>IF6_BETVU (O81920) Eukaryotic translation initiation factor 6 (eIF-6)|
           (Fragment)
          Length = 193

 Score =  281 bits (719), Expect = 1e-75
 Identities = 138/160 (86%), Positives = 148/160 (92%)
 Frame = +2

Query: 119 MATRIQFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIG 298
           MATR+QFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFE+ELAD IPVVKTSI GTRIIG
Sbjct: 1   MATRLQFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFETELADYIPVVKTSIAGTRIIG 60

Query: 299 RLCVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPD 478
                NKNGLL+PHTTTDQELQHLRNC+PD VVVQRI+E+LSALGNCI+CND+VALTH D
Sbjct: 61  PNVCRNKNGLLVPHTTTDQELQHLRNCLPDSVVVQRIEEKLSALGNCIACNDYVALTHTD 120

Query: 479 LDKATEELIADVLGVEVFRQTIAGNILVGSYCAFSNRGGL 598
           LDK TEELIADVLGVEVF QTIAGNILVGSYCA +N+GGL
Sbjct: 121 LDKETEELIADVLGVEVFGQTIAGNILVGSYCAITNKGGL 160

>IF6_YEAST (Q12522) Eukaryotic translation initiation factor 6 (eIF-6)|
          Length = 245

 Score =  251 bits (642), Expect = 9e-67
 Identities = 119/160 (74%), Positives = 139/160 (86%)
 Frame = +2

Query: 119 MATRIQFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIG 298
           MATR QFEN+ E+GVFSKLTN YCLVA+GGSENFYS FE+EL D IP+V T+I GTRIIG
Sbjct: 1   MATRTQFENSNEIGVFSKLTNTYCLVAVGGSENFYSAFEAELGDAIPIVHTTIAGTRIIG 60

Query: 299 RLCVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPD 478
           R+  GN+ GLL+P  TTDQELQHLRN +PD V +QR++ERLSALGN I CND+VAL HPD
Sbjct: 61  RMTAGNRRGLLVPTQTTDQELQHLRNSLPDSVKIQRVEERLSALGNVICCNDYVALVHPD 120

Query: 479 LDKATEELIADVLGVEVFRQTIAGNILVGSYCAFSNRGGL 598
           +D+ TEELI+DVLGVEVFRQTI+GNILVGSYC+ SN+GGL
Sbjct: 121 IDRETEELISDVLGVEVFRQTISGNILVGSYCSLSNQGGL 160

>IF6_MOUSE (O55135) Eukaryotic translation initiation factor 6 (eIF-6) (B4|
           integrin interactor) (CAB) (p27(BBP))
          Length = 245

 Score =  249 bits (636), Expect = 4e-66
 Identities = 116/160 (72%), Positives = 137/160 (85%)
 Frame = +2

Query: 119 MATRIQFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIG 298
           MA R  FENNCEVG F+KLTNAYCLVAIGGSENFYS FE EL+D IPVV  SI G RIIG
Sbjct: 1   MAVRASFENNCEVGCFAKLTNAYCLVAIGGSENFYSVFEGELSDAIPVVHASIAGCRIIG 60

Query: 299 RLCVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPD 478
           R+CVGN++GLL+P+ TTDQELQH+RN +PD V ++R++ERLSALGN  +CND+VAL HPD
Sbjct: 61  RMCVGNRHGLLVPNNTTDQELQHIRNSLPDSVQIRRVEERLSALGNVTTCNDYVALVHPD 120

Query: 479 LDKATEELIADVLGVEVFRQTIAGNILVGSYCAFSNRGGL 598
           LD+ TEE++ADVL VEVFRQT+A  +LVGSYC FSN+GGL
Sbjct: 121 LDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGL 160

>IF6_HUMAN (P56537) Eukaryotic translation initiation factor 6 (eIF-6) (B4|
           integrin interactor) (CAB) (p27(BBP)) (B(2)GCN homolog)
          Length = 245

 Score =  247 bits (630), Expect = 2e-65
 Identities = 114/160 (71%), Positives = 136/160 (85%)
 Frame = +2

Query: 119 MATRIQFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIG 298
           MA R  FENNCE+G F+KLTN YCLVAIGGSENFYS FE EL+D IPVV  SI G RIIG
Sbjct: 1   MAVRASFENNCEIGCFAKLTNTYCLVAIGGSENFYSVFEGELSDTIPVVHASIAGCRIIG 60

Query: 299 RLCVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPD 478
           R+CVGN++GLL+P+ TTDQELQH+RN +PD V ++R++ERLSALGN  +CND+VAL HPD
Sbjct: 61  RMCVGNRHGLLVPNNTTDQELQHIRNSLPDTVQIRRVEERLSALGNVTTCNDYVALVHPD 120

Query: 479 LDKATEELIADVLGVEVFRQTIAGNILVGSYCAFSNRGGL 598
           LD+ TEE++ADVL VEVFRQT+A  +LVGSYC FSN+GGL
Sbjct: 121 LDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGL 160

>IF6_SCHPO (O94476) Eukaryotic translation initiation factor 6 (eIF-6)|
          Length = 244

 Score =  243 bits (619), Expect = 4e-64
 Identities = 114/160 (71%), Positives = 137/160 (85%)
 Frame = +2

