Clone Information

BLAST Search Result

Clone Name	bags29a01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	BCDO2_MOUSE (Q99NF1) Beta,beta-carotene 9',10'-dioxygenase (EC 1...	44	5e-04
2	BCDO2_MACFA (Q8HXG8) Beta,beta-carotene 9',10'-dioxygenase (EC 1...	43	8e-04
3	BCDO2_HUMAN (Q9BYV7) Beta,beta-carotene 9',10'-dioxygenase (EC 1...	42	0.001
4	BCDO1_CHICK (Q9I993) Beta,beta-carotene 15,15'-monooxygenase (EC...	40	0.004
5	BCDO1_HUMAN (Q9HAY6) Beta,beta-carotene 15,15'-monooxygenase (EC...	37	0.044
6	MUC1_YEAST (P08640) Mucin-like protein 1 precursor	36	0.074
7	BCDO1_MOUSE (Q9JJS6) Beta,beta-carotene 15,15'-monooxygenase (EC...	35	0.17
8	Y43R_IRV6 (P18305) Hypothetical protein 443R	35	0.17
9	PKHA6_MOUSE (Q7TQG1) Pleckstrin homology domain-containing famil...	34	0.28
10	COX1_PLABE (O99252) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) ...	33	0.48
11	VIT1_FUNHE (Q90508) Vitellogenin-1 precursor (Vitellogenin I) (V...	33	0.63
12	TAF6_HUMAN (P49848) Transcription initiation factor TFIID subuni...	33	0.63
13	BCDO1_RAT (Q91XT5) Beta,beta-carotene 15,15'-monooxygenase (EC 1...	33	0.82
14	RPB1_MOUSE (P08775) DNA-directed RNA polymerase II largest subun...	33	0.82
15	RPB1_HUMAN (P24928) DNA-directed RNA polymerase II largest subun...	33	0.82
16	TAF6_RAT (Q63801) Transcription initiation factor TFIID subunit ...	33	0.82
17	TMPS9_MOUSE (P69525) Transmembrane protease, serine 9 (EC 3.4.21...	33	0.82
18	CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel ...	33	0.82
19	RPB1_CRIGR (P11414) DNA-directed RNA polymerase II largest subun...	33	0.82
20	SC24A_HUMAN (O95486) Protein transport protein Sec24A (SEC24-rel...	32	1.1
21	IF4G3_MOUSE (Q80XI3) Eukaryotic translation initiation factor 4 ...	32	1.1
22	ATX2L_MOUSE (Q7TQH0) Ataxin-2-like protein	32	1.8
23	YELL_DROSI (P62407) Protein yellow precursor	31	3.1
24	YELL_DROMA (P62408) Protein yellow precursor	31	3.1
25	CJ047_MOUSE (Q8C5R2) Protein C10orf47 homolog	31	3.1
26	YPX5_CAEEL (Q09277) Hypothetical protein F40H6.5	30	4.1
27	YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor	30	4.1
28	MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)	30	4.1
29	TS101_RAT (Q6IRE4) Tumor susceptibility gene 101 protein	30	5.3
30	TS101_MOUSE (Q61187) Tumor susceptibility gene 101 protein	30	5.3
31	P30_TOXGO (P13664) Major surface antigen p30 precursor	30	5.3
32	DIG1_CAEEL (Q09165) Mesocentin precursor	30	5.3
33	WSC4_YEAST (P38739) Cell wall integrity and stress response comp...	30	5.3
34	YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein P...	30	5.3
35	DNAJ2_STRCO (Q9RDD7) Chaperone protein dnaJ 2	30	5.3
36	DNAJ2_STRAW (Q82BY4) Chaperone protein dnaJ 2	30	5.3
37	YELL_DROYA (Q9BI17) Protein yellow precursor	30	6.9
38	YELL_DROME (P09957) Protein yellow precursor	30	6.9
39	YELL_DROER (Q9BI23) Protein yellow precursor	30	6.9
40	SYNJ2_HUMAN (O15056) Synaptojanin-2 (EC 3.1.3.36) (Synaptic inos...	30	6.9
41	SPG7_DICDI (P22698) Spore germination protein 270-11	30	6.9
42	SMAD1_RAT (P97588) Mothers against decapentaplegic homolog 1 (SM...	30	6.9
43	GBF_DICDI (P36417) G-box-binding factor (GBF)	30	6.9
44	NOT3_YEAST (P06102) General negative regulator of transcription ...	30	6.9
45	GGT_SYNY3 (P74181) Gamma-glutamyltranspeptidase precursor (EC 2....	30	6.9
46	IL1R1_RAT (Q02955) Interleukin-1 receptor type I precursor (IL-1...	30	6.9
47	NU153_RAT (P49791) Nuclear pore complex protein Nup153 (Nucleopo...	29	9.1
48	RBF1_CAEEL (P41885) Rabphilin-1	29	9.1
49	NHL1_CAEEL (Q03601) RING finger protein nhl-1	29	9.1
50	RL2_SCHPO (P08093) 60S ribosomal protein L2 (K5) (K37) (KD4)	29	9.1
51	HWP1_CANAL (P46593) Hyphal wall protein 1 (Cell elongation prote...	29	9.1

>BCDO2_MOUSE (Q99NF1) Beta,beta-carotene 9',10'-dioxygenase (EC 1.14.99.-)|
           (Beta-carotene dioxygenase 2) (B-diox-II)
          Length = 532

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 3/135 (2%)
 Frame = +1

Query: 121 VDFPRINES-YTGRKQRYVY-CTILDSIAKVTGIIKFDLHADPESGKKQLEVGGNVTGIY 294
           ++FP+IN   + G+K  + Y C     +     +IK D+        K L V        
Sbjct: 416 IEFPQINYGRFNGKKYSFFYGCGFRHLVGD--SLIKVDVT------NKTLRVWRE----- 462

