaagaatcttgacaagtcaattgacaacaaagctttgcatgacacattttgt 374 ||||| ||||| ||||| ||||| || ||||| || ||||| || |||| ||||||| | Sbjct: 805 atattcattaaaaatctggacaaatccattgataataaagcactgtatgatacattttct 864 Query: 375 gtgtttggaaacattctttcatgtaa 400 | ||||| ||||| ||||||||||| Sbjct: 865 gcttttggtaacatcctttcatgtaa 890
>emb|X57158.1|CHCHOXM Chicken CHOX M mRNA for HOX-4.3-related protein Length = 1263 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcgg 27 |||||| ||||||||||||||||||| Sbjct: 207 ggcggcggctgcggctgcggcggcgg 232
>emb|AJ576039.1|GWE576039 Gordonia westfalica strain DSM44215T plasmid pKB1 complete genome Length = 101016 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 89 gcagctcttcgacgtcttcgcc 110 |||||||||||||||||||||| Sbjct: 24386 gcagctcttcgacgtcttcgcc 24365
>emb|AJ298278.1|RNO298278 Rattus norvegicus mRNA for poly(A) binding protein (pabp1 gene) Length = 2190 Score = 44.1 bits (22), Expect = 0.56 Identities = 70/86 (81%) Strand = Plus / Plus Query: 315 atatttattaagaatcttgacaagtcaattgacaacaaagctttgcatgacacattttgt 374 ||||| ||||| ||| | ||||| || |||||||| ||||| || |||| || |||| | Sbjct: 500 atattcattaaaaatttggacaaatccattgacaataaagcactgtatgatacgttttct 559 Query: 375 gtgtttggaaacattctttcatgtaa 400 | |||||| ||||| ||||||||||| Sbjct: 560 gcgtttggtaacatcctttcatgtaa 585
>gb|AC083868.3| Homo sapiens chromosome 7 clone RP11-148L5, complete sequence Length = 183541 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gggcggccgctgcggctgcggc 22 |||||||||||||||||||||| Sbjct: 78435 gggcggccgctgcggctgcggc 78456
>dbj|AK095194.1| Homo sapiens cDNA FLJ37875 fis, clone BRSSN2018771, highly similar to POLYADENYLATE-BINDING PROTEIN 1 Length = 2351 Score = 44.1 bits (22), Expect = 0.56 Identities = 70/86 (81%) Strand = Plus / Plus Query: 315 atatttattaagaatcttgacaagtcaattgacaacaaagctttgcatgacacattttgt 374 ||||| ||||| ||||| ||||| || ||||| || ||||| || |||| ||||||| | Sbjct: 640 atattcattaaaaatctggacaaatccattgataataaagcactgtatgatacattttct 699 Query: 375 gtgtttggaaacattctttcatgtaa 400 | ||||| ||||| ||||||||||| Sbjct: 700 gcttttggtaacatcctttcatgtaa 725
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 12 gcggctgcggcggcggcgtcgt 33 |||||||||||||||||||||| Sbjct: 453227 gcggctgcggcggcggcgtcgt 453248
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcgg 27 |||||| ||||||||||||||||||| Sbjct: 1721301 ggcggcggctgcggctgcggcggcgg 1721326 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 4 cggccgctgcggctgcggcggcggcg 29 |||| ||||||||||||||||||||| Sbjct: 1721237 cggcggctgcggctgcggcggcggcg 1721262 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 19184271 gctgcggctgcggcggcggcg 19184291 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 3862839 gctgcggctgcggcggcggcg 3862859 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 tgcggctgcggcggcggcgt 30 |||||||||||||||||||| Sbjct: 4463159 tgcggctgcggcggcggcgt 4463178 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggc 28 |||||||||||||||||||| Sbjct: 3301729 gctgcggctgcggcggcggc 3301748
>gb|AC007819.8|AC007819 Drosophila melanogaster, chromosome 3R, region 98C-98C, BAC clone BACR06K21, complete sequence Length = 189649 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 424 aatcaaagggctatggctttgt 445 |||||||||||||||||||||| Sbjct: 142709 aatcaaagggctatggctttgt 142730
>gb|AC009345.7|AC009345 Drosophila melanogaster, chromosome 3R, region 98C-98C, BAC clone BACR28F20, complete sequence Length = 158895 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 424 aatcaaagggctatggctttgt 445 |||||||||||||||||||||| Sbjct: 17897 aatcaaagggctatggctttgt 17918
>gb|AY010119.1| Petromyzon marinus homeodomain protein DlxD (DlxD) mRNA, complete cds Length = 2390 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 gcggccgctgcggctgcggcggcggc 28 ||||| |||||||||||||||||||| Sbjct: 197 gcggcggctgcggctgcggcggcggc 172
>ref|NM_134353.2| Rattus norvegicus poly(A) binding protein, cytoplasmic 1 (Pabpc1), mRNA Length = 2824 Score = 44.1 bits (22), Expect = 0.56 Identities = 70/86 (81%) Strand = Plus / Plus Query: 315 atatttattaagaatcttgacaagtcaattgacaacaaagctttgcatgacacattttgt 374 ||||| ||||| ||| | ||||| || |||||||| ||||| || |||| || |||| | Sbjct: 744 atattcattaaaaatttggacaaatccattgacaataaagcactgtatgatacgttttct 803 Query: 375 gtgtttggaaacattctttcatgtaa 400 | |||||| ||||| ||||||||||| Sbjct: 804 gcgtttggtaacatcctttcatgtaa 829
>dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1793G04 Length = 156714 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcgt 30 |||||||||||||||||||||| Sbjct: 145245 gctgcggctgcggcggcggcgt 145266
>gb|AC087096.11| Oryza sativa chromosome 3 BAC OSJNBa0087O09 genomic sequence, complete sequence Length = 119134 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcgg 27 |||||| ||||||||||||||||||| Sbjct: 24553 ggcggcggctgcggctgcggcggcgg 24578
>dbj|AP003373.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1116_H09 Length = 110086 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 gctgcggcggcggcgtcgtcgt 36 |||||||||||||||||||||| Sbjct: 4546 gctgcggcggcggcgtcgtcgt 4525
>dbj|AP005755.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0019B14 Length = 127570 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 6 gccgctgcggctgcggcggcggcgtcgtcg 35 ||||| |||||||||||||||||| ||||| Sbjct: 67019 gccgccgcggctgcggcggcggcggcgtcg 66990
>dbj|AP005105.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0052O11 Length = 106467 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 18 gcggcggcggcgtcgtcgttcccggc 43 |||||||||||||||||||| ||||| Sbjct: 55100 gcggcggcggcgtcgtcgttgccggc 55075
