| Clone Name | bags28h03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|L11862.1|BLYVATP57A Hordeum vulgare vacuolar ATPase B subunit isoform mRNA, complete cds Length = 1923 Score = 333 bits (168), Expect = 1e-88 Identities = 170/171 (99%) Strand = Plus / Plus Query: 2 agtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138 agtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcc 197 Query: 62 caaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaag 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 198 caaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaag 257 Query: 122 ttctggaagttgatggtgaaaaggctgttgtgcangtcttcgaaggcactt 172 |||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 258 ttctggaagttgatggtgaaaaggctgttgtgcaggtcttcgaaggcactt 308
>gb|AF375052.1|AF375052 Oryza sativa vacuolar ATPase B subunit mRNA, complete cds Length = 1947 Score = 270 bits (136), Expect = 1e-69 Identities = 162/171 (94%) Strand = Plus / Plus Query: 2 agtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcc 61 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 206 agtacaggactgtttctggtgtggcaggacctctggttatcttggataaagtaaagggcc 265 Query: 62 caaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaag 121 |||| |||||||| ||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 266 caaagtaccaggaaattgtaaacatccgattgggagatggcaccactcgccgtggccaag 325 Query: 122 ttctggaagttgatggtgaaaaggctgttgtgcangtcttcgaaggcactt 172 ||||||||||||| |||||||||||||||||||| ||||| |||||||||| Sbjct: 326 ttctggaagttgacggtgaaaaggctgttgtgcaggtctttgaaggcactt 376
>dbj|AK099907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116A19, full insert sequence Length = 1940 Score = 270 bits (136), Expect = 1e-69 Identities = 162/171 (94%) Strand = Plus / Plus Query: 2 agtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcc 61 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 199 agtacaggactgtttctggtgtggcaggacctctggttatcttggataaagtaaagggcc 258 Query: 62 caaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaag 121 |||| |||||||| ||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 259 caaagtaccaggaaattgtaaacatccgattgggagatggcaccactcgccgtggccaag 318 Query: 122 ttctggaagttgatggtgaaaaggctgttgtgcangtcttcgaaggcactt 172 ||||||||||||| |||||||||||||||||||| ||||| |||||||||| Sbjct: 319 ttctggaagttgacggtgaaaaggctgttgtgcaggtctttgaaggcactt 369
>dbj|AK064802.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000D11, full insert sequence Length = 1933 Score = 270 bits (136), Expect = 1e-69 Identities = 162/171 (94%) Strand = Plus / Plus Query: 2 agtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcc 61 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 188 agtacaggactgtttctggtgtggcaggacctctggttatcttggataaagtaaagggcc 247 Query: 62 caaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaag 121 |||| |||||||| ||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 248 caaagtaccaggaaattgtaaacatccgattgggagatggcaccactcgccgtggccaag 307 Query: 122 ttctggaagttgatggtgaaaaggctgttgtgcangtcttcgaaggcactt 172 ||||||||||||| |||||||||||||||||||| ||||| |||||||||| Sbjct: 308 ttctggaagttgacggtgaaaaggctgttgtgcaggtctttgaaggcactt 358
>gb|L11873.1|BLYVATP57B Hordeum vulgare vacuolar ATPase B subunit mRNA, complete cds Length = 1778 Score = 198 bits (100), Expect = 4e-48 Identities = 153/171 (89%) Strand = Plus / Plus Query: 2 agtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcc 61 |||| ||||| || || ||||||||||| || ||||||| ||||||||||||||||||| Sbjct: 93 agtataggactgtctccggtgtggcagggccgttggttattttggacaaagtaaagggcc 152 Query: 62 caaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaag 121 |||| || ||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 153 caaagtatcaggagattgtgaacatccgattgggagatggcaccactcgtcgtggtcaag 212 Query: 122 ttctggaagttgatggtgaaaaggctgttgtgcangtcttcgaaggcactt 172 | || ||||||||||||||||| ||||||||||| ||||| ||||| |||| Sbjct: 213 tcctcgaagttgatggtgaaaaagctgttgtgcaggtctttgaaggtactt 263
>gb|AY104180.1| Zea mays PCO062733 mRNA sequence Length = 2013 Score = 190 bits (96), Expect = 9e-46 Identities = 152/171 (88%) Strand = Plus / Plus Query: 2 agtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcc 61 |||||||||| || ||||||||||| || ||||||||||||||||| ||||||||||||| Sbjct: 221 agtacaggactgtatctggtgtggccgggcctctggttatcttggataaagtaaagggcc 280 Query: 62 caaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaag 121 |||| ||||| || ||||||||||||||| | ||||||||||||||||| |||||||||| Sbjct: 281 caaagtaccaagaaattgtaaacatccgacttggagatggcaccactcgccgtggtcaag 340 Query: 122 ttctggaagttgatggtgaaaaggctgttgtgcangtcttcgaaggcactt 172 | || ||||||||||| ||||| ||||||||||| || || ||||| |||| Sbjct: 341 tccttgaagttgatggagaaaaagctgttgtgcaggtttttgaaggaactt 391
>gb|BT016637.1| Zea mays clone Contig470 mRNA sequence Length = 950 Score = 174 bits (88), Expect = 6e-41 Identities = 150/171 (87%) Strand = Plus / Plus Query: 2 agtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcc 61 |||||||||| || |||||||| || || |||||||| || ||||| ||||||||||||| Sbjct: 206 agtacaggactgtatctggtgttgctgggcctctggtcatattggataaagtaaagggcc 265 Query: 62 caaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaag 121 |||| ||||| || ||||||||||||||| | ||||||||||||| ||| |||||||||| Sbjct: 266 caaagtaccaagaaattgtaaacatccgacttggagatggcaccaatcgccgtggtcaag 325 Query: 122 ttctggaagttgatggtgaaaaggctgttgtgcangtcttcgaaggcactt 172 | |||||||||||||| ||||| ||||||||||| ||||| ||||| |||| Sbjct: 326 tcctggaagttgatggcgaaaaagctgttgtgcaggtctttgaaggaactt 376