Query: 295 DLGPGRFGSEAVFVPKEPGVSGEEDDGYLIFFVHDENTGKSE-VNVIDAKTMSADPVAVV 471
               G + SE VFVP  PG   EED G ++  V   N  +S  + V+DAK+ +   +   
Sbjct: 463 ---EGFYPSEPVFVPV-PGAD-EEDSGVILSVVITPNQSESNFLLVLDAKSFTE--LGRA 515

Query: 472 ELPNRVPYGFHAFFV 516
           E+P ++PYGFH  FV
Sbjct: 516 EVPVQMPYGFHGTFV 530

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>BCDO2_MACFA (Q8HXG8) Beta,beta-carotene 9',10'-dioxygenase (EC 1.14.99.-)|
           (Beta-carotene dioxygenase 2) (B-diox-II)
          Length = 556

 Score = 42.7 bits (99), Expect = 8e-04
 Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
 Frame = +1

Query: 121 VDFPRINES-YTGRKQRYVY-CTILDSIAKVTGIIKFDLHADPESGKKQLEVGGNVTGIY 294
           ++FP+I    ++G+K R+ Y C     +     +IK D+        K L+V        
Sbjct: 440 IEFPQIYYGQFSGKKYRFFYGCGFRHLVGD--SLIKVDVV------NKTLKVWRE----- 486

Query: 295 DLGPGRFGSEAVFVPKEPGVSGEEDDGYLIFFVHDENTGKSE-VNVIDAKTMSADPVAVV 471
               G + SE VFVP  PG + EED G ++  V   N  +S  + V+DAK    + +   
Sbjct: 487 ---DGFYPSEPVFVPV-PGTN-EEDGGVILSVVITPNQNESNFLLVLDAKNF--EELGRA 539

Query: 472 ELPNRVPYGFHAFFV 516
           E+P ++PYGFH  F+
Sbjct: 540 EVPVQMPYGFHGTFI 554

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>BCDO2_HUMAN (Q9BYV7) Beta,beta-carotene 9',10'-dioxygenase (EC 1.14.99.-)|
           (Beta-carotene dioxygenase 2) (B-diox-II)
          Length = 556

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
 Frame = +1

Query: 307 GRFGSEAVFVPKEPGVSGEEDDGYLIFFVHDENTGKSE-VNVIDAKTMSADPVAVVELPN 483
           G + SE VFVP  PG + EED G ++  V   N  +S  + V+DAK    + +   E+P 
Sbjct: 488 GFYPSEPVFVPA-PGTN-EEDGGVILSVVITPNQNESNFLLVLDAKNF--EELGRAEVPV 543

Query: 484 RVPYGFHAFFV 516
           ++PYGFH  F+
Sbjct: 544 QMPYGFHGTFI 554

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>BCDO1_CHICK (Q9I993) Beta,beta-carotene 15,15'-monooxygenase (EC 1.14.99.36)|
           (Beta-carotene dioxygenase 1)
          Length = 526

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 1/146 (0%)
 Frame = +1

Query: 97  QKQLSVAAVDFPRINESYTGRKQRYVYCTILDSIAKVTGIIKFDLHADPESGKKQLEVGG 276
           Q ++    ++ PR+N  Y G+K +YVY T +      T I K ++       K+ L  G 
Sbjct: 394 QPEILCEGIELPRVNYDYNGKKYKYVYATEVQWSPVPTKIAKLNVQT-----KEVLHWGE 448

Query: 277 NVTGIYDLGPGRFGSEAVFVPKEPGVSGEEDDGYLIFFVHDENTGKSE-VNVIDAKTMSA 453
           +           + SE +FVP     + EED+G ++  V      K+  + ++DAKT   
Sbjct: 449 DHC---------WPSEPIFVPSPD--AREEDEGVVLTCVVVSEPNKAPFLLILDAKTFKE 497

Query: 454 DPVAVVELPNRVPYGFHAFFVNEEQL 531
              A V +   +    H  F+ +  L
Sbjct: 498 LGRATVNV--EMHLDLHGMFIPQNDL 521

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>BCDO1_HUMAN (Q9HAY6) Beta,beta-carotene 15,15'-monooxygenase (EC 1.14.99.36)|
           (Beta-carotene dioxygenase 1)
          Length = 547

 Score = 37.0 bits (84), Expect = 0.044
 Identities = 36/142 (25%), Positives = 63/142 (44%)
 Frame = +1

Query: 97  QKQLSVAAVDFPRINESYTGRKQRYVYCTILDSIAKVTGIIKFDLHADPESGKKQLEVGG 276
           Q +     ++ PR+N ++ G++ RYV+ T +      T IIK+D+    +S  K  E   
Sbjct: 396 QPEFLYEGLELPRVNYAHNGKQYRYVFATGVQWSPIPTKIIKYDILT--KSSLKWRE--- 450

Query: 277 NVTGIYDLGPGRFGSEAVFVPKEPGVSGEEDDGYLIFFVHDENTGKSEVNVIDAKTMSAD 456
                 D  P    +E +FVP  PG   E+D   L   V  +      + ++DAK+ +  
Sbjct: 451 -----DDCWP----AEPLFVP-APGAKDEDDGVILSAIVSTDPQKLPFLLILDAKSFTEL 500

Query: 457 PVAVVELPNRVPYGFHAFFVNE 522
             A V++   +    H  F+ +
Sbjct: 501 ARASVDVDMHM--DLHGLFITD 520

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>MUC1_YEAST (P08640) Mucin-like protein 1 precursor|
          Length = 1367

