ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags29b24 |
|---|---|
| Clone Library Name | barley_pub |
>SAR1A_ARATH (O04834) GTP-binding protein SAR1A| Length = 193 Score = 160 bits (406), Expect = 2e-39 Identities = 77/94 (81%), Positives = 81/94 (86%) Frame = +2 Query: 68 KERFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVN 247 KERF ESKKE +VPFLILGNKIDIPYAASE+ELRYHLGLSNFTTGKGKVN Sbjct: 100 KERFAESKKELDALLSDESLASVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVN 159 Query: 248 LVDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK 349 L DSNVRPLEVFMCS+VRKMGYG+GFKWVSQYIK Sbjct: 160 LTDSNVRPLEVFMCSIVRKMGYGEGFKWVSQYIK 193
>SAR1A_BRACM (O04266) GTP-binding protein SAR1A| Length = 193 Score = 156 bits (394), Expect = 6e-38 Identities = 75/94 (79%), Positives = 80/94 (85%) Frame = +2 Query: 68 KERFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVN 247 KERF ESKKE VPFLILGNKIDIPYAASE+ELRYHLGLSNFTTGKGKV+ Sbjct: 100 KERFAESKKELDALLSDESLATVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVD 159 Query: 248 LVDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK 349 LV SNVRPLEVFMCS+VRKMGYG+GFKW+SQYIK Sbjct: 160 LVGSNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK 193
>SAR1B_ARATH (Q01474) GTP-binding protein SAR1B| Length = 193 Score = 149 bits (376), Expect = 7e-36 Identities = 71/93 (76%), Positives = 77/93 (82%) Frame = +2 Query: 68 KERFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVN 247 KERF ESK+E VPFLILGNKIDIPYAASE+ELRYHLGL+NFTTGKGKV Sbjct: 100 KERFAESKRELDALLSDEALATVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVT 159 Query: 248 LVDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYI 346 L DS VRPLEVFMCS+VRKMGYG+GFKW+SQYI Sbjct: 160 LGDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYI 192
>SAR2_LYCES (P52884) GTP-binding protein SAR2| Length = 193 Score = 145 bits (366), Expect = 1e-34 Identities = 67/94 (71%), Positives = 77/94 (81%) Frame = +2 Query: 68 KERFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVN 247 +ERF E+KKE NVPFLILGNKIDIPYAASE+ELRYHLGL+ TTGKG +N Sbjct: 100 RERFPEAKKELDGLLSDESLTNVPFLILGNKIDIPYAASEDELRYHLGLTGVTTGKGNIN 159 Query: 248 LVDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK 349 L +NVRP+EVFMCS+VRKMGYG+GFKW+SQYIK Sbjct: 160 LAGTNVRPIEVFMCSIVRKMGYGEGFKWMSQYIK 193
>SAR1B_BRACM (O04267) GTP-binding protein SAR1B| Length = 195 Score = 142 bits (358), Expect = 9e-34 Identities = 70/95 (73%), Positives = 76/95 (80%), Gaps = 2/95 (2%) Frame = +2 Query: 68 KERFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVN 247 KERF+ESKKE VPFLILGNKID PYAASE+ELRYHLGL+NFTTGKGKV Sbjct: 100 KERFSESKKELDALLSDDALATVPFLILGNKIDNPYAASEDELRYHLGLTNFTTGKGKVT 159 Query: 248 LV--DSNVRPLEVFMCSVVRKMGYGDGFKWVSQYI 346 DS VRPLEVFMCS+VRKMGYG+GFKW+SQYI Sbjct: 160 TAGGDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYI 194
>SAR1B_MOUSE (Q9CQC9) GTP-binding protein SAR1b| Length = 198 Score = 108 bits (269), Expect = 2e-23 Identities = 53/92 (57%), Positives = 63/92 (68%) Frame = +2 Query: 71 ERFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNL 250 ER ESK+E NVP LILGNKID P A SEE LR GL TTGKG V+L Sbjct: 106 ERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSL 165 Query: 251 VDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYI 346 + N RPLEVFMCSV+++ GYG+GF+W++QYI Sbjct: 166 KELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197
