ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags29b23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_194472.1| Oryza sativa (japonica cultivar-group) putative... 149 1e-32
2dbj|AK102556.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 1e-32
3gb|AC079632.4| Oryza sativa (japonica cultivar-group) chromosome... 98 5e-17
4gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 98 5e-17
5gb|AC166065.1| Oryza sativa (japonica cultivar-group) chromosome... 98 5e-17
6gb|AC108883.1| Genomic sequence for (japonica cultivar-group) cu... 98 5e-17
7dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 98 5e-17
8gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 98 5e-17
9dbj|AK061113.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.010
10emb|AL355365.10| Human DNA sequence from clone RP11-361F15 on ch... 42 2.3
11gb|AC158168.2| Mus musculus BAC clone RP23-325B1 from chromosome... 42 2.3
12emb|CR318587.6| Zebrafish DNA sequence from clone CH211-171B20 i... 42 2.3
13gb|AC104808.4| Homo sapiens BAC clone RP11-636J1 from 4, complet... 42 2.3
14dbj|AK139520.1| Mus musculus 2 cells egg cDNA, RIKEN full-length... 42 2.3
15gb|AC096636.1| Homo sapiens chromosome 1 clone RP11-75I2, comple... 42 2.3
16emb|BX005418.11| Zebrafish DNA sequence from clone CH211-284C3, ... 42 2.3
17emb|AL954708.10| Zebrafish DNA sequence from clone CH211-160I4, ... 42 2.3
18gb|AC154042.1| Drosophila melanogaster clone BACR46E23, complete... 40 9.2
19gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete... 40 9.2
20gb|AC124058.6| Homo sapiens chromosome 11, clone RP6-130A9, comp... 40 9.2
21gb|AC012596.4| Homo sapiens BAC clone CTD-2523K17 from 7, comple... 40 9.2
22gb|AC151425.22| Medicago truncatula clone mth2-4l6, complete seq... 40 9.2
23emb|AL512283.12| Human DNA sequence from clone RP11-95G17 on chr... 40 9.2
24gb|AC069233.16| Homo sapiens 3 BAC RP11-95H16 (Roswell Park Canc... 40 9.2
25gb|AC105902.2| Homo sapiens chromosome 3 clone RP11-578F5, compl... 40 9.2
26gb|AC152871.14| Medicago truncatula clone mth2-83e5, complete se... 40 9.2
27gb|AY113447.1| Drosophila melanogaster RE31047 full insert cDNA 40 9.2
28gb|AF388659.1| Apis mellifera 1D-myo-inositol-trisphosphate 3-ki... 40 9.2
29ref|NM_080762.2| Drosophila melanogaster Casein kinase II subun... 40 9.2
30gb|AC010170.3| Homo sapiens 3p22-21.3 BAC RPCI11-487J21 (Roswell... 40 9.2
31gb|AC079385.18| Homo sapiens 12q BAC RP11-482D24 (Roswell Park C... 40 9.2
32gb|AC055860.13| Homo sapiens chromosome 11, clone RP11-195O23, c... 40 9.2
33emb|AL805980.28| Mouse DNA sequence from clone RP23-49C8 on chro... 40 9.2
34gb|AC069394.6| Homo sapiens BAC clone RP11-731F1 from 2, complet... 40 9.2
35gb|AF539527.1| Mus musculus strain C57BL/6 O-linked GlcNAc trans... 40 9.2
36dbj|AK200108.1| Mus musculus cDNA, clone:Y1G0133G18, strand:minu... 40 9.2
37emb|AL590390.5| Mouse DNA sequence from clone RP23-294H14 on chr... 40 9.2
38gb|AC005728.1|AC005728 Homo sapiens Chromosome 11p14.3 PAC clone... 40 9.2
39gb|AE003487.2| Drosophila melanogaster chromosome X, section 39 ... 40 9.2
40gb|AC145909.3| Gallus gallus BAC clone CH261-43H20 from chromoso... 40 9.2
41emb|AL732450.5| Mouse DNA sequence from clone RP23-190H10 on chr... 40 9.2
42emb|AL844160.4| Mouse DNA sequence from clone RP23-340N6 on chro... 40 9.2 
>ref|NM_194472.1| Oryza sativa (japonica cultivar-group) putative protein kinase
            (OSJNBa0046L02.4), mRNA
          Length = 2292