 Score = 36.2 bits (82), Expect = 0.074
 Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
 Frame = -2

Query: 476 SSTTATGSADMVLASITFTSDFPVFSSCTKNIRYP----------SSSSPETPGSLGTNT 327
           SS+T   S+  V +S T +S  PV SS T++   P          SSS+P T  +  +++
Sbjct: 360 SSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSS 419

Query: 326 ASEPNLPGPRSYMPVTFPPTSSCFLPLSGSACRSN 222
           A   +     S  PVT   T S   P++ S   S+
Sbjct: 420 APVTSSTTESSSAPVTSSTTESSSAPVTSSTTESS 454



 Score = 33.1 bits (74), Expect = 0.63
 Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
 Frame = -2

Query: 476 SSTTATGSADMVL--ASITFTSDFPVFSSCTKNIRYPSSSSPETPGSLGTNTASEPNLPG 303
           SSTT + SA +    +S T +S  PV SS T+     SSS+P T  +  +++A   +   
Sbjct: 385 SSTTESSSAPVPTPSSSTTESSSAPVTSSTTE-----SSSAPVTSSTTESSSAPVTSSTT 439

Query: 302 PRSYMPVTFPPT--SSCFLPLSGSACRSNLMIPVTFAMLSS 186
             S  PVT   T  SS  +P   S+   +   PVT +   S
Sbjct: 440 ESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTES 480



 Score = 30.8 bits (68), Expect = 3.1
 Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 13/102 (12%)
 Frame = -2

Query: 476  SSTTATGSADMVLASITFTSDFPV---FSSCTKNIRYP----------SSSSPETPGSLG 336
            SS+T   S+  V +S T +S  PV    SS T++   P          SSS+P    S  
Sbjct: 741  SSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSS 800

Query: 335  TNTASEPNLPGPRSYMPVTFPPTSSCFLPLSGSACRSNLMIP 210
            T  +S   +P P S   +T    SS   P S S   S++ +P
Sbjct: 801  TTESSVAPVPTPSSSSNITSSAPSS--TPFSSSTESSSVPVP 840



 Score = 29.3 bits (64), Expect = 9.1
 Identities = 36/119 (30%), Positives = 50/119 (42%), Gaps = 34/119 (28%)
 Frame = -2

Query: 476 SSTTATGSADMVL-----------------ASITFTSDFPVFSSCTKN----IRYPSSSS 360
           SSTT + SA +                   +S T +S  PV SS T++    +  PSSS+
Sbjct: 586 SSTTESSSAPVPTPSSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSST 645

Query: 359 PE-------TPGSLGTNTASEPNLPGP------RSYMPVTFPPTSSCFLPLSGSACRSN 222
            E       TP S  T ++S P +P P       S  PVT   T S   P++ S   S+
Sbjct: 646 TESSSAPVPTPSSSTTESSSAP-VPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESS 703

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>BCDO1_MOUSE (Q9JJS6) Beta,beta-carotene 15,15'-monooxygenase (EC 1.14.99.36)|
           (Beta-carotene dioxygenase 1)
          Length = 566

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 29/118 (24%), Positives = 52/118 (44%)
 Frame = +1

Query: 97  QKQLSVAAVDFPRINESYTGRKQRYVYCTILDSIAKVTGIIKFDLHADPESGKKQLEVGG 276
           Q ++    ++ PRIN +Y G+  RY++   +      T I+K+D+    +S  K  E   
Sbjct: 396 QPEVLYEGLELPRINYAYNGKPYRYIFAAEVQWSPVPTKILKYDILT--KSSLKWSE--- 450

Query: 277 NVTGIYDLGPGRFGSEAVFVPKEPGVSGEEDDGYLIFFVHDENTGKSEVNVIDAKTMS 450
                       + +E +FVP  PG   E+D   L   V  +      + ++DAK+ +
Sbjct: 451 ---------ESCWPAEPLFVP-TPGAKDEDDGVILSAIVSTDPQKLPFLLILDAKSFT 498

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>Y43R_IRV6 (P18305) Hypothetical protein 443R|
          Length = 2432

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
 Frame = -2

Query: 476 SSTTATGSADMVLASITFTSDFPVFS--SCTKNIRYPSSSSPETPGSLGTNTASEPNLPG 303
           S+TT       +   +T T+  P+ +  S T +   P S+S +  GS  + T +E  + G
Sbjct: 258 SATTLIEGKIQLAGDLTGTATSPLVAPGSITISKMAPLSASSKLIGSSSSTTVAEIGVGG 317

Query: 302 P----RSYMPVTFPPTSSCFLPLSGSACRSNLMIP 210
                   +    P  S+ FLPLSG     N+++P
Sbjct: 318 SLEISSGILQENIPSLSNIFLPLSGGTMAGNIIVP 352

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>PKHA6_MOUSE (Q7TQG1) Pleckstrin homology domain-containing family A member 6|
           (Phosphoinositol 3-phosphate-binding protein 3) (PEPP-3)
          Length = 1173

 Score = 34.3 bits (77), Expect = 0.28
 Identities = 23/70 (32%), Positives = 34/70 (48%)
 Frame = -2

Query: 476 SSTTATGSADMVLASITFTSDFPVFSSCTKNIRYPSSSSPETPGSLGTNTASEPNLPGPR 297
           S+T ++ S    L+S + TS    FS  +      S  SP  PGS  +     P  P P+
Sbjct: 757 SATYSSNSPASPLSSASLTSPLSPFSMVSG-----SQGSPTKPGS--SEEPGPPRPPLPK 809