>SAR1B_CRIGR (Q9QVY3) GTP-binding protein SAR1b (Sar1) (GTBPB)| Length = 198 Score = 108 bits (269), Expect = 2e-23 Identities = 53/92 (57%), Positives = 63/92 (68%) Frame = +2 Query: 71 ERFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNL 250 ER ESK+E NVP LILGNKID P A SEE LR GL TTGKG V+L Sbjct: 106 ERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSL 165 Query: 251 VDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYI 346 + N RPLEVFMCSV+++ GYG+GF+W++QYI Sbjct: 166 KELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197
>SAR1B_HUMAN (Q9Y6B6) GTP-binding protein SAR1b (GTBPB)| Length = 198 Score = 107 bits (268), Expect = 2e-23 Identities = 52/92 (56%), Positives = 63/92 (68%) Frame = +2 Query: 71 ERFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNL 250 ER ESK+E NVP LILGNKID P A SEE LR GL TTGKG ++L Sbjct: 106 ERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSISL 165 Query: 251 VDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYI 346 + N RPLEVFMCSV+++ GYG+GF+W++QYI Sbjct: 166 KELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197
>SAR1A_HUMAN (Q9NR31) GTP-binding protein SAR1a (COPII-associated small GTPase)| Length = 198 Score = 102 bits (253), Expect = 1e-21 Identities = 51/91 (56%), Positives = 60/91 (65%) Frame = +2 Query: 74 RFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLV 253 R ESK E NVP LILGNKID A SEE+LR GL TTGKG V L Sbjct: 107 RLVESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLYGQTTGKGNVTLK 166 Query: 254 DSNVRPLEVFMCSVVRKMGYGDGFKWVSQYI 346 + N RP+EVFMCSV+++ GYG+GF+W+SQYI Sbjct: 167 ELNARPMEVFMCSVLKRQGYGEGFRWLSQYI 197
>SAR1A_MOUSE (P36536) GTP-binding protein SAR1a| Length = 198 Score = 100 bits (250), Expect = 3e-21 Identities = 51/91 (56%), Positives = 60/91 (65%) Frame = +2 Query: 74 RFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLV 253 R ESK E NVP LILGNKID A SEE+LR GL TTGKG V L Sbjct: 107 RLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIKGLYGQTTGKGNVTLK 166 Query: 254 DSNVRPLEVFMCSVVRKMGYGDGFKWVSQYI 346 + N RP+EVFMCSV+++ GYG+GF+W+SQYI Sbjct: 167 ELNARPMEVFMCSVLKRQGYGEGFRWLSQYI 197
>SAR1_TRIRE (P78976) GTP-binding protein SAR1| Length = 189 Score = 99.4 bits (246), Expect = 9e-21 Identities = 50/92 (54%), Positives = 62/92 (67%) Frame = +2 Query: 71 ERFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNL 250 ERF E+K E VPF+ILGNKID P A SE+ELR+ LGL TTGKG+V L Sbjct: 101 ERFPEAKAELDALLSMEELSKVPFVILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGRVQL 159 Query: 251 VDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYI 346 +RP+E+FMCSVV + GYGDG +W+S Y+ Sbjct: 160 --EGIRPIELFMCSVVMRQGYGDGIRWLSNYV 189
>SAR1_ASPNG (P52886) GTP-binding protein sarA| Length = 189 Score = 98.2 bits (243), Expect = 2e-20 Identities = 51/92 (55%), Positives = 62/92 (67%) Frame = +2 Query: 71 ERFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNL 250 E F ESK E VPFLILGNKID P A SE+++R+ LGL TTGKGKV L Sbjct: 101 ECFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDDVRHQLGLYQ-TTGKGKVPL 159 Query: 251 VDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYI 346 +RP+EVFMCSVV + GYG+G +W+SQY+ Sbjct: 160 --EGIRPIEVFMCSVVMRQGYGEGIRWLSQYV 189
>SAR1_SCHPO (Q01475) GTP-binding protein sar1| Length = 190 Score = 95.9 bits (237), Expect = 1e-19 Identities = 51/92 (55%), Positives = 62/92 (67%) Frame = +2 Query: 71 ERFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNL 250 ER +ESK E VPFLILGNKID P A SE+EL+ LGL TTGKG V+ Sbjct: 101 ERLSESKAELDALLAMEELARVPFLILGNKIDAPGAISEDELKAALGLYQ-TTGKG-VSK 158 Query: 251 VDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYI 346 +RP+EVFMCSVV + GYG+GFKW++QY+ Sbjct: 159 PVPGIRPIEVFMCSVVLRQGYGEGFKWLAQYV 190
