Clone Information

BLAST Search Result

Clone Name	bags28c15
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RLA0_ORYSA (P41095) 60S acidic ribosomal protein P0	145	3e-35
2	RLA0_SOYBN (P50346) 60S acidic ribosomal protein P0	138	3e-33
3	RLA0C_ARATH (P57691) 60S acidic ribosomal protein P0-C	136	1e-32
4	RLA0B_ARATH (Q42112) 60S acidic ribosomal protein P0-B	136	1e-32
5	RLA0A_ARATH (O04204) 60S acidic ribosomal protein P0-A	135	3e-32
6	RLA0_MAIZE (O24573) 60S acidic ribosomal protein P0	135	3e-32
7	RLA0_CHERU (P29764) 60S acidic ribosomal protein P0 (Light-induc...	130	1e-30
8	RLA0_LUPLU (P50345) 60S acidic ribosomal protein P0	110	9e-25
9	RLA0_CERCA (Q9U3U0) 60S acidic ribosomal protein P0 (CcP0)	101	4e-22
10	RLA0_CAEEL (Q93572) 60S acidic ribosomal protein P0	101	6e-22
11	RLA0_DROME (P19889) 60S acidic ribosomal protein P0 (DNA-(apurin...	100	2e-21
12	RLA0_ICTPU (Q90YX1) 60S acidic ribosomal protein P0 (L10E)	96	2e-20
13	RLA0_RANSY (Q9DG68) 60S acidic ribosomal protein P0 (L10E)	96	3e-20
14	RLA0_RAT (P19945) 60S acidic ribosomal protein P0 (L10E)	94	7e-20
15	RLA0_HUMAN (P05388) 60S acidic ribosomal protein P0 (L10E)	94	1e-19
16	RLA0_CHICK (P47826) 60S acidic ribosomal protein P0 (L10E)	93	2e-19
17	RLA0_MOUSE (P14869) 60S acidic ribosomal protein P0 (L10E)	93	2e-19
18	RLA0_BRARE (Q9PV90) 60S acidic ribosomal protein P0 (L10E)	92	4e-19
19	RLA0_BOVIN (Q95140) 60S acidic ribosomal protein P0 (L10E) (Frag...	91	6e-19
20	RLA0_YEAST (P05317) 60S acidic ribosomal protein P0 (L10E)	83	2e-16
21	RLA0_DICDI (P22685) 60S acidic ribosomal protein P0	82	4e-16
22	RLA0_EIMTE (Q967Y7) 60S acidic ribosomal protein P0	81	6e-16
23	RLA0_NEUCR (Q96TJ5) 60S acidic ribosomal protein P0	79	3e-15
24	RLA0_SCHPO (O74864) 60S acidic ribosomal protein P0	79	3e-15
25	RLA0_PODAN (Q9C3Z6) 60S acidic ribosomal protein P0	78	5e-15
26	RLA0_PLAF8 (Q94660) 60S acidic ribosomal protein P0	64	1e-10
27	RLA0_TRYCR (P26796) 60S acidic ribosomal protein P0	62	4e-10
28	RLA0_LEICH (P39096) 60S acidic ribosomal protein P0	54	1e-07
29	RLA0_LEIIN (P39097) 60S acidic ribosomal protein P0	54	1e-07
30	RLA0_METVO (Q9Y8J3) Acidic ribosomal protein P0 homolog (L10E) (...	48	6e-06
31	RLA0_METJA (P54049) Acidic ribosomal protein P0 homolog (L10E)	48	6e-06
32	RLA0_HALSA (P13553) Acidic ribosomal protein P0 homolog (L10E)	45	5e-05
33	RLA0_HALVO (P41198) Acidic ribosomal protein P0 homolog (L10E)	44	8e-05
34	RLA0_PYRHO (O74109) Acidic ribosomal protein P0 homolog (L10E)	44	1e-04
35	RLA0_PYRFU (Q8TZJ8) Acidic ribosomal protein P0 homolog (L10E)	43	2e-04
36	RLA0_METVA (P15826) Acidic ribosomal protein P0 homolog (L10E) (...	43	2e-04
37	RLA0_PYRAB (Q9UXS5) Acidic ribosomal protein P0 homolog (L10E)	42	3e-04
38	RLA0_HALMA (P15825) 50S ribosomal protein L10E (Ribosomal protei...	41	7e-04
39	RLA0_ARCFU (O28781) Acidic ribosomal protein P0 homolog (L10E)	41	9e-04
40	RLA0_THEVO (Q97BN3) Acidic ribosomal protein P0 homolog (L10E)	40	0.001
41	RLA0_THEAC (P57692) Acidic ribosomal protein P0 homolog (L10E)	37	0.013
42	RLA0_SULTO (Q971J2) Acidic ribosomal protein P0 homolog (L10E)	33	0.19
43	RLA0_SULAC (P35023) Acidic ribosomal protein P0 homolog (L10E) (...	30	2.1
44	MRT4_CANGA (Q6FJ04) mRNA turnover protein 4 homolog	29	2.7
45	RGA2_SCHPO (Q10164) Probable Rho-type GTPase-activating protein 2	29	2.7
46	Y1513_METJA (Q58908) Hypothetical protein MJ1513	29	3.5
47	IL12A_PAPAN (Q865Y2) Interleukin-12 alpha chain precursor (IL-12...	29	3.5
48	RLA0_AERPE (Q9Y9W8) Acidic ribosomal protein P0 homolog (L10E)	28	4.6