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 159 bits (80), Expect = 3e-36 Identities = 95/100 (95%) Strand = Plus / Minus Query: 56 agggcccaaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtg 115 |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 21619431 agggcccaaagtaccaggaaattgtaaacatccgattgggagatggcaccactcgccgtg 21619372 Query: 116 gtcaagttctggaagttgatggtgaaaaggctgttgtgca 155 | ||||||||||||||||| |||||||||||||||||||| Sbjct: 21619371 gccaagttctggaagttgacggtgaaaaggctgttgtgca 21619332 Score = 97.6 bits (49), Expect = 1e-17 Identities = 55/57 (96%) Strand = Plus / Minus Query: 2 agtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagg 58 |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 21619575 agtacaggactgtttctggtgtggcaggacctctggttatcttggataaagtaaagg 21619519
>dbj|AP005458.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0567G03 Length = 196834 Score = 159 bits (80), Expect = 3e-36 Identities = 95/100 (95%) Strand = Plus / Minus Query: 56 agggcccaaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtg 115 |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 176615 agggcccaaagtaccaggaaattgtaaacatccgattgggagatggcaccactcgccgtg 176556 Query: 116 gtcaagttctggaagttgatggtgaaaaggctgttgtgca 155 | ||||||||||||||||| |||||||||||||||||||| Sbjct: 176555 gccaagttctggaagttgacggtgaaaaggctgttgtgca 176516 Score = 97.6 bits (49), Expect = 1e-17 Identities = 55/57 (96%) Strand = Plus / Minus Query: 2 agtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagg 58 |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 176759 agtacaggactgtttctggtgtggcaggacctctggttatcttggataaagtaaagg 176703
>dbj|AP005471.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0062E01 Length = 161804 Score = 159 bits (80), Expect = 3e-36 Identities = 95/100 (95%) Strand = Plus / Minus Query: 56 agggcccaaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtg 115 |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 18362 agggcccaaagtaccaggaaattgtaaacatccgattgggagatggcaccactcgccgtg 18303 Query: 116 gtcaagttctggaagttgatggtgaaaaggctgttgtgca 155 | ||||||||||||||||| |||||||||||||||||||| Sbjct: 18302 gccaagttctggaagttgacggtgaaaaggctgttgtgca 18263 Score = 97.6 bits (49), Expect = 1e-17 Identities = 55/57 (96%) Strand = Plus / Minus Query: 2 agtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagg 58 |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 18506 agtacaggactgtttctggtgtggcaggacctctggttatcttggataaagtaaagg 18450
>dbj|AB055106.1| Oryza sativa (japonica cultivar-group) V-ATPase B gene for vacuolar ATPase B subunit, complete cds Length = 6033 Score = 159 bits (80), Expect = 3e-36 Identities = 95/100 (95%) Strand = Plus / Plus Query: 56 agggcccaaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtg 115 |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 1612 agggcccaaagtaccaggaaattgtaaacatccgattgggagatggcaccactcgccgtg 1671 Query: 116 gtcaagttctggaagttgatggtgaaaaggctgttgtgca 155 | ||||||||||||||||| |||||||||||||||||||| Sbjct: 1672 gccaagttctggaagttgacggtgaaaaggctgttgtgca 1711 Score = 97.6 bits (49), Expect = 1e-17 Identities = 55/57 (96%) Strand = Plus / Plus Query: 2 agtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagg 58 |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1468 agtacaggactgtttctggtgtggcaggacctctggttatcttggataaagtaaagg 1524
>dbj|AK059850.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-G02, full insert sequence Length = 1178 Score = 141 bits (71), Expect = 8e-31 Identities = 136/158 (86%), Gaps = 10/158 (6%) Strand = Plus / Plus Query: 16 tctggtgtggcaggacctctggttatcttggacaaagtaaagggcccaaaataccaggag 75 ||||||||| ||||||||||| |||||||||| ||||||||| ||| |||| Sbjct: 575 tctggtgtgccaggacctctgtttatcttggataaagtaaag---------tactaggaa 625 Query: 76 attgtaaacatccgattgggagatggcaccactcggcgtggtcaagttctggaagttgat 135 |||||||||||||||||||||||||| ||||||||| |||| ||| |||||||||||||| Sbjct: 626 attgtaaacatccgattgggagatggaaccactcggtgtggccaaattctggaagttgat 685 Query: 136 ggtgaaa-aggctgttgtgcangtcttcgaaggcactt 172 ||||||| ||||||||||||| ||||| |||| ||||| Sbjct: 686 ggtgaaagaggctgttgtgcaggtctttgaagacactt 723
>gb|AF220611.1|AF220611 Nicotiana tabacum vacuolar H+-ATPase B subunit mRNA, complete cds Length = 1910 Score = 131 bits (66), Expect = 8e-28 Identities = 117/134 (87%) Strand = Plus / Plus Query: 19 ggtgtggcaggacctctggttatcttggacaaagtaaagggcccaaaataccaggagatt 78 ||||| || ||||| ||||||||| | |||||||| ||||| || || |||||||||||| Sbjct: 106 ggtgttgctggaccgctggttatccttgacaaagttaagggacccaagtaccaggagatt 165 Query: 79 gtaaacatccgattgggagatggcaccactcggcgtggtcaagttctggaagttgatggt 138 || ||||| || ||||||||||| || ||||| ||||| ||||||||||||||||||||| Sbjct: 166 gttaacattcggttgggagatggaactactcgacgtggacaagttctggaagttgatggt 225 Query: 139 gaaaaggctgttgt 152 ||||| |||||||| Sbjct: 226 gaaaaagctgttgt 239
>dbj|AK103104.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118O17, full insert sequence Length = 1876 Score = 131 bits (66), Expect = 8e-28 Identities = 125/145 (86%), Gaps = 10/145 (6%) Strand = Plus / Plus Query: 16 tctggtgtggcaggacctctggttatcttggacaaagtaaagggcccaaaataccaggag 75 ||||||||| ||||||||||| |||||||||| ||||||||| ||| |||| Sbjct: 1036 tctggtgtgccaggacctctgtttatcttggataaagtaaag---------tactaggaa 1086 Query: 76 attgtaaacatccgattgggagatggcaccactcggcgtggtcaagttctggaagttgat 135 |||||||||||||||||||||||||| ||||||||| |||| ||| |||||||||||||| Sbjct: 1087 attgtaaacatccgattgggagatggaaccactcggtgtggccaaattctggaagttgat 1146 Query: 136 ggtgaaa-aggctgttgtgcangtc 159 ||||||| ||||||||||||| ||| Sbjct: 1147 ggtgaaagaggctgttgtgcaggtc 1171
>dbj|AK100817.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023122D13, full insert sequence Length = 2242 Score = 129 bits (65), Expect = 3e-27 Identities = 101/112 (90%), Gaps = 1/112 (0%) Strand = Plus / Plus Query: 62 caaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaag 121 |||| ||| |||| |||||||||||||||||||||||||| ||||||||| |||| ||| Sbjct: 1483 caaagtactaggaaattgtaaacatccgattgggagatggaaccactcggtgtggccaaa 1542 Query: 122 ttctggaagttgatggtgaaa-aggctgttgtgcangtcttcgaaggcactt 172 ||||||||||||||||||||| ||||||||||||| ||||| |||| ||||| Sbjct: 1543 ttctggaagttgatggtgaaagaggctgttgtgcaggtctttgaagacactt 1594 Score = 61.9 bits (31), Expect = 6e-07 Identities = 40/43 (93%) Strand = Plus / Plus Query: 16 tctggtgtggcaggacctctggttatcttggacaaagtaaagg 58 ||||||||| ||||||||||| |||||||||| |||||||||| Sbjct: 1340 tctggtgtgccaggacctctgtttatcttggataaagtaaagg 1382
