ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags28h03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|L11862.1|BLYVATP57A Hordeum vulgare vacuolar ATPase B subunit... 333 1e-88
2gb|AF375052.1|AF375052 Oryza sativa vacuolar ATPase B subunit mR... 270 1e-69
3dbj|AK099907.1| Oryza sativa (japonica cultivar-group) cDNA clon... 270 1e-69
4dbj|AK064802.1| Oryza sativa (japonica cultivar-group) cDNA clon... 270 1e-69
5gb|L11873.1|BLYVATP57B Hordeum vulgare vacuolar ATPase B subunit... 198 4e-48
6gb|AY104180.1| Zea mays PCO062733 mRNA sequence 190 9e-46
7gb|BT016637.1| Zea mays clone Contig470 mRNA sequence 174 6e-41
8dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 159 3e-36
9dbj|AP005458.3| Oryza sativa (japonica cultivar-group) genomic D... 159 3e-36
10dbj|AP005471.2| Oryza sativa (japonica cultivar-group) genomic D... 159 3e-36
11dbj|AB055106.1| Oryza sativa (japonica cultivar-group) V-ATPase ... 159 3e-36
12dbj|AK059850.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 8e-31
13gb|AF220611.1|AF220611 Nicotiana tabacum vacuolar H+-ATPase B su... 131 8e-28
14dbj|AK103104.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 8e-28
15dbj|AK100817.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 3e-27
16gb|AC097175.2| Oryza sativa (japonica cultivar-group) chromosome... 119 3e-24
17dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 119 3e-24
18dbj|AB055105.1| Oryza sativa (japonica cultivar-group) V-ATPase ... 119 3e-24
19gb|BT013016.1| Lycopersicon esculentum clone 114254F, mRNA sequence 94 2e-16
20ref|NM_191702.1| Oryza sativa (japonica cultivar-group), predic... 86 4e-14
21dbj|AK103899.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 4e-14
22emb|AJ438590.1|MCR438590 Mesembryanthemum crystallinum mRNA for ... 76 4e-11
23ref|NM_120012.3| Arabidopsis thaliana ATP binding / hydrogen-exp... 72 6e-10
24ref|NM_001036731.1| Arabidopsis thaliana ATP binding / hydrogen-... 72 6e-10
25ref|NM_202978.1| Arabidopsis thaliana ATP binding / hydrogen-exp... 72 6e-10
26ref|NM_001036730.1| Arabidopsis thaliana ATP binding / hydrogen-... 72 6e-10
27gb|AY059167.1| Arabidopsis thaliana AT4g38510/F20M13_70 mRNA, co... 72 6e-10
28gb|AY039518.1| Arabidopsis thaliana AT4g38510/F20M13_70 mRNA, co... 72 6e-10
29dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 66 4e-08
30dbj|AP003410.4| Oryza sativa (japonica cultivar-group) genomic D... 66 4e-08
31dbj|AP002901.2| Oryza sativa (japonica cultivar-group) genomic D... 66 4e-08
32ref|NM_106251.2| Arabidopsis thaliana ATP binding / hydrogen-exp... 64 1e-07
33gb|AY125532.1| Arabidopsis thaliana At1g76030/T4O12_24 mRNA, com... 64 1e-07
34gb|AY094424.1| Arabidopsis thaliana At1g76030/T4O12_24 mRNA, com... 64 1e-07
35gb|AC006234.4| Arabidopsis thaliana chromosome 2 clone F5H14 map... 64 1e-07
36gb|J04185.1|ATHATPASE Arabidopsis thaliana nucleotide-binding su... 64 1e-07
37gb|AY045609.1| Arabidopsis thaliana AT4g38510/F20M13_70 mRNA, co... 58 9e-06
38ref|NM_101877.2| Arabidopsis thaliana ATP binding / hydrogen-tra... 52 6e-04
39ref|NM_202142.1| Arabidopsis thaliana ATP binding / hydrogen-exp... 52 6e-04
40gb|BT000150.1| Arabidopsis thaliana Unknown protein (At1g20260) ... 52 6e-04
41gb|AY062616.1| Arabidopsis thaliana Unknown protein (F14O10.13) ... 52 6e-04
42emb|BX818393.1|CNS0AAXF Arabidopsis thaliana Full-length cDNA Co... 52 6e-04
43dbj|AK176750.1| Arabidopsis thaliana mRNA for vacuolar-type H+-A... 52 6e-04
44dbj|AK176641.1| Arabidopsis thaliana mRNA for vacuolar-type H+-A... 52 6e-04
45dbj|AK176915.1| Arabidopsis thaliana mRNA for vacuolar-type H+-A... 52 6e-04
46dbj|AK176408.1| Arabidopsis thaliana mRNA for vacuolar-type H+-A... 52 6e-04
47dbj|AK175727.1| Arabidopsis thaliana mRNA for vacuolar-type H+-A... 52 6e-04
48dbj|AK175169.1| Arabidopsis thaliana mRNA for vacuolar-type H+-A... 52 6e-04
49dbj|AB024277.1| Citrus unshiu mRNA for vacuolar H+-ATPase B subu... 52 6e-04
50emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, ... 50 0.002
51emb|AL035539.1|ATF22I13 Arabidopsis thaliana DNA chromosome 4, B... 50 0.002
52gb|AC069558.5|AC069558 Genomic Sequence For Arabidopsis thaliana... 50 0.002
53emb|AL035540.1|ATF20M13 Arabidopsis thaliana DNA chromosome 4, B... 50 0.002
54gb|U07052.1|GHU07052 Gossypium hirsutum vacuolar H+-ATPase subun... 50 0.002
55gb|AC007396.6|AC007396 Genomic sequence for Arabidopsis thaliana... 48 0.009
56dbj|AP001625.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 42 0.54
57dbj|BS000228.1| Pan troglodytes chromosome 22 clone:RP43-139F08,... 42 0.54
58dbj|AP001746.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 42 0.54
59dbj|AP001624.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 42 0.54
60ref|XM_824139.1| Trypanosoma brucei TREU927 vacuolar ATP synthas... 40 2.1
61emb|BX323028.6| Zebrafish DNA sequence from clone DKEY-211A8 in ... 40 2.1
62gb|AC100092.9| Mus musculus chromosome 3, clone RP23-37H10, comp... 40 2.1
63emb|BX005025.16| Zebrafish DNA sequence from clone DKEY-67K20 in... 40 2.1
64emb|CR759748.6| Zebrafish DNA sequence from clone DKEYP-118G11 i... 40 2.1
65emb|BX248137.9| Zebrafish DNA sequence from clone DKEY-19L19, co... 40 2.1
66emb|BX005020.7| Zebrafish DNA sequence from clone DKEY-237D7 in ... 40 2.1
67emb|BX510301.6| Zebrafish DNA sequence from clone CH211-215A10 i... 40 2.1
68emb|BX255897.3| Zebrafish DNA sequence from clone DKEY-263B2 in ... 40 2.1
69emb|BX927281.25| Zebrafish DNA sequence from clone CH211-255P12 ... 40 2.1
70emb|CR381668.8| Zebrafish DNA sequence from clone CH211-238A12 i... 40 2.1
71emb|CR388173.7| Zebrafish DNA sequence from clone DKEYP-109D11 i... 40 2.1
72emb|BX571830.6| Zebrafish DNA sequence from clone DKEY-261I16 in... 40 2.1
73emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in... 40 2.1
74emb|AL935143.9| Zebrafish DNA sequence from clone CH211-192E21, ... 40 2.1
75dbj|AB036925.1| Citrus unshiu Cit-VATP B-1 gene for vacuolar H+-... 40 2.1
76ref|XM_360324.1| Magnaporthe grisea 70-15 hypothetical protein (... 38 8.4
77gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118... 38 8.4
78gb|AC123935.4| Mus musculus BAC clone RP23-354J3 from chromosome... 38 8.4
79ref|XM_786517.1| PREDICTED: Strongylocentrotus purpuratus simila... 38 8.4
80gb|BC100631.1| Rattus norvegicus cDNA clone IMAGE:7938269, conta... 38 8.4
81dbj|AB210108.1| Rattus norvegicus Numb mRNA, complete cds 38 8.4
82gb|AY231438.1| Suaeda maritima subsp. salsa vacuolar H(+)-ATPase... 38 8.4
83gb|AC154290.1| Mus musculus BAC clone RP23-443K24 from chromosom... 38 8.4
84gb|AC093401.4| Homo sapiens BAC clone RP11-93M19 from 2, complet... 38 8.4
85ref|NM_133287.1| Rattus norvegicus numb gene homolog (Drosophila... 38 8.4
86gb|DQ336705.1| Rattus norvegicus numb isoform i/i mRNA, complete... 38 8.4
87gb|DQ336704.1| Rattus norvegicus numb isoform o/i mRNA, complete... 38 8.4
88gb|DQ336703.1| Rattus norvegicus numb isoform o/o mRNA, complete... 38 8.4
89gb|DQ336702.1| Rattus norvegicus numb isoform i/o mRNA, complete... 38 8.4
90gb|AC004050.1|AC004050 Homo sapiens chromosome 4 clone B207D4 ma... 38 8.4

