ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags28d01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|CR381680.5| Zebrafish DNA sequence from clone DKEY-253G8 in ... 44 0.56
2emb|BX511093.3| Zebrafish DNA sequence from clone CH211-194C21 i... 44 0.56
3gb|AY350715.1| Arabidopsis arenosa clone BAC Aer1B10, complete s... 42 2.2
4gb|AC013287.11| Homo sapiens chromosome 10 clone RP11-76F14, com... 42 2.2
5gb|AC025599.8| Homo sapiens chromosome 8, clone RP11-508K19, com... 42 2.2
6dbj|AP003390.1| Homo sapiens genomic DNA, chromosome 11q clone:C... 42 2.2
7gb|AC020580.11|AC020580 Arabidopsis thaliana chromosome 3 BAC F5... 42 2.2
8emb|BX248410.4| Zebrafish DNA sequence from clone DKEY-65M5 in l... 42 2.2
9emb|AL442007.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 2.2
10dbj|AP003393.1| Homo sapiens genomic DNA, chromosome 11q clone:R... 42 2.2
11gb|AF526381.3| Bovine viral diarrhea virus 1 strain ZM-95, compl... 40 8.8
12gb|AC104911.10| Mus musculus chromosome 3, clone RP23-427B4, com... 40 8.8
13ref|XM_422197.1| PREDICTED: Gallus gallus similar to abnormal sp... 40 8.8
14gb|AC167241.2| Mus musculus BAC clone RP24-560M14 from chromosom... 40 8.8
15gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.8
16gb|AC129328.4| Mus musculus BAC clone RP23-15O6 from chromosome ... 40 8.8
17gb|AC004381.1|HUAC004381 Homo sapiens Chromosome 16 BAC clone CI... 40 8.8
18gb|AC125168.4| Mus musculus BAC clone RP24-449N2 from chromosome... 40 8.8
19gb|AC099414.4| Mus musculus BAC clone RP23-122C18 from 3, comple... 40 8.8
20gb|AC152176.5| Medicago truncatula clone mth2-65c4, complete seq... 40 8.8
21gb|AC123525.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
22gb|AC162611.2| Mus musculus chromosome 3, clone RP24-86E1, compl... 40 8.8
23gb|AC098614.3| Homo sapiens chromosome 3 clone RP11-222K16, comp... 40 8.8
24gb|AF265664.1| Solanum tuberosum resistance gene cluster, comple... 40 8.8
25gb|AC105730.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
26gb|AC117220.4| Mus musculus BAC clone RP23-344H17 from chromosom... 40 8.8
27gb|AC020926.8| Homo sapiens chromosome 16 clone CTD-2152G12, com... 40 8.8
28dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
29dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
30dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
31dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
32emb|BX323008.5| Zebrafish DNA sequence from clone DKEY-29D16 in ... 40 8.8
33dbj|AP003054.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
34dbj|AP003555.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 8.8
35gb|AF050756.1|AF050756 Ricinus communis cysteine endopeptidase p... 40 8.8
36gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
37gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
38emb|BX000509.2|CNS08CDZ Oryza sativa chromosome 12, . BAC OJ1085... 40 8.8
39emb|BX000495.1|CNS08CDL Oryza sativa chromosome 12, . BAC OSJNBb... 40 8.8
40gb|AC154200.1| Mus musculus BAC clone RP24-81G10 from 17, comple... 40 8.8
41emb|AL929247.5| Zebrafish DNA sequence from clone CH211-152J7 in... 40 8.8
42gb|AC151298.3| Mus musculus BAC clone RP23-7F9 from chromosome 1... 40 8.8
43gb|AC170884.3| Mus musculus BAC clone RP24-111L17 from chromosom... 40 8.8
44emb|AL662932.10| Mouse DNA sequence from clone RP23-15B7 on chro... 40 8.8 
>emb|CR381680.5| Zebrafish DNA sequence from clone DKEY-253G8 in linkage group 5,
             complete sequence
          Length = 47558

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 610   taattggtcaatgatatatgtgttct 635
             ||||||||||||||||||| ||||||
Sbjct: 15259 taattggtcaatgatatatctgttct 15234
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>emb|BX511093.3| Zebrafish DNA sequence from clone CH211-194C21 in linkage group 1,
             complete sequence
          Length = 211586