>gb|AC097175.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1119_H02, complete sequence Length = 138584 Score = 119 bits (60), Expect = 3e-24 Identities = 90/99 (90%), Gaps = 1/99 (1%) Strand = Plus / Minus Query: 62 caaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaag 121 |||| ||| |||| |||||||||||||||||||||||||| ||||||||| |||| ||| Sbjct: 51562 caaagtactaggaaattgtaaacatccgattgggagatggaaccactcggtgtggccaaa 51503 Query: 122 ttctggaagttgatggtgaaa-aggctgttgtgcangtc 159 ||||||||||||||||||||| ||||||||||||| ||| Sbjct: 51502 ttctggaagttgatggtgaaagaggctgttgtgcaggtc 51464 Score = 61.9 bits (31), Expect = 6e-07 Identities = 40/43 (93%) Strand = Plus / Minus Query: 16 tctggtgtggcaggacctctggttatcttggacaaagtaaagg 58 ||||||||| ||||||||||| |||||||||| |||||||||| Sbjct: 51705 tctggtgtgccaggacctctgtttatcttggataaagtaaagg 51663
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 119 bits (60), Expect = 3e-24 Identities = 90/99 (90%), Gaps = 1/99 (1%) Strand = Plus / Minus Query: 62 caaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaag 121 |||| ||| |||| |||||||||||||||||||||||||| ||||||||| |||| ||| Sbjct: 23847727 caaagtactaggaaattgtaaacatccgattgggagatggaaccactcggtgtggccaaa 23847668 Query: 122 ttctggaagttgatggtgaaa-aggctgttgtgcangtc 159 ||||||||||||||||||||| ||||||||||||| ||| Sbjct: 23847667 ttctggaagttgatggtgaaagaggctgttgtgcaggtc 23847629 Score = 61.9 bits (31), Expect = 6e-07 Identities = 40/43 (93%) Strand = Plus / Minus Query: 16 tctggtgtggcaggacctctggttatcttggacaaagtaaagg 58 ||||||||| ||||||||||| |||||||||| |||||||||| Sbjct: 23847870 tctggtgtgccaggacctctgtttatcttggataaagtaaagg 23847828
>dbj|AB055105.1| Oryza sativa (japonica cultivar-group) V-ATPase B pseudogene for vacuolar ATPase B subunit Length = 4116 Score = 119 bits (60), Expect = 3e-24 Identities = 90/99 (90%), Gaps = 1/99 (1%) Strand = Plus / Plus Query: 62 caaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaag 121 |||| ||| |||| |||||||||||||||||||||||||| ||||||||| |||| ||| Sbjct: 1561 caaagtactaggaaattgtaaacatccgattgggagatggaaccactcggtgtggccaaa 1620 Query: 122 ttctggaagttgatggtgaaa-aggctgttgtgcangtc 159 ||||||||||||||||||||| ||||||||||||| ||| Sbjct: 1621 ttctggaagttgatggtgaaagaggctgttgtgcaggtc 1659 Score = 61.9 bits (31), Expect = 6e-07 Identities = 40/43 (93%) Strand = Plus / Plus Query: 16 tctggtgtggcaggacctctggttatcttggacaaagtaaagg 58 ||||||||| ||||||||||| |||||||||| |||||||||| Sbjct: 1418 tctggtgtgccaggacctctgtttatcttggataaagtaaagg 1460
>gb|BT013016.1| Lycopersicon esculentum clone 114254F, mRNA sequence Length = 1949 Score = 93.7 bits (47), Expect = 2e-16 Identities = 92/107 (85%) Strand = Plus / Plus Query: 46 gacaaagtaaagggcccaaaataccaggagattgtaaacatccgattgggagatggcacc 105 |||||||| ||||| || || || ||||||||||| ||||| || ||||||||||| || Sbjct: 175 gacaaagtgaagggacccaagtatcaggagattgttaacattcgtttgggagatggaact 234 Query: 106 actcggcgtggtcaagttctggaagttgatggtgaaaaggctgttgt 152 || |||||||| |||||||| ||||||||||||||||| || ||||| Sbjct: 235 acccggcgtggacaagttcttgaagttgatggtgaaaaagcagttgt 281
>ref|NM_191702.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1467 Score = 85.7 bits (43), Expect = 4e-14 Identities = 135/166 (81%) Strand = Plus / Plus Query: 2 agtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcc 61 ||||||||||||| ||||| || || || ||||| || || | || ||||| ||||| | Sbjct: 59 agtacaggacagtctctggagttgctggtcctctagtcattcttgataaagtgaagggtc 118 Query: 62 caaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaag 121 | |||||||| || ||||| || || ||||| ||||||||||| ||| |||||||||||| Sbjct: 119 ctaaataccaagaaattgtcaatatacgattaggagatggcacaactaggcgtggtcaag 178 Query: 122 ttctggaagttgatggtgaaaaggctgttgtgcangtcttcgaagg 167 | || ||||| ||||| || || |||||||| || || |||||||| Sbjct: 179 tgcttgaagtcgatggggagaaagctgttgttcaggttttcgaagg 224
>dbj|AK103899.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150J04, full insert sequence Length = 1893 Score = 85.7 bits (43), Expect = 4e-14 Identities = 135/166 (81%) Strand = Plus / Plus Query: 2 agtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcc 61 ||||||||||||| ||||| || || || ||||| || || | || ||||| ||||| | Sbjct: 156 agtacaggacagtctctggagttgctggtcctctagtcattcttgataaagtgaagggtc 215 Query: 62 caaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaag 121 | |||||||| || ||||| || || ||||| ||||||||||| ||| |||||||||||| Sbjct: 216 ctaaataccaagaaattgtcaatatacgattaggagatggcacaactaggcgtggtcaag 275 Query: 122 ttctggaagttgatggtgaaaaggctgttgtgcangtcttcgaagg 167 | || ||||| ||||| || || |||||||| || || |||||||| Sbjct: 276 tgcttgaagtcgatggggagaaagctgttgttcaggttttcgaagg 321
>emb|AJ438590.1|MCR438590 Mesembryanthemum crystallinum mRNA for vacuolar ATPase subunit B (vha-B gene) Length = 1962 Score = 75.8 bits (38), Expect = 4e-11 Identities = 119/146 (81%) Strand = Plus / Plus Query: 4 tacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagggccca 63 ||||| ||||| || ||||| || || |||||||||||| | || ||||| ||||| || Sbjct: 134 tacagaacagtctcaggtgttgctgggcctctggttatcctagaaaaagttaagggacct 193 Query: 64 aaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagtt 123 ||||| || || ||||| || || || ||||||||||| || ||||| | |||||||| Sbjct: 194 aaatatcaagaaattgtcaatattcgtttgggagatggaacaactcgtagaggtcaagtc 253 Query: 124 ctggaagttgatggtgaaaaggctgt 149 |||||||||||||||| |||||||| Sbjct: 254 ttggaagttgatggtgagaaggctgt 279