 Score =  149 bits (75), Expect = 1e-32
 Identities = 275/339 (81%), Gaps = 2/339 (0%)
 Strand = Plus / Plus

                                                                        
Query: 33   tcaagcaagtcatggttgaagctgagggatcaaggaaggaagcttttcttgagcttctca 92
            ||||||| |||||  | ||||| ||| ||||||||||||| |||||| ||||||||||||
Sbjct: 959  tcaagcaggtcattctagaagcagagagatcaaggaaggatgcttttgttgagcttctca 1018

                                                                        
Query: 93   agcgcaaagaaatagagtcaaaagtggacagtgcttttatcagggtaaaagctgccgagt 152
            |||||||||| | |||||||| ||| | | ||| | ||  ||||| ||||||| | ||||
Sbjct: 1019 agcgcaaagatacagagtcaagagtagccggtgttattgccagggcaaaagcttctgagt 1078

                                                                        
Query: 153  cttctaaaaaacgagaaatgaaaataagggaggaacttgaagatttattcctagccacga 212
               || |||||| ||||||||||||  ||||||||||||||| ||| ||   |||||| |
Sbjct: 1079 tcgctcaaaaacaagaaatgaaaatgcgggaggaacttgaagctttgttgacagccacaa 1138

                                                                        
Query: 213  gaaagcagcatgaagatctggcaacaagtaaagaaaaagctatgactgtgttgggctctt 272
             |||||||||||||||||| |||  || ||||||||| ||||     | ||||| |||||
Sbjct: 1139 aaaagcagcatgaagatcttgcagaaaataaagaaaaggctacagaagggttggactctt 1198

                                                                        
Query: 273  ctatgagaagattagacatcctagatgctcgtgcaaaaaacatgagc-cttaggatggat 331
            | ||||||| | ||| |||||||||||| ||||| |||| ||| |||  || ||||| ||
Sbjct: 1199 cgatgagaaaactagccatcctagatgcacgtgctaaaagcat-agcttttcggatgaat 1257

                                                   
Query: 332  gaagctgtggcggagctcgaggtgattcaatcttccata 370
            ||||||||||| |||||  |  |||||||||||||||||
Sbjct: 1258 gaagctgtggcagagctgaaattgattcaatcttccata 1296



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                 
Query: 612  ttatgaacaggagtgtgatgattcataagttgcactc 648
            |||||||||| ||||| |||||| |||||||||||||
Sbjct: 1499 ttatgaacagaagtgtaatgatttataagttgcactc 1535
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>dbj|AK102556.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033097G03, full
            insert sequence
          Length = 2777

 Score =  149 bits (75), Expect = 1e-32
 Identities = 275/339 (81%), Gaps = 2/339 (0%)
 Strand = Plus / Plus

                                                                        
Query: 33   tcaagcaagtcatggttgaagctgagggatcaaggaaggaagcttttcttgagcttctca 92
            ||||||| |||||  | ||||| ||| ||||||||||||| |||||| ||||||||||||
Sbjct: 968  tcaagcaggtcattctagaagcagagagatcaaggaaggatgcttttgttgagcttctca 1027

                                                                        
Query: 93   agcgcaaagaaatagagtcaaaagtggacagtgcttttatcagggtaaaagctgccgagt 152
            |||||||||| | |||||||| ||| | | ||| | ||  ||||| ||||||| | ||||
Sbjct: 1028 agcgcaaagatacagagtcaagagtagccggtgttattgccagggcaaaagcttctgagt 1087

                                                                        
Query: 153  cttctaaaaaacgagaaatgaaaataagggaggaacttgaagatttattcctagccacga 212
               || |||||| ||||||||||||  ||||||||||||||| ||| ||   |||||| |
Sbjct: 1088 tcgctcaaaaacaagaaatgaaaatgcgggaggaacttgaagctttgttgacagccacaa 1147

                                                                        
Query: 213  gaaagcagcatgaagatctggcaacaagtaaagaaaaagctatgactgtgttgggctctt 272
             |||||||||||||||||| |||  || ||||||||| ||||     | ||||| |||||
Sbjct: 1148 aaaagcagcatgaagatcttgcagaaaataaagaaaaggctacagaagggttggactctt 1207