Query: 119 MATRIQFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIG 298
           MA R QFEN+ E+GVFS LTN+Y LVA+GGSENFYS FE+EL DV+PVV T+IGGTRIIG
Sbjct: 1   MALRAQFENSNEIGVFSNLTNSYALVALGGSENFYSVFEAELGDVVPVVHTTIGGTRIIG 60

Query: 299 RLCVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPD 478
           RL  GN+ GLL+P +TTD ELQHLRN +PD V +QR+DERLSALGN ++CND+VAL HPD
Sbjct: 61  RLTCGNRKGLLVPSSTTDNELQHLRNSLPDPVKIQRVDERLSALGNIVACNDYVALVHPD 120

Query: 479 LDKATEELIADVLGVEVFRQTIAGNILVGSYCAFSNRGGL 598
           +++ TEE+IADVL VEVFRQT+AGN+L GSYCA SN+G L
Sbjct: 121 IERETEEIIADVLDVEVFRQTVAGNVLTGSYCALSNQGAL 160

>IF6_DROME (P56538) Probable eukaryotic translation initiation factor 6|
           (eIF-6)
          Length = 245

 Score =  241 bits (614), Expect = 2e-63
 Identities = 115/160 (71%), Positives = 136/160 (85%)
 Frame = +2

Query: 119 MATRIQFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIG 298
           MA R+QFENN ++GVF+KLTN YCLVAIGGSE FYS FE+EL D IPVV  ++GG RIIG
Sbjct: 1   MALRVQFENNDDIGVFTKLTNTYCLVAIGGSETFYSAFEAELGDTIPVVHANVGGCRIIG 60

Query: 299 RLCVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPD 478
           RL VGN+NGLL+P++TTD+ELQHLRN +PD V + R++ERLSALGN I+CND+VAL HPD
Sbjct: 61  RLTVGNRNGLLVPNSTTDEELQHLRNSLPDAVKIYRVEERLSALGNVIACNDYVALVHPD 120

Query: 479 LDKATEELIADVLGVEVFRQTIAGNILVGSYCAFSNRGGL 598
           LDK TEE+IADVL VEVFRQTIA N LVGSY   SN+GG+
Sbjct: 121 LDKETEEIIADVLKVEVFRQTIADNSLVGSYAVLSNQGGM 160

>IF6_ARATH (O22290) Eukaryotic translation initiation factor 6 (eIF-6)|
          Length = 247

 Score =  229 bits (583), Expect = 6e-60
 Identities = 113/162 (69%), Positives = 136/162 (83%), Gaps = 2/162 (1%)
 Frame = +2

Query: 119 MATRIQFENN-CEVGVFSKLTNAYCLV-AIGGSENFYSTFESELADVIPVVKTSIGGTRI 292
           MATR+Q++NN CE+GVFSKLTNAYCLV A   S NF++ +ES+L  VIP+V TSIGG+  
Sbjct: 1   MATRLQYDNNNCEIGVFSKLTNAYCLVSATSASANFFTGYESKLKGVIPIVTTSIGGSGT 60

Query: 293 IGRLCVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTH 472
           IG LCVGNKNGLLL HT TDQELQHLR+ +PD+VVVQRI+E + ALGN I+CND+VAL H
Sbjct: 61  IGSLCVGNKNGLLLSHTITDQELQHLRDSLPDEVVVQRIEEPICALGNAIACNDYVALVH 120

Query: 473 PDLDKATEELIADVLGVEVFRQTIAGNILVGSYCAFSNRGGL 598
           P L+K TEE+I+DVLGVEV+RQTIA N LVGSYC+ SN GG+
Sbjct: 121 PKLEKDTEEIISDVLGVEVYRQTIANNELVGSYCSLSNNGGM 162

>IF6_CAEEL (O62106) Eukaryotic translation initiation factor 6 (eIF-6)|
          Length = 246

 Score =  209 bits (532), Expect = 5e-54
 Identities = 97/160 (60%), Positives = 128/160 (80%)
 Frame = +2

Query: 119 MATRIQFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIG 298
           MA R+ +E + +VGVF  LTN+YCLV +GG++NFYS  E+EL+D+IPVV TSI  TRI+G
Sbjct: 1   MALRVDYEGSNDVGVFCTLTNSYCLVGVGGTQNFYSILEAELSDLIPVVHTSIASTRIVG 60

Query: 299 RLCVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPD 478
           RL VGN++GLL+P+ TTDQELQHLRN +PD+V ++R+DERLSALGN I+CNDHVA+ H +
Sbjct: 61  RLTVGNRHGLLVPNATTDQELQHLRNSLPDEVAIRRVDERLSALGNVIACNDHVAIVHAE 120

Query: 479 LDKATEELIADVLGVEVFRQTIAGNILVGSYCAFSNRGGL 598
           +   TE+ + +VL VEVFR ++A N LVGSYC  S+ G L
Sbjct: 121 ISAETEQALVEVLKVEVFRVSLAQNSLVGSYCILSSNGCL 160

>IF6_PYRHO (O58264) Translation initiation factor 6 (aIF-6)|
          Length = 227

 Score = 87.0 bits (214), Expect = 4e-17
 Identities = 53/160 (33%), Positives = 81/160 (50%), Gaps = 3/160 (1%)
 Frame = +2

Query: 128 RIQFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIGRLC 307
           R+ FEN+  +GVF   T+   L+  G  E         L   +PV++ S+  +RIIG L 
Sbjct: 5   RLDFENSPYLGVFGVATDRVVLIREGLQEKKLEVIRETLK--VPVIEVSVMKSRIIGTLA 62