Query: 296 SYMPVTFPPT 267
           +Y+P+  PPT
Sbjct: 810 AYVPLESPPT 819

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>COX1_PLABE (O99252) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c|
           oxidase polypeptide I)
          Length = 476

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 16/26 (61%), Positives = 18/26 (69%)
 Frame = -1

Query: 600 VCTAYFSSFGITHSSSHLCLLMYQLF 523
           +CT   S+FGITHSSS LCLL    F
Sbjct: 329 LCTYMSSNFGITHSSSLLCLLFICTF 354

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>VIT1_FUNHE (Q90508) Vitellogenin-1 precursor (Vitellogenin I) (VTG I) [Contains:|
            Lipovitellin-1 (LV1); Phosvitin (PV); Lipovitellin-2
            (LV2)]
          Length = 1704

 Score = 33.1 bits (74), Expect = 0.63
 Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
 Frame = +2

Query: 23   KTRSWRTSGMSCMR*DST*KLGLLHRSNCRSLL*TFLESTRAIPAESSGMSTARYSTASR 202
            ++RS R+S  S     S+ K+ L  R+N  S   +    + +  + SS  S++  S++SR
Sbjct: 1094 ESRSSRSSSSSSSSSRSSRKIDLAARTNSSSSSSSRRSRSSSSSSSSSSSSSSSSSSSSR 1153

Query: 203  R*PGSSNSTCTPIQRAA------RSSSKSGETLQA 289
            R   SS+S+ +   R++      RSSS S  T  A
Sbjct: 1154 RSSSSSSSSSSSSSRSSRRVNSTRSSSSSSRTSSA 1188

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>TAF6_HUMAN (P49848) Transcription initiation factor TFIID subunit 6|
           (Transcription initiation factor TFIID 70 kDa subunit)
           (TAF(II)70) (TAFII-70) (TAFII-80) (TAFII80)
          Length = 677

 Score = 33.1 bits (74), Expect = 0.63
 Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
 Frame = -2

Query: 473 STTATGSADMVLASITFT--SDFPVFSSCTKNIRYPSSSSPETPGSLGTNTASEPNLP-- 306
           ST+A GS     + +T T  S  P+    +     P S++P  PGS+        +LP  
Sbjct: 557 STSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATTAPPSTAPSGPGSVQKYIVV--SLPPT 614

Query: 305 -----GPRSYMPVTFPPTSSCFLPLSGSA 234
                GP S+ P   PP +S   PLSGSA
Sbjct: 615 GEGKGGPTSH-PSPVPPPASSPSPLSGSA 642

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>BCDO1_RAT (Q91XT5) Beta,beta-carotene 15,15'-monooxygenase (EC 1.14.99.36)|
           (Beta-carotene dioxygenase 1)
          Length = 566

 Score = 32.7 bits (73), Expect = 0.82
 Identities = 31/140 (22%), Positives = 60/140 (42%)
 Frame = +1

Query: 97  QKQLSVAAVDFPRINESYTGRKQRYVYCTILDSIAKVTGIIKFDLHADPESGKKQLEVGG 276
           Q ++    ++ PRIN ++ G+  RY++   +      T I+K+D+    +S  K  E   
Sbjct: 396 QPEVLYEGLELPRINYAHNGKPYRYIFAAEVQWSPVPTKILKYDVLT--KSSLKWSE--- 450

Query: 277 NVTGIYDLGPGRFGSEAVFVPKEPGVSGEEDDGYLIFFVHDENTGKSEVNVIDAKTMSAD 456
                       + +E +FVP  PG   E+D   L   +  +      + ++DAK+ +  
Sbjct: 451 ---------ESCWPAEPLFVP-TPGAKDEDDGVILSAIISTDPQKLPFLLILDAKSFTEL 500

Query: 457 PVAVVELPNRVPYGFHAFFV 516
             A V++   +    H  F+
Sbjct: 501 ARASVDVDMHL--DLHGLFI 518

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>RPB1_MOUSE (P08775) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
            (RPB1)
          Length = 1970

 Score = 32.7 bits (73), Expect = 0.82
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = -2

Query: 377  YPSSSSPETPGSLGTNTASEPNLPGPRSYMPVTFPPTSSCFLPLS 243
            Y  + SP TPGS G+   S P +P P   M  ++ PTS  + P S
Sbjct: 1561 YSPAWSP-TPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRS 1604

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>RPB1_HUMAN (P24928) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
            (RPB1)
          Length = 1970

 Score = 32.7 bits (73), Expect = 0.82
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = -2

Query: 377  YPSSSSPETPGSLGTNTASEPNLPGPRSYMPVTFPPTSSCFLPLS 243
            Y  + SP TPGS G+   S P +P P   M  ++ PTS  + P S
Sbjct: 1561 YSPAWSP-TPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRS 1604

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>TAF6_RAT (Q63801) Transcription initiation factor TFIID subunit 6|
           (Transcription initiation factor TFIID 70 kDa subunit)
           (TAF(II)70) (TAFII-70) (TAFII-80) (TAFII80) (p80)
          Length = 678

 Score = 32.7 bits (73), Expect = 0.82
 Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
 Frame = -2

Query: 473 STTATGSADMVLASITFT--SDFPVFSSCTKNIRYPSSSSPETPGSLGTNTASEPNLP-- 306
           ST+A GS     + +T T  S  P+    +     P S++P  PGS+        +LP  
Sbjct: 557 STSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATTAPPSTAPAGPGSVQKYIVV--SLPPT 614

Query: 305 -----GPRSYMPVTFPPTSSCFLPLSGSA 234
                GP S+ P   PP+SS   PL GSA
Sbjct: 615 GEGKGGPPSH-PSPVPPSSSSPSPLGGSA 642