                                                                        
Query: 273  ctatgagaagattagacatcctagatgctcgtgcaaaaaacatgagc-cttaggatggat 331
            | ||||||| | ||| |||||||||||| ||||| |||| ||| |||  || ||||| ||
Sbjct: 1208 cgatgagaaaactagccatcctagatgcacgtgctaaaagcat-agcttttcggatgaat 1266

                                                   
Query: 332  gaagctgtggcggagctcgaggtgattcaatcttccata 370
            ||||||||||| |||||  |  |||||||||||||||||
Sbjct: 1267 gaagctgtggcagagctgaaattgattcaatcttccata 1305



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                 
Query: 612  ttatgaacaggagtgtgatgattcataagttgcactc 648
            |||||||||| ||||| |||||| |||||||||||||
Sbjct: 1544 ttatgaacagaagtgtaatgatttataagttgcactc 1580
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>gb|AC079632.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0046L02, complete sequence
          Length = 142381

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 174/213 (81%), Gaps = 2/213 (0%)
 Strand = Plus / Plus

                                                                         
Query: 159   aaaaacgagaaatgaaaataagggaggaacttgaagatttattcctagccacgagaaagc 218
             |||||| ||||||||||||  ||||||||||||||| ||| ||   |||||| | |||||
Sbjct: 35721 aaaaacaagaaatgaaaatgcgggaggaacttgaagctttgttgacagccacaaaaaagc 35780

                                                                         
Query: 219   agcatgaagatctggcaacaagtaaagaaaaagctatgactgtgttgggctcttctatga 278
             ||||||||||||| |||  || ||||||||| ||||     | ||||| |||||| ||||
Sbjct: 35781 agcatgaagatcttgcagaaaataaagaaaaggctacagaagggttggactcttcgatga 35840

                                                                         
Query: 279   gaagattagacatcctagatgctcgtgcaaaaaacatgagc-cttaggatggatgaagct 337
             ||| | ||| |||||||||||| ||||| |||| ||| |||  || ||||| ||||||||
Sbjct: 35841 gaaaactagccatcctagatgcacgtgctaaaagcat-agcttttcggatgaatgaagct 35899

                                              
Query: 338   gtggcggagctcgaggtgattcaatcttccata 370
             ||||| |||||  |  |||||||||||||||||
Sbjct: 35900 gtggcagagctgaaattgattcaatcttccata 35932



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 71/81 (87%)
 Strand = Plus / Plus

                                                                         
Query: 33    tcaagcaagtcatggttgaagctgagggatcaaggaaggaagcttttcttgagcttctca 92
             ||||||| |||||  | ||||| ||| ||||||||||||| |||||| ||||||||||||
Sbjct: 35424 tcaagcaggtcattctagaagcagagagatcaaggaaggatgcttttgttgagcttctca 35483

                                  
Query: 93    agcgcaaagaaatagagtcaa 113
             |||||||||| | ||||||||
Sbjct: 35484 agcgcaaagatacagagtcaa 35504



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 612   ttatgaacaggagtgtgatgattcataagttgcactc 648
             |||||||||| ||||| |||||| |||||||||||||
Sbjct: 36171 ttatgaacagaagtgtaatgatttataagttgcactc 36207
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>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 174/213 (81%), Gaps = 2/213 (0%)
 Strand = Plus / Plus

                                                                         
Query: 159   aaaaacgagaaatgaaaataagggaggaacttgaagatttattcctagccacgagaaagc 218
             |||||| ||||||||||||  ||||||||||||||| ||| ||   |||||| | |||||
Sbjct: 49827 aaaaacaagaaatgaaaatgcgggaggaacttgaagctttgttgacagccacaaaaaagc 49886

                                                                         
Query: 219   agcatgaagatctggcaacaagtaaagaaaaagctatgactgtgttgggctcttctatga 278
             ||||||||||||| |||  || ||||||||| ||||     | ||||| |||||| ||||
Sbjct: 49887 agcatgaagatcttgcagaaaataaagaaaaggctacagaagggttggactcttcgatga 49946

                                                                         
Query: 279   gaagattagacatcctagatgctcgtgcaaaaaacatgagc-cttaggatggatgaagct 337
             ||| | ||| |||||||||||| ||||| |||| ||| |||  || ||||| ||||||||
Sbjct: 49947 gaaaactagccatcctagatgcacgtgctaaaagcat-agcttttcggatgaatgaagct 50005