Query: 308 VGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRI---DERLSALGNCISCNDHVALTHPD 478
            GN N ++LP    D E++ ++  + +  +   +     + +ALGN I  ND  AL    
Sbjct: 63  TGNSNAIILPWYVWDAEIERIKKALSEYGIDMEVVPFRSKYTALGNLILTNDKAALVSAK 122

Query: 479 LDKATEELIADVLGVEVFRQTIAGNILVGSYCAFSNRGGL 598
             +   + I ++LGVEV R  IAG   VGS    +N+GGL
Sbjct: 123 FSRKEAQEIGEILGVEVERGVIAGLHAVGSAGVVTNKGGL 162



 Score = 30.0 bits (66), Expect = 5.3
 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
 Frame = +2

Query: 254 IPVVKTSIGGTRIIGRL-CVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDERLSAL 430
           + V +  I G   +G    V NK GL+ P T+ D+EL+ L +     V V   +  +  +
Sbjct: 137 VEVERGVIAGLHAVGSAGVVTNKGGLVHPETS-DEELEWLSDLFKVDVYVGTANMGVPYV 195

Query: 431 GNCISCNDHVAL-----THPDLDKATEEL 502
           G C+  N +  +     T P++ K  E L
Sbjct: 196 GTCMLANSNGVVVGHLTTGPEIVKIEEAL 224

>IF6_PYRFU (Q8U3S8) Translation initiation factor 6 (aIF-6)|
          Length = 227

 Score = 87.0 bits (214), Expect = 4e-17
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 3/160 (1%)
 Frame = +2

Query: 128 RIQFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIGRLC 307
           ++ FEN+  +GVF   T+   L+  G  E         L   +PVV+ S+  +RIIG L 
Sbjct: 5   KLDFENSPYLGVFGIATDKVVLIREGLQEKKLEVIREVLK--VPVVEASLMKSRIIGVLG 62

Query: 308 VGNKNGLLLPHTTTDQELQHLRNCIPDQVV---VQRIDERLSALGNCISCNDHVALTHPD 478
            GN N +++P    D EL+ ++N   +  +   V     + +ALGN I  ND  AL    
Sbjct: 63  AGNSNAIIVPWYVWDSELEKIKNAFREYGIDTEVVPFQTKYTALGNLILTNDKGALVSSK 122

Query: 479 LDKATEELIADVLGVEVFRQTIAGNILVGSYCAFSNRGGL 598
             +   + I D+LGVEV R  IAG + VGS    +N+GGL
Sbjct: 123 FSREEAKKIGDILGVEVERGVIAGIVAVGSAGVVTNKGGL 162



 Score = 29.6 bits (65), Expect = 6.9
 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 8/106 (7%)
 Frame = +2

Query: 209 SENFYSTFESELADV--IPVVKTSIGGTRIIGRL-CVGNKNGLLLPHTTTDQELQHLRNC 379
           S  F      ++ D+  + V +  I G   +G    V NK GL+ P  T D+EL+ L + 
Sbjct: 120 SSKFSREEAKKIGDILGVEVERGVIAGIVAVGSAGVVTNKGGLVHPEAT-DEELEWLSDL 178

Query: 380 IPDQVVVQRIDERLSALGNCISCNDHVAL-----THPDLDKATEEL 502
               V V   +  +  +G+C+  N +  +     T P++ K  E L
Sbjct: 179 FKVDVYVGTANMGVPYVGSCMLANSYGVVVGHLTTGPEIVKIEEAL 224

>IF6_PYRAB (Q9UYI6) Translation initiation factor 6 (aIF-6)|
          Length = 227

 Score = 87.0 bits (214), Expect = 4e-17
 Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 3/160 (1%)
 Frame = +2

Query: 128 RIQFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIGRLC 307
           R+ FEN+  +GVF   T+   LV  G  E         L   +PV++ SI  +RIIG L 
Sbjct: 5   RLDFENSPYLGVFGVATDRVVLVREGLQEKKLEVIREVLK--VPVIEASIMKSRIIGTLA 62

Query: 308 VGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRI---DERLSALGNCISCNDHVALTHPD 478
            GN N +L+P    D E++ +++   +  +   I     + +ALGN I  ND  AL    
Sbjct: 63  TGNSNAILVPWYVWDTEIERIKSAFKEYGIETEIVPFRTKYTALGNLILTNDKAALVSAK 122

Query: 479 LDKATEELIADVLGVEVFRQTIAGNILVGSYCAFSNRGGL 598
             +   + I D+LGVEV R  IAG   VGS    +N+GGL
Sbjct: 123 FSRDEAKEIGDILGVEVERGLIAGLHAVGSAGVVTNKGGL 162



 Score = 29.3 bits (64), Expect = 9.1
 Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 8/106 (7%)
 Frame = +2

Query: 209 SENFYSTFESELADV--IPVVKTSIGGTRIIGRL-CVGNKNGLLLPHTTTDQELQHLRNC 379
           S  F      E+ D+  + V +  I G   +G    V NK GL+ P  + D+EL+ L   
Sbjct: 120 SAKFSRDEAKEIGDILGVEVERGLIAGLHAVGSAGVVTNKGGLVHPEAS-DEELEWLSEL 178

