ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags28n19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_189370.1| Oryza sativa (japonica cultivar-group), predic... 198 5e-48
2dbj|AK073846.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 8e-47
3dbj|AK102190.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 1e-39
4gb|BT016501.1| Zea mays clone Contig334 mRNA sequence 167 2e-38
5ref|XM_472497.1| Oryza sativa (japonica cultivar-group), predic... 163 3e-37
6dbj|AB054123.1| Oryza sativa (japonica cultivar-group) mRNA for ... 163 3e-37
7gb|BT019280.1| Zea mays clone Contig953.F mRNA sequence 159 4e-36
8gb|AY103548.1| Zea mays PCO091529 mRNA sequence 159 4e-36
9ref|XM_466144.1| Oryza sativa (japonica cultivar-group), mRNA 149 4e-33
10dbj|AK066564.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 4e-33
11emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clon... 109 3e-21
12dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 109 3e-21
13dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 105 5e-20
14dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic D... 105 5e-20
15dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 86 5e-14
16dbj|AP004775.3| Oryza sativa (japonica cultivar-group) genomic D... 86 5e-14
17dbj|AP005469.3| Oryza sativa (japonica cultivar-group) genomic D... 86 5e-14
18gb|DQ252521.1| Solanum tuberosum clone 111F10 40S ribosomal prot... 76 5e-11
19gb|DQ268860.1| Solanum tuberosum clone 178H07 40S ribosomal prot... 52 7e-04
20gb|DQ252484.1| Solanum tuberosum clone 048B07 40S ribosomal prot... 52 7e-04
21ref|XM_466203.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.043
22dbj|AP004017.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.043
23gb|AY961467.1| Phytophthora infestans clone MY-06-E-07 ribosomal... 46 0.043
24ref|NM_123516.2| Arabidopsis thaliana structural constituent of ... 44 0.17
25gb|AF375440.1| Arabidopsis thaliana AT5g41520/MBK23_4 mRNA, comp... 44 0.17
26gb|AY060539.1| Arabidopsis thaliana AT5g41520/MBK23_4 mRNA, comp... 44 0.17
27gb|AY037240.1| Arabidopsis thaliana AT5g41520/MBK23_4 mRNA, comp... 44 0.17
28dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.17
29emb|BX830030.1|CNS0A1DV Arabidopsis thaliana Full-length cDNA Co... 44 0.17
30emb|BX832280.1|CNS0A13B Arabidopsis thaliana Full-length cDNA Co... 44 0.17
31dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.17
32dbj|AP006751.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.17
33dbj|AB005233.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 44 0.17
34dbj|AK111058.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.17
35dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.17
36ref|NM_118706.2| Arabidopsis thaliana structural constituent of ... 42 0.68
37ref|NM_001036641.1| Arabidopsis thaliana structural constituent ... 42 0.68
38ref|XM_473720.1| Oryza sativa (japonica cultivar-group), predic... 42 0.68
39gb|AY113926.1| Arabidopsis thaliana putative ribosomal protein S... 42 0.68
40gb|AY035172.1| Arabidopsis thaliana putative ribosomal protein S... 42 0.68
41emb|AL161563.2|ATCHRIV63 Arabidopsis thaliana DNA chromosome 4, ... 42 0.68
42emb|AL050400.1|ATL73G19 Arabidopsis thaliana DNA chromosome 4, c... 42 0.68
43emb|AL049480.1|ATF14M19 Arabidopsis thaliana DNA chromosome 4, B... 42 0.68
44gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome 42 0.68
45dbj|AP003293.5| Oryza sativa (japonica cultivar-group) genomic D... 42 0.68
46emb|AL662981.3|OSJN00182 Oryza sativa genomic DNA, chromosome 4,... 42 0.68
47gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 2.7
48ref|XM_475510.1| Oryza sativa (japonica cultivar-group), predic... 40 2.7
49ref|XM_466124.1| Oryza sativa (japonica cultivar-group), mRNA 40 2.7
50ref|NM_196394.1| Oryza sativa (japonica cultivar-group) putative... 40 2.7
51ref|XM_469541.1| Oryza sativa (japonica cultivar-group), mRNA 40 2.7
52ref|XM_469540.1| Oryza sativa (japonica cultivar-group), mRNA 40 2.7
53ref|XM_473082.1| Oryza sativa (japonica cultivar-group), predic... 40 2.7
54gb|AC093088.4| Oryza sativa (japonica cultivar-group) chromosome... 40 2.7
55gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 2.7
56ref|XM_541830.2| PREDICTED: Canis familiaris similar to 2-phosph... 40 2.7
57ref|XM_571499.1| Cryptococcus neoformans var. neoformans JEC21 4... 40 2.7
58gb|AC090681.13| Homo sapiens 12 BAC RP11-369C14 (Roswell Park Ca... 40 2.7
59emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4,... 40 2.7
60gb|AC083943.8| Genomic sequence for Oryza sativa, Nipponbare str... 40 2.7
61gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 2.7
62dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.7
63dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.7
64dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.7
65dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.7
66gb|AC090882.10| Oryza sativa chromosome 3 BAC OSJNBa0014G15 geno... 40 2.7
67dbj|AP006465.4| Oryza sativa (japonica cultivar-group) genomic D... 40 2.7
68dbj|AP005611.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.7
69ref|NM_211444.1| Eremothecium gossypii AGL285Cp (AGL285C), mRNA 40 2.7
70gb|AY450930.1| Chlamydomonas reinhardtii plus agglutinin (SAG1) ... 40 2.7
71gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 2.7
72emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 2.7 
>ref|NM_189370.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 540