                                              
Query: 338   gtggcggagctcgaggtgattcaatcttccata 370
             ||||| |||||  |  |||||||||||||||||
Sbjct: 50006 gtggcagagctgaaattgattcaatcttccata 50038



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 71/81 (87%)
 Strand = Plus / Plus

                                                                         
Query: 33    tcaagcaagtcatggttgaagctgagggatcaaggaaggaagcttttcttgagcttctca 92
             ||||||| |||||  | ||||| ||| ||||||||||||| |||||| ||||||||||||
Sbjct: 49530 tcaagcaggtcattctagaagcagagagatcaaggaaggatgcttttgttgagcttctca 49589

                                  
Query: 93    agcgcaaagaaatagagtcaa 113
             |||||||||| | ||||||||
Sbjct: 49590 agcgcaaagatacagagtcaa 49610



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 612   ttatgaacaggagtgtgatgattcataagttgcactc 648
             |||||||||| ||||| |||||| |||||||||||||
Sbjct: 50277 ttatgaacagaagtgtaatgatttataagttgcactc 50313
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>gb|AC166065.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1136E01,
             complete sequence
          Length = 105139

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 174/213 (81%), Gaps = 2/213 (0%)
 Strand = Plus / Plus

                                                                         
Query: 159   aaaaacgagaaatgaaaataagggaggaacttgaagatttattcctagccacgagaaagc 218
             |||||| ||||||||||||  ||||||||||||||| ||| ||   |||||| | |||||
Sbjct: 54966 aaaaacaagaaatgaaaatgcgggaggaacttgaagctttgttgacagccacaaaaaagc 55025

                                                                         
Query: 219   agcatgaagatctggcaacaagtaaagaaaaagctatgactgtgttgggctcttctatga 278
             ||||||||||||| |||  || ||||||||| ||||     | ||||| |||||| ||||
Sbjct: 55026 agcatgaagatcttgcagaaaataaagaaaaggctacagaagggttggactcttcgatga 55085

                                                                         
Query: 279   gaagattagacatcctagatgctcgtgcaaaaaacatgagc-cttaggatggatgaagct 337
             ||| | ||| |||||||||||| ||||| |||| ||| |||  || ||||| ||||||||
Sbjct: 55086 gaaaactagccatcctagatgcacgtgctaaaagcat-agcttttcggatgaatgaagct 55144

                                              
Query: 338   gtggcggagctcgaggtgattcaatcttccata 370
             ||||| |||||  |  |||||||||||||||||
Sbjct: 55145 gtggcagagctgaaattgattcaatcttccata 55177



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 71/81 (87%)
 Strand = Plus / Plus

                                                                         
Query: 33    tcaagcaagtcatggttgaagctgagggatcaaggaaggaagcttttcttgagcttctca 92
             ||||||| |||||  | ||||| ||| ||||||||||||| |||||| ||||||||||||
Sbjct: 54669 tcaagcaggtcattctagaagcagagagatcaaggaaggatgcttttgttgagcttctca 54728

                                  
Query: 93    agcgcaaagaaatagagtcaa 113
             |||||||||| | ||||||||
Sbjct: 54729 agcgcaaagatacagagtcaa 54749



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 612   ttatgaacaggagtgtgatgattcataagttgcactc 648
             |||||||||| ||||| |||||| |||||||||||||
Sbjct: 55416 ttatgaacagaagtgtaatgatttataagttgcactc 55452
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>gb|AC108883.1| Genomic sequence for (japonica cultivar-group) cultivar Nipponbare
             clone OJ1136E01, from chromosome 10, complete sequence
          Length = 113856

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 174/213 (81%), Gaps = 2/213 (0%)
 Strand = Plus / Minus

                                                                         
Query: 159   aaaaacgagaaatgaaaataagggaggaacttgaagatttattcctagccacgagaaagc 218
             |||||| ||||||||||||  ||||||||||||||| ||| ||   |||||| | |||||
Sbjct: 64030 aaaaacaagaaatgaaaatgcgggaggaacttgaagctttgttgacagccacaaaaaagc 63971