Query: 380 IPDQVVVQRIDERLSALGNCISCNDHVAL-----THPDLDKATEEL 502
               V V   +  +  +G C+  N +  +     T P++ K  E L
Sbjct: 179 FKVDVYVGTANMGVPYVGTCMLANSNGVVVGHLTTGPEIVKIEEAL 224

>IF6_METTH (O27648) Translation initiation factor 6 (aIF-6)|
          Length = 222

 Score = 86.7 bits (213), Expect = 5e-17
 Identities = 56/160 (35%), Positives = 83/160 (51%)
 Frame = +2

Query: 119 MATRIQFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIG 298
           M  RI    N  +GV+  +T++  L+     E F       L   + V+K SI G+ + G
Sbjct: 1   MIRRINLSGNPNLGVYISVTDSVALIPQNTPEKFEGVLREALE--VEVLKVSISGSSLNG 58

Query: 299 RLCVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPD 478
            L VGN NG ++ +   D+E+  L     + V   RI ER +A+GN +  ND+ A+  P 
Sbjct: 59  ALAVGNSNGFVVSNQAMDREIDALAAAGVEAV---RIPERFTAVGNLVLANDNGAVASPL 115

Query: 479 LDKATEELIADVLGVEVFRQTIAGNILVGSYCAFSNRGGL 598
           L     ++I DVL V+V   T+AG  +VGS  A +NRG L
Sbjct: 116 LSDDALQVIGDVLEVDVKVSTLAGLNIVGSMGAATNRGAL 155

>IF6_AERPE (Q9YD27) Translation initiation factor 6 (aIF-6)|
          Length = 233

 Score = 84.0 bits (206), Expect = 3e-16
 Identities = 53/158 (33%), Positives = 82/158 (51%), Gaps = 1/158 (0%)
 Frame = +2

Query: 128 RIQFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIP-VVKTSIGGTRIIGRL 304
           ++    N  +GV+   +++Y L       +   T    L   +  VV+  + G R++G L
Sbjct: 11  KLSLYGNPNIGVYLTASDSYVLAPDDIGADDVRTISEVLGVAMERVVRLRVLGMRLVGVL 70

Query: 305 CVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPDLD 484
             GN  G+LLP    D+E++ +R  + + V V  +  R +ALGN I CND   L  P L+
Sbjct: 71  TTGNSRGILLPEGV-DREVELVRKAL-EGVEVGIVPTRSNALGNVIVCNDRACLASPGLE 128

Query: 485 KATEELIADVLGVEVFRQTIAGNILVGSYCAFSNRGGL 598
           K   + ++D LGVEV   ++AG   VGS    +NRGGL
Sbjct: 129 KEALKTVSDTLGVEVVEGSVAGVYTVGSAIVVTNRGGL 166

>IF6_METMA (Q8PYQ3) Translation initiation factor 6 (aIF-6)|
          Length = 219

 Score = 82.8 bits (203), Expect = 7e-16
 Identities = 54/146 (36%), Positives = 79/146 (54%)
 Frame = +2

Query: 155 VGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIGRLCVGNKNGLLL 334
           +GVF+  T    LV         +  E  L   + VV+T I G+ ++G L  GN NG LL
Sbjct: 13  IGVFATCTEDLALVPPLTKPEVCTILEEALD--VRVVETLINGSTVVGALSRGNSNGFLL 70

Query: 335 PHTTTDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPDLDKATEELIADV 514
           P+ ++ +E+Q  R  +P  +    + +RL+A+GN +  ND  AL HP+L     E+IA  
Sbjct: 71  PYGSSVEEMQK-RTGVPAGI----LPDRLNAVGNIVLANDSAALVHPELSDRALEIIART 125

Query: 515 LGVEVFRQTIAGNILVGSYCAFSNRG 592
           L VEV+R TIAG   VG     +N+G
Sbjct: 126 LKVEVYRGTIAGIKNVGMAGVVTNKG 151

>IF6_PYRKO (Q5JGT4) Translation initiation factor 6 (aIF-6)|
          Length = 229

 Score = 81.3 bits (199), Expect = 2e-15
 Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 4/161 (2%)
 Frame = +2

Query: 128 RIQFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIGRLC 307
           R+ FEN+  +GV+ + T+   L+  G  E         L   +P+++TSI  +RI+G   
Sbjct: 5   RLDFENSPYLGVYGRATDRVLLLREGLGEKKLEVLREVLK--VPIIETSIMKSRIVGIFA 62

Query: 308 VGNKNGLLLPHTTTDQELQHLRNCIPD---QVVVQRIDERLSALGNCISCNDHVALTHPD 478
            GN N +++P    D EL+ ++  + +    + V     RL+ALGN I  ND  AL   +
Sbjct: 63  AGNSNAIIVPWYIWDAELERIKTALNEFGIDMDVVPFKSRLTALGNLILTNDKAALVSKE 122

Query: 479 LDKATEELIADVLGV-EVFRQTIAGNILVGSYCAFSNRGGL 598
             +     I ++LGV EV R  IA    VGS    +N+GGL
Sbjct: 123 FTREEANAIGEILGVDEVERGMIASYRSVGSVGVVTNKGGL 163



 Score = 30.8 bits (68), Expect = 3.1
 Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
 Frame = +2

Query: 239 ELADVIPVVKTSIGGTRIIGRL-CVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDE 415
           E+  V  V +  I   R +G +  V NK GL+ P  T D+EL+ L +     + V   + 
Sbjct: 133 EILGVDEVERGMIASYRSVGSVGVVTNKGGLVHPEAT-DEELEWLSDLFGVDIYVGTANM 191

