>AGRN_RAT (P25304) Agrin precursor|
          Length = 1959

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
 Frame = +3

Query: 513 CKYSCLYSEIFLS----PVCGCGRIVCRYLLHSVCALIGQ*YMCSWW 641
           C  +C ++ + LS    P C C R+ C      VCA  G  Y    W
Sbjct: 290 CPETCQFNSVCLSRRGRPHCSCDRVTCDGSYRPVCAQDGHTYNNDCW 336

>AGRN_HUMAN (O00468) Agrin precursor|
          Length = 2045

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
 Frame = +3

Query: 513 CKYSCLYSEIFLS----PVCGCGRIVCRYLLHSVCALIGQ*YMCSWW 641
           C   C ++ + LS    P C C R+ C      VCA  G+ Y    W
Sbjct: 395 CPEPCRFNAVCLSRRGRPRCSCDRVTCDGAYRPVCAQDGRTYDSDCW 441

>DSBD_NEIMA (Q9JTL9) Thiol:disulfide interchange protein dsbD precursor (EC|
           1.8.1.8) (Protein-disulfide reductase) (Disulfide
           reductase)
          Length = 601

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 23/69 (33%), Positives = 35/69 (50%)
 Frame = -1

Query: 348 FVLKAVDVQLLSLYFSLVGIVSWLGKQLLGHYITVADLLSHSMMFNY*HK*QLHRQINIY 169
           FVL  V VQ LSL ++LVGIV+ L   LL  ++  A ++  +          +    NI 
Sbjct: 231 FVLSVVYVQGLSLTYTLVGIVAGLTGALLTVWLQQAWVVLAASALMVVLALSMFGLFNIQ 290

Query: 168 TPSSMFGYF 142
            P+++  YF
Sbjct: 291 LPNAVQSYF 299


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,263,327
Number of Sequences: 219361
Number of extensions: 1675389
Number of successful extensions: 3223
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3223
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 5972710590
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)