                                                                         
Query: 219   agcatgaagatctggcaacaagtaaagaaaaagctatgactgtgttgggctcttctatga 278
             ||||||||||||| |||  || ||||||||| ||||     | ||||| |||||| ||||
Sbjct: 63970 agcatgaagatcttgcagaaaataaagaaaaggctacagaagggttggactcttcgatga 63911

                                                                         
Query: 279   gaagattagacatcctagatgctcgtgcaaaaaacatgagc-cttaggatggatgaagct 337
             ||| | ||| |||||||||||| ||||| |||| ||| |||  || ||||| ||||||||
Sbjct: 63910 gaaaactagccatcctagatgcacgtgctaaaagcat-agcttttcggatgaatgaagct 63852

                                              
Query: 338   gtggcggagctcgaggtgattcaatcttccata 370
             ||||| |||||  |  |||||||||||||||||
Sbjct: 63851 gtggcagagctgaaattgattcaatcttccata 63819



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 71/81 (87%)
 Strand = Plus / Minus

                                                                         
Query: 33    tcaagcaagtcatggttgaagctgagggatcaaggaaggaagcttttcttgagcttctca 92
             ||||||| |||||  | ||||| ||| ||||||||||||| |||||| ||||||||||||
Sbjct: 64327 tcaagcaggtcattctagaagcagagagatcaaggaaggatgcttttgttgagcttctca 64268

                                  
Query: 93    agcgcaaagaaatagagtcaa 113
             |||||||||| | ||||||||
Sbjct: 64267 agcgcaaagatacagagtcaa 64247



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                  
Query: 612   ttatgaacaggagtgtgatgattcataagttgcactc 648
             |||||||||| ||||| |||||| |||||||||||||
Sbjct: 63580 ttatgaacagaagtgtaatgatttataagttgcactc 63544
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10,
             complete sequence
          Length = 22685906

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 174/213 (81%), Gaps = 2/213 (0%)
 Strand = Plus / Plus

                                                                         
Query: 159   aaaaacgagaaatgaaaataagggaggaacttgaagatttattcctagccacgagaaagc 218
             |||||| ||||||||||||  ||||||||||||||| ||| ||   |||||| | |||||
Sbjct: 49827 aaaaacaagaaatgaaaatgcgggaggaacttgaagctttgttgacagccacaaaaaagc 49886

                                                                         
Query: 219   agcatgaagatctggcaacaagtaaagaaaaagctatgactgtgttgggctcttctatga 278
             ||||||||||||| |||  || ||||||||| ||||     | ||||| |||||| ||||
Sbjct: 49887 agcatgaagatcttgcagaaaataaagaaaaggctacagaagggttggactcttcgatga 49946

                                                                         
Query: 279   gaagattagacatcctagatgctcgtgcaaaaaacatgagc-cttaggatggatgaagct 337
             ||| | ||| |||||||||||| ||||| |||| ||| |||  || ||||| ||||||||
Sbjct: 49947 gaaaactagccatcctagatgcacgtgctaaaagcat-agcttttcggatgaatgaagct 50005

                                              
Query: 338   gtggcggagctcgaggtgattcaatcttccata 370
             ||||| |||||  |  |||||||||||||||||
Sbjct: 50006 gtggcagagctgaaattgattcaatcttccata 50038



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 71/81 (87%)
 Strand = Plus / Plus

                                                                         
Query: 33    tcaagcaagtcatggttgaagctgagggatcaaggaaggaagcttttcttgagcttctca 92
             ||||||| |||||  | ||||| ||| ||||||||||||| |||||| ||||||||||||
Sbjct: 49530 tcaagcaggtcattctagaagcagagagatcaaggaaggatgcttttgttgagcttctca 49589

                                  
Query: 93    agcgcaaagaaatagagtcaa 113
             |||||||||| | ||||||||
Sbjct: 49590 agcgcaaagatacagagtcaa 49610



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 612   ttatgaacaggagtgtgatgattcataagttgcactc 648
             |||||||||| ||||| |||||| |||||||||||||
Sbjct: 50277 ttatgaacagaagtgtaatgatttataagttgcactc 50313
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 174/213 (81%), Gaps = 2/213 (0%)
 Strand = Plus / Plus