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>TMPS9_MOUSE (P69525) Transmembrane protease, serine 9 (EC 3.4.21.-)|
           (Polyserase-1) (Polyserine protease 1) (Polyserase-I)
           [Contains: Serase-1; Serase-2; Serase-3]
          Length = 1065

 Score = 32.7 bits (73), Expect = 0.82
 Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
 Frame = -2

Query: 485 RFGSSTTATGSADMVLASITFTSDFPVFSSCTKNIRYPSSSSPETPGSLGTNTASEPN-L 309
           R G  T  T   D +L  +T  +D PV  + T     PS+  P +P S   NT ++P   
Sbjct: 419 RPGVYTRVTRLRDWIL-EVTSAADMPVVPTATPAPATPSTPWPTSPESWAPNTFAKPTAA 477

Query: 308 PGPRSYMPVTFPPTSSC 258
           P P    P T      C
Sbjct: 478 PSPVPLHPSTTAKPQEC 494

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>CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel alpha-1A subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.1)
            (Calcium channel, L type, alpha-1 polypeptide isoform 4)
            (Brain calcium channel I) (BI)
          Length = 2424

 Score = 32.7 bits (73), Expect = 0.82
 Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
 Frame = -3

Query: 484  GSAARRPPPDQQTWSWHQSHSLQISLCSHRAQRISGTHRLL--PRKHQAPWARTP-PPSR 314
            G A RR P  ++  +   S     S+C  RA R +G  RLL  PR  QAP AR P  P+R
Sbjct: 2301 GRALRRAPGPREPLA-QDSPGRGPSVCLARAARPAGPQRLLPGPRTGQAPRARLPQKPAR 2359

Query: 313  TYQ 305
            + Q
Sbjct: 2360 SVQ 2362

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>RPB1_CRIGR (P11414) DNA-directed RNA polymerase II largest subunit (EC|
           2.7.7.6) (RPB1) (Fragment)
          Length = 467

 Score = 32.7 bits (73), Expect = 0.82
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = -2

Query: 377 YPSSSSPETPGSLGTNTASEPNLPGPRSYMPVTFPPTSSCFLPLS 243
           Y  + SP TPGS G+   S P +P P   M  ++ PTS  + P S
Sbjct: 58  YSPAWSP-TPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRS 101

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>SC24A_HUMAN (O95486) Protein transport protein Sec24A (SEC24-related protein A)|
           (Fragment)
          Length = 1078

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = -2

Query: 380 RYPSSSSPETPGSLGTNTASEPNLPGPRSYMPVTFPPTSSCFLP 249
           R P +S+P TP     ++   P +P P S  P T P  SS FLP
Sbjct: 73  RPPVASNPVTPS---LHSGPAPRMPLPASQNPATTPMPSSSFLP 113

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>IF4G3_MOUSE (Q80XI3) Eukaryotic translation initiation factor 4 gamma 3|
           (eIF-4-gamma 3) (eIF-4G 3) (eIF4G 3) (eIF-4-gamma II)
           (eIF4GII)
          Length = 1579

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
 Frame = -2

Query: 410 PVFSSCTKNIRYP-SSSSPETPGSLGTNTASEPNLPGPRSYMPVTFPPTSSCFLPLSGSA 234
           PVF S +  +R   S    E  G +    A EP    PR+  P + PP +   LP   SA
Sbjct: 226 PVFQSPSTVLRLVLSGEKKEQAGQMPETAAGEPTPEPPRTSSPTSLPPLARSSLPSPMSA 285

Query: 233 CRSN 222
             S+
Sbjct: 286 ALSS 289

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>ATX2L_MOUSE (Q7TQH0) Ataxin-2-like protein|
          Length = 1049

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
 Frame = -2

Query: 368 SSSPETPGSLGTNTASEPNLPGPRSYMP------VTFPPTSSCFLPLSGSACRSNLMIPV 207
           S+ P    S+   +A+ P LP  R Y P         P ++SC  P  GSA  S+  IPV
Sbjct: 424 SNRPSGEASVPPTSAALPFLPVGRMYPPRSPKSAAPAPVSASCPEPPIGSAVASSASIPV 483

Query: 206 TFAML 192
           T +++
Sbjct: 484 TSSVV 488

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>YELL_DROSI (P62407) Protein yellow precursor|
          Length = 541

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 14/21 (66%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = -3

Query: 367 LLPRKHQAPWART-PPPSRTY 308
           LLP+K Q  WA + PPPSRTY
Sbjct: 440 LLPQKPQTSWASSPPPPSRTY 460

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>YELL_DROMA (P62408) Protein yellow precursor|
          Length = 541

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 14/21 (66%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = -3

Query: 367 LLPRKHQAPWART-PPPSRTY 308
           LLP+K Q  WA + PPPSRTY
Sbjct: 440 LLPQKPQTSWASSPPPPSRTY 460

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>CJ047_MOUSE (Q8C5R2) Protein C10orf47 homolog|
          Length = 471

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 22/55 (40%), Positives = 27/55 (49%)
 Frame = -2

Query: 374 PSSSSPETPGSLGTNTASEPNLPGPRSYMPVTFPPTSSCFLPLSGSACRSNLMIP 210
           PS +   TP   G   A+E +LP P S  P  FP   S  +P + SA R  LM P
Sbjct: 133 PSDTKHGTPFLEGGKQAAENSLPPPDSRGPEVFPLPPSLPVP-APSAPRKELMSP 186

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>YPX5_CAEEL (Q09277) Hypothetical protein F40H6.5|
          Length = 1216