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 40    aatcatttgaaactttgactgt 61
             ||||||||||||||||||||||
Sbjct: 66063 aatcatttgaaactttgactgt 66042
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>gb|AY350715.1| Arabidopsis arenosa clone BAC Aer1B10, complete sequence
          Length = 78945

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 524   ctgtttgtattcagagatttt 544
             |||||||||||||||||||||
Sbjct: 70469 ctgtttgtattcagagatttt 70489
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>gb|AC013287.11| Homo sapiens chromosome 10 clone RP11-76F14, complete sequence
          Length = 174578

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 295    aactagtgaaaaatataggct 315
              |||||||||||||||||||||
Sbjct: 167157 aactagtgaaaaatataggct 167177
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>gb|AC025599.8| Homo sapiens chromosome 8, clone RP11-508K19, complete sequence
          Length = 158330

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 447    attcttatactttgttaattt 467
              |||||||||||||||||||||
Sbjct: 118734 attcttatactttgttaattt 118754
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>dbj|AP003390.1| Homo sapiens genomic DNA, chromosome 11q clone:CTD-2523D13, complete
             sequences
          Length = 221091

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 109   tttttcttgcaagttatgtga 129
             |||||||||||||||||||||
Sbjct: 38632 tttttcttgcaagttatgtga 38652
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>gb|AC020580.11|AC020580 Arabidopsis thaliana chromosome 3 BAC F5E6 genomic sequence, complete
             sequence
          Length = 94704

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 510   ttctgtaaatatagctgtttgtatt 534
             |||||||||||||| ||||||||||
Sbjct: 88682 ttctgtaaatatagatgtttgtatt 88706
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>emb|BX248410.4| Zebrafish DNA sequence from clone DKEY-65M5 in linkage group 4,
             complete sequence
          Length = 250665

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 577   tatgtagatatttattacatt 597
             |||||||||||||||||||||
Sbjct: 27690 tatgtagatatttattacatt 27670
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>emb|AL442007.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0212B02, complete
             sequence
          Length = 118971

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 453   atactttgttaatttgttagc 473
             |||||||||||||||||||||
Sbjct: 49007 atactttgttaatttgttagc 48987
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>dbj|AP003393.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-196E1, complete
              sequences
          Length = 174303

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 109    tttttcttgcaagttatgtga 129
              |||||||||||||||||||||
Sbjct: 161711 tttttcttgcaagttatgtga 161731
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>gb|AF526381.3| Bovine viral diarrhea virus 1 strain ZM-95, complete genome
          Length = 12220

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 265  aagctgcttccccaaccatg 284
            ||||||||||||||||||||
Sbjct: 1769 aagctgcttccccaaccatg 1750
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>gb|AC104911.10| Mus musculus chromosome 3, clone RP23-427B4, complete sequence
          Length = 190932

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    gagtaatgtcatttggtttt 112
             ||||||||||||||||||||
Sbjct: 39834 gagtaatgtcatttggtttt 39815
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>ref|XM_422197.1| PREDICTED: Gallus gallus similar to abnormal spindle (LOC424354),
            mRNA
          Length = 9220

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 233  agtaaatctgccacagtaat 252
            ||||||||||||||||||||
Sbjct: 4061 agtaaatctgccacagtaat 4080
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>gb|AC167241.2| Mus musculus BAC clone RP24-560M14 from chromosome 17, complete sequence
          Length = 184079

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 578    atgtagatatttattacatt 597
              ||||||||||||||||||||
Sbjct: 162555 atgtagatatttattacatt 162574
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 35      tggtcaatcatttgaaactttgac 58
               ||||||||| ||||||||||||||
Sbjct: 3055057 tggtcaatcttttgaaactttgac 3055080
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>gb|AC129328.4| Mus musculus BAC clone RP23-15O6 from chromosome 17, complete sequence
          Length = 234041

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 286    cactattccaactagtgaaaaata 309
              |||||||||||||| |||||||||
Sbjct: 193589 cactattccaactattgaaaaata 193612



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 286    cactattccaactagtgaaaaata 309
              |||||||||||||| |||||||||
Sbjct: 131500 cactattccaactattgaaaaata 131523