 Score =  198 bits (100), Expect = 5e-48
 Identities = 139/152 (91%)
 Strand = Plus / Plus

                                                                       
Query: 58  atgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggagggagtc 117
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1   atgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccatgagggagtc 60

                                                                       
Query: 118 ttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcgaacctc 177
           ||||| ||||||||||||||||||||||||||||||||  |||| ||||   | ||| | 
Sbjct: 61  ttgtatgccaagaaggactacaacctggccaagcacccaaaggttgatgtgcccaacttg 120

                                           
Query: 178 gaggtcatcaagctcatgcagagcttcaagtc 209
           ||||| || |||||||||||||||||||||||
Sbjct: 121 gaggtgattaagctcatgcagagcttcaagtc 152
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>dbj|AK073846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070I05, full
           insert sequence
          Length = 900

 Score =  194 bits (98), Expect = 8e-47
 Identities = 140/154 (90%)
 Strand = Plus / Plus

                                                                       
Query: 56  ccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggagggag 115
           |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 87  ccatgatcatctgcaagaagaaccgccgcgagatctgcaagtacctcttccatgagggag 146

                                                                       
Query: 116 tcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcgaacc 175
           ||||||| ||||||||||||||||||||||||||||||||  |||| ||||   | ||| 
Sbjct: 147 tcttgtatgccaagaaggactacaacctggccaagcacccaaaggttgatgtgcccaact 206

                                             
Query: 176 tcgaggtcatcaagctcatgcagagcttcaagtc 209
           | ||||| || |||||||||||||||||||||||
Sbjct: 207 tggaggtgattaagctcatgcagagcttcaagtc 240
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>dbj|AK102190.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087A06, full
           insert sequence
          Length = 902

 Score =  170 bits (86), Expect = 1e-39
 Identities = 140/158 (88%)
 Strand = Plus / Plus

                                                                       
Query: 54  cgccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggaggg 113
           ||||||||||||| | ||||||||||||   ||||||||||||||||||||||| |||||
Sbjct: 90  cgccatgatcatcccgaagaagaaccgcaatgagatctgcaagtacctcttccaagaggg 149

                                                                       
Query: 114 agtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcgaa 173
           |||  |||| ||||||||||||||||||||||| |||||||| ||| ||||||   ||||
Sbjct: 150 agtgctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgtgccgaa 209

                                                 
Query: 174 cctcgaggtcatcaagctcatgcagagcttcaagtcca 211
           |||  |||| ||||||||||||||||||||||||||||
Sbjct: 210 cctgcaggtgatcaagctcatgcagagcttcaagtcca 247
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>gb|BT016501.1| Zea mays clone Contig334 mRNA sequence
          Length = 841

 Score =  167 bits (84), Expect = 2e-38
 Identities = 138/156 (88%)
 Strand = Plus / Plus

                                                                       
Query: 56  ccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggagggag 115
           |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |
Sbjct: 62  ccatgatcatctccaagaagaaccgccgcgagatctgcaagtacatcttccatgaggggg 121

                                                                       
Query: 116 tcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcgaacc 175
           |  | || ||||||||||||||||||||||||||||||||| || | || |   | ||||
Sbjct: 122 ttctatatgccaagaaggactacaacctggccaagcaccccaagcttgacgtgcccaacc 181

                                               
Query: 176 tcgaggtcatcaagctcatgcagagcttcaagtcca 211
           | ||||| || |||||||||||||||||||||||||
Sbjct: 182 tggaggtgattaagctcatgcagagcttcaagtcca 217
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>ref|XM_472497.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 552

 Score =  163 bits (82), Expect = 3e-37
 Identities = 136/154 (88%)
 Strand = Plus / Plus

                                                                       
Query: 58  atgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggagggagtc 117
           ||||||||| | ||||||||||||   ||||||||||||||||||||||| |||||||| 
Sbjct: 1   atgatcatcccgaagaagaaccgcaatgagatctgcaagtacctcttccaagagggagtg 60

                                                                       
Query: 118 ttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcgaacctc 177
            |||| ||||||||||||||||||||||| |||||||| ||| ||||||   ||||||| 
Sbjct: 61  ctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgtgccgaacctg 120

                                             
Query: 178 gaggtcatcaagctcatgcagagcttcaagtcca 211
            |||| ||||||||||||||||||||||||||||
Sbjct: 121 caggtgatcaagctcatgcagagcttcaagtcca 154
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>dbj|AB054123.1| Oryza sativa (japonica cultivar-group) mRNA for ribosomal protein
           S10, complete cds
          Length = 756