>gb|L11862.1|BLYVATP57A Hordeum vulgare vacuolar ATPase B subunit isoform mRNA, complete
           cds
          Length = 1923

 Score =  333 bits (168), Expect = 1e-88
 Identities = 170/171 (99%)
 Strand = Plus / Plus

                                                                       
Query: 2   agtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcc 61
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 agtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcc 197

                                                                       
Query: 62  caaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaag 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 caaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaag 257

                                                              
Query: 122 ttctggaagttgatggtgaaaaggctgttgtgcangtcttcgaaggcactt 172
           |||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 258 ttctggaagttgatggtgaaaaggctgttgtgcaggtcttcgaaggcactt 308



to top

>gb|AF375052.1|AF375052 Oryza sativa vacuolar ATPase B subunit mRNA, complete cds
          Length = 1947

 Score =  270 bits (136), Expect = 1e-69
 Identities = 162/171 (94%)
 Strand = Plus / Plus

                                                                       
Query: 2   agtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcc 61
           |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 206 agtacaggactgtttctggtgtggcaggacctctggttatcttggataaagtaaagggcc 265

                                                                       
Query: 62  caaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaag 121
           |||| |||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 266 caaagtaccaggaaattgtaaacatccgattgggagatggcaccactcgccgtggccaag 325

                                                              
Query: 122 ttctggaagttgatggtgaaaaggctgttgtgcangtcttcgaaggcactt 172
           ||||||||||||| |||||||||||||||||||| ||||| ||||||||||
Sbjct: 326 ttctggaagttgacggtgaaaaggctgttgtgcaggtctttgaaggcactt 376



to top

>dbj|AK099907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116A19, full
           insert sequence
          Length = 1940

 Score =  270 bits (136), Expect = 1e-69
 Identities = 162/171 (94%)
 Strand = Plus / Plus

                                                                       
Query: 2   agtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcc 61
           |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 199 agtacaggactgtttctggtgtggcaggacctctggttatcttggataaagtaaagggcc 258

                                                                       
Query: 62  caaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaag 121
           |||| |||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 259 caaagtaccaggaaattgtaaacatccgattgggagatggcaccactcgccgtggccaag 318

                                                              
Query: 122 ttctggaagttgatggtgaaaaggctgttgtgcangtcttcgaaggcactt 172
           ||||||||||||| |||||||||||||||||||| ||||| ||||||||||
Sbjct: 319 ttctggaagttgacggtgaaaaggctgttgtgcaggtctttgaaggcactt 369



to top

>dbj|AK064802.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000D11, full
           insert sequence
          Length = 1933

 Score =  270 bits (136), Expect = 1e-69
 Identities = 162/171 (94%)
 Strand = Plus / Plus

                                                                       
Query: 2   agtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcc 61
           |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 188 agtacaggactgtttctggtgtggcaggacctctggttatcttggataaagtaaagggcc 247

                                                                       
Query: 62  caaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaag 121
           |||| |||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 248 caaagtaccaggaaattgtaaacatccgattgggagatggcaccactcgccgtggccaag 307

                                                              
Query: 122 ttctggaagttgatggtgaaaaggctgttgtgcangtcttcgaaggcactt 172
           ||||||||||||| |||||||||||||||||||| ||||| ||||||||||
Sbjct: 308 ttctggaagttgacggtgaaaaggctgttgtgcaggtctttgaaggcactt 358



to top

>gb|L11873.1|BLYVATP57B Hordeum vulgare vacuolar ATPase B subunit mRNA, complete cds
          Length = 1778

 Score =  198 bits (100), Expect = 4e-48
 Identities = 153/171 (89%)
 Strand = Plus / Plus

                                                                       
Query: 2   agtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcc 61
           |||| ||||| || || ||||||||||| ||  ||||||| |||||||||||||||||||
Sbjct: 93  agtataggactgtctccggtgtggcagggccgttggttattttggacaaagtaaagggcc 152

                                                                       
Query: 62  caaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaag 121
           |||| || ||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 153 caaagtatcaggagattgtgaacatccgattgggagatggcaccactcgtcgtggtcaag 212

                                                              
Query: 122 ttctggaagttgatggtgaaaaggctgttgtgcangtcttcgaaggcactt 172
           | || ||||||||||||||||| ||||||||||| ||||| ||||| ||||
Sbjct: 213 tcctcgaagttgatggtgaaaaagctgttgtgcaggtctttgaaggtactt 263



to top

>gb|AY104180.1| Zea mays PCO062733 mRNA sequence
          Length = 2013

 Score =  190 bits (96), Expect = 9e-46
 Identities = 152/171 (88%)
 Strand = Plus / Plus

                                                                       
Query: 2   agtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcc 61
           |||||||||| || ||||||||||| || ||||||||||||||||| |||||||||||||
Sbjct: 221 agtacaggactgtatctggtgtggccgggcctctggttatcttggataaagtaaagggcc 280

                                                                       
Query: 62  caaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaag 121
           |||| ||||| || ||||||||||||||| | ||||||||||||||||| ||||||||||
Sbjct: 281 caaagtaccaagaaattgtaaacatccgacttggagatggcaccactcgccgtggtcaag 340

                                                              
Query: 122 ttctggaagttgatggtgaaaaggctgttgtgcangtcttcgaaggcactt 172
           | || ||||||||||| ||||| ||||||||||| || || ||||| ||||
Sbjct: 341 tccttgaagttgatggagaaaaagctgttgtgcaggtttttgaaggaactt 391



to top

>gb|BT016637.1| Zea mays clone Contig470 mRNA sequence
          Length = 950

 Score =  174 bits (88), Expect = 6e-41
 Identities = 150/171 (87%)
 Strand = Plus / Plus

                                                                       
Query: 2   agtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcc 61
           |||||||||| || |||||||| || || |||||||| || ||||| |||||||||||||
Sbjct: 206 agtacaggactgtatctggtgttgctgggcctctggtcatattggataaagtaaagggcc 265

                                                                       
Query: 62  caaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaag 121
           |||| ||||| || ||||||||||||||| | ||||||||||||| ||| ||||||||||
Sbjct: 266 caaagtaccaagaaattgtaaacatccgacttggagatggcaccaatcgccgtggtcaag 325

                                                              
Query: 122 ttctggaagttgatggtgaaaaggctgttgtgcangtcttcgaaggcactt 172
           | |||||||||||||| ||||| ||||||||||| ||||| ||||| ||||
Sbjct: 326 tcctggaagttgatggcgaaaaagctgttgtgcaggtctttgaaggaactt 376



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  159 bits (80), Expect = 3e-36
 Identities = 95/100 (95%)
 Strand = Plus / Minus

                                                                            
Query: 56       agggcccaaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtg 115
                |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 21619431 agggcccaaagtaccaggaaattgtaaacatccgattgggagatggcaccactcgccgtg 21619372

                                                        
Query: 116      gtcaagttctggaagttgatggtgaaaaggctgttgtgca 155
                | ||||||||||||||||| ||||||||||||||||||||
Sbjct: 21619371 gccaagttctggaagttgacggtgaaaaggctgttgtgca 21619332



 Score = 97.6 bits (49), Expect = 1e-17
 Identities = 55/57 (96%)
 Strand = Plus / Minus

                                                                         
Query: 2        agtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagg 58
                |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 21619575 agtacaggactgtttctggtgtggcaggacctctggttatcttggataaagtaaagg 21619519



to top

>dbj|AP005458.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0567G03
          Length = 196834

 Score =  159 bits (80), Expect = 3e-36
 Identities = 95/100 (95%)
 Strand = Plus / Minus

