ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags28h01 |
|---|---|
| Clone Library Name | barley_pub |
>UCR6_SOLTU (P48502) Ubiquinol-cytochrome c reductase complex 14 kDa protein| (EC 1.10.2.2) (CR14) Length = 123 Score = 129 bits (324), Expect = 2e-30 Identities = 60/98 (61%), Positives = 78/98 (79%) Frame = +2 Query: 5 SAFSQWFVNPRRNPLARIHMLTISNRLKNYGXXXXXXXXXXXXXXIKEALTRLPREVVDA 184 S+FS+W V+P++NPLA IHM T+S+RL+NYG +KEAL RLPRE+VDA Sbjct: 3 SSFSRWLVDPKKNPLAAIHMKTLSSRLRNYGLRHDDLYDPMYDLDVKEALNRLPREIVDA 62 Query: 185 RHQRLKRAMDLSMKHQYLPDDVRALQTPFKSYLSDMLA 298 R+QRL RAMDLSMKHQYLP+D++A+QTPF++YL +MLA Sbjct: 63 RNQRLLRAMDLSMKHQYLPEDLQAMQTPFRNYLQEMLA 100
>UCR6_MOUSE (Q9D855) Ubiquinol-cytochrome c reductase complex 14 kDa protein| (EC 1.10.2.2) (Complex III subunit VI) Length = 110 Score = 46.2 bits (108), Expect = 2e-05 Identities = 23/52 (44%), Positives = 32/52 (61%) Frame = +2 Query: 140 IKEALTRLPREVVDARHQRLKRAMDLSMKHQYLPDDVRALQTPFKSYLSDML 295 +KEA+ RLP ++ + R R+KRA+DL+M+HQ LP D K YL L Sbjct: 43 VKEAIRRLPEDLYNDRMLRIKRALDLTMRHQILPKDQWTKYEEDKFYLEPYL 94
>UCR6_BOVIN (P00129) Ubiquinol-cytochrome c reductase complex 14 kDa protein| (EC 1.10.2.2) (Complex III subunit VI) Length = 110 Score = 45.4 bits (106), Expect = 4e-05 Identities = 24/52 (46%), Positives = 31/52 (59%) Frame = +2 Query: 140 IKEALTRLPREVVDARHQRLKRAMDLSMKHQYLPDDVRALQTPFKSYLSDML 295 +KEA+ RLP + D R R+KRA+DLSM+ Q LP + KSYL L Sbjct: 43 VKEAIRRLPENLYDDRVFRIKRALDLSMRQQILPKEQWTKYEEDKSYLEPYL 94
>UCR6_PONPY (Q5RC24) Ubiquinol-cytochrome c reductase complex 14 kDa protein| (EC 1.10.2.2) (Complex III subunit VI) Length = 110 Score = 43.5 bits (101), Expect = 1e-04 Identities = 19/36 (52%), Positives = 27/36 (75%) Frame = +2 Query: 140 IKEALTRLPREVVDARHQRLKRAMDLSMKHQYLPDD 247 +KEA+ RLP + + R R+KRA+DLS+KHQ LP + Sbjct: 43 VKEAIRRLPENLYNDRMFRIKRALDLSLKHQILPKE 78
>UCR6_HUMAN (P14927) Ubiquinol-cytochrome c reductase complex 14 kDa protein| (EC 1.10.2.2) (Complex III subunit VI) (QP-C) Length = 110 Score = 42.4 bits (98), Expect = 3e-04 Identities = 18/36 (50%), Positives = 27/36 (75%) Frame = +2 Query: 140 IKEALTRLPREVVDARHQRLKRAMDLSMKHQYLPDD 247 +KEA+ RLP + + R R+KRA+DL++KHQ LP + Sbjct: 43 VKEAIRRLPENLYNDRMFRIKRALDLNLKHQILPKE 78
>UCR7_DEBHA (Q6BNQ5) Ubiquinol-cytochrome c reductase complex 14 kDa protein| (EC 1.10.2.2) (Complex III subunit VII) Length = 126 Score = 30.4 bits (67), Expect = 1.2 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +2 Query: 140 IKEALTRLPREVVDARHQRLKRAMDLSMKHQYLP 241 +++A++RLP E + AR+ R A S+ HQ LP Sbjct: 55 MQKAISRLPDEEIYARNYRFITAHQCSLSHQLLP 88