>dbj|AP004573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0678G09 Length = 139220 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 18 gcggcggcggcgtcgtcgttcccggc 43 |||||||||||||||||||| ||||| Sbjct: 21389 gcggcggcggcgtcgtcgttgccggc 21364
>dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1297_C09 Length = 163378 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 gctgcggcggcggcgtcgtcgt 36 |||||||||||||||||||||| Sbjct: 94328 gctgcggcggcggcgtcgtcgt 94349
>dbj|AK130523.1| Homo sapiens cDNA FLJ27013 fis, clone SLV05396, highly similar to Polyadenylate-binding protein 1 Length = 2621 Score = 44.1 bits (22), Expect = 0.56 Identities = 70/86 (81%) Strand = Plus / Plus Query: 315 atatttattaagaatcttgacaagtcaattgacaacaaagctttgcatgacacattttgt 374 ||||| ||||| ||||| ||||| || ||||| || ||||| || |||| ||||||| | Sbjct: 805 atattcattaaaaatctggacaaatccattgataataaagcactgtatgatacattttct 864 Query: 375 gtgtttggaaacattctttcatgtaa 400 | ||||| ||||| ||||||||||| Sbjct: 865 gcttttggtaacatcctttcatgtaa 890
>dbj|AK110737.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-F04, full insert sequence Length = 1577 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 9 gctgcggctgcggcggcggcgt 30 |||||||||||||||||||||| Sbjct: 804 gctgcggctgcggcggcggcgt 783
>dbj|AK110440.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-D03, full insert sequence Length = 3512 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 5 ggccgctgcggctgcggcggcg 26 |||||||||||||||||||||| Sbjct: 2712 ggccgctgcggctgcggcggcg 2733
>dbj|AK101580.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050N17, full insert sequence Length = 1298 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcgg 27 |||||| ||||||||||||||||||| Sbjct: 41 ggcggcggctgcggctgcggcggcgg 16
>dbj|AK071512.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023098N15, full insert sequence Length = 1499 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 18 gcggcggcggcgtcgtcgttcccggc 43 |||||||||||||||||||| ||||| Sbjct: 1063 gcggcggcggcgtcgtcgttgccggc 1088
>dbj|AK070548.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055G11, full insert sequence Length = 1345 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcgg 27 |||||| ||||||||||||||||||| Sbjct: 37 ggcggcggctgcggctgcggcggcgg 12
>ref|NM_208809.1| Eremothecium gossypii ACR053Wp (ACR053W), mRNA Length = 1173 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 12 gcggctgcggcggcggcgtcgt 33 |||||||||||||||||||||| Sbjct: 421 gcggctgcggcggcggcgtcgt 442
>dbj|AK060708.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H09, full insert sequence Length = 1603 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 6 gccgctgcggctgcggcggcggcgtcgtcg 35 ||||| |||||||||||||||||| ||||| Sbjct: 504 gccgccgcggctgcggcggcggcggcgtcg 475
>gb|AE003764.3| Drosophila melanogaster chromosome 3R, section 102 of 118 of the complete sequence Length = 231455 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 424 aatcaaagggctatggctttgt 445 |||||||||||||||||||||| Sbjct: 128186 aatcaaagggctatggctttgt 128207
>gb|U68094.1|HSPABPS02 Human poly(A)-binding protein (PABP) gene, exon 2 Length = 399 Score = 44.1 bits (22), Expect = 0.56 Identities = 70/86 (81%) Strand = Plus / Plus Query: 315 atatttattaagaatcttgacaagtcaattgacaacaaagctttgcatgacacattttgt 374 ||||| ||||| ||||| ||||| || ||||| || ||||| || |||| ||||||| | Sbjct: 225 atattcattaaaaatctggacaaatccattgataataaagcactgtatgatacattttct 284 Query: 375 gtgtttggaaacattctttcatgtaa 400 | ||||| ||||| ||||||||||| Sbjct: 285 gcttttggtaacatcctttcatgtaa 310
>emb|AJ535065.1|OSA535065 Oryza sativa (japonica cultivar-group) mdr7 gene for MDR-like ABC transporter, exons 1-12 Length = 6668 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 gctgcggcggcggcgtcgtcgt 36 |||||||||||||||||||||| Sbjct: 55 gctgcggcggcggcgtcgtcgt 76
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 gcggccgctgcggctgcggcggcggc 28 ||||| |||||||||||||||||||| Sbjct: 1903249 gcggctgctgcggctgcggcggcggc 1903274
>ref|NM_207177.1| Gallus gallus homeobox D8 (HOXD8), mRNA Length = 1263 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcgg 27 |||||| ||||||||||||||||||| Sbjct: 207 ggcggcggctgcggctgcggcggcgg 232
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcgg 27 |||||| ||||||||||||||||||| Sbjct: 19633877 ggcggcggctgcggctgcggcggcgg 19633852 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 22356358 gctgcggctgcggcggcggcg 22356338 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 2557121 gctgcggctgcggcggcggcg 2557101 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 cgctgcggctgcggcggcggc 28 ||||||||||||||||||||| Sbjct: 2527365 cgctgcggctgcggcggcggc 2527385 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 1986335 gctgcggctgcggcggcggcg 1986355 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 6 gccgctgcggctgcggcggcggcg 29 ||||||||||| |||||||||||| Sbjct: 24666588 gccgctgcggcggcggcggcggcg 24666565 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcggcg 29 |||||| |||||||||||||| |||||| Sbjct: 22356371 ggcggcggctgcggctgcggctgcggcg 22356344 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcggcg 29 |||||| ||||||||||| ||||||||| Sbjct: 16528956 ggcggcggctgcggctgctgcggcggcg 16528983 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 ctgcggctgcggcggcggcgtcgt 33 ||||||| |||||||||||||||| Sbjct: 2543289 ctgcggcggcggcggcggcgtcgt 2543312 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctgcggctgcggcggcggcg 29 |||||||||||||||||||| Sbjct: 1374430 ctgcggctgcggcggcggcg 1374449