 Score =  163 bits (82), Expect = 3e-37
 Identities = 139/158 (87%)
 Strand = Plus / Plus

                                                                       
Query: 54  cgccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggaggg 113
           ||||||||||||| | ||||||||||||   ||||||||||||||||||||||| |||||
Sbjct: 88  cgccatgatcatcccgaagaagaaccgcaatgagatctgcaagtacctcttccaagaggg 147

                                                                       
Query: 114 agtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcgaa 173
           |||  |||| ||||||||||||||||||||||| |||||||| ||| ||||||   ||||
Sbjct: 148 agtgctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgtgccgaa 207

                                                 
Query: 174 cctcgaggtcatcaagctcatgcagagcttcaagtcca 211
           |||  |||| |||||| |||||||||||||||||||||
Sbjct: 208 cctgcaggtgatcaagttcatgcagagcttcaagtcca 245
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>gb|BT019280.1| Zea mays clone Contig953.F mRNA sequence
          Length = 872

 Score =  159 bits (80), Expect = 4e-36
 Identities = 137/156 (87%)
 Strand = Plus / Minus

                                                                       
Query: 56  ccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggagggag 115
           ||||||||||| ||||||||||||||   ||||||||||||||||||||| ||||||| |
Sbjct: 794 ccatgatcatccccaagaagaaccgcaatgagatctgcaagtacctcttcaaggagggcg 735

                                                                       
Query: 116 tcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcgaacc 175
           |  |||| ||||||||||||||||||||||| |||||||| ||| | ||||   | ||||
Sbjct: 734 tgctgtatgccaagaaggactacaacctggcgaagcacccacagattgatgtgcccaacc 675

                                               
Query: 176 tcgaggtcatcaagctcatgcagagcttcaagtcca 211
           || |||| ||||||||||||||||||||||||||||
Sbjct: 674 tccaggtgatcaagctcatgcagagcttcaagtcca 639
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>gb|AY103548.1| Zea mays PCO091529 mRNA sequence
          Length = 1541

 Score =  159 bits (80), Expect = 4e-36
 Identities = 137/156 (87%)
 Strand = Plus / Plus

                                                                       
Query: 56  ccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggagggag 115
           ||||||||||| ||||||||||||||   ||||||||||||||||||||| ||||||| |
Sbjct: 245 ccatgatcatccccaagaagaaccgcaatgagatctgcaagtacctcttcaaggagggcg 304

                                                                       
Query: 116 tcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcgaacc 175
           |  |||| ||||||||||||||||||||||| |||||||| ||| ||||||   | ||||
Sbjct: 305 tgctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgtgcccaacc 364

                                               
Query: 176 tcgaggtcatcaagctcatgcagagcttcaagtcca 211
           || |||| |||||||||||||||||||| |||||||
Sbjct: 365 tccaggtgatcaagctcatgcagagctttaagtcca 400



 Score = 97.6 bits (49), Expect = 1e-17
 Identities = 82/93 (88%)
 Strand = Plus / Plus

                                                                       
Query: 119 tgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcgaacctcg 178
           |||| ||||||||||||||||||||||| |||||||| ||| | ||||   | |||||| 
Sbjct: 21  tgtatgccaagaaggactacaacctggcgaagcacccacagattgatgtgcccaacctcc 80

                                            
Query: 179 aggtcatcaagctcatgcagagcttcaagtcca 211
           |||| ||||||||||||||||||||||||||||
Sbjct: 81  aggtgatcaagctcatgcagagcttcaagtcca 113
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>ref|XM_466144.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 853

 Score =  149 bits (75), Expect = 4e-33
 Identities = 138/159 (86%)
 Strand = Plus / Plus

                                                                       
Query: 53  tcgccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggagg 112
           |||||||||||||| |||||||||||||    ||||||||||||||||||||||| ||||
Sbjct: 76  tcgccatgatcatccccaagaagaaccggaatgagatctgcaagtacctcttccaagagg 135

                                                                       
Query: 113 gagtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcga 172
           | || |||||||||||||||||||||||  |||| || ||||| ||| | ||||   | |
Sbjct: 136 gggttttgtacgccaagaaggactacaatttggcaaaacacccacagattgatgtgccaa 195

                                                  
Query: 173 acctcgaggtcatcaagctcatgcagagcttcaagtcca 211
           ||||  |||||||||||||||||||||||||||||||||
Sbjct: 196 accttcaggtcatcaagctcatgcagagcttcaagtcca 234
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>dbj|AK066564.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073I17, full
           insert sequence
          Length = 853

 Score =  149 bits (75), Expect = 4e-33
 Identities = 138/159 (86%)
 Strand = Plus / Plus

                                                                       
Query: 53  tcgccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggagg 112
           |||||||||||||| |||||||||||||    ||||||||||||||||||||||| ||||
Sbjct: 76  tcgccatgatcatccccaagaagaaccggaatgagatctgcaagtacctcttccaagagg 135