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
 Frame = -2

Query: 473  STTATGSADMVLASITFTSDFPVFSSCTKNI----RYPSSSSPETP-------GSLGTNT 327
            +TT   S  +  AS + ++     +S T+NI    + P +S+ + P       G+  T++
Sbjct: 819  TTTVEPSTPLETASTSQSTPSATLTSTTENIPSTSKIPETSTTQRPTSPILTSGATSTSS 878

Query: 326  ASEPNLPGPRSYMPVTFPPTSS 261
            ++E     P +    T PPT++
Sbjct: 879  STESTTTSPTTSTTTTLPPTTT 900

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>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor|
          Length = 374

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 26/97 (26%), Positives = 45/97 (46%)
 Frame = -2

Query: 476 SSTTATGSADMVLASITFTSDFPVFSSCTKNIRYPSSSSPETPGSLGTNTASEPNLPGPR 297
           SSTT++ S+    +S T T+  P  SS + +    SSSS  +  S  ++++S  +     
Sbjct: 133 SSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----- 187

Query: 296 SYMPVTFPPTSSCFLPLSGSACRSNLMIPVTFAMLSS 186
                    +SS     S S+  S+  +P+T +  SS
Sbjct: 188 -------SSSSSSSSSSSSSSSSSSSSVPITSSTSSS 217

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>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)|
          Length = 5179

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 25/97 (25%), Positives = 44/97 (45%)
 Frame = -2

Query: 476  SSTTATGSADMVLASITFTSDFPVFSSCTKNIRYPSSSSPETPGSLGTNTASEPNLPGPR 297
            ++T +  +  M   S T T   P+ ++ T     PSS++  +P      T S    P P 
Sbjct: 1686 TTTPSPPTTTMTTPSPTTTPSSPITTTTT-----PSSTTTPSPPPTTMTTPSPTTTPSPP 1740

Query: 296  SYMPVTFPPTSSCFLPLSGSACRSNLMIPVTFAMLSS 186
            +    T PPT++   PL+ +    ++  P TF+  S+
Sbjct: 1741 TTTMTTLPPTTTS-SPLTTTPLPPSI-TPPTFSPFST 1775

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>TS101_RAT (Q6IRE4) Tumor susceptibility gene 101 protein|
          Length = 391

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = -2

Query: 431 ITFTSDFPVFSSCTKNIRYPSSSSPETPGSLGTNTASEPNLPGPRSYMPVTFPPTSS 261
           + F  + PVFS  T +  YP  ++   P     NT+  P++P   S  P  +PP  S
Sbjct: 133 VIFGEEPPVFSRPTVSASYPPYTAAGPP-----NTSYLPSMPSGISAYPSGYPPNPS 184

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>TS101_MOUSE (Q61187) Tumor susceptibility gene 101 protein|
          Length = 391

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = -2

Query: 431 ITFTSDFPVFSSCTKNIRYPSSSSPETPGSLGTNTASEPNLPGPRSYMPVTFPPTSS 261
           + F  + PVFS  T +  YP  ++   P     NT+  P +P   S  P  +PP  S
Sbjct: 133 VIFGEEPPVFSRPTVSASYPPYTATGPP-----NTSYMPGMPSGISAYPSGYPPNPS 184

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>P30_TOXGO (P13664) Major surface antigen p30 precursor|
          Length = 336

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
 Frame = -2

Query: 401 SSCTKNIRYPSSSSPETPGSLGTNTASEPNLPGPRSYMPV-TFPPTSSCFLP--LSGSAC 231
           SSCT      SS  PE   S  T  ++  +  G +  +P+  FP T+  F+   + G   
Sbjct: 108 SSCTSKAVTLSSLIPEAEDSWWTGDSASLDTAGIKLTVPIEKFPVTTQTFVVGCIKGDDA 167

Query: 230 RSNLMIPVTFAMLSSIVQ*TYRC 162
           +S ++     A  SS+V    RC
Sbjct: 168 QSCMVTVTVQARASSVVNNVARC 190

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>DIG1_CAEEL (Q09165) Mesocentin precursor|
          Length = 13100

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 5/99 (5%)
 Frame = +1

Query: 220 KFDLHADPESGKKQLEVGGNVTGIYDLGPGRF-----GSEAVFVPKEPGVSGEEDDGYLI 384
           +F   A+ E+GK   ++   VTG     P R      G +     + P ++     GY +
Sbjct: 558 QFSCVAENEAGKSTKKINVTVTG--PSAPERIRYQIDGDKVTLQWEPPQITNGPMAGYDV 615

Query: 385 FFVHDENTGKSEVNVIDAKTMSADPVAVVELPNRVPYGF 501
           F+  D +  + +  V      +A    V+ L  + PY F
Sbjct: 616 FYTEDPSLPRDQWKVHHIDDPNARTTTVLRLNEKTPYTF 654

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>WSC4_YEAST (P38739) Cell wall integrity and stress response component 4|
           precursor
          Length = 605

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 25/96 (26%), Positives = 44/96 (45%)
 Frame = -2

Query: 476 SSTTATGSADMVLASITFTSDFPVFSSCTKNIRYPSSSSPETPGSLGTNTASEPNLPGPR 297
           SST  T S+  +  S T ++     ++   +   P+SSS  TP S    T S    P   
Sbjct: 240 SSTPTTTSSAPISTSTTSSTSTSTSTTSPTSSSAPTSSSNTTPTSTTFTTTSPSTAP--- 296

Query: 296 SYMPVTFPPTSSCFLPLSGSACRSNLMIPVTFAMLS 189
           S   VT+  TS+   P++ +    NL   + +++++
Sbjct: 297 SSTTVTY--TSTTASPITSTITSVNLQTSLKYSVIT 330



 Score = 29.6 bits (65), Expect = 6.9
 Identities = 34/114 (29%), Positives = 44/114 (38%), Gaps = 16/114 (14%)
 Frame = -2