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 286   cactattccaactagtgaaaaata 309
             |||||||||||||| |||||||||
Sbjct: 75925 cactattccaactattgaaaaata 75948



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 286   cactattccaactagtgaaaaata 309
             |||||||||||||| |||||||||
Sbjct: 18044 cactattccaactattgaaaaata 18067
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>gb|AC004381.1|HUAC004381 Homo sapiens Chromosome 16 BAC clone CIT987SK-44M2, complete sequence
          Length = 213541

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   ttgtgctagtagttaaacat 219
             ||||||||||||||||||||
Sbjct: 60798 ttgtgctagtagttaaacat 60779
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>gb|AC125168.4| Mus musculus BAC clone RP24-449N2 from chromosome 3, complete sequence
          Length = 166604

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 530   gtattcagagatttttctat 549
             ||||||||||||||||||||
Sbjct: 47366 gtattcagagatttttctat 47347
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>gb|AC099414.4| Mus musculus BAC clone RP23-122C18 from 3, complete sequence
          Length = 203057

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 530   gtattcagagatttttctat 549
             ||||||||||||||||||||
Sbjct: 42155 gtattcagagatttttctat 42174
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>gb|AC152176.5| Medicago truncatula clone mth2-65c4, complete sequence
          Length = 161536

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 609    ctaattggtcaatgatatat 628
              ||||||||||||||||||||
Sbjct: 114590 ctaattggtcaatgatatat 114571
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>gb|AC123525.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0056E15, complete sequence
          Length = 147941

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 452   tatactttgttaatttgttagctg 475
             ||||||||||||||| ||||||||
Sbjct: 89245 tatactttgttaattagttagctg 89268
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>gb|AC162611.2| Mus musculus chromosome 3, clone RP24-86E1, complete sequence
          Length = 229643

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    gagtaatgtcatttggtttt 112
             ||||||||||||||||||||
Sbjct: 86046 gagtaatgtcatttggtttt 86065
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>gb|AC098614.3| Homo sapiens chromosome 3 clone RP11-222K16, complete sequence
          Length = 200379

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 66     aaagttacactggtatttga 85
              ||||||||||||||||||||
Sbjct: 130153 aaagttacactggtatttga 130172
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>gb|AF265664.1| Solanum tuberosum resistance gene cluster, complete sequence
          Length = 187352

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 572    aattgtatgtagatatttat 591
              ||||||||||||||||||||
Sbjct: 160227 aattgtatgtagatatttat 160208
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>gb|AC105730.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0011L14, complete sequence
          Length = 117974

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 35    tggtcaatcatttgaaactttgac 58
             ||||||||| ||||||||||||||
Sbjct: 41204 tggtcaatcttttgaaactttgac 41181
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>gb|AC117220.4| Mus musculus BAC clone RP23-344H17 from chromosome 17, complete sequence
          Length = 187691

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 286    cactattccaactagtgaaaaata 309
              |||||||||||||| |||||||||
Sbjct: 169972 cactattccaactattgaaaaata 169995



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 286    cactattccaactagtgaaaaata 309
              |||||||||||||| |||||||||
Sbjct: 112090 cactattccaactattgaaaaata 112113



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 286   cactattccaactagtgaaaaata 309
             |||||||||||||| |||||||||
Sbjct: 54937 cactattccaactattgaaaaata 54960



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 286  cactattccaactagtgaaaaata 309
            |||||||||||||| |||||||||
Sbjct: 2164 cactattccaactattgaaaaata 2187
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>gb|AC020926.8| Homo sapiens chromosome 16 clone CTD-2152G12, complete sequence
          Length = 93288

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   ttgtgctagtagttaaacat 219
             ||||||||||||||||||||
Sbjct: 79932 ttgtgctagtagttaaacat 79913
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 452     tatactttgttaatttgttagctg 475
               ||||||||||||||| ||||||||
Sbjct: 1181083 tatactttgttaattagttagctg 1181060
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 452     tatactttgttaatttgttagctg 475
               ||||||||||||||| ||||||||
Sbjct: 1301370 tatactttgttaattagttagctg 1301347
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 35      tggtcaatcatttgaaactttgac 58
               ||||||||| ||||||||||||||
Sbjct: 3055168 tggtcaatcttttgaaactttgac 3055191
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 447      attcttatactttgttaatt 466
                ||||||||||||||||||||
Sbjct: 17549080 attcttatactttgttaatt 17549099
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>emb|BX323008.5| Zebrafish DNA sequence from clone DKEY-29D16 in linkage group 1,
            complete sequence
          Length = 216850