                                                                         
Query: 159   aaaaacgagaaatgaaaataagggaggaacttgaagatttattcctagccacgagaaagc 218
             |||||| ||||||||||||  ||||||||||||||| ||| ||   |||||| | |||||
Sbjct: 49825 aaaaacaagaaatgaaaatgcgggaggaacttgaagctttgttgacagccacaaaaaagc 49884

                                                                         
Query: 219   agcatgaagatctggcaacaagtaaagaaaaagctatgactgtgttgggctcttctatga 278
             ||||||||||||| |||  || ||||||||| ||||     | ||||| |||||| ||||
Sbjct: 49885 agcatgaagatcttgcagaaaataaagaaaaggctacagaagggttggactcttcgatga 49944

                                                                         
Query: 279   gaagattagacatcctagatgctcgtgcaaaaaacatgagc-cttaggatggatgaagct 337
             ||| | ||| |||||||||||| ||||| |||| ||| |||  || ||||| ||||||||
Sbjct: 49945 gaaaactagccatcctagatgcacgtgctaaaagcat-agcttttcggatgaatgaagct 50003

                                              
Query: 338   gtggcggagctcgaggtgattcaatcttccata 370
             ||||| |||||  |  |||||||||||||||||
Sbjct: 50004 gtggcagagctgaaattgattcaatcttccata 50036



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 71/81 (87%)
 Strand = Plus / Plus

                                                                         
Query: 33    tcaagcaagtcatggttgaagctgagggatcaaggaaggaagcttttcttgagcttctca 92
             ||||||| |||||  | ||||| ||| ||||||||||||| |||||| ||||||||||||
Sbjct: 49528 tcaagcaggtcattctagaagcagagagatcaaggaaggatgcttttgttgagcttctca 49587

                                  
Query: 93    agcgcaaagaaatagagtcaa 113
             |||||||||| | ||||||||
Sbjct: 49588 agcgcaaagatacagagtcaa 49608



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 612   ttatgaacaggagtgtgatgattcataagttgcactc 648
             |||||||||| ||||| |||||| |||||||||||||
Sbjct: 50275 ttatgaacagaagtgtaatgatttataagttgcactc 50311
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>dbj|AK061113.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-D08, full
           insert sequence
          Length = 1101

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 612 ttatgaacaggagtgtgatgattcataagttgcactc 648
           |||||||||| ||||| |||||| |||||||||||||
Sbjct: 72  ttatgaacagaagtgtaatgatttataagttgcactc 108
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>emb|AL355365.10| Human DNA sequence from clone RP11-361F15 on chromosome 6 Contains the
             3' end of the gene for tomosyn (LOC134957) (contains
             FLJ30922), a putative novel gene and a Yes-associated
             protein 1, 65kD (YAP1) pseudogene, complete sequence
          Length = 162750

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 151   gtcttctaaaaaacgagaaat 171
             |||||||||||||||||||||
Sbjct: 80193 gtcttctaaaaaacgagaaat 80173
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>gb|AC158168.2| Mus musculus BAC clone RP23-325B1 from chromosome 6, complete sequence
          Length = 184841

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 270    cttctatgagaagattagaca 290
              |||||||||||||||||||||
Sbjct: 123309 cttctatgagaagattagaca 123289
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>emb|CR318587.6| Zebrafish DNA sequence from clone CH211-171B20 in linkage group 24,
             complete sequence
          Length = 164331

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 444   gcacatacagccattccaagt 464
             |||||||||||||||||||||
Sbjct: 93955 gcacatacagccattccaagt 93975
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>gb|AC104808.4| Homo sapiens BAC clone RP11-636J1 from 4, complete sequence
          Length = 162461

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 229    tctggcaacaagtaaagaaaa 249
              |||||||||||||||||||||
Sbjct: 118162 tctggcaacaagtaaagaaaa 118142
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>dbj|AK139520.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library,
           clone:B020002N07 product:hypothetical protein, full
           insert sequence
          Length = 3042

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 270 cttctatgagaagattagaca 290
           |||||||||||||||||||||
Sbjct: 180 cttctatgagaagattagaca 160
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>gb|AC096636.1| Homo sapiens chromosome 1 clone RP11-75I2, complete sequence
          Length = 153327

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 591   ggtgcatttacaaaggaaaag 611
             |||||||||||||||||||||
Sbjct: 82209 ggtgcatttacaaaggaaaag 82189
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>emb|BX005418.11| Zebrafish DNA sequence from clone CH211-284C3, complete sequence
          Length = 156060