>SAR1_TOBAC (P52885) GTP-binding protein SAR1| Length = 198 Score = 92.0 bits (227), Expect = 1e-18 Identities = 50/99 (50%), Positives = 63/99 (63%), Gaps = 5/99 (5%) Frame = +2 Query: 68 KERFTESKKEXXXXXXXXXXXNVPFLILGN---KIDIPYAASEE-ELRYHLGLSNFTT-G 232 KERF ESKKE FL L N +I+ P + RYH+G + + Sbjct: 100 KERFAESKKELDALLSGWSSLAHCFLFLDNWVTRIEHPICCLRKMNWRYHMGANGASPLA 159 Query: 233 KGKVNLVDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK 349 +GKVNL DSNVRP+EVFMCS+VR+MGYG+GF+W+SQYIK Sbjct: 160 RGKVNLADSNVRPVEVFMCSIVRQMGYGEGFRWMSQYIK 198
>SAR1_CAEEL (Q23445) GTP-binding protein SAR1| Length = 193 Score = 90.5 bits (223), Expect = 4e-18 Identities = 42/92 (45%), Positives = 60/92 (65%) Frame = +2 Query: 71 ERFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNL 250 ER ES+ E +VP LILGNKID P A SE++L++ L + + TGKG V+ Sbjct: 102 ERMQESRVELESLLQDEQIASVPVLILGNKIDKPGALSEDQLKWQLNIQHMCTGKGDVSR 161 Query: 251 VDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYI 346 + RP+EVFMCSV+++ GYG+G +W+ QY+ Sbjct: 162 NEMASRPMEVFMCSVLQRQGYGEGIRWLGQYL 193
>SAR1_PICPA (Q9P4C8) GTP-binding protein sar1| Length = 190 Score = 90.5 bits (223), Expect = 4e-18 Identities = 49/92 (53%), Positives = 58/92 (63%) Frame = +2 Query: 71 ERFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNL 250 ERF ES+ E VP L+LGNKID A SE ELR+ LGL TTGK KV L Sbjct: 101 ERFEESRVELDALLKIEELSKVPVLVLGNKIDKSTAVSENELRHALGLMT-TTGKDKVQL 159 Query: 251 VDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYI 346 V+ RPLEVF CS+ + GYG+G +W+SQYI Sbjct: 160 VEGQ-RPLEVFTCSIYLRQGYGEGIRWLSQYI 190
>SAR1_YEAST (P20606) GTP-binding protein SAR1| Length = 190 Score = 84.7 bits (208), Expect = 2e-16 Identities = 47/92 (51%), Positives = 58/92 (63%) Frame = +2 Query: 71 ERFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNL 250 ERF E++ E +VPF+ILGNKID P A SE ELR LGL N TTG ++ Sbjct: 104 ERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAVSEAELRSALGLLN-TTGSQRI-- 160 Query: 251 VDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYI 346 RP+EVFMCSVV + GY + F+W+SQYI Sbjct: 161 --EGQRPVEVFMCSVVMRNGYLEAFQWLSQYI 190
>SAR1_GIALA (Q8MQT8) GTP-binding protein Sar1| Length = 191 Score = 79.7 bits (195), Expect = 7e-15 Identities = 41/91 (45%), Positives = 53/91 (58%) Frame = +2 Query: 74 RFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLV 253 RF ES++ P LIL NK+DI A S E + G+ + TGKG NL Sbjct: 102 RFEESRRTLQELLDNHDLATTPILILSNKVDIQTAVSMETMVQSFGIQHLLTGKGGSNL- 160 Query: 254 DSNVRPLEVFMCSVVRKMGYGDGFKWVSQYI 346 S+ RPLEVF CSV+ + GY DGFKW+S+Y+ Sbjct: 161 RSDQRPLEVFPCSVINRFGYTDGFKWLSKYL 191
>ARL3_CAEEL (O45379) ADP-ribosylation factor-like protein 3| Length = 184 Score = 41.2 bits (95), Expect = 0.003 Identities = 29/94 (30%), Positives = 38/94 (40%) Frame = +2 Query: 68 KERFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVN 247 K+RF E E VP LI NK D+ AAS EE+ K+N Sbjct: 98 KKRFDEMNIELGELLDEEKLRKVPVLIFANKQDLVTAASSEEI------------TRKLN 145 Query: 248 LVDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK 349 L R + CS ++ G DG WV+ +K Sbjct: 146 LDLLRDRTWHIQACSALKNEGINDGITWVASNLK 179
>ARL8A_XENTR (Q6P8C8) ADP-ribosylation factor-like protein 8A (ADP-ribosylation| factor-like protein 10B) Length = 186 Score = 34.7 bits (78), Expect = 0.26 Identities = 18/50 (36%), Positives = 25/50 (50%) Frame = +2 Query: 68 KERFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLS 217 +++ SK E +P L+LGNK DIP A E+EL + LS Sbjct: 101 QDKIEASKNELHNLLDKAQLQGIPVLVLGNKRDIPGALDEKELIERMNLS 150