Query: 416 RLSALGNCISCNDHVAL-----THPDLDKATEEL 502
            +  +G+C+  N +  +     T P++ K  E L
Sbjct: 192 GVPFVGSCMLANSYGVVVGHLTTGPEIVKIEEAL 225

>IF6_SULSO (Q980G0) Translation initiation factor 6 (aIF-6)|
          Length = 223

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 49/151 (32%), Positives = 83/151 (54%), Gaps = 3/151 (1%)
 Frame = +2

Query: 155 VGVFSKLTNAYCLVAIGGSENFYSTFESELADVI--PVVKTSIGGTRIIGRLCVGNKNGL 328
           +GV+    N Y ++  G      S  +  +A V+   +++  I  + ++G    GN NG+
Sbjct: 14  IGVYIYTNNKYTIIPRG----LDSETKENIAQVLGTELLEAEISRSFLLGIFISGNDNGI 69

Query: 329 LLPHTTTDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPDLDKATEELIA 508
           LLP +T D E + L+  + D   V+ ++ +++ALGN I  N+  AL +P+ +   E++I 
Sbjct: 70  LLPKSTIDDEFRFLKENLRD-CRVEILNSKVTALGNTILANNKAALIYPEFNDIEEKIIK 128

Query: 509 DVLGVE-VFRQTIAGNILVGSYCAFSNRGGL 598
           + LGVE + R  IA  I VGS    +N+GGL
Sbjct: 129 ETLGVEDIKRGKIAQMITVGSVGVITNKGGL 159

>IF6_METAC (Q8TIN4) Translation initiation factor 6 (aIF-6)|
          Length = 218

 Score = 73.9 bits (180), Expect = 3e-13
 Identities = 52/146 (35%), Positives = 76/146 (52%)
 Frame = +2

Query: 155 VGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIGRLCVGNKNGLLL 334
           +GVF+  T    LV         +  E E+ DV  V++T + G+ ++G L  GN NG +L
Sbjct: 13  IGVFATCTEDVVLVPPLTKPEVCALLE-EVLDV-RVIETLVNGSIVVGALSRGNSNGFML 70

Query: 335 PHTTTDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPDLDKATEELIADV 514
           P+     E+Q   +     + V  + +RL+A+GN +  ND  AL HPDL     E IA  
Sbjct: 71  PYGAR-AEMQRFTD-----IPVGILPDRLNAVGNIVFANDSAALVHPDLSDKALEAIART 124

Query: 515 LGVEVFRQTIAGNILVGSYCAFSNRG 592
           L V+V+R TIAG   VG     +N+G
Sbjct: 125 LKVDVYRGTIAGIKNVGMAGVVTNKG 150

>IF6_METKA (Q8TUY5) Translation initiation factor 6 (aIF-6)|
          Length = 221

 Score = 73.9 bits (180), Expect = 3e-13
 Identities = 45/148 (30%), Positives = 75/148 (50%)
 Frame = +2

Query: 155 VGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIGRLCVGNKNGLLL 334
           +G +   +  Y +VA    ++     +  L   + VV+T++ G+ ++G L   N NG L 
Sbjct: 14  IGAWIAASEEYAVVAPKVPDDIVERVKEALD--VEVVRTTVAGSNLVGALLAVNSNGALF 71

Query: 335 PHTTTDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPDLDKATEELIADV 514
           P    + E++ +R      V V  +  +++A+GN +  NDH AL HPDLD    E+I  V
Sbjct: 72  PRHAREHEIRVVREL---GVEVDVLPSKMNAVGNLVLTNDHGALVHPDLDDHALEVIESV 128

Query: 515 LGVEVFRQTIAGNILVGSYCAFSNRGGL 598
           LG  V R  + G   VGS    +++G +
Sbjct: 129 LGGRVVRGELGGVKTVGSAGVANSKGAV 156

>IF6_METJA (Q60357) Translation initiation factor 6 (aIF-6)|
          Length = 228

 Score = 73.2 bits (178), Expect = 5e-13
 Identities = 58/166 (34%), Positives = 88/166 (53%), Gaps = 5/166 (3%)
 Frame = +2

Query: 116 TMATRIQFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPV--VKTSIGGTR 289
           TM  R  F     +GV +  T    L+ I   ++  +    E+++V+    ++T+IGG+ 
Sbjct: 2   TMIIRKYFSGIPTIGVLALTTEEITLLPIFLDKDDVN----EVSEVLETKCLQTNIGGSS 57

Query: 290 IIGRLCVGNKNGLLLPHTTTDQELQHLRNCIPD---QVVVQRIDERLSALGNCISCNDHV 460
           ++G L V NK GLLLP    D+EL  ++N + +    + V+ I  + +ALGN I  ND  
Sbjct: 58  LVGSLSVANKYGLLLPKIVEDEELDRIKNFLKENNLDLNVEIIKSKNTALGNLILTNDKG 117

Query: 461 ALTHPDLDKATEELIADVLGVEVFRQTIAGNILVGSYCAFSNRGGL 598
           AL  P+L K  ++ I D L VEV   TIA    VGS    +N+G L
Sbjct: 118 ALISPEL-KDFKKDIEDSLNVEVEIGTIAELPTVGSNAVVTNKGCL 162

