>ATPD_RHOCA (P72244) ATP synthase delta chain (EC 3.6.3.14)|
          Length = 186

 Score = 34.3 bits (77), Expect = 0.28
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +3

Query: 234 QFAKLDGDLAKMSFERMA-NIAVREREMNSYTQSLGALLLDNEMKGKVASLMNLLDEEG 407
           Q  KL   LAK + + +  N+AV E  +      LG+ ++D  +K K+ASL N + E G
Sbjct: 128 QAEKLAATLAKQTGKTVKLNVAVDESLIGGMIVKLGSRMIDTTVKAKLASLQNAMKEVG 186

>ASTE_VIBVY (Q7MLE8) Succinylglutamate desuccinylase (EC 3.1.-.-)|
          Length = 342

 Score = 33.9 bits (76), Expect = 0.36
 Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
 Frame = +3

Query: 15  ALKPDPRDFLEHLRPYALVYIKNKKEQSGYYTAKEQVRLHQEFDNYLATWRWDPAVDDFF 194
           AL    RD +  + P  L      K    Y  ++  VRLHQ+FD     +R+D  V++F 
Sbjct: 236 ALDLTMRDLIAEVTPEHL-----PKPAITYRVSRTIVRLHQDFD-----FRFDDQVENFT 285

Query: 195 SFM--RTVGEDDENGQFAKLDGD 257
           SFM     G D +    AK D +
Sbjct: 286 SFMHGEVFGHDGDKPLMAKNDNE 308

>ASTE_VIBVU (Q8D926) Succinylglutamate desuccinylase (EC 3.1.-.-)|
          Length = 342

 Score = 33.9 bits (76), Expect = 0.36
 Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
 Frame = +3

Query: 15  ALKPDPRDFLEHLRPYALVYIKNKKEQSGYYTAKEQVRLHQEFDNYLATWRWDPAVDDFF 194
           AL    RD +  + P  L      K    Y  ++  VRLHQ+FD     +R+D  V++F 
Sbjct: 236 ALDLTMRDLIAEVTPEHL-----PKPAITYRVSRTIVRLHQDFD-----FRFDDQVENFT 285

Query: 195 SFM--RTVGEDDENGQFAKLDGD 257
           SFM     G D +    AK D +
Sbjct: 286 SFMHGEVFGHDGDKPLMAKNDNE 308

>YEX0_YEAST (P40085) Hypothetical 64.8 kDa protein in GDI1-COX15 intergenic|
           region
          Length = 556

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 22/63 (34%), Positives = 32/63 (50%)
 Frame = +3

Query: 288 NIAVREREMNSYTQSLGALLLDNEMKGKVASLMNLLDEEGFFSIDDESIDWAKKSFTDLV 467
           NIAV     NSY+ +L  LLL  +     +S++   D+EGFF I          +  D+V
Sbjct: 248 NIAV-----NSYSNALLTLLLSMQFAEIKSSVLKKFDKEGFFQI----------TIADVV 292

Query: 468 EQF 476
           E+F
Sbjct: 293 ERF 295

>UPF3_YEAST (P48412) Nonsense-mediated mRNA decay protein 3 (Up-frameshift|
           suppressor 3)
          Length = 387

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 37/145 (25%), Positives = 53/145 (36%), Gaps = 8/145 (5%)
 Frame = +3

Query: 81  NKKEQSGYYTAKEQVRLHQEFDN--YLATWRWDP---AVDDFFSFMRTVGEDDENGQFAK 245
           NKK    YY  K + RL +  +N  +    R  P     D+FF+ +R    DD  G    
Sbjct: 61  NKKRNREYYNYKRKARLGKSTENEGFKLVIRLLPPNLTADEFFAILRDNNNDD--GDKQD 118