                                                                          
Query: 56     agggcccaaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtg 115
              |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 176615 agggcccaaagtaccaggaaattgtaaacatccgattgggagatggcaccactcgccgtg 176556

                                                      
Query: 116    gtcaagttctggaagttgatggtgaaaaggctgttgtgca 155
              | ||||||||||||||||| ||||||||||||||||||||
Sbjct: 176555 gccaagttctggaagttgacggtgaaaaggctgttgtgca 176516



 Score = 97.6 bits (49), Expect = 1e-17
 Identities = 55/57 (96%)
 Strand = Plus / Minus

                                                                       
Query: 2      agtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagg 58
              |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 176759 agtacaggactgtttctggtgtggcaggacctctggttatcttggataaagtaaagg 176703



to top

>dbj|AP005471.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0062E01
          Length = 161804

 Score =  159 bits (80), Expect = 3e-36
 Identities = 95/100 (95%)
 Strand = Plus / Minus

                                                                         
Query: 56    agggcccaaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtg 115
             |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 18362 agggcccaaagtaccaggaaattgtaaacatccgattgggagatggcaccactcgccgtg 18303

                                                     
Query: 116   gtcaagttctggaagttgatggtgaaaaggctgttgtgca 155
             | ||||||||||||||||| ||||||||||||||||||||
Sbjct: 18302 gccaagttctggaagttgacggtgaaaaggctgttgtgca 18263



 Score = 97.6 bits (49), Expect = 1e-17
 Identities = 55/57 (96%)
 Strand = Plus / Minus

                                                                      
Query: 2     agtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagg 58
             |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 18506 agtacaggactgtttctggtgtggcaggacctctggttatcttggataaagtaaagg 18450



to top

>dbj|AB055106.1| Oryza sativa (japonica cultivar-group) V-ATPase B gene for vacuolar
            ATPase B subunit, complete cds
          Length = 6033

 Score =  159 bits (80), Expect = 3e-36
 Identities = 95/100 (95%)
 Strand = Plus / Plus

                                                                        
Query: 56   agggcccaaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtg 115
            |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1612 agggcccaaagtaccaggaaattgtaaacatccgattgggagatggcaccactcgccgtg 1671

                                                    
Query: 116  gtcaagttctggaagttgatggtgaaaaggctgttgtgca 155
            | ||||||||||||||||| ||||||||||||||||||||
Sbjct: 1672 gccaagttctggaagttgacggtgaaaaggctgttgtgca 1711



 Score = 97.6 bits (49), Expect = 1e-17
 Identities = 55/57 (96%)
 Strand = Plus / Plus

                                                                     
Query: 2    agtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagg 58
            |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1468 agtacaggactgtttctggtgtggcaggacctctggttatcttggataaagtaaagg 1524



to top

>dbj|AK059850.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-G02, full
           insert sequence
          Length = 1178

 Score =  141 bits (71), Expect = 8e-31
 Identities = 136/158 (86%), Gaps = 10/158 (6%)
 Strand = Plus / Plus

                                                                       
Query: 16  tctggtgtggcaggacctctggttatcttggacaaagtaaagggcccaaaataccaggag 75
           ||||||||| ||||||||||| |||||||||| |||||||||         ||| |||| 
Sbjct: 575 tctggtgtgccaggacctctgtttatcttggataaagtaaag---------tactaggaa 625

                                                                       
Query: 76  attgtaaacatccgattgggagatggcaccactcggcgtggtcaagttctggaagttgat 135
           |||||||||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||
Sbjct: 626 attgtaaacatccgattgggagatggaaccactcggtgtggccaaattctggaagttgat 685

                                                 
Query: 136 ggtgaaa-aggctgttgtgcangtcttcgaaggcactt 172
           ||||||| ||||||||||||| ||||| |||| |||||
Sbjct: 686 ggtgaaagaggctgttgtgcaggtctttgaagacactt 723



to top

>gb|AF220611.1|AF220611 Nicotiana tabacum vacuolar H+-ATPase B subunit mRNA, complete cds
          Length = 1910

 Score =  131 bits (66), Expect = 8e-28
 Identities = 117/134 (87%)
 Strand = Plus / Plus

                                                                       
Query: 19  ggtgtggcaggacctctggttatcttggacaaagtaaagggcccaaaataccaggagatt 78
           ||||| || ||||| ||||||||| | |||||||| ||||| || || ||||||||||||
Sbjct: 106 ggtgttgctggaccgctggttatccttgacaaagttaagggacccaagtaccaggagatt 165

                                                                       
Query: 79  gtaaacatccgattgggagatggcaccactcggcgtggtcaagttctggaagttgatggt 138
           || ||||| || ||||||||||| || ||||| ||||| |||||||||||||||||||||
Sbjct: 166 gttaacattcggttgggagatggaactactcgacgtggacaagttctggaagttgatggt 225

                         
Query: 139 gaaaaggctgttgt 152
           ||||| ||||||||
Sbjct: 226 gaaaaagctgttgt 239



to top

>dbj|AK103104.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118O17, full
            insert sequence
          Length = 1876

 Score =  131 bits (66), Expect = 8e-28
 Identities = 125/145 (86%), Gaps = 10/145 (6%)
 Strand = Plus / Plus

                                                                        
Query: 16   tctggtgtggcaggacctctggttatcttggacaaagtaaagggcccaaaataccaggag 75
            ||||||||| ||||||||||| |||||||||| |||||||||         ||| |||| 
Sbjct: 1036 tctggtgtgccaggacctctgtttatcttggataaagtaaag---------tactaggaa 1086

                                                                        
Query: 76   attgtaaacatccgattgggagatggcaccactcggcgtggtcaagttctggaagttgat 135
            |||||||||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||
Sbjct: 1087 attgtaaacatccgattgggagatggaaccactcggtgtggccaaattctggaagttgat 1146

                                     
Query: 136  ggtgaaa-aggctgttgtgcangtc 159
            ||||||| ||||||||||||| |||
Sbjct: 1147 ggtgaaagaggctgttgtgcaggtc 1171



to top

>dbj|AK100817.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023122D13, full
            insert sequence
          Length = 2242

 Score =  129 bits (65), Expect = 3e-27
 Identities = 101/112 (90%), Gaps = 1/112 (0%)
 Strand = Plus / Plus

                                                                        
Query: 62   caaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaag 121
            |||| ||| |||| |||||||||||||||||||||||||| ||||||||| |||| ||| 
Sbjct: 1483 caaagtactaggaaattgtaaacatccgattgggagatggaaccactcggtgtggccaaa 1542

                                                                
Query: 122  ttctggaagttgatggtgaaa-aggctgttgtgcangtcttcgaaggcactt 172
            ||||||||||||||||||||| ||||||||||||| ||||| |||| |||||
Sbjct: 1543 ttctggaagttgatggtgaaagaggctgttgtgcaggtctttgaagacactt 1594



 Score = 61.9 bits (31), Expect = 6e-07
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                       
Query: 16   tctggtgtggcaggacctctggttatcttggacaaagtaaagg 58
            ||||||||| ||||||||||| |||||||||| ||||||||||
Sbjct: 1340 tctggtgtgccaggacctctgtttatcttggataaagtaaagg 1382



to top

>gb|AC097175.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1119_H02,
             complete sequence
          Length = 138584

 Score =  119 bits (60), Expect = 3e-24
 Identities = 90/99 (90%), Gaps = 1/99 (1%)
 Strand = Plus / Minus

                                                                         
Query: 62    caaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaag 121
             |||| ||| |||| |||||||||||||||||||||||||| ||||||||| |||| ||| 
Sbjct: 51562 caaagtactaggaaattgtaaacatccgattgggagatggaaccactcggtgtggccaaa 51503

                                                    
Query: 122   ttctggaagttgatggtgaaa-aggctgttgtgcangtc 159
             ||||||||||||||||||||| ||||||||||||| |||
Sbjct: 51502 ttctggaagttgatggtgaaagaggctgttgtgcaggtc 51464



 Score = 61.9 bits (31), Expect = 6e-07
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                        
Query: 16    tctggtgtggcaggacctctggttatcttggacaaagtaaagg 58
             ||||||||| ||||||||||| |||||||||| ||||||||||
Sbjct: 51705 tctggtgtgccaggacctctgtttatcttggataaagtaaagg 51663



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  119 bits (60), Expect = 3e-24
 Identities = 90/99 (90%), Gaps = 1/99 (1%)
 Strand = Plus / Minus