>RLA0_ORYSA (P41095) 60S acidic ribosomal protein P0|
          Length = 318

 Score =  145 bits (366), Expect = 3e-35
 Identities = 77/96 (80%), Positives = 79/96 (82%)
 Frame = +2

Query: 2   PPXINKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXX 181
           P  INKGTVEI  PVELIKKGDKVGSSESALLAKLGIRPFSYGLVI NVYDSGSVFSP  
Sbjct: 146 PTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSGSVFSPEV 205

Query: 182 XXXXXXXXXXKFASGVSMVASLSLAISYPTMAAAPH 289
                     KFASGVSMVAS+SLAISYPT+AAAPH
Sbjct: 206 LDLTEDDLMEKFASGVSMVASVSLAISYPTIAAAPH 241

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>RLA0_SOYBN (P50346) 60S acidic ribosomal protein P0|
          Length = 320

 Score =  138 bits (348), Expect = 3e-33
 Identities = 71/96 (73%), Positives = 78/96 (81%)
 Frame = +2

Query: 2   PPXINKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXX 181
           P  INKGTVEI  PVELI+KGDKVGSSE+ALLAKLGIRPFSYGLV+ +VYD+GSVFSP  
Sbjct: 147 PTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPEV 206

Query: 182 XXXXXXXXXXKFASGVSMVASLSLAISYPTMAAAPH 289
                     KFA+GVSMV SLSLAISYPT+AAAPH
Sbjct: 207 LDLTEDDLIGKFAAGVSMVTSLSLAISYPTLAAAPH 242

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>RLA0C_ARATH (P57691) 60S acidic ribosomal protein P0-C|
          Length = 323

 Score =  136 bits (343), Expect = 1e-32
 Identities = 69/96 (71%), Positives = 78/96 (81%)
 Frame = +2

Query: 2   PPXINKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXX 181
           P  INKGTVEI  PVELIK+GDKVGSSE+ALLAKLGIRPFSYGLV+ +VYD+GSVFSP  
Sbjct: 146 PTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYGLVVQSVYDNGSVFSPEV 205

Query: 182 XXXXXXXXXXKFASGVSMVASLSLAISYPTMAAAPH 289
                     KFASG+SMV SL+LA+SYPT+AAAPH
Sbjct: 206 LDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPH 241

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>RLA0B_ARATH (Q42112) 60S acidic ribosomal protein P0-B|
          Length = 320

 Score =  136 bits (343), Expect = 1e-32
 Identities = 69/96 (71%), Positives = 78/96 (81%)
 Frame = +2

Query: 2   PPXINKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXX 181
           P  INKGTVEI  PVELIK+GDKVGSSE+ALLAKLGIRPFSYGLV+ +VYD+GSVFSP  
Sbjct: 146 PTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYGLVVQSVYDNGSVFSPEV 205

Query: 182 XXXXXXXXXXKFASGVSMVASLSLAISYPTMAAAPH 289
                     KFASG+SMV SL+LA+SYPT+AAAPH
Sbjct: 206 LDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPH 241

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>RLA0A_ARATH (O04204) 60S acidic ribosomal protein P0-A|
          Length = 317

 Score =  135 bits (340), Expect = 3e-32
 Identities = 69/96 (71%), Positives = 78/96 (81%)
 Frame = +2

Query: 2   PPXINKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXX 181
           P  INKGTVEI  PVELIKKGDKVGSSE+ALLAKLGIRPFSYGLV+ +VYD+GSVF+P  
Sbjct: 147 PTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVESVYDNGSVFNPEV 206

Query: 182 XXXXXXXXXXKFASGVSMVASLSLAISYPTMAAAPH 289
                     KFA+GVSM+ +LSLAISYPT+AAAPH
Sbjct: 207 LNLTEDDLVEKFAAGVSMITALSLAISYPTVAAAPH 242