Query: 476 SSTTATGSADMVLASIT-FTSDFPVFSSCTKNIRYPSSSSPETP---------------G 345
           S+TT+T S+     S+T  TS     +S T      SSSS  TP                
Sbjct: 200 STTTSTSSSTSTTVSVTSSTSTTTSTTSSTLISTSTSSSSSSTPTTTSSAPISTSTTSST 259

Query: 344 SLGTNTASEPNLPGPRSYMPVTFPPTSSCFLPLSGSACRSNLMIPVTFAMLSSI 183
           S  T+T S  +   P S    T  PTS+ F   S S   S+  +  T    S I
Sbjct: 260 STSTSTTSPTSSSAPTSSSNTT--PTSTTFTTTSPSTAPSSTTVTYTSTTASPI 311

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>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c|
           precursor
          Length = 943

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
 Frame = -2

Query: 476 SSTTATGSADMVLASITFTSDFPVFSSCTKNIRYPSSSSPETPGSLGTN--TASEPNLPG 303
           SS  ++ +    LAS + TS     SS T +    SS++  +  S  TN  T++ P    
Sbjct: 117 SSLASSSTTSSSLASSSITSSSLASSSITSSSLASSSTTSSSLASSSTNSTTSATPTSSA 176

Query: 302 PRSYMPVTFPPTSSCFLPLSGSACRSNLMIPVTFAMLSS 186
             S +  T    S+    L+ S+  S      T + LSS
Sbjct: 177 TSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSLSS 215

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>DNAJ2_STRCO (Q9RDD7) Chaperone protein dnaJ 2|
          Length = 378

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 19/52 (36%), Positives = 23/52 (44%)
 Frame = -1

Query: 456 ISRHGLGINHIHFRFPCVLIVHKEYQVPIVFFPGNTRLLGHEHRLRAEPTRT 301
           I +HG G+ H+       LIVH E   P    P   RLL    +LR E   T
Sbjct: 306 IPKHGRGVTHLRGGGRGDLIVHVEVTTPGKLDPEQERLLRELAKLRGEERPT 357

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>DNAJ2_STRAW (Q82BY4) Chaperone protein dnaJ 2|
          Length = 378

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 20/52 (38%), Positives = 22/52 (42%)
 Frame = -1

Query: 456 ISRHGLGINHIHFRFPCVLIVHKEYQVPIVFFPGNTRLLGHEHRLRAEPTRT 301
           I  HG GI H+       LIVH E   P    P   RLL    +LR E   T
Sbjct: 306 IPLHGRGITHLRGGGRGDLIVHVEVTTPTKMDPEQERLLRELAKLRGEERPT 357

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>YELL_DROYA (Q9BI17) Protein yellow precursor|
          Length = 541

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 13/21 (61%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = -3

Query: 367 LLPRKHQAPWART-PPPSRTY 308
           +LP+K Q  WA + PPPSRTY
Sbjct: 440 VLPQKPQTSWASSPPPPSRTY 460

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>YELL_DROME (P09957) Protein yellow precursor|
          Length = 541

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 13/21 (61%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = -3

Query: 367 LLPRKHQAPWART-PPPSRTY 308
           +LP+K Q  WA + PPPSRTY
Sbjct: 440 VLPQKPQTSWASSPPPPSRTY 460

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>YELL_DROER (Q9BI23) Protein yellow precursor|
          Length = 541

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 13/21 (61%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = -3

Query: 367 LLPRKHQAPWART-PPPSRTY 308
           +LP+K Q  WA + PPPSRTY
Sbjct: 440 VLPQKPQTSWASSPPPPSRTY 460

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>SYNJ2_HUMAN (O15056) Synaptojanin-2 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 2)
          Length = 1496

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
 Frame = -3

Query: 499  NRKEPGSAARRPPPDQQTWSWHQSHSLQISLCSHRAQRISGTHRLLP-RKHQAPWART 329
            NR  P    +RPPP         +    IS  +H    I  T RLLP    Q P ART
Sbjct: 1100 NRPRPPQPPQRPPPPTGLMVKKSASDASISSGTHGQYSILQTARLLPGAPQQPPKART 1157

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>SPG7_DICDI (P22698) Spore germination protein 270-11|
          Length = 532

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
 Frame = -2

Query: 497 P*GTRFGSSTTATGSADMVLASITFTSDFPVFSSCTKN-------IRYPSSSSPETPGSL 339
           P  T   S+TT+ GSA                SS T N           SSSS  + GS+
Sbjct: 129 PTSTTSASTTTSGGSATTTTGEPITDGSNGGASSTTGNSGTTGSATTTTSSSSDNSDGSV 188

Query: 338 GTNTASEPNL-PGPRSYMPVTFPPTS 264
           GT+T + P +     S +  T PPT+
Sbjct: 189 GTSTTTSPAITTSSGSIIDPTSPPTT 214

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>SMAD1_RAT (P97588) Mothers against decapentaplegic homolog 1 (SMAD 1)|
           (Mothers against DPP homolog 1)
          Length = 468

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -2

Query: 380 RYPSSSSPETPGSLGTNTASEPNL--PGPRSYMPVTFPPTSSCFLP 249
           +YP+SS P +PGS  +     P    PG    MP   PP +  +LP
Sbjct: 186 QYPNSSYPNSPGSSSSTYPHSPTSSDPGSPFQMPADTPPPA--YLP 229

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>GBF_DICDI (P36417) G-box-binding factor (GBF)|
          Length = 708