Query: 246 LDGDLAKMS---FERMANIAVREREMNSYTQSLGALLLDNEMKGKVASLMNLLDEEGFFS 416
           + G L       FE   +  V +    S    L   L D E           +D +   +
Sbjct: 119 IQGKLKYSDWCFFEGHYSSKVFKNSTYSRCNFLFDNLSDLEKCANFIKTCKFIDNKDNIT 178

Query: 417 IDDESIDWAKKSFTDLVEQFNALTG 491
           I D  +    K FT   ++  AL G
Sbjct: 179 IPDMKLSPYVKKFTQTSKKDAALVG 203

>MFAP1_MOUSE (Q9CQU1) Microfibrillar-associated protein 1|
          Length = 439

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 20/72 (27%), Positives = 31/72 (43%)
 Frame = +3

Query: 264 KMSFERMANIAVREREMNSYTQSLGALLLDNEMKGKVASLMNLLDEEGFFSIDDESIDWA 443
           K   ERM N+   E E  +  ++ G ++ +  +KGK   L        FF  +DE +   
Sbjct: 301 KAEIERMRNLT--EEERRAELRANGKVITNKAVKGKYKFLQKYYHRGAFFMDEDEEVYKR 358

Query: 444 KKSFTDLVEQFN 479
             S   L + FN
Sbjct: 359 DFSAPTLEDHFN 370

>MFAP1_HUMAN (P55081) Microfibrillar-associated protein 1|
          Length = 439

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 20/72 (27%), Positives = 31/72 (43%)
 Frame = +3

Query: 264 KMSFERMANIAVREREMNSYTQSLGALLLDNEMKGKVASLMNLLDEEGFFSIDDESIDWA 443
           K   ERM N+   E E  +  ++ G ++ +  +KGK   L        FF  +DE +   
Sbjct: 301 KAEIERMRNLT--EEERRAELRANGKVITNKAVKGKYKFLQKYYHRGAFFMDEDEEVYKR 358

Query: 444 KKSFTDLVEQFN 479
             S   L + FN
Sbjct: 359 DFSAPTLEDHFN 370

>TRYS_CRIFA (O60993) Trypanothione synthetase (EC 6.3.1.9) (Cf-TS)|
          Length = 652

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +3

Query: 66  LVYIKNKKEQSGYYTAKEQVRLHQEFDNYLATWRWDPAVDDFFSFMRTVGED 221
           ++Y + +  + GY    + VR+     N   TW W+ A+ D+F+     G D
Sbjct: 430 VMYDEFRFNEEGYVVDSDGVRVR----NIWKTWMWESAISDYFAAQAERGAD 477

>MFA1P_CHICK (P55080) Microfibrillar-associated protein 1 (Associated|
           microfibril protein) (AMF)
          Length = 442

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 20/72 (27%), Positives = 31/72 (43%)
 Frame = +3

Query: 264 KMSFERMANIAVREREMNSYTQSLGALLLDNEMKGKVASLMNLLDEEGFFSIDDESIDWA 443
           K   ERM N+   E E  +  ++ G ++ +  +KGK   L        FF  +DE +   
Sbjct: 304 KAEIERMRNLT--EEERRAELRANGKVVTNKAVKGKYKFLQKYYHRGAFFMDEDEEVYKR 361

Query: 444 KKSFTDLVEQFN 479
             S   L + FN
Sbjct: 362 DFSAPTLEDHFN 373

>STE6_SCHPO (P26674) Protein ste6|
          Length = 911

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -1

Query: 390 DSSNLQLYPSSHYREGEL-PNSECNCSFHVPAQQYWPFAQRTFWQDRHPV 244
           DSS +Q + SS +   E  PN++C   FHV A       Q + W ++H V
Sbjct: 56  DSSKIQNFFSSFHSSNEKDPNAQCCAPFHVEAH-----LQDSAWFEKHGV 100


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,122,065
Number of Sequences: 219361
Number of extensions: 1788836
Number of successful extensions: 5120
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5117
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5158951200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)