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>RLA0_MAIZE (O24573) 60S acidic ribosomal protein P0|
          Length = 318

 Score =  135 bits (339), Expect = 3e-32
 Identities = 70/96 (72%), Positives = 76/96 (79%)
 Frame = +2

Query: 2   PPXINKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXX 181
           P  INKGTVEI  PVELIKKG+KVGSSESALLAKLGIRPFSYGL + +VY+ GSVFSP  
Sbjct: 146 PTKINKGTVEIITPVELIKKGEKVGSSESALLAKLGIRPFSYGLQVTSVYEDGSVFSPEV 205

Query: 182 XXXXXXXXXXKFASGVSMVASLSLAISYPTMAAAPH 289
                     KFA+GVSMVASLSLAISYPT+AA PH
Sbjct: 206 LDLSEEDLIEKFATGVSMVASLSLAISYPTLAAVPH 241

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>RLA0_CHERU (P29764) 60S acidic ribosomal protein P0 (Light-induced 34 kDa|
           protein)
          Length = 321

 Score =  130 bits (326), Expect = 1e-30
 Identities = 68/96 (70%), Positives = 75/96 (78%)
 Frame = +2

Query: 2   PPXINKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXX 181
           P  INKGTVEI   VELIKKG+KVGSSE+ALLAKLGIRPFSYGL + +VYD GSVFSP  
Sbjct: 147 PTKINKGTVEIITAVELIKKGEKVGSSEAALLAKLGIRPFSYGLNVESVYDDGSVFSPEV 206

Query: 182 XXXXXXXXXXKFASGVSMVASLSLAISYPTMAAAPH 289
                     +FA+GVSMV SLSLAISYPT+AAAPH
Sbjct: 207 LDLTEDDLLARFATGVSMVTSLSLAISYPTLAAAPH 242

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>RLA0_LUPLU (P50345) 60S acidic ribosomal protein P0|
          Length = 322

 Score =  110 bits (275), Expect = 9e-25
 Identities = 59/96 (61%), Positives = 65/96 (67%)
 Frame = +2

Query: 2   PPXINKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXX 181
           P  INKGTVEI  PVELIKKGDKVGSSE+ALLAKLGIRPFSYGLV+ +VYD+GSVF P  
Sbjct: 147 PTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFKPEV 206

Query: 182 XXXXXXXXXXKFASGVSMVASLSLAISYPTMAAAPH 289
                     KFA GVS       +   P  +AAPH
Sbjct: 207 LDLTEDDLLEKFAIGVSQCYFSDTSHFIPNPSAAPH 242

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>RLA0_CERCA (Q9U3U0) 60S acidic ribosomal protein P0 (CcP0)|
          Length = 317

 Score =  101 bits (252), Expect = 4e-22
 Identities = 51/96 (53%), Positives = 65/96 (67%)
 Frame = +2

Query: 2   PPXINKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXX 181
           P  I+KGT+EI   V ++K GDKVG+SE+ LL  L I PFSYGL I  VYDSGS+FSP  
Sbjct: 144 PTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLAITQVYDSGSIFSPEI 203

Query: 182 XXXXXXXXXXKFASGVSMVASLSLAISYPTMAAAPH 289
                     KF +GV+ +A++SL I YPT+A+APH
Sbjct: 204 LDIKPEDLRAKFQAGVANLAAVSLQIGYPTIASAPH 239

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>RLA0_CAEEL (Q93572) 60S acidic ribosomal protein P0|
          Length = 311

 Score =  101 bits (251), Expect = 6e-22
 Identities = 50/96 (52%), Positives = 66/96 (68%)
 Frame = +2

Query: 2   PPXINKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXX 181
           P  I +GT+EI   V LIK+GDKVG+SESALL  LG+ PFSYGLV+  VYD G++++P  
Sbjct: 143 PTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGVTPFSYGLVVRQVYDDGTLYTPEV 202

Query: 182 XXXXXXXXXXKFASGVSMVASLSLAISYPTMAAAPH 289
                     +F SGV  VAS+SLA++YPT+A+  H
Sbjct: 203 LDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVAH 238

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>RLA0_DROME (P19889) 60S acidic ribosomal protein P0 (DNA-(apurinic or|
           apyrimidinic site) lyase) (EC 4.2.99.18)
           (Apurinic-apyrimidinic endonuclease)
          Length = 317

 Score = 99.8 bits (247), Expect = 2e-21
 Identities = 48/96 (50%), Positives = 65/96 (67%)
 Frame = +2