                                                                       
Query: 113 gagtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcga 172
           | || |||||||||||||||||||||||  |||| || ||||| ||| | ||||   | |
Sbjct: 136 gggttttgtacgccaagaaggactacaatttggcaaaacacccacagattgatgtgccaa 195

                                                  
Query: 173 acctcgaggtcatcaagctcatgcagagcttcaagtcca 211
           ||||  |||||||||||||||||||||||||||||||||
Sbjct: 196 accttcaggtcatcaagctcatgcagagcttcaagtcca 234
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>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16,
              complete sequence
          Length = 163738

 Score =  109 bits (55), Expect = 3e-21
 Identities = 91/103 (88%)
 Strand = Plus / Plus

                                                                          
Query: 109    gagggagtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcc 168
              ||||||||  |||| ||||||||||||||||||||||| |||||||| ||| ||||||  
Sbjct: 152161 gagggagtgctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgtg 152220

                                                         
Query: 169    tcgaacctcgaggtcatcaagctcatgcagagcttcaagtcca 211
               |||||||  |||| ||||||||||||||||||||||||||||
Sbjct: 152221 ccgaacctgcaggtgatcaagctcatgcagagcttcaagtcca 152263



 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                              
Query: 60     gatcatctccaagaagaaccgccgcgagatctgcaagtacctcttcca 107
              ||||||| | ||||||||||||   |||||||||||||||||||||||
Sbjct: 151665 gatcatcccgaagaagaaccgcaatgagatctgcaagtacctcttcca 151712
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  109 bits (55), Expect = 3e-21
 Identities = 91/103 (88%)
 Strand = Plus / Plus

                                                                            
Query: 109      gagggagtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcc 168
                ||||||||  |||| ||||||||||||||||||||||| |||||||| ||| ||||||  
Sbjct: 21338687 gagggagtgctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgtg 21338746

                                                           
Query: 169      tcgaacctcgaggtcatcaagctcatgcagagcttcaagtcca 211
                 |||||||  |||| ||||||||||||||||||||||||||||
Sbjct: 21338747 ccgaacctgcaggtgatcaagctcatgcagagcttcaagtcca 21338789



 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                                
Query: 60       gatcatctccaagaagaaccgccgcgagatctgcaagtacctcttcca 107
                ||||||| | ||||||||||||   |||||||||||||||||||||||
Sbjct: 21338191 gatcatcccgaagaagaaccgcaatgagatctgcaagtacctcttcca 21338238



 Score = 42.1 bits (21), Expect = 0.68
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 30       cgtctccgtccccgccgcgcc 50
                |||||||||||||||||||||
Sbjct: 29851235 cgtctccgtccccgccgcgcc 29851215



 Score = 40.1 bits (20), Expect = 2.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 20       gcggcgccgccgtctccgtccccgccgc 47
                |||||||||||||||||| | |||||||
Sbjct: 25153682 gcggcgccgccgtctccgccaccgccgc 25153655
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  105 bits (53), Expect = 5e-20
 Identities = 89/101 (88%)
 Strand = Plus / Minus

                                                                            
Query: 109      gagggagtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcc 168
                |||||||||||||| ||||||||||||||||||||||||||||||||  |||| ||||  
Sbjct: 42419109 gagggagtcttgtatgccaagaaggactacaacctggccaagcacccaaaggttgatgtg 42419050

                                                         
Query: 169      tcgaacctcgaggtcatcaagctcatgcagagcttcaagtc 209
                 | ||| | ||||| || |||||||||||||||||||||||
Sbjct: 42419049 cccaacttggaggtgattaagctcatgcagagcttcaagtc 42419009



 Score = 95.6 bits (48), Expect = 5e-17
 Identities = 48/48 (100%)
 Strand = Plus / Minus

                                                                
Query: 60       gatcatctccaagaagaaccgccgcgagatctgcaagtacctcttcca 107
                ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42419508 gatcatctccaagaagaaccgccgcgagatctgcaagtacctcttcca 42419461



 Score = 42.1 bits (21), Expect = 0.68
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 19       cgcggcgccgccgtctccgtccccgccgc 47
                ||||||||||||||| ||||| |||||||
Sbjct: 33794464 cgcggcgccgccgtcgccgtcgccgccgc 33794436
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>dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0483G10
          Length = 190721

 Score =  105 bits (53), Expect = 5e-20
 Identities = 89/101 (88%)
 Strand = Plus / Minus

                                                                         
Query: 109   gagggagtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcc 168
             |||||||||||||| ||||||||||||||||||||||||||||||||  |||| ||||  
Sbjct: 78447 gagggagtcttgtatgccaagaaggactacaacctggccaagcacccaaaggttgatgtg 78388

                                                      
Query: 169   tcgaacctcgaggtcatcaagctcatgcagagcttcaagtc 209
              | ||| | ||||| || |||||||||||||||||||||||
Sbjct: 78387 cccaacttggaggtgattaagctcatgcagagcttcaagtc 78347



 Score = 95.6 bits (48), Expect = 5e-17
 Identities = 48/48 (100%)
 Strand = Plus / Minus