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcgg 27 |||||| ||||||||||||||||||| Sbjct: 1721277 ggcggcggctgcggctgcggcggcgg 1721302 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 4 cggccgctgcggctgcggcggcggcg 29 |||| ||||||||||||||||||||| Sbjct: 1721213 cggcggctgcggctgcggcggcggcg 1721238 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 19110498 gctgcggctgcggcggcggcg 19110518 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 3862813 gctgcggctgcggcggcggcg 3862833 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 tgcggctgcggcggcggcgt 30 |||||||||||||||||||| Sbjct: 4463140 tgcggctgcggcggcggcgt 4463159 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggc 28 |||||||||||||||||||| Sbjct: 3301674 gctgcggctgcggcggcggc 3301693
>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132026 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 4 cggccgctgcggctgcggcggcggcg 29 |||| ||||||||||||||||||||| Sbjct: 119247 cggcggctgcggctgcggcggcggcg 119222 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcgg 27 |||||| ||||||||||||||||||| Sbjct: 119183 ggcggcggctgcggctgcggcggcgg 119158
>emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239_F07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104307 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 4 cggccgctgcggctgcggcggcggcg 29 |||| ||||||||||||||||||||| Sbjct: 45684 cggcggctgcggctgcggcggcggcg 45659 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcgg 27 |||||| ||||||||||||||||||| Sbjct: 45620 ggcggcggctgcggctgcggcggcgg 45595
>gb|BC023217.1| Homo sapiens cDNA clone IMAGE:4522410 Length = 2515 Score = 44.1 bits (22), Expect = 0.56 Identities = 70/86 (81%) Strand = Plus / Plus Query: 315 atatttattaagaatcttgacaagtcaattgacaacaaagctttgcatgacacattttgt 374 ||||| ||||| ||||| ||||| || ||||| || ||||| || |||| ||||||| | Sbjct: 784 atattcattaaaaatctggacaaatccattgataataaagcactgtatgatacattttct 843 Query: 375 gtgtttggaaacattctttcatgtaa 400 | ||||| ||||| ||||||||||| Sbjct: 844 gcttttggtaacatcctttcatgtaa 869
>gb|BC023520.2| Homo sapiens poly(A) binding protein, cytoplasmic 1, mRNA (cDNA clone MGC:12727 IMAGE:4123269), complete cds Length = 2554 Score = 44.1 bits (22), Expect = 0.56 Identities = 70/86 (81%) Strand = Plus / Plus Query: 315 atatttattaagaatcttgacaagtcaattgacaacaaagctttgcatgacacattttgt 374 ||||| ||||| ||||| ||||| || ||||| || ||||| || |||| ||||||| | Sbjct: 784 atattcattaaaaatctggacaaatccattgataataaagcactgtatgatacattttct 843 Query: 375 gtgtttggaaacattctttcatgtaa 400 | ||||| ||||| ||||||||||| Sbjct: 844 gcttttggtaacatcctttcatgtaa 869
>emb|Z48501.1|HSPABPII H.sapiens mRNA for polyadenylate binding protein II Length = 1569 Score = 44.1 bits (22), Expect = 0.56 Identities = 70/86 (81%) Strand = Plus / Plus Query: 315 atatttattaagaatcttgacaagtcaattgacaacaaagctttgcatgacacattttgt 374 ||||| ||||| ||||| ||||| || ||||| || ||||| || |||| ||||||| | Sbjct: 226 atattcattaaaaatctggacaaatccattgataataaagcactgtatgatacattttct 285 Query: 375 gtgtttggaaacattctttcatgtaa 400 | ||||| ||||| ||||||||||| Sbjct: 286 gcttttggtaacatcctttcatgtaa 311
>emb|Y00345.1|HSPOLYAB Human mRNA for polyA binding protein Length = 2848 Score = 44.1 bits (22), Expect = 0.56 Identities = 70/86 (81%) Strand = Plus / Plus Query: 315 atatttattaagaatcttgacaagtcaattgacaacaaagctttgcatgacacattttgt 374 ||||| ||||| ||||| ||||| || ||||| || ||||| || |||| ||||||| | Sbjct: 803 atattcattaaaaatctggacaaatccattgataataaagcactgtatgatacattttct 862 Query: 375 gtgtttggaaacattctttcatgtaa 400 | ||||| ||||| ||||||||||| Sbjct: 863 gcttttggtaacatcctttcatgtaa 888
>dbj|AP004195.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1434A12 Length = 151834 Score = 44.1 bits (22), Expect = 0.56 Identities = 70/86 (81%) Strand = Plus / Minus Query: 315 atatttattaagaatcttgacaagtcaattgacaacaaagctttgcatgacacattttgt 374 ||||| ||||| ||||| ||||| || ||||| || ||||| || |||| ||||||| | Sbjct: 13921 atattcattaaaaatctggacaaatccattgataataaagcactgtatgatacattttct 13862 Query: 375 gtgtttggaaacattctttcatgtaa 400 | ||||| ||||| ||||||||||| Sbjct: 13861 gcttttggtaacatcctttcatgtaa 13836
>dbj|AP001205.3| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1083B1, complete sequence Length = 155731 Score = 44.1 bits (22), Expect = 0.56 Identities = 70/86 (81%) Strand = Plus / Minus Query: 315 atatttattaagaatcttgacaagtcaattgacaacaaagctttgcatgacacattttgt 374 ||||| ||||| ||||| ||||| || ||||| || ||||| || |||| ||||||| | Sbjct: 126655 atattcattaaaaatctggacaaatccattgataataaagcactgtatgatacattttct 126596 Query: 375 gtgtttggaaacattctttcatgtaa 400 | ||||| ||||| ||||||||||| Sbjct: 126595 gcttttggtaacatcctttcatgtaa 126570
>ref|NM_127899.2| Arabidopsis thaliana PAB4; RNA binding / translation initiation factor AT2G23350 (PAB4) mRNA, complete cds Length = 2371 Score = 42.1 bits (21), Expect = 2.2 Identities = 66/81 (81%) Strand = Plus / Plus Query: 476 tgctattgagaaactcaatgggatgcttatgaatgacaagaaggtttatgttgggccttt 535 |||||||||||| || ||||||| | |||||||||| || ||| |||||| ||||| Sbjct: 723 tgctattgagaagctgaatgggaaagtgttgaatgacaaacagatttttgttggaccttt 782 Query: 536 tgttcgtaagcaggagagaga 556 | |||||||| |||| ||||| Sbjct: 783 tcttcgtaaggaggaaagaga 803
>gb|AC163610.4| Mus musculus BAC clone RP23-59P17 from chromosome 13, complete sequence Length = 237111 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcggcgtcgtc 34 |||||| || ||||| ||||||||||||||||| Sbjct: 125851 ggcggcggcggcggcggcggcggcggcgtcgtc 125819