>IF6_PICTO (Q6L2L0) Translation initiation factor 6 (aIF-6)|
          Length = 217

 Score = 72.4 bits (176), Expect = 9e-13
 Identities = 49/160 (30%), Positives = 80/160 (50%)
 Frame = +2

Query: 119 MATRIQFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIG 298
           M  ++   N+  +GV+++  N    + +  S+     FE  L     V K SIG + +IG
Sbjct: 1   MIKKVSILNSNFIGVYARTWNDVTFLPVNISDEEKRIFEETLKT--EVYKISIGNSFLIG 58

Query: 299 RLCVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPD 478
            +   N NG+++     D  + +L++   +   +  I+ +L+A GN I  NDH AL H  
Sbjct: 59  SMLSMNSNGIVV----ADHGIDNLKSLNINGRNILSINNKLNAAGNNIIANDHAALIHKS 114

Query: 479 LDKATEELIADVLGVEVFRQTIAGNILVGSYCAFSNRGGL 598
              +  + I DVLGVE  + +IAG   VGS    ++RG L
Sbjct: 115 FPDSIRKKIEDVLGVETVKGSIAGIKTVGSVAVLNDRGML 154

>IF6_THEAC (Q9HM16) Translation initiation factor 6 (aIF-6)|
          Length = 216

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 43/148 (29%), Positives = 76/148 (51%)
 Frame = +2

Query: 155 VGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIGRLCVGNKNGLLL 334
           +G+++K  +    + +   E   + F+  L   + V + SI  + +IG + V N NGL++
Sbjct: 13  IGIYAKAWDDVAFITMMADEKTVADFQEVLQ--VDVRRISIDNSSLIGTMMVMNSNGLIV 70

Query: 335 PHTTTDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPDLDKATEELIADV 514
           P+ +    L  L     D   V ++ ++++A+GN I  NDH A+ H +    + + I D 
Sbjct: 71  PYGSEITGLGDL-----DGRNVLQLKDKINAIGNDIIANDHGAIIHKNFSNRSRKEIEDT 125

Query: 515 LGVEVFRQTIAGNILVGSYCAFSNRGGL 598
           LGVE  R TI   + VGS    +++G L
Sbjct: 126 LGVETIRTTIGNILTVGSAGILTSKGML 153

>IF6_PYRAE (Q8ZTU1) Translation initiation factor 6 (aIF-6)|
          Length = 220

 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 46/156 (29%), Positives = 76/156 (48%)
 Frame = +2

Query: 125 TRIQFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIGRL 304
           T I+      +GVF    N    +     E       + L     V + ++  + ++G  
Sbjct: 5   TPIRVFGTSSIGVFIATNNTVTFIPPDVPEKIDDAVRNTLRT--SVARFTVARSPLLGIF 62

Query: 305 CVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPDLD 484
            V N NG+LLP    ++E++  +      + V  I+ + +A+ N I   + VAL  P L+
Sbjct: 63  TVVNDNGVLLPPLVLEEEVRLFKAL---GLNVDIINTKYTAISNLILAGNKVALVSPLLE 119

Query: 485 KATEELIADVLGVEVFRQTIAGNILVGSYCAFSNRG 592
            +  +++ADVLGVEV   TIAGN LVG+    ++RG
Sbjct: 120 PSARKVVADVLGVEVIVDTIAGNPLVGALAVLNSRG 155



 Score = 37.4 bits (85), Expect = 0.033
 Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
 Frame = +2

Query: 242 LADV--IPVVKTSIGGTRIIGRLCVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDE 415
           +ADV  + V+  +I G  ++G L V N  GLL+    TD +L+ L      +V V  ++ 
Sbjct: 126 VADVLGVEVIVDTIAGNPLVGALAVLNSRGLLVAPEATDDDLKKLSEYFKVRVDVGTVNR 185

Query: 416 RLSALGNCISCNDHVAL 466
             S L   I  ND+ AL
Sbjct: 186 GKSFLRGGIVVNDNGAL 202



 Score = 31.2 bits (69), Expect = 2.4
 Identities = 16/59 (27%), Positives = 32/59 (54%)
 Frame = +2

Query: 422 SALGNCISCNDHVALTHPDLDKATEELIADVLGVEVFRQTIAGNILVGSYCAFSNRGGL 598
           S++G  I+ N+ V    PD+ +  ++ + + L   V R T+A + L+G +   ++ G L
Sbjct: 13  SSIGVFIATNNTVTFIPPDVPEKIDDAVRNTLRTSVARFTVARSPLLGIFTVVNDNGVL 71

>IF6_ARCFU (O28214) Translation initiation factor 6 (aIF-6)|
          Length = 215

 Score = 65.9 bits (159), Expect = 9e-11
 Identities = 37/157 (23%), Positives = 76/157 (48%)
 Frame = +2

Query: 128 RIQFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIGRLC 307
           ++    N  +G+++K++  Y +V +   E      + +L   + V+ T I G+ ++G + 
Sbjct: 2   KVAVNGNPLIGLYAKVSEEYAVVGVN-HEPLIDAIQEKLD--VDVIVTKIAGSELVGAMM 58

Query: 308 VGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPDLDK 487
             N  G ++       EL+ L   +   V    I+  ++  GN +  ND   + +P+++ 
Sbjct: 59  ALNSRGAVVSDQVLSSELRELEKSLDVLV----IETPMTCFGNNLLINDRGGIANPEMES 114