                                                             
Query: 60    gatcatctccaagaagaaccgccgcgagatctgcaagtacctcttcca 107
             ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78846 gatcatctccaagaagaaccgccgcgagatctgcaagtacctcttcca 78799
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 85.7 bits (43), Expect = 5e-14
 Identities = 88/103 (85%)
 Strand = Plus / Plus

                                                                            
Query: 109      gagggagtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcc 168
                ||||| || |||||||||||||||||||||||  |||| || ||||| ||| | ||||  
Sbjct: 20669679 gagggggttttgtacgccaagaaggactacaatttggcaaaacacccacagattgatgtg 20669738

                                                           
Query: 169      tcgaacctcgaggtcatcaagctcatgcagagcttcaagtcca 211
                 | |||||  |||||||||||||||||||||||||||||||||
Sbjct: 20669739 ccaaaccttcaggtcatcaagctcatgcagagcttcaagtcca 20669781



 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                                
Query: 60       gatcatctccaagaagaaccgccgcgagatctgcaagtacctcttcca 107
                ||||||| |||||||||||||    |||||||||||||||||||||||
Sbjct: 20669149 gatcatccccaagaagaaccggaatgagatctgcaagtacctcttcca 20669196



 Score = 46.1 bits (23), Expect = 0.043
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 16       cgccgcggcgccgccgtctccgtccccgccg 46
                |||||||||||||||||| ||||| ||||||
Sbjct: 21027310 cgccgcggcgccgccgtcgccgtcgccgccg 21027280



 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 16       cgccgcggcgccgccgtctc 35
                ||||||||||||||||||||
Sbjct: 20549721 cgccgcggcgccgccgtctc 20549740
to top
>dbj|AP004775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0451A10
          Length = 137046

 Score = 85.7 bits (43), Expect = 5e-14
 Identities = 88/103 (85%)
 Strand = Plus / Plus

                                                                         
Query: 109   gagggagtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcc 168
             ||||| || |||||||||||||||||||||||  |||| || ||||| ||| | ||||  
Sbjct: 20785 gagggggttttgtacgccaagaaggactacaatttggcaaaacacccacagattgatgtg 20844

                                                        
Query: 169   tcgaacctcgaggtcatcaagctcatgcagagcttcaagtcca 211
              | |||||  |||||||||||||||||||||||||||||||||
Sbjct: 20845 ccaaaccttcaggtcatcaagctcatgcagagcttcaagtcca 20887



 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 60    gatcatctccaagaagaaccgccgcgagatctgcaagtacctcttcca 107
             ||||||| |||||||||||||    |||||||||||||||||||||||
Sbjct: 20255 gatcatccccaagaagaaccggaatgagatctgcaagtacctcttcca 20302
to top
>dbj|AP005469.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0040I22
          Length = 134273

 Score = 85.7 bits (43), Expect = 5e-14
 Identities = 88/103 (85%)
 Strand = Plus / Plus

                                                                         
Query: 109   gagggagtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcc 168
             ||||| || |||||||||||||||||||||||  |||| || ||||| ||| | ||||  
Sbjct: 66534 gagggggttttgtacgccaagaaggactacaatttggcaaaacacccacagattgatgtg 66593

                                                        
Query: 169   tcgaacctcgaggtcatcaagctcatgcagagcttcaagtcca 211
              | |||||  |||||||||||||||||||||||||||||||||
Sbjct: 66594 ccaaaccttcaggtcatcaagctcatgcagagcttcaagtcca 66636



 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 60    gatcatctccaagaagaaccgccgcgagatctgcaagtacctcttcca 107
             ||||||| |||||||||||||    |||||||||||||||||||||||
Sbjct: 66004 gatcatccccaagaagaaccggaatgagatctgcaagtacctcttcca 66051
to top
>gb|DQ252521.1| Solanum tuberosum clone 111F10 40S ribosomal protein S10-like mRNA,
           complete cds
          Length = 859

 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 83/98 (84%)
 Strand = Plus / Plus

                                                                       
Query: 55  gccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggaggga 114
           |||||||| |||||  ||||||||||  | ||||||| ||| ||||||||||| ||||||
Sbjct: 46  gccatgattatctcagagaagaaccgtagagagatctccaaatacctcttccaagaggga 105

                                                 
Query: 115 gtcttgtacgccaagaaggactacaacctggccaagca 152
           || |  ||||| |||||||| |||||| ||||||||||
Sbjct: 106 gtgtgctacgcgaagaaggattacaacttggccaagca 143
to top
>gb|DQ268860.1| Solanum tuberosum clone 178H07 40S ribosomal protein S10-like
           protein mRNA, complete cds
          Length = 735

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                       
Query: 85  gagatctgcaagtacctcttccaggagggagtcttgtacgccaagaaggactacaacctg 144
           ||||||| ||||||||||||||| |||||||| |  |  || ||||||||||||||| ||
Sbjct: 64  gagatctccaagtacctcttccaagagggagtatgctttgctaagaaggactacaacttg 123

             
Query: 145 gc 146
           ||
Sbjct: 124 gc 125
to top
>gb|DQ252484.1| Solanum tuberosum clone 048B07 40S ribosomal protein S10-like mRNA,
           complete cds
          Length = 738