>ref|NM_120012.3| Arabidopsis thaliana ATP binding / hydrogen-exporting ATPase, phosphorylative mechanism / hydrogen-transporting ATP synthase, rotational mechanism /> AT4G38510 transcript variant AT4G38510.1 mRNA, complete cds Length = 2347 Score = 71.9 bits (36), Expect = 6e-10 Identities = 114/140 (81%) Strand = Plus / Plus Query: 13 gtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcccaaaataccag 72 ||||||||||| || |||||||| || ||| | || ||||| ||||| || |||||||| Sbjct: 116 gtttctggtgttgcgggacctctcgtcatccttgaaaaagtcaaggggcctaaataccaa 175 Query: 73 gagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagttctggaagtt 132 || ||||| || ||||| | || ||||| || || || |||||||||||||| |||||| Sbjct: 176 gaaattgtcaatatccgtcttggggatggaactacccgacgtggtcaagttctcgaagtt 235 Query: 133 gatggtgaaaaggctgttgt 152 ||||| || || |||||||| Sbjct: 236 gatggagagaaagctgttgt 255
>ref|NM_001036731.1| Arabidopsis thaliana ATP binding / hydrogen-exporting ATPase, phosphorylative mechanism / hydrogen-transporting ATP synthase, rotational mechanism /> AT4G38510 transcript variant AT4G38510.4 mRNA, complete cds Length = 2386 Score = 71.9 bits (36), Expect = 6e-10 Identities = 114/140 (81%) Strand = Plus / Plus Query: 13 gtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcccaaaataccag 72 ||||||||||| || |||||||| || ||| | || ||||| ||||| || |||||||| Sbjct: 155 gtttctggtgttgcgggacctctcgtcatccttgaaaaagtcaaggggcctaaataccaa 214 Query: 73 gagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagttctggaagtt 132 || ||||| || ||||| | || ||||| || || || |||||||||||||| |||||| Sbjct: 215 gaaattgtcaatatccgtcttggggatggaactacccgacgtggtcaagttctcgaagtt 274 Query: 133 gatggtgaaaaggctgttgt 152 ||||| || || |||||||| Sbjct: 275 gatggagagaaagctgttgt 294
>ref|NM_202978.1| Arabidopsis thaliana ATP binding / hydrogen-exporting ATPase, phosphorylative mechanism / hydrogen-transporting ATP synthase, rotational mechanism /> AT4G38510 transcript variant AT4G38510.2 mRNA, complete cds Length = 2377 Score = 71.9 bits (36), Expect = 6e-10 Identities = 114/140 (81%) Strand = Plus / Plus Query: 13 gtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcccaaaataccag 72 ||||||||||| || |||||||| || ||| | || ||||| ||||| || |||||||| Sbjct: 146 gtttctggtgttgcgggacctctcgtcatccttgaaaaagtcaaggggcctaaataccaa 205 Query: 73 gagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagttctggaagtt 132 || ||||| || ||||| | || ||||| || || || |||||||||||||| |||||| Sbjct: 206 gaaattgtcaatatccgtcttggggatggaactacccgacgtggtcaagttctcgaagtt 265 Query: 133 gatggtgaaaaggctgttgt 152 ||||| || || |||||||| Sbjct: 266 gatggagagaaagctgttgt 285
>ref|NM_001036730.1| Arabidopsis thaliana ATP binding / hydrogen-exporting ATPase, phosphorylative mechanism / hydrogen-transporting ATP synthase, rotational mechanism /> AT4G38510 transcript variant AT4G38510.3 mRNA, complete cds Length = 2485 Score = 71.9 bits (36), Expect = 6e-10 Identities = 114/140 (81%) Strand = Plus / Plus Query: 13 gtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcccaaaataccag 72 ||||||||||| || |||||||| || ||| | || ||||| ||||| || |||||||| Sbjct: 254 gtttctggtgttgcgggacctctcgtcatccttgaaaaagtcaaggggcctaaataccaa 313 Query: 73 gagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagttctggaagtt 132 || ||||| || ||||| | || ||||| || || || |||||||||||||| |||||| Sbjct: 314 gaaattgtcaatatccgtcttggggatggaactacccgacgtggtcaagttctcgaagtt 373 Query: 133 gatggtgaaaaggctgttgt 152 ||||| || || |||||||| Sbjct: 374 gatggagagaaagctgttgt 393
>gb|AY059167.1| Arabidopsis thaliana AT4g38510/F20M13_70 mRNA, complete cds Length = 1464 Score = 71.9 bits (36), Expect = 6e-10 Identities = 114/140 (81%) Strand = Plus / Plus Query: 13 gtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcccaaaataccag 72 ||||||||||| || |||||||| || ||| | || ||||| ||||| || |||||||| Sbjct: 67 gtttctggtgttgcgggacctctcgtcatccttgaaaaagtcaaggggcctaaataccaa 126 Query: 73 gagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagttctggaagtt 132 || ||||| || ||||| | || ||||| || || || |||||||||||||| |||||| Sbjct: 127 gaaattgtcaatatccgtcttggggatggaactacccgacgtggtcaagttctcgaagtt 186 Query: 133 gatggtgaaaaggctgttgt 152 ||||| || || |||||||| Sbjct: 187 gatggagagaaagctgttgt 206
>gb|AY039518.1| Arabidopsis thaliana AT4g38510/F20M13_70 mRNA, complete cds Length = 1862 Score = 71.9 bits (36), Expect = 6e-10 Identities = 114/140 (81%) Strand = Plus / Plus Query: 13 gtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcccaaaataccag 72 ||||||||||| || |||||||| || ||| | || ||||| ||||| || |||||||| Sbjct: 146 gtttctggtgttgcgggacctctcgtcatccttgaaaaagtcaaggggcctaaataccaa 205 Query: 73 gagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagttctggaagtt 132 || ||||| || ||||| | || ||||| || || || |||||||||||||| |||||| Sbjct: 206 gaaattgtcaatatccgtcttggggatggaactacccgacgtggtcaagttctcgaagtt 265 Query: 133 gatggtgaaaaggctgttgt 152 ||||| || || |||||||| Sbjct: 266 gatggagagaaagctgttgt 285
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 65.9 bits (33), Expect = 4e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 64 aaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagtt 123 |||||||| || ||||| || || ||||| ||||||||||| ||| ||||||||||||| Sbjct: 29531413 aaataccaagaaattgtcaatatacgattaggagatggcacaactaggcgtggtcaagtg 29531472 Query: 124 ctggaagttgatggtgaaaaggctgttgt 152 || ||||| ||||| || || |||||||| Sbjct: 29531473 cttgaagtcgatggggagaaagctgttgt 29531501
>dbj|AP003410.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1142C05 Length = 151457 Score = 65.9 bits (33), Expect = 4e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 64 aaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagtt 123 |||||||| || ||||| || || ||||| ||||||||||| ||| ||||||||||||| Sbjct: 1233 aaataccaagaaattgtcaatatacgattaggagatggcacaactaggcgtggtcaagtg 1292 Query: 124 ctggaagttgatggtgaaaaggctgttgt 152 || ||||| ||||| || || |||||||| Sbjct: 1293 cttgaagtcgatggggagaaagctgttgt 1321
>dbj|AP002901.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456F08 Length = 156850 Score = 65.9 bits (33), Expect = 4e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 64 aaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagtt 123 |||||||| || ||||| || || ||||| ||||||||||| ||| ||||||||||||| Sbjct: 97687 aaataccaagaaattgtcaatatacgattaggagatggcacaactaggcgtggtcaagtg 97746 Query: 124 ctggaagttgatggtgaaaaggctgttgt 152 || ||||| ||||| || || |||||||| Sbjct: 97747 cttgaagtcgatggggagaaagctgttgt 97775