Query: 2   PPXINKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXX 181
           P  I+KGT+EI   V ++K GDKVG+SE+ LL  L I PFSYGL++  VYDSGS+FSP  
Sbjct: 144 PTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSIFSPEI 203

Query: 182 XXXXXXXXXXKFASGVSMVASLSLAISYPTMAAAPH 289
                     KF  GV+ +A++ L++ YPT+A+APH
Sbjct: 204 LDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPH 239

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>RLA0_ICTPU (Q90YX1) 60S acidic ribosomal protein P0 (L10E)|
          Length = 317

 Score = 95.9 bits (237), Expect = 2e-20
 Identities = 47/93 (50%), Positives = 62/93 (66%)
 Frame = +2

Query: 11  INKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXXXXX 190
           I++GT+EI   V+LI+ GDKVG+SE+ LL  L I PFSYGL+I  VYD+GSV+SP     
Sbjct: 147 ISRGTIEILSDVQLIRPGDKVGASEATLLNMLNISPFSYGLIIQQVYDNGSVYSPEVLDI 206

Query: 191 XXXXXXXKFASGVSMVASLSLAISYPTMAAAPH 289
                  +F  GV  +AS+ L I YPT+A+ PH
Sbjct: 207 TEDALHKRFLEGVRNIASVCLQIGYPTLASIPH 239

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>RLA0_RANSY (Q9DG68) 60S acidic ribosomal protein P0 (L10E)|
          Length = 315

 Score = 95.5 bits (236), Expect = 3e-20
 Identities = 46/93 (49%), Positives = 62/93 (66%)
 Frame = +2

Query: 11  INKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXXXXX 190
           I++GT+EI   V+LIK GDKVG+SE+ LL  L I PFS+GL+I  VYD+GS++SP     
Sbjct: 147 ISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVYDNGSIYSPEVLDI 206

Query: 191 XXXXXXXKFASGVSMVASLSLAISYPTMAAAPH 289
                  +F  GV  +AS+ L I YPT+A+ PH
Sbjct: 207 TEDALRARFLEGVRNIASVCLQIGYPTVASVPH 239

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>RLA0_RAT (P19945) 60S acidic ribosomal protein P0 (L10E)|
          Length = 317

 Score = 94.4 bits (233), Expect = 7e-20
 Identities = 46/93 (49%), Positives = 62/93 (66%)
 Frame = +2

Query: 11  INKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXXXXX 190
           I++GT+EI   V+LIK GDKVG+SE+ LL  L I PFS+GL+I  V+D+GS++SP     
Sbjct: 147 ISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDNGSIYSPEVLDI 206

Query: 191 XXXXXXXKFASGVSMVASLSLAISYPTMAAAPH 289
                  +F  GV  VAS+ L I YPT+A+ PH
Sbjct: 207 TEQALHTRFLEGVRNVASVCLQIGYPTVASVPH 239

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>RLA0_HUMAN (P05388) 60S acidic ribosomal protein P0 (L10E)|
          Length = 317

 Score = 93.6 bits (231), Expect = 1e-19
 Identities = 46/93 (49%), Positives = 62/93 (66%)
 Frame = +2

Query: 11  INKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXXXXX 190
           I++GT+EI   V+LIK GDKVG+SE+ LL  L I PFS+GLVI  V+D+GS+++P     
Sbjct: 147 ISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDI 206

Query: 191 XXXXXXXKFASGVSMVASLSLAISYPTMAAAPH 289
                  +F  GV  VAS+ L I YPT+A+ PH
Sbjct: 207 TEETLHSRFLEGVRNVASVCLQIGYPTVASVPH 239

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>RLA0_CHICK (P47826) 60S acidic ribosomal protein P0 (L10E)|
          Length = 316

 Score = 93.2 bits (230), Expect = 2e-19
 Identities = 46/93 (49%), Positives = 62/93 (66%)
 Frame = +2

Query: 11  INKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXXXXX 190
           I++GT+EI   V+LIK GDKVG+SE+ LL  L I PFS+GLVI  V+D+GS+++P     
Sbjct: 147 ISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDI 206

Query: 191 XXXXXXXKFASGVSMVASLSLAISYPTMAAAPH 289
                  +F  GV  VAS+ L I YPT+A+ PH
Sbjct: 207 TEETLHKRFLEGVRNVASVCLQIGYPTIASVPH 239

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>RLA0_MOUSE (P14869) 60S acidic ribosomal protein P0 (L10E)|
          Length = 317

 Score = 93.2 bits (230), Expect = 2e-19
 Identities = 45/93 (48%), Positives = 62/93 (66%)
 Frame = +2