                                                                            
Query: 62       caaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaag 121
                |||| ||| |||| |||||||||||||||||||||||||| ||||||||| |||| ||| 
Sbjct: 23847727 caaagtactaggaaattgtaaacatccgattgggagatggaaccactcggtgtggccaaa 23847668

                                                       
Query: 122      ttctggaagttgatggtgaaa-aggctgttgtgcangtc 159
                ||||||||||||||||||||| ||||||||||||| |||
Sbjct: 23847667 ttctggaagttgatggtgaaagaggctgttgtgcaggtc 23847629



 Score = 61.9 bits (31), Expect = 6e-07
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                           
Query: 16       tctggtgtggcaggacctctggttatcttggacaaagtaaagg 58
                ||||||||| ||||||||||| |||||||||| ||||||||||
Sbjct: 23847870 tctggtgtgccaggacctctgtttatcttggataaagtaaagg 23847828



to top

>dbj|AB055105.1| Oryza sativa (japonica cultivar-group) V-ATPase B pseudogene for
            vacuolar ATPase B subunit
          Length = 4116

 Score =  119 bits (60), Expect = 3e-24
 Identities = 90/99 (90%), Gaps = 1/99 (1%)
 Strand = Plus / Plus

                                                                        
Query: 62   caaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaag 121
            |||| ||| |||| |||||||||||||||||||||||||| ||||||||| |||| ||| 
Sbjct: 1561 caaagtactaggaaattgtaaacatccgattgggagatggaaccactcggtgtggccaaa 1620

                                                   
Query: 122  ttctggaagttgatggtgaaa-aggctgttgtgcangtc 159
            ||||||||||||||||||||| ||||||||||||| |||
Sbjct: 1621 ttctggaagttgatggtgaaagaggctgttgtgcaggtc 1659



 Score = 61.9 bits (31), Expect = 6e-07
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                       
Query: 16   tctggtgtggcaggacctctggttatcttggacaaagtaaagg 58
            ||||||||| ||||||||||| |||||||||| ||||||||||
Sbjct: 1418 tctggtgtgccaggacctctgtttatcttggataaagtaaagg 1460



to top

>gb|BT013016.1| Lycopersicon esculentum clone 114254F, mRNA sequence
          Length = 1949

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 92/107 (85%)
 Strand = Plus / Plus

                                                                       
Query: 46  gacaaagtaaagggcccaaaataccaggagattgtaaacatccgattgggagatggcacc 105
           |||||||| ||||| || || || ||||||||||| ||||| || ||||||||||| || 
Sbjct: 175 gacaaagtgaagggacccaagtatcaggagattgttaacattcgtttgggagatggaact 234

                                                          
Query: 106 actcggcgtggtcaagttctggaagttgatggtgaaaaggctgttgt 152
           || |||||||| |||||||| ||||||||||||||||| || |||||
Sbjct: 235 acccggcgtggacaagttcttgaagttgatggtgaaaaagcagttgt 281



to top

>ref|NM_191702.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1467

 Score = 85.7 bits (43), Expect = 4e-14
 Identities = 135/166 (81%)
 Strand = Plus / Plus

                                                                       
Query: 2   agtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcc 61
           ||||||||||||| ||||| || || || ||||| || ||  | || ||||| ||||| |
Sbjct: 59  agtacaggacagtctctggagttgctggtcctctagtcattcttgataaagtgaagggtc 118

                                                                       
Query: 62  caaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaag 121
           | |||||||| || ||||| || || ||||| ||||||||||| ||| ||||||||||||
Sbjct: 119 ctaaataccaagaaattgtcaatatacgattaggagatggcacaactaggcgtggtcaag 178

                                                         
Query: 122 ttctggaagttgatggtgaaaaggctgttgtgcangtcttcgaagg 167
           | || ||||| ||||| || || |||||||| || || ||||||||
Sbjct: 179 tgcttgaagtcgatggggagaaagctgttgttcaggttttcgaagg 224



to top

>dbj|AK103899.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150J04, full
           insert sequence
          Length = 1893

 Score = 85.7 bits (43), Expect = 4e-14
 Identities = 135/166 (81%)
 Strand = Plus / Plus

                                                                       
Query: 2   agtacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcc 61
           ||||||||||||| ||||| || || || ||||| || ||  | || ||||| ||||| |
Sbjct: 156 agtacaggacagtctctggagttgctggtcctctagtcattcttgataaagtgaagggtc 215

                                                                       
Query: 62  caaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaag 121
           | |||||||| || ||||| || || ||||| ||||||||||| ||| ||||||||||||
Sbjct: 216 ctaaataccaagaaattgtcaatatacgattaggagatggcacaactaggcgtggtcaag 275

                                                         
Query: 122 ttctggaagttgatggtgaaaaggctgttgtgcangtcttcgaagg 167
           | || ||||| ||||| || || |||||||| || || ||||||||
Sbjct: 276 tgcttgaagtcgatggggagaaagctgttgttcaggttttcgaagg 321



to top

>emb|AJ438590.1|MCR438590 Mesembryanthemum crystallinum mRNA for vacuolar ATPase subunit B
           (vha-B gene)
          Length = 1962

 Score = 75.8 bits (38), Expect = 4e-11
 Identities = 119/146 (81%)
 Strand = Plus / Plus

                                                                       
Query: 4   tacaggacagtttctggtgtggcaggacctctggttatcttggacaaagtaaagggccca 63
           ||||| ||||| || ||||| || || |||||||||||| | || ||||| ||||| || 
Sbjct: 134 tacagaacagtctcaggtgttgctgggcctctggttatcctagaaaaagttaagggacct 193

                                                                       
Query: 64  aaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagtt 123
           ||||| || || ||||| || || || ||||||||||| || |||||  | |||||||| 
Sbjct: 194 aaatatcaagaaattgtcaatattcgtttgggagatggaacaactcgtagaggtcaagtc 253

                                     
Query: 124 ctggaagttgatggtgaaaaggctgt 149
            |||||||||||||||| ||||||||
Sbjct: 254 ttggaagttgatggtgagaaggctgt 279



to top

>ref|NM_120012.3| Arabidopsis thaliana ATP binding / hydrogen-exporting ATPase,
           phosphorylative mechanism / hydrogen-transporting ATP
           synthase, rotational mechanism /> AT4G38510 transcript
           variant AT4G38510.1 mRNA, complete cds
          Length = 2347

 Score = 71.9 bits (36), Expect = 6e-10
 Identities = 114/140 (81%)
 Strand = Plus / Plus

                                                                       
Query: 13  gtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcccaaaataccag 72
           ||||||||||| || |||||||| || ||| | || ||||| ||||| || |||||||| 
Sbjct: 116 gtttctggtgttgcgggacctctcgtcatccttgaaaaagtcaaggggcctaaataccaa 175

                                                                       
Query: 73  gagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagttctggaagtt 132
           || ||||| || |||||  | || ||||| || || || |||||||||||||| ||||||
Sbjct: 176 gaaattgtcaatatccgtcttggggatggaactacccgacgtggtcaagttctcgaagtt 235

                               
Query: 133 gatggtgaaaaggctgttgt 152
           ||||| || || ||||||||
Sbjct: 236 gatggagagaaagctgttgt 255



to top

>ref|NM_001036731.1| Arabidopsis thaliana ATP binding / hydrogen-exporting ATPase,
           phosphorylative mechanism / hydrogen-transporting ATP
           synthase, rotational mechanism /> AT4G38510 transcript
           variant AT4G38510.4 mRNA, complete cds
          Length = 2386

 Score = 71.9 bits (36), Expect = 6e-10
 Identities = 114/140 (81%)
 Strand = Plus / Plus

                                                                       
Query: 13  gtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcccaaaataccag 72
           ||||||||||| || |||||||| || ||| | || ||||| ||||| || |||||||| 
Sbjct: 155 gtttctggtgttgcgggacctctcgtcatccttgaaaaagtcaaggggcctaaataccaa 214

                                                                       
Query: 73  gagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagttctggaagtt 132
           || ||||| || |||||  | || ||||| || || || |||||||||||||| ||||||
Sbjct: 215 gaaattgtcaatatccgtcttggggatggaactacccgacgtggtcaagttctcgaagtt 274