>ref|NM_187849.1| Oryza sativa (japonica cultivar-group), Ozsa8293 predicted mRNA Length = 1209 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 71 gctgcggctgcggcggcggcg 91
>ref|XM_514955.1| PREDICTED: Pan troglodytes similar to ATP-binding cassette, sub-family G, member 1 (White protein homolog) (ATP-binding cassette transporter 8) (LOC458623), mRNA Length = 764 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1 gggcggccgctgcggctgcggcggcggcg 29 ||||||| || |||||||||||||||||| Sbjct: 154 gggcggctgcggcggctgcggcggcggcg 126
>ref|XM_475511.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1257 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 463 gctgcggctgcggcggcggcg 443
>ref|XM_507570.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0056O06.23 mRNA Length = 1890 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 ggccgctgcggctgcggcggcggcg 29 |||||||||||| |||||||||||| Sbjct: 294 ggccgctgcggcggcggcggcggcg 270
>ref|XM_480491.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1848 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 ggccgctgcggctgcggcggcggcg 29 |||||||||||| |||||||||||| Sbjct: 295 ggccgctgcggcggcggcggcggcg 271
>ref|XM_507156.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0056O06.23 mRNA Length = 1914 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 ggccgctgcggctgcggcggcggcg 29 |||||||||||| |||||||||||| Sbjct: 298 ggccgctgcggcggcggcggcggcg 274
>ref|XM_480373.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3844 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 116 gctgcggctgcggcggcggcg 96
>ref|XM_521895.1| PREDICTED: Pan troglodytes similar to Homeobox protein aristaless-like 4 (LOC466496), mRNA Length = 5334 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 2917 gctgcggctgcggcggcggcg 2897
>ref|NM_194613.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0023I19.11), mRNA Length = 1788 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 52 gctgcggctgcggcggcggcg 32
>ref|NM_197768.1| Oryza sativa (japonica cultivar-group) putative peptide methionine sulfoxide reductase (OSJNBa0027P10.3), mRNA Length = 1165 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcg 26 |||||| |||||||||||||||||| Sbjct: 160 ggcggcggctgcggctgcggcggcg 184
>ref|NM_197590.1| Oryza sativa (japonica cultivar-group) putative ubiquitin protein (OSJNBb0015I11.23), mRNA Length = 2359 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 176 gctgcggctgcggcggcggcg 196
>ref|NM_197435.1| Oryza sativa (japonica cultivar-group) putative phospholipase (OSJNBa0096G08.23), mRNA Length = 3512 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 187 gctgcggctgcggcggcggcg 167
>gb|BT017079.1| Zea mays clone EL01N0360A10.c mRNA sequence Length = 763 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 67 gctgcggctgcggcggcggcg 47
>ref|XM_513453.1| PREDICTED: Pan troglodytes similar to forkhead box D3 (LOC456905), mRNA Length = 1752 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcg 26 ||||||||| ||||||||||||||| Sbjct: 801 ggcggccgcggcggctgcggcggcg 825
>gb|AC119834.12| Mus musculus chromosome 5, clone RP24-383P24, complete sequence Length = 223764 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 3 gcggccgctgcggctgcggcggcgg 27 ||||| ||||||||||||||||||| Sbjct: 200621 gcggcggctgcggctgcggcggcgg 200597
>gb|AF124045.1| Sorghum bicolor BAC clone 110K5, partial sequence Length = 78195 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 14321 gctgcggctgcggcggcggcg 14341
>gb|AC107085.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1764_D01, complete sequence Length = 164709 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 34152 gctgcggctgcggcggcggcg 34172
>gb|AC093088.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1001_G01, complete sequence Length = 122768 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 54453 gctgcggctgcggcggcggcg 54473
>gb|AC162284.11| Mus musculus chromosome 8, clone RP23-256C11, complete sequence Length = 162981 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 2681 gctgcggctgcggcggcggcg 2701
>gb|AF064841.1| Homo sapiens map 13p13; 44cR from WI-8572 repeat region, complete sequence Length = 863 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcggcgtcgtc 34 |||||| || ||||| ||||||||||||||||| Sbjct: 25 ggcggcggcggcggcggcggcggcggcgtcgtc 57
>gb|AC078894.11| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0096G08 map E1363S, complete sequence Length = 140681 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 127389 gctgcggctgcggcggcggcg 127409
>gb|AC145780.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0069P02 map near S13580, complete sequence Length = 88044 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 25205 gctgcggctgcggcggcggcg 25225
>gb|AC112209.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0030I09 map C83B, complete sequence Length = 123477 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 cgctgcggctgcggcggcggc 28 ||||||||||||||||||||| Sbjct: 104070 cgctgcggctgcggcggcggc 104050 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 74314 gctgcggctgcggcggcggcg 74334 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 ctgcggctgcggcggcggcgtcgt 33 ||||||| |||||||||||||||| Sbjct: 88146 ctgcggcggcggcggcggcgtcgt 88123
>gb|AC113983.13| Mus musculus chromosome 5, clone RP24-95M11, complete sequence Length = 198590 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 gcggccgctgcggctgcggcggcgg 27 ||||| ||||||||||||||||||| Sbjct: 153958 gcggcggctgcggctgcggcggcgg 153982
>gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAa0068G15, complete sequence Length = 130161 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 117128 gctgcggctgcggcggcggcg 117148
>gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035I01, complete sequence Length = 147813 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tgcggctgcggcggcggcgtcgtcg 35 |||||| |||||||||||||||||| Sbjct: 12685 tgcggcggcggcggcggcgtcgtcg 12661
>gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B06, complete sequence Length = 139139 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 gcggctgcggcggcggcgtcgtcgt 36 |||||||||||||||||| |||||| Sbjct: 43865 gcggctgcggcggcggcggcgtcgt 43889
>gb|AY692854.1| Saccharomyces cerevisiae clone FLH112778.01X YER165W gene, complete cds Length = 1734 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 342 attgacaacaaagctttgcatgacacattttgtgtgtttgg 382 ||||||||||| |||||| ||||||| || | ||||||||| Sbjct: 409 attgacaacaaggctttgtatgacactttctctgtgtttgg 449
>gb|BC079610.1| Mus musculus paired-like homeobox 2b, mRNA (cDNA clone MGC:90726 IMAGE:30360139), complete cds Length = 2857 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 gcggccgctgcggctgcggcggcgg 27 ||||| ||||||||||||||||||| Sbjct: 942 gcggcggctgcggctgcggcggcgg 966
>ref|XM_362070.1| Magnaporthe grisea 70-15 hypothetical protein (MG04515.4) partial cds Length = 2631 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 gcggctgcggcggcggcgtcgtcgt 36 ||||||||||||||| ||||||||| Sbjct: 1955 gcggctgcggcggcgccgtcgtcgt 1979
>ref|XM_364660.1| Magnaporthe grisea 70-15 hypothetical protein (MG09505.4) partial mRNA Length = 2289 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 168 ctcggatacgcctacgtcaactacaacac 196 ||||| ||||||||||| ||||||||||| Sbjct: 304 ctcggctacgcctacgtgaactacaacac 332
>gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0028C22, complete sequence Length = 154228 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 146625 gctgcggctgcggcggcggcg 146645
>gb|AY532061.1| Oikopleura dioica DLLregion-01, integrin alpha 3, DLLregion-03, distal-less, DNA repair protein RAD51, DLLregion-07, peptidyl-prolyl cis-trans isomerase, DLLregion-09, DLLregion-10, Ras-related protein RAP1, calcium transporter 2, polyadenylate binding protein, and DLLregion-14 genes, complete cds Length = 52924 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 tcgctcggatacgcctacgtcaact 189 |||||||| |||||||||||||||| Sbjct: 49909 tcgctcggttacgcctacgtcaact 49885
>ref|XM_957707.1| Neurospora crassa OR74A hypothetical protein (NCU07625.1) partial mRNA Length = 2034 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 1750 gctgcggctgcggcggcggcg 1770
>ref|XM_955732.1| Neurospora crassa OR74A hypothetical protein (NCU01288.1) partial mRNA Length = 4929 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 4657 gctgcggctgcggcggcggcg 4677
>gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1214_E03, complete sequence Length = 144601 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 5 ggccgctgcggctgcggcggcggcg 29 ||||||||| ||||||||||||||| Sbjct: 29282 ggccgctgctgctgcggcggcggcg 29306
>ref|XM_326780.1| Neurospora crassa OR74A hypothetical protein (NCU01288.1) partial mRNA Length = 4929 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 4657 gctgcggctgcggcggcggcg 4677
>ref|XM_328330.1| Neurospora crassa OR74A hypothetical protein (NCU07625.1) partial mRNA Length = 2034 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 1750 gctgcggctgcggcggcggcg 1770
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 tcgcccagatcggcggcgtcg 126 ||||||||||||||||||||| Sbjct: 1719787 tcgcccagatcggcggcgtcg 1719767
>ref|NM_175061.3| Homo sapiens juxtaposed with another zinc finger gene 1 (JAZF1), mRNA Length = 3210 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 gcggctgcggcggcggcgtcg 32 ||||||||||||||||||||| Sbjct: 34 gcggctgcggcggcggcgtcg 14
>ref|XM_612715.2| PREDICTED: Bos taurus similar to Forkhead box protein J2 (Fork head homologous X) (LOC540703), mRNA Length = 5730 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1 gggcggccgctgcggctgcggcggc 25 ||||||| ||||||||||||||||| Sbjct: 2064 gggcggcggctgcggctgcggcggc 2040
>ref|XM_716442.1| Candida albicans SC5314 hypothetical protein (CaO19_3037), mRNA Length = 1890 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 348 aacaaagctttgcatgacacatttt 372 |||||||||||||||||||| |||| Sbjct: 457 aacaaagctttgcatgacacctttt 481
>ref|XM_716171.1| Candida albicans SC5314 hypothetical protein (CaO19_10555), mRNA Length = 1890 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 348 aacaaagctttgcatgacacatttt 372 |||||||||||||||||||| |||| Sbjct: 457 aacaaagctttgcatgacacctttt 481
>gb|AC145992.2| Pan troglodytes BAC clone RP43-172K3 from 7, complete sequence Length = 208817 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcggcgtcgtc 34 |||||| || ||||| ||||||||||||||||| Sbjct: 198790 ggcggcggcggcggcggcggcggcggcgtcgtc 198758
>ref|XM_656978.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4466.2), mRNA Length = 4581 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 ggctgcggcggcggcgtcgtc 34 ||||||||||||||||||||| Sbjct: 4080 ggctgcggcggcggcgtcgtc 4100
>ref|NM_007235.3| Homo sapiens exportin, tRNA (nuclear export receptor for tRNAs) (XPOT), mRNA Length = 3881 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcggcgt 30 |||||| |||||||| ||||||||||||| Sbjct: 20 ggcggcggctgcggcggcggcggcggcgt 48
>gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBa0059J06, complete sequence Length = 185449 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 50109 gctgcggctgcggcggcggcg 50129
>gb|AC127416.7| Mus musculus BAC clone RP23-457J22 from chromosome 8, complete sequence Length = 206997 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 131859 gctgcggctgcggcggcggcg 131879
>ref|XM_984542.1| PREDICTED: Mus musculus hypothetical protein LOC671020 (LOC671020), mRNA Length = 2150 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcggcgtcgtc 34 |||||| || ||||| ||||||||||||||||| Sbjct: 1871 ggcggcggcggcggcggcggcggcggcgtcgtc 1903
>ref|XM_979761.1| PREDICTED: Mus musculus DAZ interacting protein 1 (Dzip1), mRNA Length = 5121 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 844 gctgcggctgcggcggcggcg 824
>gb|AC124179.4| Mus musculus chromosome 12 clone RP23-198B21, complete sequence Length = 192472 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 560 ctctccaggcagtgtcaagttcaat 584 |||||| |||||||||||||||||| Sbjct: 70267 ctctcctggcagtgtcaagttcaat 70243
>ref|XM_978036.1| PREDICTED: Mus musculus hypothetical protein LOC674915 (LOC674915), mRNA Length = 2150 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcggcgtcgtc 34 |||||| || ||||| ||||||||||||||||| Sbjct: 1871 ggcggcggcggcggcggcggcggcggcgtcgtc 1903
>ref|XM_974809.1| PREDICTED: Mus musculus hypothetical protein LOC665139 (LOC665139), mRNA Length = 2150 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcggcgtcgtc 34 |||||| || ||||| ||||||||||||||||| Sbjct: 1871 ggcggcggcggcggcggcggcggcggcgtcgtc 1903
>ref|XM_980756.1| PREDICTED: Mus musculus RIKEN cDNA 1500034J01 gene (1500034J01Rik), mRNA Length = 2278 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 79 gctgcggctgcggcggcggcg 99
>ref|XM_980302.1| PREDICTED: Mus musculus RIKEN cDNA 1500034J01 gene (1500034J01Rik), mRNA Length = 2459 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 79 gctgcggctgcggcggcggcg 99
>ref|XM_912953.2| PREDICTED: Mus musculus RIKEN cDNA 1500034J01 gene (1500034J01Rik), mRNA Length = 2278 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 79 gctgcggctgcggcggcggcg 99
>ref|XM_001004471.1| PREDICTED: Mus musculus cleavage and polyadenylation specific factor 4, transcript variant 5 (Cpsf4), mRNA Length = 1734 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1 gggcggccgctgcggctgcggcggcggcg 29 ||||||| |||||||| |||||||||||| Sbjct: 11 gggcggcggctgcggcggcggcggcggcg 39
>ref|XM_542632.2| PREDICTED: Canis familiaris similar to SLIT and NTRK-like family, member 5, transcript variant 2 (LOC485513), mRNA Length = 4262 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1 gggcggccgctgcggctgcggcggcggcg 29 ||||||| |||| |||||||||||||||| Sbjct: 2466 gggcggcggctgtggctgcggcggcggcg 2438
>ref|XM_844279.1| PREDICTED: Canis familiaris similar to SLIT and NTRK-like family, member 5, transcript variant 3 (LOC485513), mRNA Length = 4421 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1 gggcggccgctgcggctgcggcggcggcg 29 ||||||| |||| |||||||||||||||| Sbjct: 2625 gggcggcggctgtggctgcggcggcggcg 2597
>emb|Z78205.1|BHT1UL Bovine herpesvirus type 1 UL22-35 genes Length = 37000 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 ggccgctgcggctgcggcggc 25 ||||||||||||||||||||| Sbjct: 6821 ggccgctgcggctgcggcggc 6841
>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome Length = 135301 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 ggccgctgcggctgcggcggc 25 ||||||||||||||||||||| Sbjct: 37621 ggccgctgcggctgcggcggc 37641 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcgg 21 |||||||||||||||||||| Sbjct: 12649 ggcggccgctgcggctgcgg 12668
>ref|XM_843953.1| PREDICTED: Canis familiaris similar to zinc finger protein 503, transcript variant 3 (LOC482855), mRNA Length = 2179 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcg 26 ||||||||| ||||||||||||||| Sbjct: 1670 ggcggccgcggcggctgcggcggcg 1646
>ref|XM_852605.1| PREDICTED: Canis familiaris similar to zinc finger protein 503, transcript variant 4 (LOC482855), mRNA Length = 2043 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcg 26 ||||||||| ||||||||||||||| Sbjct: 1534 ggcggccgcggcggctgcggcggcg 1510
>ref|XM_539970.2| PREDICTED: Canis familiaris similar to zinc finger protein 503, transcript variant 1 (LOC482855), mRNA Length = 2106 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcg 26 ||||||||| ||||||||||||||| Sbjct: 1597 ggcggccgcggcggctgcggcggcg 1573
>emb|CT009568.8| M.truncatula DNA sequence from clone MTH2-95K22 on chromosome 3, complete sequence Length = 121926 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 362 tgacacattttgtgtgtttgg 382 ||||||||||||||||||||| Sbjct: 52664 tgacacattttgtgtgtttgg 52644
>gb|AC127678.9| Mus musculus BAC clone RP24-233M12 from chromosome 18, complete sequence Length = 157430 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 5 ggccgctgcggctgcggcggcggcg 29 |||||| |||||||||||||||||| Sbjct: 81985 ggccgcggcggctgcggcggcggcg 82009
>ref|NM_008888.2| Mus musculus paired-like homeobox 2b (Phox2b), mRNA Length = 2857 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 gcggccgctgcggctgcggcggcgg 27 ||||| ||||||||||||||||||| Sbjct: 942 gcggcggctgcggctgcggcggcgg 966
>emb|CR727928.2|CNS0GOM6 Tetraodon nigroviridis full-length cDNA Length = 982 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 cgctgcggctgcggcggcggcgtcg 32 |||||| |||||||||||||||||| Sbjct: 457 cgctgctgctgcggcggcggcgtcg 481