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
 Frame = -2

Query: 371 SSSSP-ETPGSLGTNTASEPNLPGPRSYM--------PVTFPPTSSCFLPLSGSACRSNL 219
           SSSSP +T G    +  S   LP P  +         P+ FPPTSS    L GS+   + 
Sbjct: 16  SSSSPSQTIGGSDLSNISALPLPLPSIFTTAQNQMNPPILFPPTSSL---LGGSSNTPSF 72

Query: 218 MIPVTFAMLSSI 183
           ++P +  M S++
Sbjct: 73  LLPPSSIMSSNV 84

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>NOT3_YEAST (P06102) General negative regulator of transcription subunit 3|
          Length = 836

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -2

Query: 374 PSSSSPETPGSLGTNTASEPN-LPGPRSYMPVTFP 273
           PSS++PETP ++ T+    PN + G  +  P T P
Sbjct: 360 PSSATPETPTNVHTHIHQTPNGITGATTLKPATLP 394

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>GGT_SYNY3 (P74181) Gamma-glutamyltranspeptidase precursor (EC 2.3.2.2)|
           [Contains: Gamma-glutamyltransferase large chain;
           Gamma-glutamyltransferase small chain]
          Length = 518

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = -1

Query: 438 GINHIHFRFPCVLIVHKEYQVPIVFFPGNTRLLGHEHRLRAEPTRTQVIYA 286
           G N I      V+  H +YQ+P+    G  R+    H+L  EPT    I A
Sbjct: 417 GSNRIRSAILQVVCHHLDYQLPLAEAVGRERIHWEAHKLDLEPTSVADILA 467

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>IL1R1_RAT (Q02955) Interleukin-1 receptor type I precursor (IL-1R-1) (p80)|
           (CD121a antigen)
          Length = 576

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = -1

Query: 375 PIVFFPGNTRLLGHEHRLRAEPTRTQVIYACNVSPDFELLLAALWIGVQVEFDDP 211
           P++  P N         + A+P  T +   CNV+  F  L+   W G ++E+DDP
Sbjct: 229 PVIMSPRN-------ETMEADPGST-IQLICNVTGQFTDLVYWKWNGSEIEWDDP 275

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>NU153_RAT (P49791) Nuclear pore complex protein Nup153 (Nucleoporin Nup153)|
            (153 kDa nucleoporin)
          Length = 1468

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
 Frame = -2

Query: 476  SSTTATGSADMVLASITFTSDFPVFSSCTKNIRYPSSSSPETPGSLGTNTASEPNLPGPR 297
            SST AT S+  +  S T +S  PV +        P SSS    G+   ++ S+P L  P+
Sbjct: 1193 SSTPATSSSASIFGSSTSSSSPPVAAFVFGQASNPVSSS--AFGNSAESSTSQP-LLFPQ 1249

Query: 296  SYMPVTFPPTSSCFLP-LSGSACRSNLMIPVTF 201
               P T   T+S   P + G+   SN  +   F
Sbjct: 1250 DGKPATTSSTASAAPPFVFGTGASSNSTVSSGF 1282

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>RBF1_CAEEL (P41885) Rabphilin-1|
          Length = 1106

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 20/51 (39%), Positives = 24/51 (47%)
 Frame = -2

Query: 410 PVFSSCTKNIRYPSSSSPETPGSLGTNTASEPNLPGPRSYMPVTFPPTSSC 258
           P +   T N   P++SS  TP S GT        PG     P+T P TSSC
Sbjct: 336 PYYVPVTTNGTLPNASSAATPLS-GT--------PGGAGPQPMTMPSTSSC 377

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>NHL1_CAEEL (Q03601) RING finger protein nhl-1|
          Length = 974

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
 Frame = -2

Query: 488 TRFGSSTTATGSADMVLASITFTSDFP----VFSSCTKNIRYPSSSSPETPGSLGTNTAS 321
           T   SS T+  +AD V  S+  T   P    V ++ T     P+S  P  P S+     +
Sbjct: 423 TADSSSRTSPWAADRVTRSVEPTKSRPTSLIVPNTETPRTVSPASKPPLPPQSVERVERT 482

Query: 320 EPNLPGPRSYMPVTFPP 270
           E   P P   +P+  PP
Sbjct: 483 EDASPAPLPQLPIRKPP 499

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>RL2_SCHPO (P08093) 60S ribosomal protein L2 (K5) (K37) (KD4)|
          Length = 253

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = +1

Query: 250 GKKQLEVGGNVTGIYDLGPGRFGSEAVFVPKEPGVSGEEDDGYLIFFVHDENTGKSEVNV 429
           GK      GNV  + ++  G   S       + G  G     Y+I   HD +TGK+ V +
Sbjct: 90  GKNAALTVGNVLPVGEMPEGTIISNVEEKAGDRGALGRSSGNYVIIVGHDVDTGKTRVKL 149

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>HWP1_CANAL (P46593) Hyphal wall protein 1 (Cell elongation protein 2)|
          Length = 634

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
 Frame = -2

Query: 470 TTATGSADMVLASITFTSDFPVFSS-CTKNIRYPSSSSPETPGSLGTNTASEPN---LPG 303
           T+A+ + +  + + T  +  P  SS  T     P SS P T GS    T SE +      
Sbjct: 225 TSASTTPESSVPATTPNTSVPTTSSESTTPATSPESSVPVTSGSSILATTSESSSAPATT 284

Query: 302 PRSYMPVTFPPTSSCFLPLSGSACRSNLMIPVT 204
           P + +P T   T S   PL+ +      ++ VT
Sbjct: 285 PNTSVPTTTTETKSSSTPLTTTTEHDTTVVTVT 317


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,424,868
Number of Sequences: 219361
Number of extensions: 2066451
Number of successful extensions: 7671
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 7101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7644
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5253413348
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result