                               
Query: 133 gatggtgaaaaggctgttgt 152
           ||||| || || ||||||||
Sbjct: 275 gatggagagaaagctgttgt 294



to top

>ref|NM_202978.1| Arabidopsis thaliana ATP binding / hydrogen-exporting ATPase,
           phosphorylative mechanism / hydrogen-transporting ATP
           synthase, rotational mechanism /> AT4G38510 transcript
           variant AT4G38510.2 mRNA, complete cds
          Length = 2377

 Score = 71.9 bits (36), Expect = 6e-10
 Identities = 114/140 (81%)
 Strand = Plus / Plus

                                                                       
Query: 13  gtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcccaaaataccag 72
           ||||||||||| || |||||||| || ||| | || ||||| ||||| || |||||||| 
Sbjct: 146 gtttctggtgttgcgggacctctcgtcatccttgaaaaagtcaaggggcctaaataccaa 205

                                                                       
Query: 73  gagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagttctggaagtt 132
           || ||||| || |||||  | || ||||| || || || |||||||||||||| ||||||
Sbjct: 206 gaaattgtcaatatccgtcttggggatggaactacccgacgtggtcaagttctcgaagtt 265

                               
Query: 133 gatggtgaaaaggctgttgt 152
           ||||| || || ||||||||
Sbjct: 266 gatggagagaaagctgttgt 285



to top

>ref|NM_001036730.1| Arabidopsis thaliana ATP binding / hydrogen-exporting ATPase,
           phosphorylative mechanism / hydrogen-transporting ATP
           synthase, rotational mechanism /> AT4G38510 transcript
           variant AT4G38510.3 mRNA, complete cds
          Length = 2485

 Score = 71.9 bits (36), Expect = 6e-10
 Identities = 114/140 (81%)
 Strand = Plus / Plus

                                                                       
Query: 13  gtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcccaaaataccag 72
           ||||||||||| || |||||||| || ||| | || ||||| ||||| || |||||||| 
Sbjct: 254 gtttctggtgttgcgggacctctcgtcatccttgaaaaagtcaaggggcctaaataccaa 313

                                                                       
Query: 73  gagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagttctggaagtt 132
           || ||||| || |||||  | || ||||| || || || |||||||||||||| ||||||
Sbjct: 314 gaaattgtcaatatccgtcttggggatggaactacccgacgtggtcaagttctcgaagtt 373

                               
Query: 133 gatggtgaaaaggctgttgt 152
           ||||| || || ||||||||
Sbjct: 374 gatggagagaaagctgttgt 393



to top

>gb|AY059167.1| Arabidopsis thaliana AT4g38510/F20M13_70 mRNA, complete cds
          Length = 1464

 Score = 71.9 bits (36), Expect = 6e-10
 Identities = 114/140 (81%)
 Strand = Plus / Plus

                                                                       
Query: 13  gtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcccaaaataccag 72
           ||||||||||| || |||||||| || ||| | || ||||| ||||| || |||||||| 
Sbjct: 67  gtttctggtgttgcgggacctctcgtcatccttgaaaaagtcaaggggcctaaataccaa 126

                                                                       
Query: 73  gagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagttctggaagtt 132
           || ||||| || |||||  | || ||||| || || || |||||||||||||| ||||||
Sbjct: 127 gaaattgtcaatatccgtcttggggatggaactacccgacgtggtcaagttctcgaagtt 186

                               
Query: 133 gatggtgaaaaggctgttgt 152
           ||||| || || ||||||||
Sbjct: 187 gatggagagaaagctgttgt 206



to top

>gb|AY039518.1| Arabidopsis thaliana AT4g38510/F20M13_70 mRNA, complete cds
          Length = 1862

 Score = 71.9 bits (36), Expect = 6e-10
 Identities = 114/140 (81%)
 Strand = Plus / Plus

                                                                       
Query: 13  gtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcccaaaataccag 72
           ||||||||||| || |||||||| || ||| | || ||||| ||||| || |||||||| 
Sbjct: 146 gtttctggtgttgcgggacctctcgtcatccttgaaaaagtcaaggggcctaaataccaa 205

                                                                       
Query: 73  gagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagttctggaagtt 132
           || ||||| || |||||  | || ||||| || || || |||||||||||||| ||||||
Sbjct: 206 gaaattgtcaatatccgtcttggggatggaactacccgacgtggtcaagttctcgaagtt 265

                               
Query: 133 gatggtgaaaaggctgttgt 152
           ||||| || || ||||||||
Sbjct: 266 gatggagagaaagctgttgt 285



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 65.9 bits (33), Expect = 4e-08
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                            
Query: 64       aaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagtt 123
                |||||||| || ||||| || || ||||| ||||||||||| ||| ||||||||||||| 
Sbjct: 29531413 aaataccaagaaattgtcaatatacgattaggagatggcacaactaggcgtggtcaagtg 29531472

                                             
Query: 124      ctggaagttgatggtgaaaaggctgttgt 152
                || ||||| ||||| || || ||||||||
Sbjct: 29531473 cttgaagtcgatggggagaaagctgttgt 29531501



to top

>dbj|AP003410.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:B1142C05
          Length = 151457

 Score = 65.9 bits (33), Expect = 4e-08
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                        
Query: 64   aaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagtt 123
            |||||||| || ||||| || || ||||| ||||||||||| ||| ||||||||||||| 
Sbjct: 1233 aaataccaagaaattgtcaatatacgattaggagatggcacaactaggcgtggtcaagtg 1292

                                         
Query: 124  ctggaagttgatggtgaaaaggctgttgt 152
            || ||||| ||||| || || ||||||||
Sbjct: 1293 cttgaagtcgatggggagaaagctgttgt 1321



to top

>dbj|AP002901.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0456F08
          Length = 156850

 Score = 65.9 bits (33), Expect = 4e-08
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                         
Query: 64    aaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagtt 123
             |||||||| || ||||| || || ||||| ||||||||||| ||| ||||||||||||| 
Sbjct: 97687 aaataccaagaaattgtcaatatacgattaggagatggcacaactaggcgtggtcaagtg 97746

                                          
Query: 124   ctggaagttgatggtgaaaaggctgttgt 152
             || ||||| ||||| || || ||||||||
Sbjct: 97747 cttgaagtcgatggggagaaagctgttgt 97775



to top

>ref|NM_106251.2| Arabidopsis thaliana ATP binding / hydrogen-exporting ATPase,
           phosphorylative mechanism / hydrogen-transporting ATP
           synthase, rotational mechanism /> AT1G76030 mRNA,
           complete cds
          Length = 1840

 Score = 63.9 bits (32), Expect = 1e-07
 Identities = 124/155 (80%)
 Strand = Plus / Plus

                                                                       
Query: 13  gtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcccaaaataccag 72
           ||||||||||| || |||||  |||| ||  | |||||||| ||||| ||||| ||||||
Sbjct: 170 gtttctggtgttgctggaccattggtcattcttgacaaagtgaagggtccaaagtaccag 229

                                                                       
Query: 73  gagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagttctggaagtt 132
           |||||||| || || || || ||||||||  | ||  | |||||||| ||| ||||||||
Sbjct: 230 gagattgttaatattcgcttaggagatggatcaacgagacgtggtcaggttttggaagtt 289

                                              
Query: 133 gatggtgaaaaggctgttgtgcangtcttcgaagg 167
           ||||| || || || |||||||| || || |||||
Sbjct: 290 gatggcgagaaagcagttgtgcaggtttttgaagg 324



to top

>gb|AY125532.1| Arabidopsis thaliana At1g76030/T4O12_24 mRNA, complete cds
          Length = 1461

 Score = 63.9 bits (32), Expect = 1e-07
 Identities = 124/155 (80%)
 Strand = Plus / Plus

                                                                       
Query: 13  gtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcccaaaataccag 72
           ||||||||||| || |||||  |||| ||  | |||||||| ||||| ||||| ||||||
Sbjct: 64  gtttctggtgttgctggaccattggtcattcttgacaaagtgaagggtccaaagtaccag 123

                                                                       
Query: 73  gagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagttctggaagtt 132
           |||||||| || || || || ||||||||  | ||  | |||||||| ||| ||||||||
Sbjct: 124 gagattgttaatattcgcttaggagatggatcaacgagacgtggtcaggttttggaagtt 183

                                              
Query: 133 gatggtgaaaaggctgttgtgcangtcttcgaagg 167
           ||||| || || || |||||||| || || |||||
Sbjct: 184 gatggcgagaaagcagttgtgcaggtttttgaagg 218



to top

>gb|AY094424.1| Arabidopsis thaliana At1g76030/T4O12_24 mRNA, complete cds
          Length = 1839