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                       
Query: 85  gagatctgcaagtacctcttccaggagggagtcttgtacgccaagaaggactacaacctg 144
           ||||||| ||||||||||||||| |||||||| |  |  || ||||||||||||||| ||
Sbjct: 62  gagatctccaagtacctcttccaagagggagtatgctttgctaagaaggactacaacttg 121

             
Query: 145 gc 146
           ||
Sbjct: 122 gc 123
to top
>ref|XM_466203.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2208

 Score = 46.1 bits (23), Expect = 0.043
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 16  cgccgcggcgccgccgtctccgtccccgccg 46
           |||||||||||||||||| ||||| ||||||
Sbjct: 294 cgccgcggcgccgccgtcgccgtcgccgccg 324
to top
>dbj|AP004017.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1008_F08
          Length = 105979

 Score = 46.1 bits (23), Expect = 0.043
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 16    cgccgcggcgccgccgtctccgtccccgccg 46
             |||||||||||||||||| ||||| ||||||
Sbjct: 29055 cgccgcggcgccgccgtcgccgtcgccgccg 29025
to top
>gb|AY961467.1| Phytophthora infestans clone MY-06-E-07 ribosomal protein S10 mRNA,
           complete cds
          Length = 546

 Score = 46.1 bits (23), Expect = 0.043
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 172 aacctcgaggtcatcaagctcatgcag 198
           |||||| ||||||||||||||||||||
Sbjct: 139 aacctccaggtcatcaagctcatgcag 165
to top
>ref|NM_123516.2| Arabidopsis thaliana structural constituent of ribosome AT5G41520
           mRNA, complete cds
          Length = 807

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 76  aaccgccgcgagatctgcaagtacctcttc 105
           |||||||| ||||||| |||||||||||||
Sbjct: 97  aaccgccgtgagatctccaagtacctcttc 126
to top
>gb|AF375440.1| Arabidopsis thaliana AT5g41520/MBK23_4 mRNA, complete cds
          Length = 780

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 76  aaccgccgcgagatctgcaagtacctcttc 105
           |||||||| ||||||| |||||||||||||
Sbjct: 97  aaccgccgtgagatctccaagtacctcttc 126
to top
>gb|AY060539.1| Arabidopsis thaliana AT5g41520/MBK23_4 mRNA, complete cds
          Length = 543

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 76  aaccgccgcgagatctgcaagtacctcttc 105
           |||||||| ||||||| |||||||||||||
Sbjct: 19  aaccgccgtgagatctccaagtacctcttc 48
to top
>gb|AY037240.1| Arabidopsis thaliana AT5g41520/MBK23_4 mRNA, complete cds
          Length = 781

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 76  aaccgccgcgagatctgcaagtacctcttc 105
           |||||||| ||||||| |||||||||||||
Sbjct: 97  aaccgccgtgagatctccaagtacctcttc 126
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 18     ccgcggcgccgccgtctccgtccccg 43
              |||||||||||||||| |||||||||
Sbjct: 137648 ccgcggcgccgccgtccccgtccccg 137623
to top
>emb|BX830030.1|CNS0A1DV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB54ZD12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 828

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 76  aaccgccgcgagatctgcaagtacctcttc 105
           |||||||| ||||||| |||||||||||||
Sbjct: 107 aaccgccgtgagatctccaagtacctcttc 136
to top
>emb|BX832280.1|CNS0A13B Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH62ZH01 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 783

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 76  aaccgccgcgagatctgcaagtacctcttc 105
           |||||||| ||||||| |||||||||||||
Sbjct: 91  aaccgccgtgagatctccaagtacctcttc 120
to top
>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBa0075G19
          Length = 163558

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 18   ccgcggcgccgccgtctccgtccccg 43
            |||||||||||||||| |||||||||
Sbjct: 2544 ccgcggcgccgccgtccccgtccccg 2519
to top
>dbj|AP006751.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:B1460A05
          Length = 143371

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 18     ccgcggcgccgccgtctccgtccccg 43
              |||||||||||||||| |||||||||
Sbjct: 137648 ccgcggcgccgccgtccccgtccccg 137623
to top
>dbj|AB005233.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBK23
          Length = 79837

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 76   aaccgccgcgagatctgcaagtacctcttc 105
            |||||||| ||||||| |||||||||||||
Sbjct: 5407 aaccgccgtgagatctccaagtacctcttc 5378
to top
>dbj|AK111058.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-D04, full
           insert sequence
          Length = 1109

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 18  ccgcggcgccgccgtctccgtccccg 43
           |||||||||||||||| |||||||||
Sbjct: 136 ccgcggcgccgccgtccccgtccccg 111
to top
>dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0681G01, complete sequence
          Length = 184118

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 18    ccgcggcgccgccgtctccgtccccg 43
             |||||||||||||||| |||||||||
Sbjct: 82894 ccgcggcgccgccgtccccgtccccg 82919
to top
>ref|NM_118706.2| Arabidopsis thaliana structural constituent of ribosome AT4G25740
           transcript variant AT4G25740.1 mRNA, complete cds
          Length = 746

