>ECM17_YEAST (P47169) Sulfite reductase [NADPH] beta subunit (EC 1.8.1.2)|
            (Extracellular matrix protein 17)
          Length = 1442

 Score = 36.6 bits (83), Expect = 0.062
 Identities = 43/180 (23%), Positives = 72/180 (40%), Gaps = 17/180 (9%)
 Frame = -1

Query: 570  KDSTDRQNTLT*HTQANKS-----KQGAGGHRPLETNMQETHISKELARGLKRPPAHARS 406
            +D  DR+N LT  T+ + S     KQ AG     +   +      +L  GL  PP     
Sbjct: 627  QDFLDRENKLTLLTRKDPSLSRNLKQSAGDALTRKQEKRSKAAFDQLLEGLSGPP----- 681

Query: 405  LAGLLPDALHIILGTFALSLPHLLHLAEARVASKGYAAVYFNLDDISF*KLP-------- 250
                    LH+   +   +  +L     AR +++G  A   ++DDI   +LP        
Sbjct: 682  --------LHVYYASDGGNAANLAKRLAARASARGLKATVLSMDDIILEELPGEENVVFI 733

Query: 249  ---VGNGNFHTFSEAF-EACIHDVLIDALTHRRTAGGRCLGHSDGAHQRDQCRHGNEPRE 82
                G G F    ++F EA  +D  +D  +      G  LG S+   +++   + N+P +
Sbjct: 734  TSTAGQGEFPQDGKSFWEALKNDTDLDLASLNVAVFG--LGDSEYWPRKEDKHYFNKPSQ 791

>MYF5_COTJA (P34061) Myogenic factor 5 (Myf-5) (Myogenic factor 3) (Fragment)|
          Length = 246

 Score = 33.9 bits (76), Expect = 0.40
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -3

Query: 376 HYPGHFCSEPSTPSSSCRGTSG 311
           H PG  CSEP++PSSSC    G
Sbjct: 137 HLPGQSCSEPTSPSSSCSDAMG 158

>CI094_HUMAN (Q496M8) Protein C9orf94 precursor|
          Length = 467

 Score = 33.1 bits (74), Expect = 0.69
 Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
 Frame = +2

Query: 341 CGRLRAK-----VPRIMCNASGRRPASERACAGGLFRPLASSLDMCVSCMFVSSGRCPPA 505
           C +L+A      V   MC    +RP   +AC          +  +CV   F S G+C   
Sbjct: 277 CQKLKASGISTPVSNDMCTQVAKRPVDTQAC----------NQQLCVEWAFSSWGQC-NG 325

Query: 506 PCLLLFACVCHVSVFCRS 559
           PC+     V H  VFC++
Sbjct: 326 PCIGPHLAVQHRQVFCQT 343

>MYF5_CHICK (Q08856) Myogenic factor 5 (Myf-5)|
          Length = 258

 Score = 32.7 bits (73), Expect = 0.90
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -3

Query: 376 HYPGHFCSEPSTPSSSC 326
           H PG  CSEP++PSSSC
Sbjct: 149 HLPGQSCSEPTSPSSSC 165

>WD21A_HUMAN (Q8WV16) WD-repeat protein 21A|
          Length = 495

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
 Frame = -3

Query: 508 RSRWTSTA*NKHARNTHIQGTS*RSEETS-RARTLTSRPSP*RIAHYPGHFCSEPSTPSS 332
           +SRW S    +H R +H Q    R  ++  R+ +  ++P     AH  GH   E  + SS
Sbjct: 3   KSRWQSR--RRHGRRSHQQNPWFRLRDSEDRSDSRAAQP-----AHDSGHGDDESPSTSS 55

Query: 331 SCRGTSGLQRLRSSLF*P 278
              GTS +  L    F P
Sbjct: 56  GTAGTSSVPELPGFYFDP 73

>TANK_MOUSE (P70347) TRAF family member-associated NF-kappa-B activator|
           (TRAF-interacting protein) (I-TRAF)
          Length = 448

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = -1

Query: 570 KDSTDRQNTLT*HTQANKSKQGAGGHRPLETNMQETHISKELARGLKRPPAHAR 409
           +DS  R+N LT     +K K G    +  +   QE    KE A+GL  P  H R
Sbjct: 115 EDSDRRKNNLTLDEPHDKVKLGTLRDKQSKVRRQEVSSGKESAKGLNIPLHHER 168

>TRPB_RHIME (Q92TC9) Tryptophan synthase beta chain (EC 4.2.1.20)|
          Length = 406

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 18/62 (29%), Positives = 27/62 (43%)
 Frame = -1

Query: 369 LGTFALSLPHLLHLAEARVASKGYAAVYFNLDDISF*KLPVGNGNFHTFSEAFEACIHDV 190
           LGT  +  P  L+ AE   A  G A +YF  ++++           HT S     CI  +
Sbjct: 59  LGTHYIGRPSPLYFAERLTAELGGAKIYFKREELN-----------HTGSHKINNCIGQI 107

Query: 189 LI 184
           L+
Sbjct: 108 LL 109

>NOTC3_HUMAN (Q9UM47) Neurogenic locus notch homolog protein 3 precursor (Notch 3)|
            [Contains: Notch 3 extracellular truncation; Notch 3
            intracellular domain]
          Length = 2321

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 22/76 (28%), Positives = 27/76 (35%), Gaps = 9/76 (11%)
 Frame = +2

Query: 335  RRCGRLRAKVPRIMCNASGRRPASERACAGGLFRPLASSLD---------MCVSCMFVSS 487
            R C  L+  V  + C  + R P    AC  GL  P   S            C +   +  
Sbjct: 1291 RSCRELQCPVG-VPCQQTPRGPRC--ACPPGLSGPSCRSFPGSPPGASNASCAAAPCLHG 1347

Query: 488  GRCPPAPCLLLFACVC 535
            G C PAP    F C C
Sbjct: 1348 GSCRPAPLAPFFRCAC 1363


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,895,496
Number of Sequences: 219361
Number of extensions: 1805598
Number of successful extensions: 4900
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4900
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5767334219
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)