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 444   gcacatacagccattccaagt 464
             |||||||||||||||||||||
Sbjct: 75751 gcacatacagccattccaagt 75731
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>emb|AL954708.10| Zebrafish DNA sequence from clone CH211-160I4, complete sequence
          Length = 163996

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                          
Query: 230   ctggcaacaagtaaagaaaaagctatgac 258
             ||||||||||||||| |||||||||||||
Sbjct: 10877 ctggcaacaagtaaa-aaaaagctatgac 10850
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>gb|AC154042.1| Drosophila melanogaster clone BACR46E23, complete sequence
          Length = 181148

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 161   aaacgagaaatgaaaataagggag 184
             ||||||||||||||||||| ||||
Sbjct: 89258 aaacgagaaatgaaaataatggag 89281
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>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome
          Length = 2201561

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      tctaaggaaatgatggagtc 27
              ||||||||||||||||||||
Sbjct: 851834 tctaaggaaatgatggagtc 851815
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>gb|AC124058.6| Homo sapiens chromosome 11, clone RP6-130A9, complete sequence
          Length = 131420

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 304   tgcaaaaaacatgagccttaggat 327
             ||||||||| ||||||||||||||
Sbjct: 77328 tgcaaaaaatatgagccttaggat 77351
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>gb|AC012596.4| Homo sapiens BAC clone CTD-2523K17 from 7, complete sequence
          Length = 154859

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 592    gtgcatttacaaaggaaaag 611
              ||||||||||||||||||||
Sbjct: 138439 gtgcatttacaaaggaaaag 138458
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>gb|AC151425.22| Medicago truncatula clone mth2-4l6, complete sequence
          Length = 122088

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 171   tgaaaataagggaggaactt 190
             ||||||||||||||||||||
Sbjct: 98777 tgaaaataagggaggaactt 98796
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>emb|AL512283.12| Human DNA sequence from clone RP11-95G17 on chromosome 6 Contains the
              PKIB gene for protein kinase (cAMP-dependent, catalytic)
              inhibitor beta (protein kinase, cAMP-dependent, catalytic,
              inhibitor 2 (PRKACN2)) (similar to FLJ23817). Contains a
              CpG island, complete sequence
          Length = 153677

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 555    tctcagagagcttcaaatta 574
              ||||||||||||||||||||
Sbjct: 111044 tctcagagagcttcaaatta 111063
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>gb|AC069233.16| Homo sapiens 3 BAC RP11-95H16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 154204

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 180   gggaggaacttgaagatttattcc 203
             ||||||||| ||||||||||||||
Sbjct: 59201 gggaggaacatgaagatttattcc 59178
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>gb|AC105902.2| Homo sapiens chromosome 3 clone RP11-578F5, complete sequence
          Length = 163115

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 185    gaacttgaagatttattcct 204
              ||||||||||||||||||||
Sbjct: 156202 gaacttgaagatttattcct 156221
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>gb|AC152871.14| Medicago truncatula clone mth2-83e5, complete sequence
          Length = 103622

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 171   tgaaaataagggaggaactt 190
             ||||||||||||||||||||
Sbjct: 92847 tgaaaataagggaggaactt 92866
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>gb|AY113447.1| Drosophila melanogaster RE31047 full insert cDNA
          Length = 3134

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 161  aaacgagaaatgaaaataagggag 184
            ||||||||||||||||||| ||||
Sbjct: 3041 aaacgagaaatgaaaataatggag 3064
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>gb|AF388659.1| Apis mellifera 1D-myo-inositol-trisphosphate 3-kinase (ip3k) gene,
             complete cds, alternatively spliced; and NFRKB-like
             protein gene, complete cds
          Length = 21538

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 375   ttctcaagcaggaaagaacaaaag 398
             ||||| ||||||||||||||||||
Sbjct: 18663 ttctctagcaggaaagaacaaaag 18640
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>ref|NM_080762.2| Drosophila melanogaster Casein kinase II  subunit CG15224-RB,
            transcript variant B (CkIIbeta), mRNA
          Length = 3122

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 161  aaacgagaaatgaaaataagggag 184
            ||||||||||||||||||| ||||
Sbjct: 3041 aaacgagaaatgaaaataatggag 3064
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>gb|AC010170.3| Homo sapiens 3p22-21.3 BAC RPCI11-487J21 (Roswell Park Cancer Institute
             Human BAC Library) complete sequence
          Length = 173977