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 187 aagctcatgcagagcttcaagtcca 211
           |||||||||||||| ||||||||||
Sbjct: 177 aagctcatgcagagtttcaagtcca 201
to top
>ref|NM_001036641.1| Arabidopsis thaliana structural constituent of ribosome AT4G25740
           transcript variant AT4G25740.2 mRNA, complete cds
          Length = 736

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 187 aagctcatgcagagcttcaagtcca 211
           |||||||||||||| ||||||||||
Sbjct: 192 aagctcatgcagagtttcaagtcca 216
to top
>ref|XM_473720.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1089

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 30  cgtctccgtccccgccgcgcc 50
           |||||||||||||||||||||
Sbjct: 150 cgtctccgtccccgccgcgcc 130
to top
>gb|AY113926.1| Arabidopsis thaliana putative ribosomal protein S10 (At4g25740)
           mRNA, complete cds
          Length = 565

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 187 aagctcatgcagagcttcaagtcca 211
           |||||||||||||| ||||||||||
Sbjct: 130 aagctcatgcagagtttcaagtcca 154
to top
>gb|AY035172.1| Arabidopsis thaliana putative ribosomal protein S10 (At4g25740)
           mRNA, complete cds
          Length = 762

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 187 aagctcatgcagagcttcaagtcca 211
           |||||||||||||| ||||||||||
Sbjct: 177 aagctcatgcagagtttcaagtcca 201
to top
>emb|AL161563.2|ATCHRIV63 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 63
          Length = 198777

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 187    aagctcatgcagagcttcaagtcca 211
              |||||||||||||| ||||||||||
Sbjct: 190367 aagctcatgcagagtttcaagtcca 190343
to top
>emb|AL050400.1|ATL73G19 Arabidopsis thaliana DNA chromosome 4, cosmid clone L73G19 (ESSA
             project)
          Length = 42446

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 187   aagctcatgcagagcttcaagtcca 211
             |||||||||||||| ||||||||||
Sbjct: 38860 aagctcatgcagagtttcaagtcca 38836
to top
>emb|AL049480.1|ATF14M19 Arabidopsis thaliana DNA chromosome 4, BAC clone F14M19 (ESSA
            project)
          Length = 91228

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 187  aagctcatgcagagcttcaagtcca 211
            |||||||||||||| ||||||||||
Sbjct: 5511 aagctcatgcagagtttcaagtcca 5487
to top
>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome
          Length = 195859

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 15     acgccgcggcgccgccgtctccgtccccg 43
              |||||||||||||| ||||||||| ||||
Sbjct: 181178 acgccgcggcgccggcgtctccgtgcccg 181206
to top
>dbj|AP003293.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0691E06
          Length = 166497

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 19    cgcggcgccgccgtctccgtccccgccgc 47
             ||||||||||||||| ||||| |||||||
Sbjct: 33511 cgcggcgccgccgtcgccgtcgccgccgc 33483
to top
>emb|AL662981.3|OSJN00182 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086O06,
              complete sequence
          Length = 178552

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 30     cgtctccgtccccgccgcgcc 50
              |||||||||||||||||||||
Sbjct: 132161 cgtctccgtccccgccgcgcc 132141
to top
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    cgccgtctccgtccccgccg 46
             ||||||||||||||||||||
Sbjct: 91663 cgccgtctccgtccccgccg 91644
to top
>ref|XM_475510.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 576

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 26  ccgccgtctccgtccccgccgcgc 49
           ||||||||||||||| ||||||||
Sbjct: 476 ccgccgtctccgtcctcgccgcgc 499
to top
>ref|XM_466124.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 699

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 16  cgccgcggcgccgccgtctc 35
           ||||||||||||||||||||
Sbjct: 540 cgccgcggcgccgccgtctc 559
to top
>ref|NM_196394.1| Oryza sativa (japonica cultivar-group) putative No apical meristem
            (NAM) protein (OSJNBa0044A10.11), mRNA
          Length = 1548

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 17   gccgcggcgccgccgtctcc 36
            ||||||||||||||||||||
Sbjct: 997  gccgcggcgccgccgtctcc 1016
to top
>ref|XM_469541.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 411

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 15  acgccgcggcgccgccgtctccgtccccgccg 46
           ||||||||||||||||||| ||| || |||||
Sbjct: 233 acgccgcggcgccgccgtcgccgccctcgccg 264
to top
>ref|XM_469540.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 525

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 15  acgccgcggcgccgccgtctccgtccccgccg 46
           ||||||||||||||||||| ||| || |||||
Sbjct: 268 acgccgcggcgccgccgtcgccgccctcgccg 237
to top
>ref|XM_473082.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 489

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 20  gcggcgccgccgtctccgtccccgccgc 47
           |||||||||||||||||| | |||||||
Sbjct: 379 gcggcgccgccgtctccgccaccgccgc 406
to top
>gb|AC093088.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1001_G01,
             complete sequence
          Length = 122768