 Score = 63.9 bits (32), Expect = 1e-07
 Identities = 124/155 (80%)
 Strand = Plus / Plus

                                                                       
Query: 13  gtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcccaaaataccag 72
           ||||||||||| || |||||  |||| ||  | |||||||| ||||| ||||| ||||||
Sbjct: 170 gtttctggtgttgctggaccattggtcattcttgacaaagtgaagggtccaaagtaccag 229

                                                                       
Query: 73  gagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagttctggaagtt 132
           |||||||| || || || || ||||||||  | ||  | |||||||| ||| ||||||||
Sbjct: 230 gagattgttaatattcgcttaggagatggatcaacgagacgtggtcaggttttggaagtt 289

                                              
Query: 133 gatggtgaaaaggctgttgtgcangtcttcgaagg 167
           ||||| || || || |||||||| || || |||||
Sbjct: 290 gatggcgagaaagcagttgtgcaggtttttgaagg 324



to top

>gb|AC006234.4| Arabidopsis thaliana chromosome 2 clone F5H14 map mi148, complete
             sequence
          Length = 129667

 Score = 63.9 bits (32), Expect = 1e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                     
Query: 97    gatggcaccactcggcgtggtcaagttctggaagttgatggtgaaaaggctgttgt 152
             ||||| || ||||| |||||||||||||| ||||||||||| || |||||||||||
Sbjct: 35329 gatggaactactcgacgtggtcaagttcttgaagttgatggcgagaaggctgttgt 35384



to top

>gb|J04185.1|ATHATPASE Arabidopsis thaliana nucleotide-binding subunit of vacuolar ATPase
           mRNA, complete cds
          Length = 1863

 Score = 63.9 bits (32), Expect = 1e-07
 Identities = 124/155 (80%)
 Strand = Plus / Plus

                                                                       
Query: 13  gtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcccaaaataccag 72
           ||||||||||| || |||||  |||| ||  | |||||||| ||||| ||||| ||||||
Sbjct: 193 gtttctggtgttgctggaccattggtcattcttgacaaagtgaagggtccaaagtaccag 252

                                                                       
Query: 73  gagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagttctggaagtt 132
           |||||||| || || || || ||||||||  | ||  | |||||||| ||| ||||||||
Sbjct: 253 gagattgttaatattcgcttaggagatggatcaacgagacgtggtcaggttttggaagtt 312

                                              
Query: 133 gatggtgaaaaggctgttgtgcangtcttcgaagg 167
           ||||| || || || |||||||| || || |||||
Sbjct: 313 gatggcgagaaagcagttgtgcaggtttttgaagg 347



to top

>gb|AY045609.1| Arabidopsis thaliana AT4g38510/F20M13_70 mRNA, complete cds
          Length = 1829

 Score = 58.0 bits (29), Expect = 9e-06
 Identities = 113/140 (80%), Gaps = 2/140 (1%)
 Strand = Plus / Plus

                                                                       
Query: 13  gtttctggtgtggcaggacctctggttatcttggacaaagtaaagggcccaaaataccag 72
           ||||||||||| || |||||||| || ||| | || ||||| ||||| || |||||||| 
Sbjct: 115 gtttctggtgttgcgggacctctcgtcatccttgaaaaagtcaaggggcctaaatacca- 173

                                                                       
Query: 73  gagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagttctggaagtt 132
            | ||||| || |||||  | || ||||| || || || |||||||||||||| ||||||
Sbjct: 174 -aaattgtcaatatccgtcttggggatggaactacccgacgtggtcaagttctcgaagtt 232

                               
Query: 133 gatggtgaaaaggctgttgt 152
           ||||| || || ||||||||
Sbjct: 233 gatggagagaaagctgttgt 252



to top

>ref|NM_101877.2| Arabidopsis thaliana ATP binding / hydrogen-transporting ATP
           synthase, rotational mechanism / hydrogen-transporting
           ATPase, rotational mechanism AT1G20260 transcript
           variant AT1G20260.1 mRNA, complete cds
          Length = 1815

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                       
Query: 28  ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgtaaacatc 87
           |||||| |||| ||| | |||||||| ||||| ||||| |||||||||||||| || || 
Sbjct: 217 ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgttaatatt 276

                         
Query: 88  cgattgggagatgg 101
           || || ||||||||
Sbjct: 277 cgcttaggagatgg 290



to top

>ref|NM_202142.1| Arabidopsis thaliana ATP binding / hydrogen-exporting ATPase,
           phosphorylative mechanism / hydrogen-transporting ATP
           synthase, rotational mechanism /> AT1G20260 transcript
           variant AT1G20260.2 mRNA, complete cds
          Length = 1927

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                       
Query: 28  ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgtaaacatc 87
           |||||| |||| ||| | |||||||| ||||| ||||| |||||||||||||| || || 
Sbjct: 217 ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgttaatatt 276

                         
Query: 88  cgattgggagatgg 101
           || || ||||||||
Sbjct: 277 cgcttaggagatgg 290



to top

>gb|BT000150.1| Arabidopsis thaliana Unknown protein (At1g20260) mRNA, complete cds
          Length = 1541

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                       
Query: 28  ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgtaaacatc 87
           |||||| |||| ||| | |||||||| ||||| ||||| |||||||||||||| || || 
Sbjct: 79  ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgttaatatt 138

                         
Query: 88  cgattgggagatgg 101
           || || ||||||||
Sbjct: 139 cgcttaggagatgg 152



to top

>gb|AY062616.1| Arabidopsis thaliana Unknown protein (F14O10.13) mRNA, complete cds
          Length = 1816

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                       
Query: 28  ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgtaaacatc 87
           |||||| |||| ||| | |||||||| ||||| ||||| |||||||||||||| || || 
Sbjct: 217 ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgttaatatt 276

                         
Query: 88  cgattgggagatgg 101
           || || ||||||||
Sbjct: 277 cgcttaggagatgg 290



to top

>emb|BX818393.1|CNS0AAXF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL76ZG09 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1737

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                       
Query: 28  ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgtaaacatc 87
           |||||| |||| ||| | |||||||| ||||| ||||| |||||||||||||| || || 
Sbjct: 182 ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgttaatatt 241

                         
Query: 88  cgattgggagatgg 101
           || || ||||||||
Sbjct: 242 cgcttaggagatgg 255



to top

>dbj|AK176750.1| Arabidopsis thaliana mRNA for vacuolar-type H+-ATPase subunit B3
           (VHA-B3), complete cds, clone: RAFL25-28-P20
          Length = 1890

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                       
Query: 28  ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgtaaacatc 87
           |||||| |||| ||| | |||||||| ||||| ||||| |||||||||||||| || || 
Sbjct: 195 ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgttaatatt 254

                         
Query: 88  cgattgggagatgg 101
           || || ||||||||
Sbjct: 255 cgcttaggagatgg 268



to top

>dbj|AK176641.1| Arabidopsis thaliana mRNA for vacuolar-type H+-ATPase subunit B3
           (VHA-B3), complete cds, clone: RAFL25-17-J11
          Length = 1890

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                       
Query: 28  ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgtaaacatc 87
           |||||| |||| ||| | |||||||| ||||| ||||| |||||||||||||| || || 
Sbjct: 195 ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgttaatatt 254

                         
Query: 88  cgattgggagatgg 101
           || || ||||||||
Sbjct: 255 cgcttaggagatgg 268



to top

>dbj|AK176915.1| Arabidopsis thaliana mRNA for vacuolar-type H+-ATPase subunit B3
           (VHA-B3), complete cds, clone: RAFL25-49-G23
          Length = 1897

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                       
Query: 28  ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgtaaacatc 87
           |||||| |||| ||| | |||||||| ||||| ||||| |||||||||||||| || || 
Sbjct: 231 ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgttaatatt 290

                         
Query: 88  cgattgggagatgg 101
           || || ||||||||
Sbjct: 291 cgcttaggagatgg 304



to top

>dbj|AK176408.1| Arabidopsis thaliana mRNA for vacuolar-type H+-ATPase subunit B3
           (VHA-B3), complete cds, clone: RAFL24-13-A20
          Length = 1897

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                       
Query: 28  ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgtaaacatc 87
           |||||| |||| ||| | |||||||| ||||| ||||| |||||||||||||| || || 
Sbjct: 231 ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgttaatatt 290