>ref|NM_106251.2| Arabidopsis thaliana ATP binding / hydrogen-exporting ATPase, phosphorylative mechanism / hydrogen-transporting ATP synthase, rotational mechanism /> AT1G76030 mRNA, complete cds Length = 1840 Score = 63.9 bits (32), Expect = 1e-07 Identities = 124/155 (80%) Strand = Plus / Plus Query: 13 gtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcccaaaataccag 72 ||||||||||| || ||||| |||| || | |||||||| ||||| ||||| |||||| Sbjct: 170 gtttctggtgttgctggaccattggtcattcttgacaaagtgaagggtccaaagtaccag 229 Query: 73 gagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagttctggaagtt 132 |||||||| || || || || |||||||| | || | |||||||| ||| |||||||| Sbjct: 230 gagattgttaatattcgcttaggagatggatcaacgagacgtggtcaggttttggaagtt 289 Query: 133 gatggtgaaaaggctgttgtgcangtcttcgaagg 167 ||||| || || || |||||||| || || ||||| Sbjct: 290 gatggcgagaaagcagttgtgcaggtttttgaagg 324
>gb|AY125532.1| Arabidopsis thaliana At1g76030/T4O12_24 mRNA, complete cds Length = 1461 Score = 63.9 bits (32), Expect = 1e-07 Identities = 124/155 (80%) Strand = Plus / Plus Query: 13 gtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcccaaaataccag 72 ||||||||||| || ||||| |||| || | |||||||| ||||| ||||| |||||| Sbjct: 64 gtttctggtgttgctggaccattggtcattcttgacaaagtgaagggtccaaagtaccag 123 Query: 73 gagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagttctggaagtt 132 |||||||| || || || || |||||||| | || | |||||||| ||| |||||||| Sbjct: 124 gagattgttaatattcgcttaggagatggatcaacgagacgtggtcaggttttggaagtt 183 Query: 133 gatggtgaaaaggctgttgtgcangtcttcgaagg 167 ||||| || || || |||||||| || || ||||| Sbjct: 184 gatggcgagaaagcagttgtgcaggtttttgaagg 218
>gb|AY094424.1| Arabidopsis thaliana At1g76030/T4O12_24 mRNA, complete cds Length = 1839 Score = 63.9 bits (32), Expect = 1e-07 Identities = 124/155 (80%) Strand = Plus / Plus Query: 13 gtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcccaaaataccag 72 ||||||||||| || ||||| |||| || | |||||||| ||||| ||||| |||||| Sbjct: 170 gtttctggtgttgctggaccattggtcattcttgacaaagtgaagggtccaaagtaccag 229 Query: 73 gagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagttctggaagtt 132 |||||||| || || || || |||||||| | || | |||||||| ||| |||||||| Sbjct: 230 gagattgttaatattcgcttaggagatggatcaacgagacgtggtcaggttttggaagtt 289 Query: 133 gatggtgaaaaggctgttgtgcangtcttcgaagg 167 ||||| || || || |||||||| || || ||||| Sbjct: 290 gatggcgagaaagcagttgtgcaggtttttgaagg 324
>gb|AC006234.4| Arabidopsis thaliana chromosome 2 clone F5H14 map mi148, complete sequence Length = 129667 Score = 63.9 bits (32), Expect = 1e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 97 gatggcaccactcggcgtggtcaagttctggaagttgatggtgaaaaggctgttgt 152 ||||| || ||||| |||||||||||||| ||||||||||| || ||||||||||| Sbjct: 35329 gatggaactactcgacgtggtcaagttcttgaagttgatggcgagaaggctgttgt 35384
>gb|J04185.1|ATHATPASE Arabidopsis thaliana nucleotide-binding subunit of vacuolar ATPase mRNA, complete cds Length = 1863 Score = 63.9 bits (32), Expect = 1e-07 Identities = 124/155 (80%) Strand = Plus / Plus Query: 13 gtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcccaaaataccag 72 ||||||||||| || ||||| |||| || | |||||||| ||||| ||||| |||||| Sbjct: 193 gtttctggtgttgctggaccattggtcattcttgacaaagtgaagggtccaaagtaccag 252 Query: 73 gagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagttctggaagtt 132 |||||||| || || || || |||||||| | || | |||||||| ||| |||||||| Sbjct: 253 gagattgttaatattcgcttaggagatggatcaacgagacgtggtcaggttttggaagtt 312 Query: 133 gatggtgaaaaggctgttgtgcangtcttcgaagg 167 ||||| || || || |||||||| || || ||||| Sbjct: 313 gatggcgagaaagcagttgtgcaggtttttgaagg 347
>gb|AY045609.1| Arabidopsis thaliana AT4g38510/F20M13_70 mRNA, complete cds Length = 1829 Score = 58.0 bits (29), Expect = 9e-06 Identities = 113/140 (80%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 13 gtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcccaaaataccag 72 ||||||||||| || |||||||| || ||| | || ||||| ||||| || |||||||| Sbjct: 115 gtttctggtgttgcgggacctctcgtcatccttgaaaaagtcaaggggcctaaatacca- 173 Query: 73 gagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagttctggaagtt 132 | ||||| || ||||| | || ||||| || || || |||||||||||||| |||||| Sbjct: 174 -aaattgtcaatatccgtcttggggatggaactacccgacgtggtcaagttctcgaagtt 232 Query: 133 gatggtgaaaaggctgttgt 152 ||||| || || |||||||| Sbjct: 233 gatggagagaaagctgttgt 252
>ref|NM_101877.2| Arabidopsis thaliana ATP binding / hydrogen-transporting ATP synthase, rotational mechanism / hydrogen-transporting ATPase, rotational mechanism AT1G20260 transcript variant AT1G20260.1 mRNA, complete cds Length = 1815 Score = 52.0 bits (26), Expect = 6e-04 Identities = 62/74 (83%) Strand = Plus / Plus Query: 28 ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgtaaacatc 87 |||||| |||| ||| | |||||||| ||||| ||||| |||||||||||||| || || Sbjct: 217 ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgttaatatt 276 Query: 88 cgattgggagatgg 101 || || |||||||| Sbjct: 277 cgcttaggagatgg 290
>ref|NM_202142.1| Arabidopsis thaliana ATP binding / hydrogen-exporting ATPase, phosphorylative mechanism / hydrogen-transporting ATP synthase, rotational mechanism /> AT1G20260 transcript variant AT1G20260.2 mRNA, complete cds Length = 1927 Score = 52.0 bits (26), Expect = 6e-04 Identities = 62/74 (83%) Strand = Plus / Plus Query: 28 ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgtaaacatc 87 |||||| |||| ||| | |||||||| ||||| ||||| |||||||||||||| || || Sbjct: 217 ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgttaatatt 276 Query: 88 cgattgggagatgg 101 || || |||||||| Sbjct: 277 cgcttaggagatgg 290