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 26    ccgccgtctccgtccccgccgcgc 49
             ||||||||||||||| ||||||||
Sbjct: 41778 ccgccgtctccgtcctcgccgcgc 41755
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 15       acgccgcggcgccgccgtctccgtccccgccg 46
                ||||||||||||||||||| ||| || |||||
Sbjct: 28605248 acgccgcggcgccgccgtcgccgccctcgccg 28605279
to top
>ref|XM_541830.2| PREDICTED: Canis familiaris similar to 2-phosphodiesterase
           (LOC484714), mRNA
          Length = 2053

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 24  cgccgccgtctccgtccccgccgc 47
           |||||||||||||||| |||||||
Sbjct: 125 cgccgccgtctccgtcgccgccgc 102
to top
>ref|XM_571499.1| Cryptococcus neoformans var. neoformans JEC21 40s ribosomal protein
           s10 (CNF01650) partial mRNA
          Length = 737

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 58  atgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggaggg 113
           |||||||| |||||| |||||||| | |  |||| | ||||||||||| |||||||
Sbjct: 88  atgatcatttccaagcagaaccgcagggccatctacgagtacctcttcaaggaggg 143
to top
>gb|AC090681.13| Homo sapiens 12 BAC RP11-369C14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 93582

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 185   tcaagctcatgcagagcttc 204
             ||||||||||||||||||||
Sbjct: 45225 tcaagctcatgcagagcttc 45206
to top
>emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0116K07,
             complete sequence
          Length = 130779

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 20    gcggcgccgccgtctccgtccccgccgc 47
             |||||||||||||||||| | |||||||
Sbjct: 35349 gcggcgccgccgtctccgccaccgccgc 35322
to top
>gb|AC083943.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0044A10, from chromosome 10, complete sequence
          Length = 169270

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    gccgcggcgccgccgtctcc 36
             ||||||||||||||||||||
Sbjct: 39627 gccgcggcgccgccgtctcc 39646
to top
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII,
              complete sequence
          Length = 1476513

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 21     cggcgccgccgtctccgtccccgc 44
              ||||||||||||| ||||||||||
Sbjct: 176803 cggcgccgccgtcaccgtccccgc 176826
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 17       gccgcggcgccgccgtctcc 36
                ||||||||||||||||||||
Sbjct: 13084108 gccgcggcgccgccgtctcc 13084127
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 24      cgccgccgtctccgtccccgccgc 47
               |||||||||| |||||||||||||
Sbjct: 9576466 cgccgccgtcgccgtccccgccgc 9576443
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 26      ccgccgtctccgtccccgccgcgc 49
               ||||||||||||||| ||||||||
Sbjct: 1086167 ccgccgtctccgtcctcgccgcgc 1086144
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 15       acgccgcggcgccgccgtctccgtccccgccg 46
                ||||||||||||||||||| ||| || |||||
Sbjct: 28696572 acgccgcggcgccgccgtcgccgccctcgccg 28696603
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>gb|AC090882.10| Oryza sativa chromosome 3 BAC OSJNBa0014G15 genomic sequence, complete
             sequence
          Length = 158839

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 15    acgccgcggcgccgccgtctccgtccccgccg 46
             ||||||||||||||||||| ||| || |||||
Sbjct: 93648 acgccgcggcgccgccgtcgccgccctcgccg 93617
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>dbj|AP006465.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1059D01
          Length = 158792

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 24    cgccgccgtctccgtccccgccgc 47
             |||||||||| |||||||||||||
Sbjct: 84196 cgccgccgtcgccgtccccgccgc 84173
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>dbj|AP005611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0051E21
          Length = 137959

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    cgccgcggcgccgccgtctc 35
             ||||||||||||||||||||
Sbjct: 45279 cgccgcggcgccgccgtctc 45298
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>ref|NM_211444.1| Eremothecium gossypii AGL285Cp (AGL285C), mRNA
          Length = 1323

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 21  cggcgccgccgtctccgtccccgc 44
           ||||||||||||| ||||||||||
Sbjct: 351 cggcgccgccgtcaccgtccccgc 328
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>gb|AY450930.1| Chlamydomonas reinhardtii plus agglutinin (SAG1) gene, complete cds;
            and unknown gene
          Length = 18555

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 24   cgccgccgtctccgtccccg 43
            ||||||||||||||||||||
Sbjct: 8285 cgccgccgtctccgtccccg 8266
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 17       gccgcggcgccgccgtctcc 36
                ||||||||||||||||||||
Sbjct: 13091448 gccgcggcgccgccgtctcc 13091467
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>emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014K14,
              complete sequence
          Length = 150187

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 20     gcggcgccgccgtctccgtccccgccgc 47
              |||||||||||||||||| | |||||||
Sbjct: 101109 gcggcgccgccgtctccgccaccgccgc 101082


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,548,388
Number of Sequences: 3902068
Number of extensions: 1548388
Number of successful extensions: 126911
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 125552
Number of HSP's gapped (non-prelim): 1342
length of query: 211
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 189
effective length of database: 17,147,199,772
effective search space: 3240820756908
effective search space used: 3240820756908
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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