                         
Query: 88  cgattgggagatgg 101
           || || ||||||||
Sbjct: 291 cgcttaggagatgg 304



to top

>dbj|AK175727.1| Arabidopsis thaliana mRNA for vacuolar-type H+-ATPase subunit B3
           (VHA-B3), complete cds, clone: RAFL22-27-D19
          Length = 1794

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                       
Query: 28  ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgtaaacatc 87
           |||||| |||| ||| | |||||||| ||||| ||||| |||||||||||||| || || 
Sbjct: 197 ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgttaatatt 256

                         
Query: 88  cgattgggagatgg 101
           || || ||||||||
Sbjct: 257 cgcttaggagatgg 270



to top

>dbj|AK175169.1| Arabidopsis thaliana mRNA for vacuolar-type H+-ATPase subunit B3
           (VHA-B3), complete cds, clone: RAFL21-58-M18
          Length = 1872

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                       
Query: 28  ggacctctggttatcttggacaaagtaaagggcccaaaataccaggagattgtaaacatc 87
           |||||| |||| ||| | |||||||| ||||| ||||| |||||||||||||| || || 
Sbjct: 205 ggacctttggtcatccttgacaaagtgaagggtccaaagtaccaggagattgttaatatt 264

                         
Query: 88  cgattgggagatgg 101
           || || ||||||||
Sbjct: 265 cgcttaggagatgg 278



to top

>dbj|AB024277.1| Citrus unshiu mRNA for vacuolar H+-ATPase B subunit, complete cds
          Length = 1899

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 109/137 (79%)
 Strand = Plus / Plus

                                                                       
Query: 31  cctctggttatcttggacaaagtaaagggcccaaaataccaggagattgtaaacatccga 90
           ||||| |||||| | || ||||| ||||| || |||||  | |||||||| || || || 
Sbjct: 144 cctctagttatccttgataaagtcaagggacccaaatattatgagattgtcaatattcgg 203

                                                                       
Query: 91  ttgggagatggcaccactcggcgtggtcaagttctggaagttgatggtgaaaaggctgtt 150
           ||||||||||| || |  || |||||||| || || ||||||||||| || || ||||||
Sbjct: 204 ttgggagatggaacaatgcgacgtggtcaggtcctagaagttgatggagagaaagctgtt 263

                            
Query: 151 gtgcangtcttcgaagg 167
           || || ||||| |||||
Sbjct: 264 gttcaggtctttgaagg 280



to top

>emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 89
          Length = 199789

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                       
Query: 112    cgtggtcaagttctggaagttgatggtgaaaaggctgttgt 152
              |||||||||||||| ||||||||||| || || ||||||||
Sbjct: 123367 cgtggtcaagttctcgaagttgatggagagaaagctgttgt 123327



to top

>emb|AL035539.1|ATF22I13 Arabidopsis thaliana DNA chromosome 4, BAC clone  F22I13 (ESSA project)
          Length = 93760

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 112   cgtggtcaagttctggaagttgatggtgaaaaggctgttgt 152
             |||||||||||||| ||||||||||| || || ||||||||
Sbjct: 82409 cgtggtcaagttctcgaagttgatggagagaaagctgttgt 82369



to top

>gb|AC069558.5|AC069558 Genomic Sequence For Arabidopsis thaliana Clone T5G13 From Chromosome
             IV, complete sequence
          Length = 107740

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 112   cgtggtcaagttctggaagttgatggtgaaaaggctgttgt 152
             |||||||||||||| ||||||||||| || || ||||||||
Sbjct: 42160 cgtggtcaagttctcgaagttgatggagagaaagctgttgt 42200



to top

>emb|AL035540.1|ATF20M13 Arabidopsis thaliana DNA chromosome 4, BAC clone  F20M13 (ESSA project)
          Length = 91938

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 112   cgtggtcaagttctggaagttgatggtgaaaaggctgttgt 152
             |||||||||||||| ||||||||||| || || ||||||||
Sbjct: 24308 cgtggtcaagttctcgaagttgatggagagaaagctgttgt 24268



to top

>gb|U07052.1|GHU07052 Gossypium hirsutum vacuolar H+-ATPase subunit B mRNA, complete cds
          Length = 2047

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 112 cgtggtcaagttctggaagttgatggtgaaaaggctgttgt 152
           ||||||||||| || ||||||||||| ||||| ||||||||
Sbjct: 309 cgtggtcaagtccttgaagttgatggagaaaaagctgttgt 349



to top

>gb|AC007396.6|AC007396 Genomic sequence for Arabidopsis thaliana BAC T4O12 from chromosome I,
             complete sequence
          Length = 95870

 Score = 48.1 bits (24), Expect = 0.009
 Identities = 81/100 (81%)
 Strand = Plus / Plus

                                                                         
Query: 56    agggcccaaaataccaggagattgtaaacatccgattgggagatggcaccactcggcgtg 115
             |||| ||||| |||||||||||||| || || || || ||||||||  | ||  | ||||
Sbjct: 83609 agggtccaaagtaccaggagattgttaatattcgcttaggagatggatcaacgagacgtg 83668

                                                     
Query: 116   gtcaagttctggaagttgatggtgaaaaggctgttgtgca 155
             |||| ||| ||||||||||||| || || || ||||||||
Sbjct: 83669 gtcaggttttggaagttgatggcgagaaagcagttgtgca 83708



to top

>dbj|AP001625.1| Homo sapiens genomic DNA, chromosome 21, clone:KB907F12, MX1-D21S171
             region, complete sequence
          Length = 130626

 Score = 42.1 bits (21), Expect = 0.54
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 124   ctggaagttgatggtgaaaag 144
             |||||||||||||||||||||
Sbjct: 14673 ctggaagttgatggtgaaaag 14653



to top

>dbj|BS000228.1| Pan troglodytes chromosome 22 clone:RP43-139F08, map 22, complete
             sequences
          Length = 160535

 Score = 42.1 bits (21), Expect = 0.54
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 124   ctggaagttgatggtgaaaag 144
             |||||||||||||||||||||
Sbjct: 99769 ctggaagttgatggtgaaaag 99749



to top

>dbj|AP001746.1| Homo sapiens genomic DNA, chromosome 21q, section 90/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 0.54
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 124    ctggaagttgatggtgaaaag 144
              |||||||||||||||||||||
Sbjct: 329826 ctggaagttgatggtgaaaag 329806



to top

>dbj|AP001624.1| Homo sapiens genomic DNA, chromosome 21, clone:KB994G8, MX1-D21S171
             region, complete sequence
          Length = 108500

 Score = 42.1 bits (21), Expect = 0.54
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 124   ctggaagttgatggtgaaaag 144
             |||||||||||||||||||||
Sbjct: 96792 ctggaagttgatggtgaaaag 96772



to top

>ref|XM_824139.1| Trypanosoma brucei TREU927 vacuolar ATP synthase subunit B
           (Tb11.01.3560) partial mRNA
          Length = 1488

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 124 ctggaagttgatggtgaaaaggctgttgtgca 155
           |||||||| || ||||| ||||||||||||||
Sbjct: 226 ctggaagtggacggtgataaggctgttgtgca 257



to top

>emb|BX323028.6| Zebrafish DNA sequence from clone DKEY-211A8 in linkage group 23,
             complete sequence
          Length = 97428

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    aaagtaaagggcccaaaata 68
             ||||||||||||||||||||
Sbjct: 82166 aaagtaaagggcccaaaata 82185



to top

>gb|AC100092.9| Mus musculus chromosome 3, clone RP23-37H10, complete sequence
          Length = 186799

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 47     acaaagtaaagggcccaaaa 66
              ||||||||||||||||||||
Sbjct: 153922 acaaagtaaagggcccaaaa 153903



to top

>emb|BX005025.16| Zebrafish DNA sequence from clone DKEY-67K20 in linkage group 8,
             complete sequence
          Length = 196375

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    aaagtaaagggcccaaaata 68
             ||||||||||||||||||||
Sbjct: 10967 aaagtaaagggcccaaaata 10948



to top

>emb|CR759748.6| Zebrafish DNA sequence from clone DKEYP-118G11 in linkage group 17,
            complete sequence
          Length = 165743

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 49   aaagtaaagggcccaaaata 68
            ||||||||||||||||||||
Sbjct: 4611 aaagtaaagggcccaaaata 4592



to top

>emb|BX248137.9| Zebrafish DNA sequence from clone DKEY-19L19, complete sequence
          Length = 209896