>gb|BT000150.1| Arabidopsis thaliana Unknown protein (At1g20260) mRNA, complete cds Length = 1541 Score = 52.0 bits (26), Expect = 6e-04 Identities = 62/74 (83%) Strand = Plus / Plus Query: 28 ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgtaaacatc 87 |||||| |||| ||| | |||||||| ||||| ||||| |||||||||||||| || || Sbjct: 79 ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgttaatatt 138 Query: 88 cgattgggagatgg 101 || || |||||||| Sbjct: 139 cgcttaggagatgg 152
>gb|AY062616.1| Arabidopsis thaliana Unknown protein (F14O10.13) mRNA, complete cds Length = 1816 Score = 52.0 bits (26), Expect = 6e-04 Identities = 62/74 (83%) Strand = Plus / Plus Query: 28 ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgtaaacatc 87 |||||| |||| ||| | |||||||| ||||| ||||| |||||||||||||| || || Sbjct: 217 ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgttaatatt 276 Query: 88 cgattgggagatgg 101 || || |||||||| Sbjct: 277 cgcttaggagatgg 290
>emb|BX818393.1|CNS0AAXF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL76ZG09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1737 Score = 52.0 bits (26), Expect = 6e-04 Identities = 62/74 (83%) Strand = Plus / Plus Query: 28 ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgtaaacatc 87 |||||| |||| ||| | |||||||| ||||| ||||| |||||||||||||| || || Sbjct: 182 ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgttaatatt 241 Query: 88 cgattgggagatgg 101 || || |||||||| Sbjct: 242 cgcttaggagatgg 255
>dbj|AK176750.1| Arabidopsis thaliana mRNA for vacuolar-type H+-ATPase subunit B3 (VHA-B3), complete cds, clone: RAFL25-28-P20 Length = 1890 Score = 52.0 bits (26), Expect = 6e-04 Identities = 62/74 (83%) Strand = Plus / Plus Query: 28 ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgtaaacatc 87 |||||| |||| ||| | |||||||| ||||| ||||| |||||||||||||| || || Sbjct: 195 ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgttaatatt 254 Query: 88 cgattgggagatgg 101 || || |||||||| Sbjct: 255 cgcttaggagatgg 268
>dbj|AK176641.1| Arabidopsis thaliana mRNA for vacuolar-type H+-ATPase subunit B3 (VHA-B3), complete cds, clone: RAFL25-17-J11 Length = 1890 Score = 52.0 bits (26), Expect = 6e-04 Identities = 62/74 (83%) Strand = Plus / Plus Query: 28 ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgtaaacatc 87 |||||| |||| ||| | |||||||| ||||| ||||| |||||||||||||| || || Sbjct: 195 ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgttaatatt 254 Query: 88 cgattgggagatgg 101 || || |||||||| Sbjct: 255 cgcttaggagatgg 268
>dbj|AK176915.1| Arabidopsis thaliana mRNA for vacuolar-type H+-ATPase subunit B3 (VHA-B3), complete cds, clone: RAFL25-49-G23 Length = 1897 Score = 52.0 bits (26), Expect = 6e-04 Identities = 62/74 (83%) Strand = Plus / Plus Query: 28 ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgtaaacatc 87 |||||| |||| ||| | |||||||| ||||| ||||| |||||||||||||| || || Sbjct: 231 ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgttaatatt 290 Query: 88 cgattgggagatgg 101 || || |||||||| Sbjct: 291 cgcttaggagatgg 304
>dbj|AK176408.1| Arabidopsis thaliana mRNA for vacuolar-type H+-ATPase subunit B3 (VHA-B3), complete cds, clone: RAFL24-13-A20 Length = 1897 Score = 52.0 bits (26), Expect = 6e-04 Identities = 62/74 (83%) Strand = Plus / Plus Query: 28 ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgtaaacatc 87 |||||| |||| ||| | |||||||| ||||| ||||| |||||||||||||| || || Sbjct: 231 ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgttaatatt 290 Query: 88 cgattgggagatgg 101 || || |||||||| Sbjct: 291 cgcttaggagatgg 304
>dbj|AK175727.1| Arabidopsis thaliana mRNA for vacuolar-type H+-ATPase subunit B3 (VHA-B3), complete cds, clone: RAFL22-27-D19 Length = 1794 Score = 52.0 bits (26), Expect = 6e-04 Identities = 62/74 (83%) Strand = Plus / Plus Query: 28 ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgtaaacatc 87 |||||| |||| ||| | |||||||| ||||| ||||| |||||||||||||| || || Sbjct: 197 ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgttaatatt 256 Query: 88 cgattgggagatgg 101 || || |||||||| Sbjct: 257 cgcttaggagatgg 270
>dbj|AK175169.1| Arabidopsis thaliana mRNA for vacuolar-type H+-ATPase subunit B3 (VHA-B3), complete cds, clone: RAFL21-58-M18 Length = 1872 Score = 52.0 bits (26), Expect = 6e-04 Identities = 62/74 (83%) Strand = Plus / Plus Query: 28 ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgtaaacatc 87 |||||| |||| ||| | |||||||| ||||| ||||| |||||||||||||| || || Sbjct: 205 ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgttaatatt 264 Query: 88 cgattgggagatgg 101 || || |||||||| Sbjct: 265 cgcttaggagatgg 278
>dbj|AB024277.1| Citrus unshiu mRNA for vacuolar H+-ATPase B subunit, complete cds Length = 1899 Score = 52.0 bits (26), Expect = 6e-04 Identities = 109/137 (79%) Strand = Plus / Plus Query: 31 cctctggttatcttggacaaagtaaagggcccaaaataccaggagattgtaaacatccga 90 ||||| |||||| | || ||||| ||||| || ||||| | |||||||| || || || Sbjct: 144 cctctagttatccttgataaagtcaagggacccaaatattatgagattgtcaatattcgg 203 Query: 91 ttgggagatggcaccactcggcgtggtcaagttctggaagttgatggtgaaaaggctgtt 150 ||||||||||| || | || |||||||| || || ||||||||||| || || |||||| Sbjct: 204 ttgggagatggaacaatgcgacgtggtcaggtcctagaagttgatggagagaaagctgtt 263 Query: 151 gtgcangtcttcgaagg 167 || || ||||| ||||| Sbjct: 264 gttcaggtctttgaagg 280
>emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 89 Length = 199789 Score = 50.1 bits (25), Expect = 0.002 Identities = 37/41 (90%) Strand = Plus / Minus Query: 112 cgtggtcaagttctggaagttgatggtgaaaaggctgttgt 152 |||||||||||||| ||||||||||| || || |||||||| Sbjct: 123367 cgtggtcaagttctcgaagttgatggagagaaagctgttgt 123327
>emb|AL035539.1|ATF22I13 Arabidopsis thaliana DNA chromosome 4, BAC clone F22I13 (ESSA project) Length = 93760 Score = 50.1 bits (25), Expect = 0.002 Identities = 37/41 (90%) Strand = Plus / Minus Query: 112 cgtggtcaagttctggaagttgatggtgaaaaggctgttgt 152 |||||||||||||| ||||||||||| || || |||||||| Sbjct: 82409 cgtggtcaagttctcgaagttgatggagagaaagctgttgt 82369