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 42   tcatttgaaactttgactgt 61
            ||||||||||||||||||||
Sbjct: 6201 tcatttgaaactttgactgt 6182
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>dbj|AP003054.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0436D06
          Length = 148246

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 447   attcttatactttgttaatt 466
             ||||||||||||||||||||
Sbjct: 66652 attcttatactttgttaatt 66671
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>dbj|AP003555.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-626H12, complete
             sequence
          Length = 121600

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 377   gaggcaggggccacaaggca 396
             ||||||||||||||||||||
Sbjct: 68118 gaggcaggggccacaaggca 68137
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>gb|AF050756.1|AF050756 Ricinus communis cysteine endopeptidase precursor (CysEP) mRNA,
           complete cds
          Length = 1270

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 210 agttaaacatcatagaatgt 229
           ||||||||||||||||||||
Sbjct: 343 agttaaacatcatagaatgt 362
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 452     tatactttgttaatttgttagctg 475
               ||||||||||||||| ||||||||
Sbjct: 1299091 tatactttgttaattagttagctg 1299068
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 452     tatactttgttaatttgttagctg 475
               ||||||||||||||| ||||||||
Sbjct: 1181083 tatactttgttaattagttagctg 1181060
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>emb|BX000509.2|CNS08CDZ Oryza sativa chromosome 12, . BAC OJ1085_G07 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 121556

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 452    tatactttgttaatttgttagctg 475
              ||||||||||||||| ||||||||
Sbjct: 111699 tatactttgttaattagttagctg 111722
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>emb|BX000495.1|CNS08CDL Oryza sativa chromosome 12, . BAC OSJNBb0119L20 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 126974

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 452    tatactttgttaatttgttagctg 475
              ||||||||||||||| ||||||||
Sbjct: 120066 tatactttgttaattagttagctg 120043
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>gb|AC154200.1| Mus musculus BAC clone RP24-81G10 from 17, complete sequence
          Length = 216721

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 286   cactattccaactagtgaaaaata 309
             |||||||||||||| |||||||||
Sbjct: 38030 cactattccaactattgaaaaata 38053
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>emb|AL929247.5| Zebrafish DNA sequence from clone CH211-152J7 in linkage group 3,
             complete sequence
          Length = 145564

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 179   atttgtcgatgtaactgctatttg 202
             |||||||||||||||||| |||||
Sbjct: 17647 atttgtcgatgtaactgcaatttg 17624
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>gb|AC151298.3| Mus musculus BAC clone RP23-7F9 from chromosome 17, complete sequence
          Length = 198349

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 286   cactattccaactagtgaaaaata 309
             |||||||||||||| |||||||||
Sbjct: 78710 cactattccaactattgaaaaata 78687



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 286   cactattccaactagtgaaaaata 309
             |||||||||||||| |||||||||
Sbjct: 17592 cactattccaactattgaaaaata 17569
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>gb|AC170884.3| Mus musculus BAC clone RP24-111L17 from chromosome 17, complete
             sequence
          Length = 180189

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 578   atgtagatatttattacatt 597
             ||||||||||||||||||||
Sbjct: 95688 atgtagatatttattacatt 95707
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>emb|AL662932.10| Mouse DNA sequence from clone RP23-15B7 on chromosome X, complete
             sequence
          Length = 218740

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 450   cttatactttgttaatttgt 469
             ||||||||||||||||||||
Sbjct: 50377 cttatactttgttaatttgt 50358


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,330,575
Number of Sequences: 3902068
Number of extensions: 6330575
Number of successful extensions: 125682
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 125263
Number of HSP's gapped (non-prelim): 419
length of query: 642
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 619
effective length of database: 17,143,297,704
effective search space: 10611701278776
effective search space used: 10611701278776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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