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     aaagtaaagggcccaaaata 68
              ||||||||||||||||||||
Sbjct: 111593 aaagtaaagggcccaaaata 111574



to top

>emb|BX005020.7| Zebrafish DNA sequence from clone DKEY-237D7 in linkage group 8, complete
              sequence
          Length = 202747

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     aaagtaaagggcccaaaata 68
              ||||||||||||||||||||
Sbjct: 191781 aaagtaaagggcccaaaata 191800



to top

>emb|BX510301.6| Zebrafish DNA sequence from clone CH211-215A10 in linkage group 19,
              complete sequence
          Length = 209585

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     aaagtaaagggcccaaaata 68
              ||||||||||||||||||||
Sbjct: 151489 aaagtaaagggcccaaaata 151470



to top

>emb|BX255897.3| Zebrafish DNA sequence from clone DKEY-263B2 in linkage group 20,
             complete sequence
          Length = 181862

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    aaagtaaagggcccaaaata 68
             ||||||||||||||||||||
Sbjct: 10451 aaagtaaagggcccaaaata 10470



to top

>emb|BX927281.25| Zebrafish DNA sequence from clone CH211-255P12 in linkage group 18,
              complete sequence
          Length = 151835

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     aaagtaaagggcccaaaata 68
              ||||||||||||||||||||
Sbjct: 144783 aaagtaaagggcccaaaata 144764



to top

>emb|CR381668.8| Zebrafish DNA sequence from clone CH211-238A12 in linkage group 18,
             complete sequence
          Length = 155228

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    aaagtaaagggcccaaaata 68
             ||||||||||||||||||||
Sbjct: 41034 aaagtaaagggcccaaaata 41015



 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    aaagtaaagggcccaaaata 68
             ||||||||||||||||||||
Sbjct: 35088 aaagtaaagggcccaaaata 35069



 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    aaagtaaagggcccaaaata 68
             ||||||||||||||||||||
Sbjct: 29140 aaagtaaagggcccaaaata 29121



to top

>emb|CR388173.7| Zebrafish DNA sequence from clone DKEYP-109D11 in linkage group 19,
           complete sequence
          Length = 55374

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 49  aaagtaaagggcccaaaata 68
           ||||||||||||||||||||
Sbjct: 350 aaagtaaagggcccaaaata 331



to top

>emb|BX571830.6| Zebrafish DNA sequence from clone DKEY-261I16 in linkage group 19,
            complete sequence
          Length = 143486

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   aaagtaaagggcccaaaata 68
            ||||||||||||||||||||
Sbjct: 1651 aaagtaaagggcccaaaata 1670



to top

>emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in linkage group 18,
              complete sequence
          Length = 248419

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     aaagtaaagggcccaaaata 68
              ||||||||||||||||||||
Sbjct: 196400 aaagtaaagggcccaaaata 196419



to top

>emb|AL935143.9| Zebrafish DNA sequence from clone CH211-192E21, complete sequence
          Length = 157691

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     aaagtaaagggcccaaaata 68
              ||||||||||||||||||||
Sbjct: 128692 aaagtaaagggcccaaaata 128673



to top

>dbj|AB036925.1| Citrus unshiu Cit-VATP B-1 gene for vacuolar H+-ATPase B subunit,
           partial cds
          Length = 2644

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                       
Query: 73  gagattgtaaacatccgattgggagatggcaccactcggcgtggtcaagttctggaagtt 132
           |||||||| || || || ||||||||||| || |  || |||||||| || || ||||||
Sbjct: 408 gagattgtcaatattcggttgggagatggaacaatgcgacgtggtcaggtcctagaagtt 467

                               
Query: 133 gatggtgaaaaggctgttgt 152
           ||||| || || ||||||||
Sbjct: 468 gatggagagaaagctgttgt 487



to top

>ref|XM_360324.1| Magnaporthe grisea 70-15 hypothetical protein (MG05698.4) partial
           mRNA
          Length = 1203

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 109 cggcgtggtcaagttctgg 127
           |||||||||||||||||||
Sbjct: 531 cggcgtggtcaagttctgg 549



to top

>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome
          Length = 1827111

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 117    tcaagttctggaagttgat 135
              |||||||||||||||||||
Sbjct: 968244 tcaagttctggaagttgat 968262



to top

>gb|AC123935.4| Mus musculus BAC clone RP23-354J3 from chromosome 13, complete sequence
          Length = 219370

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 124    ctggaagttgatggtgaaa 142
              |||||||||||||||||||
Sbjct: 196748 ctggaagttgatggtgaaa 196766



to top

>ref|XM_786517.1| PREDICTED: Strongylocentrotus purpuratus similar to CG17369-PB,
          isoform B (LOC586747), mRNA
          Length = 1365

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 28 ggacctctggttatcttggacaa 50
          ||||||||||||||| |||||||
Sbjct: 14 ggacctctggttatcctggacaa 36



to top

>gb|BC100631.1| Rattus norvegicus cDNA clone IMAGE:7938269, containing frame-shift
           errors
          Length = 3411

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 95  gagatggcaccactcggcg 113
           |||||||||||||||||||
Sbjct: 448 gagatggcaccactcggcg 466



to top

>dbj|AB210108.1| Rattus norvegicus Numb mRNA, complete cds
          Length = 1779

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 95  gagatggcaccactcggcg 113
           |||||||||||||||||||
Sbjct: 362 gagatggcaccactcggcg 380



to top

>gb|AY231438.1| Suaeda maritima subsp. salsa vacuolar H(+)-ATPase subunit B (VHA-B)
           mRNA, complete cds
          Length = 1974

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 127 gaagttgatggtgaaaaggctgt 149
           ||||||||||||||||| |||||
Sbjct: 213 gaagttgatggtgaaaaagctgt 235



to top

>gb|AC154290.1| Mus musculus BAC clone RP23-443K24 from chromosome 13, complete sequence
          Length = 193345

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 124    ctggaagttgatggtgaaa 142
              |||||||||||||||||||
Sbjct: 176032 ctggaagttgatggtgaaa 176014



to top

>gb|AC093401.4| Homo sapiens BAC clone RP11-93M19 from 2, complete sequence
          Length = 99088

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 54   aaagggcccaaaataccag 72
            |||||||||||||||||||
Sbjct: 7576 aaagggcccaaaataccag 7558



to top

>ref|NM_133287.1| Rattus norvegicus numb gene homolog (Drosophila) (Numb), mRNA
          Length = 1779

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 95  gagatggcaccactcggcg 113
           |||||||||||||||||||
Sbjct: 362 gagatggcaccactcggcg 380



to top

>gb|DQ336705.1| Rattus norvegicus numb isoform i/i mRNA, complete cds,
           alternatively spliced
          Length = 1974

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 95  gagatggcaccactcggcg 113
           |||||||||||||||||||
Sbjct: 396 gagatggcaccactcggcg 414



to top

>gb|DQ336704.1| Rattus norvegicus numb isoform o/i mRNA, complete cds,
           alternatively spliced
          Length = 1941

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 95  gagatggcaccactcggcg 113
           |||||||||||||||||||
Sbjct: 363 gagatggcaccactcggcg 381



to top

>gb|DQ336703.1| Rattus norvegicus numb isoform o/o mRNA, complete cds,
           alternatively spliced
          Length = 1794

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 95  gagatggcaccactcggcg 113
           |||||||||||||||||||
Sbjct: 363 gagatggcaccactcggcg 381



to top

>gb|DQ336702.1| Rattus norvegicus numb isoform i/o mRNA, complete cds,
           alternatively spliced
          Length = 1827

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 95  gagatggcaccactcggcg 113
           |||||||||||||||||||
Sbjct: 396 gagatggcaccactcggcg 414



to top

>gb|AC004050.1|AC004050 Homo sapiens chromosome 4 clone B207D4 map 4q25, complete sequence
          Length = 127098

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 119   aagttctggaagttgatgg 137
             |||||||||||||||||||
Sbjct: 59290 aagttctggaagttgatgg 59272


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,323,214
Number of Sequences: 3902068
Number of extensions: 1323214
Number of successful extensions: 103079
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102792
Number of HSP's gapped (non-prelim): 273
length of query: 172
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 150
effective length of database: 17,147,199,772
effective search space: 2572079965800
effective search space used: 2572079965800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
to top