>ARL8A_HUMAN (Q96BM9) ADP-ribosylation factor-like protein 8A (ADP-ribosylation| factor-like protein 10B) (Novel small G protein indispensable for equal chromosome segregation 2) Length = 186 Score = 33.9 bits (76), Expect = 0.45 Identities = 18/50 (36%), Positives = 25/50 (50%) Frame = +2 Query: 68 KERFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLS 217 +E+ SK E +P L+LGNK D+P A E+EL + LS Sbjct: 101 QEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPGALDEKELIEKMNLS 150
>ARL8A_CHICK (Q5ZKQ8) ADP-ribosylation factor-like protein 8A| Length = 186 Score = 33.9 bits (76), Expect = 0.45 Identities = 18/50 (36%), Positives = 25/50 (50%) Frame = +2 Query: 68 KERFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLS 217 +E+ SK E +P L+LGNK D+P A E+EL + LS Sbjct: 101 QEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPGALDEKELIEKMNLS 150
>ARL11_BOVIN (Q58DI9) ADP-ribosylation factor-like protein 11| Length = 182 Score = 33.9 bits (76), Expect = 0.45 Identities = 18/50 (36%), Positives = 24/50 (48%) Frame = +2 Query: 74 RFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLSNF 223 R E+ E +VP L+L NK ++P A S E+R LGL F Sbjct: 95 RLPEAVAELREVLDDPSVASVPLLVLANKQEVPQALSLPEIRDRLGLQGF 144
>ARL8B_RAT (Q66HA6) ADP-ribosylation factor-like protein 8B| Length = 186 Score = 32.3 bits (72), Expect = 1.3 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +2 Query: 68 KERFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLS 217 +E+ S+ E +P L+LGNK D+P A E++L + LS Sbjct: 101 REKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLS 150
>ARL8B_PONPY (Q5R6E7) ADP-ribosylation factor-like protein 8B| Length = 186 Score = 32.3 bits (72), Expect = 1.3 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +2 Query: 68 KERFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLS 217 +E+ S+ E +P L+LGNK D+P A E++L + LS Sbjct: 101 REKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLS 150
>ARL8B_MOUSE (Q9CQW2) ADP-ribosylation factor-like protein 8B (ADP-ribosylation| factor-like protein 10C) (Novel small G protein indispensable for equal chromosome segregation 1) Length = 186 Score = 32.3 bits (72), Expect = 1.3 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +2 Query: 68 KERFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLS 217 +E+ S+ E +P L+LGNK D+P A E++L + LS Sbjct: 101 REKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLS 150
>ARL8B_MACFA (Q4R4S4) ADP-ribosylation factor-like protein 8B| Length = 186 Score = 32.3 bits (72), Expect = 1.3 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +2 Query: 68 KERFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLS 217 +E+ S+ E +P L+LGNK D+P A E++L + LS Sbjct: 101 REKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLS 150
>ARL8B_HUMAN (Q9NVJ2) ADP-ribosylation factor-like protein 8B (ADP-ribosylation| factor-like protein 10C) (Novel small G protein indispensable for equal chromosome segregation 1) Length = 186 Score = 32.3 bits (72), Expect = 1.3 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +2 Query: 68 KERFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLS 217 +E+ S+ E +P L+LGNK D+P A E++L + LS Sbjct: 101 REKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLS 150