>RPN1_CANGA (Q6FPV6) 26S proteasome regulatory subunit RPN1| Length = 983 Score = 29.6 bits (65), Expect = 2.0 Identities = 15/49 (30%), Positives = 30/49 (61%) Frame = +2 Query: 146 EALTRLPREVVDARHQRLKRAMDLSMKHQYLPDDVRALQTPFKSYLSDM 292 EA+ +LP+ V + ++R+ + M ++ P+D+ LQT + YLS++ Sbjct: 226 EAIEKLPQFVDENTYKRVCQYMIACVQLLPPPEDISFLQTAYSIYLSEL 274
>UCR7_SCHPO (O74533) Probable ubiquinol-cytochrome c reductase complex 14 kDa| protein (EC 1.10.2.2) (Complex III subunit VII) Length = 137 Score = 29.6 bits (65), Expect = 2.0 Identities = 18/52 (34%), Positives = 29/52 (55%) Frame = +2 Query: 143 KEALTRLPREVVDARHQRLKRAMDLSMKHQYLPDDVRALQTPFKSYLSDMLA 298 ++AL+RLP+ R R++RAM LS++++ LP YL +LA Sbjct: 52 QKALSRLPKMESYDRVYRIRRAMQLSIENKILPKSEWTKPEEDYHYLRPVLA 103
>UCR6_SCHMA (O01374) Ubiquinol-cytochrome c reductase complex 14 kDa protein| (EC 1.10.2.2) Length = 130 Score = 29.6 bits (65), Expect = 2.0 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +2 Query: 146 EALTRLPREVVDARHQRLKRAMDLSMKHQYLPDD 247 EAL RLPRE+ +AR R+ RA L LP + Sbjct: 57 EALRRLPRELQEARDFRIARASLLYASKHVLPKE 90
>BFSP1_CHICK (Q06637) Filensin (Beaded filament structural protein 1) (Lens| fiber cell beaded-filament structural protein CP 95) (CP95) Length = 657 Score = 28.5 bits (62), Expect = 4.5 Identities = 16/51 (31%), Positives = 29/51 (56%) Frame = +2 Query: 140 IKEALTRLPREVVDARHQRLKRAMDLSMKHQYLPDDVRALQTPFKSYLSDM 292 +KE L RL +E +A L ++L ++ Q+L DD+ A + +K L ++ Sbjct: 135 LKETLERLNKEADEA----LLCNLELQIESQFLQDDINATKDRYKKNLMEI 181
>UCR7_ASHGO (Q751U4) Ubiquinol-cytochrome c reductase complex 14 kDa protein| (EC 1.10.2.2) (Complex III subunit VII) Length = 126 Score = 28.5 bits (62), Expect = 4.5 Identities = 18/48 (37%), Positives = 23/48 (47%) Frame = +2 Query: 140 IKEALTRLPREVVDARHQRLKRAMDLSMKHQYLPDDVRALQTPFKSYL 283 ++ AL RLP E AR R+ +A L + H LP KSYL Sbjct: 56 VQTALRRLPEEESYARVFRIIQAHQLELTHHLLPKHKWTKPEEDKSYL 103
>UCR7_KLULA (P49345) Ubiquinol-cytochrome c reductase complex 14 kDa protein| (EC 1.10.2.2) (Complex III subunit VII) Length = 127 Score = 28.1 bits (61), Expect = 5.9 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = +2 Query: 149 ALTRLPREVVDARHQRLKRAMDLSMKHQYLPDD 247 AL RLP + AR R+ A LS+ H LP D Sbjct: 59 ALRRLPADESYARIYRIINAHQLSLSHHLLPKD 91 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,251,642 Number of Sequences: 219361 Number of extensions: 285400 Number of successful extensions: 1200 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1162 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1200 length of database: 80,573,946 effective HSP length: 75 effective length of database: 64,121,871 effective search space used: 1538924904 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