>emb|CR723755.2|CNS0GLE9 Tetraodon nigroviridis full-length cDNA Length = 1173 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 cgctgcggctgcggcggcggcgtcg 32 |||||| |||||||||||||||||| Sbjct: 646 cgctgctgctgcggcggcggcgtcg 670
>ref|XM_720762.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05398) partial mRNA Length = 2580 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 tcatgtaaagttgcaacagat 413 ||||||||||||||||||||| Sbjct: 394 tcatgtaaagttgcaacagat 414
>ref|XM_863131.1| PREDICTED: Canis familiaris similar to zinc finger RNA binding protein, transcript variant 9 (LOC489239), mRNA Length = 4737 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggc 22 ||||||||||||||||||||| Sbjct: 150 ggcggccgctgcggctgcggc 170
>ref|XM_863127.1| PREDICTED: Canis familiaris similar to zinc finger RNA binding protein, transcript variant 8 (LOC489239), mRNA Length = 4728 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggc 22 ||||||||||||||||||||| Sbjct: 150 ggcggccgctgcggctgcggc 170
>ref|XM_863123.1| PREDICTED: Canis familiaris similar to zinc finger RNA binding protein, transcript variant 7 (LOC489239), mRNA Length = 4737 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggc 22 ||||||||||||||||||||| Sbjct: 150 ggcggccgctgcggctgcggc 170
>ref|XM_863117.1| PREDICTED: Canis familiaris similar to zinc finger RNA binding protein, transcript variant 6 (LOC489239), mRNA Length = 4725 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggc 22 ||||||||||||||||||||| Sbjct: 150 ggcggccgctgcggctgcggc 170
>ref|XM_849011.1| PREDICTED: Canis familiaris similar to zinc finger RNA binding protein, transcript variant 2 (LOC489239), mRNA Length = 4683 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggc 22 ||||||||||||||||||||| Sbjct: 150 ggcggccgctgcggctgcggc 170
>ref|XM_863105.1| PREDICTED: Canis familiaris similar to zinc finger RNA binding protein, transcript variant 4 (LOC489239), mRNA Length = 2980 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggc 22 ||||||||||||||||||||| Sbjct: 150 ggcggccgctgcggctgcggc 170
>ref|XM_546357.2| PREDICTED: Canis familiaris similar to zinc finger RNA binding protein, transcript variant 1 (LOC489239), mRNA Length = 4739 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggc 22 ||||||||||||||||||||| Sbjct: 182 ggcggccgctgcggctgcggc 202
>ref|XM_545850.2| PREDICTED: Canis familiaris similar to DNA polymerase gamma subunit 1 (Mitochondrial DNA polymerase catalytic subunit) (PolG-alpha) (LOC488732), mRNA Length = 4432 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 440 gctgcggctgcggcggcggcg 420
>emb|CR681189.2|CNS0FOK1 Tetraodon nigroviridis full-length cDNA Length = 994 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 cgctgcggctgcggcggcggcgtcg 32 |||||| |||||||||||||||||| Sbjct: 469 cgctgctgctgcggcggcggcgtcg 493
>emb|CR677399.2|CNS0FLN7 Tetraodon nigroviridis full-length cDNA Length = 858 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 cgctgcggctgcggcggcggcgtcg 32 |||||| |||||||||||||||||| Sbjct: 333 cgctgctgctgcggcggcggcgtcg 357
>ref|XM_738087.1| Plasmodium chabaudi chabaudi polyadenylate-binding protein, (PC000304.00.0) partial mRNA Length = 1887 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 tcatgtaaagttgcaacagat 413 ||||||||||||||||||||| Sbjct: 394 tcatgtaaagttgcaacagat 414
>gb|BC034701.1| Mus musculus RIKEN cDNA 1500034J01 gene, mRNA (cDNA clone MGC:27873 IMAGE:3494430), complete cds Length = 1918 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 32 gctgcggctgcggcggcggcg 52
>emb|CR673278.2|CNS0FIH0 Tetraodon nigroviridis full-length cDNA Length = 860 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 cgctgcggctgcggcggcggcgtcg 32 |||||| |||||||||||||||||| Sbjct: 334 cgctgctgctgcggcggcggcgtcg 358
>gb|AC005017.1| Homo sapiens BAC clone GS1-214N13 from 7, complete sequence Length = 137176 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 gcggctgcggcggcggcgtcg 32 ||||||||||||||||||||| Sbjct: 20117 gcggctgcggcggcggcgtcg 20137
>gb|AC136842.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0085C16, complete sequence Length = 156069 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 84443 gctgcggctgcggcggcggcg 84423 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcggcg 29 |||||| |||||||||||||| |||||| Sbjct: 84456 ggcggcggctgcggctgcggctgcggcg 84429
>gb|AC160547.6| Mus musculus chromosome 8, clone RP23-240F23, complete sequence Length = 170722 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 102268 gctgcggctgcggcggcggcg 102288
>gb|AC142324.1| Pan troglodytes BAC clone RP43-73K6 from 7, complete sequence Length = 178050 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 2 ggcggccgctgcggctgcggcggcggcgtcgtc 34 |||||| || ||||| ||||||||||||||||| Sbjct: 150743 ggcggcggcggcggcggcggcggcggcgtcgtc 150775
>gb|AC151275.3| Mus musculus BAC clone RP24-201F8 from chromosome 17, complete sequence Length = 190772 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 23455 gctgcggctgcggcggcggcg 23435
>gb|AC149304.11| Medicago truncatula clone mth2-76g4, complete sequence Length = 114831 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 362 tgacacattttgtgtgtttgg 382 ||||||||||||||||||||| Sbjct: 34050 tgacacattttgtgtgtttgg 34070
>ref|NM_009194.1| Mus musculus solute carrier family 12, member 2 (Slc12a2), mRNA Length = 6504 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 5 ggccgctgcggctgcggcggcggcg 29 |||||| |||||||||||||||||| Sbjct: 396 ggccgcggcggctgcggcggcggcg 420