>ARL8B_BOVIN (Q2KI07) ADP-ribosylation factor-like protein 8B| Length = 186 Score = 32.3 bits (72), Expect = 1.3 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +2 Query: 68 KERFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLS 217 +E+ S+ E +P L+LGNK D+P A E++L + LS Sbjct: 101 REKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLS 150
>ARL3_MOUSE (Q9WUL7) ADP-ribosylation factor-like protein 3| Length = 182 Score = 32.3 bits (72), Expect = 1.3 Identities = 24/93 (25%), Positives = 35/93 (37%) Frame = +2 Query: 68 KERFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVN 247 ++RF E+ +E VP LI NK D+ AA E+ L L Sbjct: 97 RKRFEETGQELTELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRD------ 150 Query: 248 LVDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYI 346 R ++ CS + G DG WV + + Sbjct: 151 ------RVWQIQSCSALTGEGVQDGMNWVCKNV 177
>ARL3_HUMAN (P36405) ADP-ribosylation factor-like protein 3| Length = 182 Score = 32.3 bits (72), Expect = 1.3 Identities = 24/93 (25%), Positives = 35/93 (37%) Frame = +2 Query: 68 KERFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVN 247 ++RF E+ +E VP LI NK D+ AA E+ L L Sbjct: 97 RKRFEETGQELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRD------ 150 Query: 248 LVDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYI 346 R ++ CS + G DG WV + + Sbjct: 151 ------RVWQIQSCSALTGEGVQDGMNWVCKNV 177
>ARL3_RAT (P37996) ADP-ribosylation factor-like protein 3 (ARD3)| Length = 182 Score = 31.6 bits (70), Expect = 2.2 Identities = 23/93 (24%), Positives = 35/93 (37%) Frame = +2 Query: 68 KERFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVN 247 ++RF E+ +E VP L+ NK D+ AA E+ L L Sbjct: 97 RKRFEETGQELTELLEEEKLSCVPVLVFANKQDLLTAAPAAEIAEGLNLHTIRD------ 150 Query: 248 LVDSNVRPLEVFMCSVVRKMGYGDGFKWVSQYI 346 R ++ CS + G DG WV + + Sbjct: 151 ------RVWQIQSCSALTGEGVQDGMNWVCKNV 177
>ARL8B_BRARE (Q6NZW8) ADP-ribosylation factor-like protein 8B| Length = 186 Score = 30.8 bits (68), Expect = 3.8 Identities = 15/50 (30%), Positives = 25/50 (50%) Frame = +2 Query: 68 KERFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLS 217 +E+ S+ E +P L+LGNK D+P A E++L + L+ Sbjct: 101 REKVEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLA 150
>ARL11_MOUSE (Q6P3A9) ADP-ribosylation factor-like protein 11| Length = 176 Score = 30.8 bits (68), Expect = 3.8 Identities = 18/50 (36%), Positives = 22/50 (44%) Frame = +2 Query: 74 RFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLSNF 223 R E+ E VPFL+L NK + P A E+R LGL F Sbjct: 95 RLPEAVAELKEVLEDPNMAGVPFLVLANKQEAPGALPLLEIRNRLGLEGF 144
>ARF_AJECA (P34727) ADP-ribosylation factor| Length = 182 Score = 30.4 bits (67), Expect = 5.0 Identities = 15/53 (28%), Positives = 25/53 (47%) Frame = +2 Query: 68 KERFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGLSNFT 226 ++R E+++E + L+ NK D+P A S E+ LGL + T Sbjct: 96 RDRVVEAREELQRMLNEDELRDALLLVFANKQDLPNAMSPAEITQQLGLQSLT 148
>ARF_CRYNE (P34728) ADP-ribosylation factor| Length = 181 Score = 29.6 bits (65), Expect = 8.5 Identities = 15/49 (30%), Positives = 24/49 (48%) Frame = +2 Query: 68 KERFTESKKEXXXXXXXXXXXNVPFLILGNKIDIPYAASEEELRYHLGL 214 +ER TE+++E + L+ NK D+P A + E+ LGL Sbjct: 96 RERITEAREELQRMLSEDELRDALLLVFANKQDLPNAMNAAEITDKLGL 144 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,944,388 Number of Sequences: 219361 Number of extensions: 1830790 Number of successful extensions: 4319 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 4206 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4309 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6427774254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