Query: 488 ATEELIADVLGVEVFRQTIAGNILVGSYCAFSNRGGL 598
           +  E +AD + +E+ + T+ G   VG     +NRGGL
Sbjct: 115 SVVEKVADFMDIELVKGTVGGIKTVGMAAVVTNRGGL 151

>IF6_THEVO (Q97CU0) Translation initiation factor 6 (aIF-6)|
          Length = 218

 Score = 63.9 bits (154), Expect = 3e-10
 Identities = 40/148 (27%), Positives = 71/148 (47%)
 Frame = +2

Query: 155 VGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIGRLCVGNKNGLLL 334
           +G+++K  +    +     E   + F   L   + + + SI G+ +IG +   N NG++L
Sbjct: 15  IGIYAKAWDDVAFITKMADEKTVNEFREVLQ--VDIKRISIDGSTLIGTMIAVNSNGIVL 72

Query: 335 PHTTTDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPDLDKATEELIADV 514
           P+ +    L  +     D   V  + ++++A+GN I  NDH A+ H        + I D 
Sbjct: 73  PYGSNIDGLDGI-----DGRNVLYLKDKINAVGNDIIANDHGAIIHKAFSNKARKEIEDT 127

Query: 515 LGVEVFRQTIAGNILVGSYCAFSNRGGL 598
           LGVE  R +I   + VGS    +++G L
Sbjct: 128 LGVETIRTSIGNILTVGSASVLTSKGML 155



 Score = 30.4 bits (67), Expect = 4.1
 Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 2/102 (1%)
 Frame = +2

Query: 218 FYSTFESELADVIPV--VKTSIGGTRIIGRLCVGNKNGLLLPHTTTDQELQHLRNCIPDQ 391
           F +    E+ D + V  ++TSIG    +G   V    G+L+   T D EL+ L++     
Sbjct: 116 FSNKARKEIEDTLGVETIRTSIGNILTVGSASVLTSKGMLVNPETDDDELEFLKDFFKVS 175

Query: 392 VVVQRIDERLSALGNCISCNDHVALTHPDLDKATEELIADVL 517
           V     +     +G  I  N    L   D      + I DVL
Sbjct: 176 VKSGTANFGSIYVGASIVANSKGILVGRDTTPIEIDRIDDVL 217

>IF6_SULTO (Q971I4) Translation initiation factor 6 (aIF-6)|
          Length = 223

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 43/153 (28%), Positives = 81/153 (52%), Gaps = 5/153 (3%)
 Frame = +2

Query: 155 VGVFSKLTNAYCLVA----IGGSENFYSTFESELADVIPVVKTSIGGTRIIGRLCVGNKN 322
           +G++    + Y +V     +   +    TF++E      +++T+I  + +IG    GN N
Sbjct: 14  IGIYIFTNDKYTIVPKNLDVETIQKIQETFKTE------IIQTTIAKSFLIGIFVAGNNN 67

Query: 323 GLLLPHTTTDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPDLDKATEEL 502
            +LLP    D+E++ +++   D V V+ +D R +ALGN I  N + AL +P+L     + 
Sbjct: 68  VILLPRNVDDEEVKKIKDIARD-VRVEILDIRPTALGNIILTNSYGALIYPELSSIEFKK 126

Query: 503 IADVLGVE-VFRQTIAGNILVGSYCAFSNRGGL 598
           I + L ++ + + +IA  I VGS    +++ GL
Sbjct: 127 IKESLQIDNIEKGSIANIITVGSVGVITDKAGL 159

>IF6_METMP (Q6M156) Translation initiation factor 6 (aIF-6)|
          Length = 227

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 3/163 (1%)
 Frame = +2

Query: 119 MATRIQFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFESELADVIPVVKTSIGGTRIIG 298
           M  +  F     +GV S  T  Y    +   +      ++ L   IP  + +I  + +IG
Sbjct: 1   MIMKTYFSGVSTLGVHSLATEDYGFFPLSVDQKTMERMKNVLD--IPATQLNISNSSLIG 58

Query: 299 RLCVGNKNGLLLPHTTTDQELQHLRNCIPD---QVVVQRIDERLSALGNCISCNDHVALT 469
            LCVGN NGLL+P+ TT++EL+ ++  + +    V ++R+  + +A GN I  N+   + 
Sbjct: 59  SLCVGNSNGLLVPNITTEKELELIKMFLKENSLDVNLERLKAKNTAFGNLILTNNKGCII 118

Query: 470 HPDLDKATEELIADVLGVEVFRQTIAGNILVGSYCAFSNRGGL 598
             +L +   + I DVL VE      A    VGS    +++G L
Sbjct: 119 SEELSR-FRKTIEDVLDVESGVGNYAELPTVGSNGVATDKGCL 160

>IF6_SULAC (P38619) Translation initiation factor 6 (aIF-6)|
          Length = 223

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 38/114 (33%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
 Frame = +2

Query: 260 VVKTSIGGTRIIGRLCVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDERLSALGNC 439
           +++T+I  + ++G L  GN + +LLP T    E++ ++    D V V+ +D R +ALGN 
Sbjct: 47  IIQTTISKSVLVGILVTGNNDVILLPRTALADEIKVIKEQAKD-VRVEVVDIRPTALGNI 105