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   gaacttgaagatttattcct 204
             ||||||||||||||||||||
Sbjct: 43152 gaacttgaagatttattcct 43171
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>gb|AC079385.18| Homo sapiens 12q BAC RP11-482D24 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 181609

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 68    aaggaagcttttcttgagcttctc 91
             ||||||||||||||| ||||||||
Sbjct: 30565 aaggaagcttttctttagcttctc 30542
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>gb|AC055860.13| Homo sapiens chromosome 11, clone RP11-195O23, complete sequence
          Length = 160494

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 304    tgcaaaaaacatgagccttaggat 327
              ||||||||| ||||||||||||||
Sbjct: 119930 tgcaaaaaatatgagccttaggat 119907
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>emb|AL805980.28| Mouse DNA sequence from clone RP23-49C8 on chromosome X, complete
            sequence
          Length = 172618

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 234  caacaagtaaagaaaaagctatga 257
            ||||||||||||||||||| ||||
Sbjct: 4071 caacaagtaaagaaaaagccatga 4048
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>gb|AC069394.6| Homo sapiens BAC clone RP11-731F1 from 2, complete sequence
          Length = 175352

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 174   aaataagggaggaacttgaagatt 197
             |||||| |||||||||||||||||
Sbjct: 45870 aaataatggaggaacttgaagatt 45847
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>gb|AF539527.1| Mus musculus strain C57BL/6 O-linked GlcNAc transferase gene, complete
             cds
          Length = 46067

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 234   caacaagtaaagaaaaagctatga 257
             ||||||||||||||||||| ||||
Sbjct: 36582 caacaagtaaagaaaaagccatga 36559
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>dbj|AK200108.1| Mus musculus cDNA, clone:Y1G0133G18, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000026459, based on BLAT search
          Length = 392

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 451 cagccattccaagtttctga 470
           ||||||||||||||||||||
Sbjct: 34  cagccattccaagtttctga 53
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>emb|AL590390.5| Mouse DNA sequence from clone RP23-294H14 on chromosome X, complete
             sequence
          Length = 114156

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 589   tgggtgcatttacaaaggaa 608
             ||||||||||||||||||||
Sbjct: 92025 tgggtgcatttacaaaggaa 92044
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>gb|AC005728.1|AC005728 Homo sapiens Chromosome 11p14.3 PAC clone 6-130a9 containing tryptophan
             hydroxylase gene, complete sequence
          Length = 131389

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 304   tgcaaaaaacatgagccttaggat 327
             ||||||||| ||||||||||||||
Sbjct: 77327 tgcaaaaaatatgagccttaggat 77350
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>gb|AE003487.2| Drosophila melanogaster chromosome X, section 39 of 74 of the complete
             sequence
          Length = 308317

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 161   aaacgagaaatgaaaataagggag 184
             ||||||||||||||||||| ||||
Sbjct: 88961 aaacgagaaatgaaaataatggag 88984
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>gb|AC145909.3| Gallus gallus BAC clone CH261-43H20 from chromosome unknown, complete
             sequence
          Length = 213402

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 75    cttttcttgagcttctcaag 94
             ||||||||||||||||||||
Sbjct: 79771 cttttcttgagcttctcaag 79790
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>emb|AL732450.5| Mouse DNA sequence from clone RP23-190H10 on chromosome X, complete
             sequence
          Length = 160831

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 548   tttaaattctcagagagctt 567
             ||||||||||||||||||||
Sbjct: 64976 tttaaattctcagagagctt 64957
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>emb|AL844160.4| Mouse DNA sequence from clone RP23-340N6 on chromosome 4, complete
              sequence
          Length = 207022

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 378    tcaagcaggaaagaacaaaa 397
              ||||||||||||||||||||
Sbjct: 202461 tcaagcaggaaagaacaaaa 202480


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,894,177
Number of Sequences: 3902068
Number of extensions: 7894177
Number of successful extensions: 140892
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 140656
Number of HSP's gapped (non-prelim): 227
length of query: 674
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 651
effective length of database: 17,143,297,704
effective search space: 11160286805304
effective search space used: 11160286805304
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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