>gb|AC069558.5|AC069558 Genomic Sequence For Arabidopsis thaliana Clone T5G13 From Chromosome IV, complete sequence Length = 107740 Score = 50.1 bits (25), Expect = 0.002 Identities = 37/41 (90%) Strand = Plus / Plus Query: 112 cgtggtcaagttctggaagttgatggtgaaaaggctgttgt 152 |||||||||||||| ||||||||||| || || |||||||| Sbjct: 42160 cgtggtcaagttctcgaagttgatggagagaaagctgttgt 42200
>emb|AL035540.1|ATF20M13 Arabidopsis thaliana DNA chromosome 4, BAC clone F20M13 (ESSA project) Length = 91938 Score = 50.1 bits (25), Expect = 0.002 Identities = 37/41 (90%) Strand = Plus / Minus Query: 112 cgtggtcaagttctggaagttgatggtgaaaaggctgttgt 152 |||||||||||||| ||||||||||| || || |||||||| Sbjct: 24308 cgtggtcaagttctcgaagttgatggagagaaagctgttgt 24268
>gb|U07052.1|GHU07052 Gossypium hirsutum vacuolar H+-ATPase subunit B mRNA, complete cds Length = 2047 Score = 50.1 bits (25), Expect = 0.002 Identities = 37/41 (90%) Strand = Plus / Plus Query: 112 cgtggtcaagttctggaagttgatggtgaaaaggctgttgt 152 ||||||||||| || ||||||||||| ||||| |||||||| Sbjct: 309 cgtggtcaagtccttgaagttgatggagaaaaagctgttgt 349
>gb|AC007396.6|AC007396 Genomic sequence for Arabidopsis thaliana BAC T4O12 from chromosome I, complete sequence Length = 95870 Score = 48.1 bits (24), Expect = 0.009 Identities = 81/100 (81%) Strand = Plus / Plus Query: 56 agggcccaaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtg 115 |||| ||||| |||||||||||||| || || || || |||||||| | || | |||| Sbjct: 83609 agggtccaaagtaccaggagattgttaatattcgcttaggagatggatcaacgagacgtg 83668 Query: 116 gtcaagttctggaagttgatggtgaaaaggctgttgtgca 155 |||| ||| ||||||||||||| || || || |||||||| Sbjct: 83669 gtcaggttttggaagttgatggcgagaaagcagttgtgca 83708
>dbj|AP001625.1| Homo sapiens genomic DNA, chromosome 21, clone:KB907F12, MX1-D21S171 region, complete sequence Length = 130626 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 ctggaagttgatggtgaaaag 144 ||||||||||||||||||||| Sbjct: 14673 ctggaagttgatggtgaaaag 14653
>dbj|BS000228.1| Pan troglodytes chromosome 22 clone:RP43-139F08, map 22, complete sequences Length = 160535 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 ctggaagttgatggtgaaaag 144 ||||||||||||||||||||| Sbjct: 99769 ctggaagttgatggtgaaaag 99749
>dbj|AP001746.1| Homo sapiens genomic DNA, chromosome 21q, section 90/105 Length = 340000 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 ctggaagttgatggtgaaaag 144 ||||||||||||||||||||| Sbjct: 329826 ctggaagttgatggtgaaaag 329806
>dbj|AP001624.1| Homo sapiens genomic DNA, chromosome 21, clone:KB994G8, MX1-D21S171 region, complete sequence Length = 108500 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 ctggaagttgatggtgaaaag 144 ||||||||||||||||||||| Sbjct: 96792 ctggaagttgatggtgaaaag 96772
>ref|XM_824139.1| Trypanosoma brucei TREU927 vacuolar ATP synthase subunit B (Tb11.01.3560) partial mRNA Length = 1488 Score = 40.1 bits (20), Expect = 2.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 124 ctggaagttgatggtgaaaaggctgttgtgca 155 |||||||| || ||||| |||||||||||||| Sbjct: 226 ctggaagtggacggtgataaggctgttgtgca 257
>emb|BX323028.6| Zebrafish DNA sequence from clone DKEY-211A8 in linkage group 23, complete sequence Length = 97428 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 aaagtaaagggcccaaaata 68 |||||||||||||||||||| Sbjct: 82166 aaagtaaagggcccaaaata 82185
>gb|AC100092.9| Mus musculus chromosome 3, clone RP23-37H10, complete sequence Length = 186799 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 acaaagtaaagggcccaaaa 66 |||||||||||||||||||| Sbjct: 153922 acaaagtaaagggcccaaaa 153903
>emb|BX005025.16| Zebrafish DNA sequence from clone DKEY-67K20 in linkage group 8, complete sequence Length = 196375 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aaagtaaagggcccaaaata 68 |||||||||||||||||||| Sbjct: 10967 aaagtaaagggcccaaaata 10948
>emb|CR759748.6| Zebrafish DNA sequence from clone DKEYP-118G11 in linkage group 17, complete sequence Length = 165743 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aaagtaaagggcccaaaata 68 |||||||||||||||||||| Sbjct: 4611 aaagtaaagggcccaaaata 4592
>emb|BX248137.9| Zebrafish DNA sequence from clone DKEY-19L19, complete sequence Length = 209896 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aaagtaaagggcccaaaata 68 |||||||||||||||||||| Sbjct: 111593 aaagtaaagggcccaaaata 111574
>emb|BX005020.7| Zebrafish DNA sequence from clone DKEY-237D7 in linkage group 8, complete sequence Length = 202747 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 aaagtaaagggcccaaaata 68 |||||||||||||||||||| Sbjct: 191781 aaagtaaagggcccaaaata 191800
>emb|BX510301.6| Zebrafish DNA sequence from clone CH211-215A10 in linkage group 19, complete sequence Length = 209585 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aaagtaaagggcccaaaata 68 |||||||||||||||||||| Sbjct: 151489 aaagtaaagggcccaaaata 151470
>emb|BX255897.3| Zebrafish DNA sequence from clone DKEY-263B2 in linkage group 20, complete sequence Length = 181862 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 aaagtaaagggcccaaaata 68 |||||||||||||||||||| Sbjct: 10451 aaagtaaagggcccaaaata 10470
>emb|BX927281.25| Zebrafish DNA sequence from clone CH211-255P12 in linkage group 18, complete sequence Length = 151835 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aaagtaaagggcccaaaata 68 |||||||||||||||||||| Sbjct: 144783 aaagtaaagggcccaaaata 144764
>emb|CR381668.8| Zebrafish DNA sequence from clone CH211-238A12 in linkage group 18, complete sequence Length = 155228 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aaagtaaagggcccaaaata 68 |||||||||||||||||||| Sbjct: 41034 aaagtaaagggcccaaaata 41015 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aaagtaaagggcccaaaata 68 |||||||||||||||||||| Sbjct: 35088 aaagtaaagggcccaaaata 35069 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aaagtaaagggcccaaaata 68 |||||||||||||||||||| Sbjct: 29140 aaagtaaagggcccaaaata 29121