>emb|AL133375.25| Human DNA sequence from clone RP3-330M21 on chromosome 6 Contains the 3' end of the SRF gene for serum response factor (c-fos serum response element-binding transcription factor), a gene for a novel protein (KIAA0076 KIAA0708), the gene for a putative c-Myc-responsive protein (RCL), the gene for KIAA1855 protein and CpG islands, complete sequence Length = 117071 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 65976 gctgcggctgcggcggcggcg 65956
>ref|XM_968169.1| PREDICTED: Tribolium castaneum similar to CG33257-PA (LOC662046), mRNA Length = 933 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcggcgt 30 |||||||||||| || ||||||||||||| Sbjct: 717 ggcggccgctgccgcggcggcggcggcgt 689
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 1068404 gctgcggctgcggcggcggcg 1068424
>emb|Z26042.1|HAPABP A.phyllitidis PABP mRNA for poly(A)-binding protein Length = 2409 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 264 ataatgtattctaaccgtgaccccagcttgcgcaagagtgg 304 |||||||||||| ||||||| || ||| | ||||||||||| Sbjct: 585 ataatgtattctcaccgtgatcctagcattcgcaagagtgg 625
>emb|Y14493.1|MMPHOX2B Mus musculus mRNA for PHOX2b protein Length = 1604 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 gcggccgctgcggctgcggcggcgg 27 ||||| ||||||||||||||||||| Sbjct: 975 gcggcggctgcggctgcggcggcgg 999
>gb|AY079389.1| Arabidopsis thaliana putative poly(A) binding protein (At2g23350) mRNA, complete cds Length = 2020 Score = 42.1 bits (21), Expect = 2.2 Identities = 66/81 (81%) Strand = Plus / Plus Query: 476 tgctattgagaaactcaatgggatgcttatgaatgacaagaaggtttatgttgggccttt 535 |||||||||||| || ||||||| | |||||||||| || ||| |||||| ||||| Sbjct: 567 tgctattgagaagctgaatgggaaagtgttgaatgacaaacagatttttgttggaccttt 626 Query: 536 tgttcgtaagcaggagagaga 556 | |||||||| |||| ||||| Sbjct: 627 tcttcgtaaggaggaaagaga 647
>gb|AY050859.1| Arabidopsis thaliana putative poly(A) binding protein (At2g23350) mRNA, complete cds Length = 2337 Score = 42.1 bits (21), Expect = 2.2 Identities = 66/81 (81%) Strand = Plus / Plus Query: 476 tgctattgagaaactcaatgggatgcttatgaatgacaagaaggtttatgttgggccttt 535 |||||||||||| || ||||||| | |||||||||| || ||| |||||| ||||| Sbjct: 721 tgctattgagaagctgaatgggaaagtgttgaatgacaaacagatttttgttggaccttt 780 Query: 536 tgttcgtaagcaggagagaga 556 | |||||||| |||| ||||| Sbjct: 781 tcttcgtaaggaggaaagaga 801
>gb|AF360217.1| Arabidopsis thaliana putative poly(A) binding protein (At2g23350) mRNA, complete cds Length = 2385 Score = 42.1 bits (21), Expect = 2.2 Identities = 66/81 (81%) Strand = Plus / Plus Query: 476 tgctattgagaaactcaatgggatgcttatgaatgacaagaaggtttatgttgggccttt 535 |||||||||||| || ||||||| | |||||||||| || ||| |||||| ||||| Sbjct: 720 tgctattgagaagctgaatgggaaagtgttgaatgacaaacagatttttgttggaccttt 779 Query: 536 tgttcgtaagcaggagagaga 556 | |||||||| |||| ||||| Sbjct: 780 tcttcgtaaggaggaaagaga 800
>emb|BX294016.1|NCB9K17 Neurospora crassa DNA linkage group V BAC clone B9K17 Length = 71774 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 24609 gctgcggctgcggcggcggcg 24629
>gb|BC098211.1| Mus musculus DAZ interacting protein 1, mRNA (cDNA clone MGC:106777 IMAGE:6825425), complete cds Length = 4097 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 470 gctgcggctgcggcggcggcg 450
>emb|AL731623.3|OSJN00263 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083D01, complete sequence Length = 148353 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcg 26 |||||| |||||||||||||||||| Sbjct: 130378 ggcggcggctgcggctgcggcggcg 130354
>emb|AL607000.3|OSJN00132 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089B03, complete sequence Length = 130910 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2 ggcggccgctgcggctgcggcggcg 26 |||||| |||||||||||||||||| Sbjct: 17617 ggcggcggctgcggctgcggcggcg 17593
>emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K01, complete sequence Length = 163448 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 17948 gctgcggctgcggcggcggcg 17968
>gb|AC118669.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0011G21, from chromosome 3, complete sequence Length = 142401 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 124358 gctgcggctgcggcggcggcg 124338
>gb|AC165445.1| Mus musculus BAC clone RP23-10J16 from chromosome 17, complete sequence Length = 209118 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 159685 gctgcggctgcggcggcggcg 159665
>gb|AC016044.11| Homo sapiens chromosome 15 clone RP11-209K10 map 15q21.3, complete sequence Length = 168125 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 ggccgctgcggctgcggcggcggcg 29 |||||||||||| |||||||||||| Sbjct: 64528 ggccgctgcggcggcggcggcggcg 64504
>ref|NM_025943.2| Mus musculus DAZ interacting protein 1 (Dzip1), mRNA Length = 4476 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gctgcggctgcggcggcggcg 29 ||||||||||||||||||||| Sbjct: 129 gctgcggctgcggcggcggcg 109 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,088,876 Number of Sequences: 3902068 Number of extensions: 6088876 Number of successful extensions: 203613 Number of sequences better than 10.0: 781 Number of HSP's better than 10.0 without gapping: 825 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 186097 Number of HSP's gapped (non-prelim): 16525 length of query: 644 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 621 effective length of database: 17,143,297,704 effective search space: 10645987874184 effective search space used: 10645987874184 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