Query: 440 ISCNDHVALTHPDLDKATEELIADVLGVE-VFRQTIAGNILVGSYCAFSNRGGL 598
           I  N H AL + DL +A    +   L ++   + TIA  I VGS    +++ GL
Sbjct: 106 ILSNTHGALIYQDLSEAEINKVKKALQIDTAIKGTIANIITVGSVAVITDKAGL 159

>YPOB_STYLE (P14289) Hypothetical 22 kDa protein in overamplified macronuclear|
           DNA POB4
          Length = 204

 Score = 33.1 bits (74), Expect = 0.63
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +2

Query: 272 SIGGTRIIGRLCVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRI 409
           ++GG R  GR+C+G+     +P TTT     H  N    QV+ Q++
Sbjct: 93  AMGGRRSGGRICLGDPGAAAIPTTTTAPTATHQPNQQRQQVIPQQM 138

>MSRA1_LACLA (Q9CFC8) Peptide methionine sulfoxide reductase msrA 1 (EC 1.8.4.6)|
           (Protein-methionine-S-oxide reductase 1) (Peptide Met(O)
           reductase 1)
          Length = 183

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 11/36 (30%), Positives = 24/36 (66%)
 Frame = +3

Query: 183 PTVWLQLEDQRISTVHLSLSLQMSFLWSRPLSVALE 290
           P ++++ E+QRI+     ++L+ S +W +P+ V +E
Sbjct: 97  PVIFVESEEQRIAAQKSKIALEKSGIWDKPIVVPIE 132

>STAB2_HUMAN (Q8WWQ8) Stabilin-2 precursor (FEEL-2 protein) (Fasciclin EGF-like|
            laminin-type EGF-like and link domain-containing
            scavenger receptor 1) (FAS1 EGF-like and X-link
            domain-containing adhesion molecule 2) (Hyaluronan
            receptor for endocytosis) [
          Length = 2551

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = -2

Query: 580  ECTVAPNKDISCNCLTEYLNPKHICNKLLSCLVKVRVC 467
            ECT       +CNCL  Y     +C  +  CL K   C
Sbjct: 1529 ECTQTGPNQAACNCLPAYTGDGKVCTLINVCLTKNGGC 1566

>HOLB_YERPE (O69170) DNA polymerase III delta' subunit (EC 2.7.7.7)|
          Length = 340

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 24/86 (27%), Positives = 37/86 (43%)
 Frame = +2

Query: 287 RIIGRLCVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVAL 466
           +++G+   G  +  LL H+        L   +   ++ Q+     S  G C SC   +A 
Sbjct: 13  QLVGQHSTGRGHHALLLHSLPGNGEDALIYALSRWLMCQQRQGEKSC-GECHSCRLMLAG 71

Query: 467 THPDLDKATEELIADVLGVEVFRQTI 544
            HPD    T E     +GVE+ RQ I
Sbjct: 72  NHPDWYVLTPEKGKSSIGVELVRQLI 97

>SGCB_HUMAN (Q16585) Beta-sarcoglycan (Beta-SG) (43 kDa dystrophin-associated|
           glycoprotein) (43DAG) (A3b)
          Length = 318

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 14/61 (22%), Positives = 30/61 (49%)
 Frame = +2

Query: 236 SELADVIPVVKTSIGGTRIIGRLCVGNKNGLLLPHTTTDQELQHLRNCIPDQVVVQRIDE 415
           S++  + P+ K+++GG R    +  GN   ++    TT   +++ +  I   + +Q  D 
Sbjct: 114 SDMGVIHPLYKSTVGGRRNENLVITGNNQPIVFQQGTTKLSVENNKTSITSDIGMQFFDP 173

Query: 416 R 418
           R
Sbjct: 174 R 174

>MLP1_YEAST (Q02455) Protein MLP1 (Myosin-like protein 1)|
          Length = 1875

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -2

Query: 370 QMLKLLISGCVWQEKSILVSNTEAANYSSATDRG-LDHRNDICKLR 236
           Q L LL S   W EK +   N +  +Y   TD+  LD RN++ +LR
Sbjct: 202 QELTLLQSNNDWLEKELRSKNEQYLSYRQKTDKVILDIRNELNRLR 247

>CCD44_HUMAN (Q9BSH4) Coiled-coil domain-containing protein 44|
          Length = 297

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
 Frame = +2

Query: 344 TTDQELQHLRNCIPDQVVVQRIDERLSALGNC-ISC------NDHVALTHPDLDKA 490
           T D+E +++   I D   + ++ ++L +LG C +SC      N  V L  PDL++A
Sbjct: 221 TEDEEERNVFKFICDASSLHQVRKKLDSLGLCSVSCALEFIPNSKVQLAEPDLEQA 276

>PNT1_DROME (P51022) ETS-like protein pointed, isoform P1 (D-ETS-2)|
          Length = 623

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = -1

Query: 251 HLQAQTQMYCRNSLILQ--LQPDSRHL*AWRKHQLHSCSQTGYGSPWSIPLLRLSRFSSA 78
           H   Q     + SL+LQ   Q   +H      HQ     Q GYGS   +P  RLS  S+ 
Sbjct: 100 HTMQQQLQQQQQSLLLQHPQQQQQQH-----SHQSQQQQQHGYGSSAQLPHHRLSGGSTG 154

Query: 77  ATST 66
           +T+T
Sbjct: 155 STTT 158


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,750,165
Number of Sequences: 219361
Number of extensions: 1695225
Number of successful extensions: 4999
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 4742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4966
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5253413348
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)