>emb|CR388173.7| Zebrafish DNA sequence from clone DKEYP-109D11 in linkage group 19, complete sequence Length = 55374 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aaagtaaagggcccaaaata 68 |||||||||||||||||||| Sbjct: 350 aaagtaaagggcccaaaata 331
>emb|BX571830.6| Zebrafish DNA sequence from clone DKEY-261I16 in linkage group 19, complete sequence Length = 143486 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 aaagtaaagggcccaaaata 68 |||||||||||||||||||| Sbjct: 1651 aaagtaaagggcccaaaata 1670
>emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in linkage group 18, complete sequence Length = 248419 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 aaagtaaagggcccaaaata 68 |||||||||||||||||||| Sbjct: 196400 aaagtaaagggcccaaaata 196419
>emb|AL935143.9| Zebrafish DNA sequence from clone CH211-192E21, complete sequence Length = 157691 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aaagtaaagggcccaaaata 68 |||||||||||||||||||| Sbjct: 128692 aaagtaaagggcccaaaata 128673
>dbj|AB036925.1| Citrus unshiu Cit-VATP B-1 gene for vacuolar H+-ATPase B subunit, partial cds Length = 2644 Score = 40.1 bits (20), Expect = 2.1 Identities = 65/80 (81%) Strand = Plus / Plus Query: 73 gagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagttctggaagtt 132 |||||||| || || || ||||||||||| || | || |||||||| || || |||||| Sbjct: 408 gagattgtcaatattcggttgggagatggaacaatgcgacgtggtcaggtcctagaagtt 467 Query: 133 gatggtgaaaaggctgttgt 152 ||||| || || |||||||| Sbjct: 468 gatggagagaaagctgttgt 487
>ref|XM_360324.1| Magnaporthe grisea 70-15 hypothetical protein (MG05698.4) partial mRNA Length = 1203 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 109 cggcgtggtcaagttctgg 127 ||||||||||||||||||| Sbjct: 531 cggcgtggtcaagttctgg 549
>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome Length = 1827111 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 117 tcaagttctggaagttgat 135 ||||||||||||||||||| Sbjct: 968244 tcaagttctggaagttgat 968262
>gb|AC123935.4| Mus musculus BAC clone RP23-354J3 from chromosome 13, complete sequence Length = 219370 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 124 ctggaagttgatggtgaaa 142 ||||||||||||||||||| Sbjct: 196748 ctggaagttgatggtgaaa 196766
>ref|XM_786517.1| PREDICTED: Strongylocentrotus purpuratus similar to CG17369-PB, isoform B (LOC586747), mRNA Length = 1365 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 28 ggacctctggttatcttggacaa 50 ||||||||||||||| ||||||| Sbjct: 14 ggacctctggttatcctggacaa 36
>gb|BC100631.1| Rattus norvegicus cDNA clone IMAGE:7938269, containing frame-shift errors Length = 3411 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 95 gagatggcaccactcggcg 113 ||||||||||||||||||| Sbjct: 448 gagatggcaccactcggcg 466
>dbj|AB210108.1| Rattus norvegicus Numb mRNA, complete cds Length = 1779 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 95 gagatggcaccactcggcg 113 ||||||||||||||||||| Sbjct: 362 gagatggcaccactcggcg 380
>gb|AY231438.1| Suaeda maritima subsp. salsa vacuolar H(+)-ATPase subunit B (VHA-B) mRNA, complete cds Length = 1974 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 127 gaagttgatggtgaaaaggctgt 149 ||||||||||||||||| ||||| Sbjct: 213 gaagttgatggtgaaaaagctgt 235
>gb|AC154290.1| Mus musculus BAC clone RP23-443K24 from chromosome 13, complete sequence Length = 193345 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 124 ctggaagttgatggtgaaa 142 ||||||||||||||||||| Sbjct: 176032 ctggaagttgatggtgaaa 176014
>gb|AC093401.4| Homo sapiens BAC clone RP11-93M19 from 2, complete sequence Length = 99088 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 aaagggcccaaaataccag 72 ||||||||||||||||||| Sbjct: 7576 aaagggcccaaaataccag 7558
>ref|NM_133287.1| Rattus norvegicus numb gene homolog (Drosophila) (Numb), mRNA Length = 1779 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 95 gagatggcaccactcggcg 113 ||||||||||||||||||| Sbjct: 362 gagatggcaccactcggcg 380
>gb|DQ336705.1| Rattus norvegicus numb isoform i/i mRNA, complete cds, alternatively spliced Length = 1974 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 95 gagatggcaccactcggcg 113 ||||||||||||||||||| Sbjct: 396 gagatggcaccactcggcg 414
>gb|DQ336704.1| Rattus norvegicus numb isoform o/i mRNA, complete cds, alternatively spliced Length = 1941 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 95 gagatggcaccactcggcg 113 ||||||||||||||||||| Sbjct: 363 gagatggcaccactcggcg 381
>gb|DQ336703.1| Rattus norvegicus numb isoform o/o mRNA, complete cds, alternatively spliced Length = 1794 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 95 gagatggcaccactcggcg 113 ||||||||||||||||||| Sbjct: 363 gagatggcaccactcggcg 381
>gb|DQ336702.1| Rattus norvegicus numb isoform i/o mRNA, complete cds, alternatively spliced Length = 1827 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 95 gagatggcaccactcggcg 113 ||||||||||||||||||| Sbjct: 396 gagatggcaccactcggcg 414
>gb|AC004050.1|AC004050 Homo sapiens chromosome 4 clone B207D4 map 4q25, complete sequence Length = 127098 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 119 aagttctggaagttgatgg 137 ||||||||||||||||||| Sbjct: 59290 aagttctggaagttgatgg 59272 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,323,214 Number of Sequences: 3902068 Number of extensions: 1323214 Number of successful extensions: 103079 Number of sequences better than 10.0: 90 Number of HSP's better than 10.0 without gapping: 90 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 102792 Number of HSP's gapped (non-prelim): 273 length of query: 172 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 150 effective length of database: 17,147,199,772 effective search space: 2572079965800 effective search space used: 2572079965800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)