Query: 11  INKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXXXXX 190
           I++GT+EI   V+LIK GDKVG+SE+ LL  L I PFS+GL+I  V+D+GS+++P     
Sbjct: 147 ISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDNGSIYNPEVLDI 206

Query: 191 XXXXXXXKFASGVSMVASLSLAISYPTMAAAPH 289
                  +F  GV  VAS+ L I YPT+A+ PH
Sbjct: 207 TEQALHSRFLEGVRNVASVCLQIGYPTVASVPH 239

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>RLA0_BRARE (Q9PV90) 60S acidic ribosomal protein P0 (L10E)|
          Length = 319

 Score = 91.7 bits (226), Expect = 4e-19
 Identities = 48/96 (50%), Positives = 62/96 (64%), Gaps = 3/96 (3%)
 Frame = +2

Query: 11  INKGTVEITIPVELIKKGDKVGSSESALLAKLG---IRPFSYGLVICNVYDSGSVFSPXX 181
           I++GT+EI   V+LIK GDKVG+SE+ LL  L    I PFSYGL+I  VYD+GSV+SP  
Sbjct: 147 ISRGTIEILSDVQLIKPGDKVGASEATLLNMLNMLNISPFSYGLIIQQVYDNGSVYSPEV 206

Query: 182 XXXXXXXXXXKFASGVSMVASLSLAISYPTMAAAPH 289
                     +F  GV  +AS+ L I YPT+A+ PH
Sbjct: 207 LDITEDALHKRFLKGVRNIASVCLQIGYPTLASIPH 242

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>RLA0_BOVIN (Q95140) 60S acidic ribosomal protein P0 (L10E) (Fragment)|
          Length = 309

 Score = 91.3 bits (225), Expect = 6e-19
 Identities = 45/93 (48%), Positives = 61/93 (65%)
 Frame = +2

Query: 11  INKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXXXXX 190
           I++GT+EI   V+LIK GDK G+SE+ LL  L I PFS+GLVI  V+D+GS+++P     
Sbjct: 138 ISRGTIEILSDVQLIKTGDKEGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDI 197

Query: 191 XXXXXXXKFASGVSMVASLSLAISYPTMAAAPH 289
                  +F  GV  VAS+ L I YPT+A+ PH
Sbjct: 198 TEETLHSRFLEGVRNVASVCLQIGYPTVASVPH 230

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>RLA0_YEAST (P05317) 60S acidic ribosomal protein P0 (L10E)|
          Length = 312

 Score = 83.2 bits (204), Expect = 2e-16
 Identities = 41/96 (42%), Positives = 57/96 (59%)
 Frame = +2

Query: 2   PPXINKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXX 181
           P  I +GT+EI   V+++  G+KVG SE++LL  L I PF++GL +  VYD+G VF    
Sbjct: 142 PTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLLNISPFTFGLTVVQVYDNGQVFPSSI 201

Query: 182 XXXXXXXXXXKFASGVSMVASLSLAISYPTMAAAPH 289
                      F S VS +AS+SLAI YPT+ +  H
Sbjct: 202 LDITDEELVSHFVSAVSTIASISLAIGYPTLPSVGH 237

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>RLA0_DICDI (P22685) 60S acidic ribosomal protein P0|
          Length = 305

 Score = 82.0 bits (201), Expect = 4e-16
 Identities = 41/93 (44%), Positives = 59/93 (63%)
 Frame = +2

Query: 11  INKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXXXXX 190
           IN+G ++I   V +IK G KVG+SE+ LL KL I+PF+YGL    +YD+G+ +SP     
Sbjct: 146 INRGQIDIVNEVHIIKTGQKVGASEATLLQKLNIKPFTYGLEPKIIYDAGACYSP---SI 202

Query: 191 XXXXXXXKFASGVSMVASLSLAISYPTMAAAPH 289
                  KF  G+  +A++SL I YPT+A+ PH
Sbjct: 203 SEEDLINKFKQGIFNIAAISLEIGYPTVASIPH 235

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>RLA0_EIMTE (Q967Y7) 60S acidic ribosomal protein P0|
          Length = 314

 Score = 81.3 bits (199), Expect = 6e-16
 Identities = 40/93 (43%), Positives = 61/93 (65%)
 Frame = +2

Query: 11  INKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXXXXX 190
           I KG +EI   V+LI++G++V +S + LL KL ++PF+YGL + +VYD+GSV+S      
Sbjct: 146 IVKGQIEIQQAVQLIRRGERVSASAATLLHKLSVKPFTYGLKVEHVYDNGSVYSASVLDI 205

Query: 191 XXXXXXXKFASGVSMVASLSLAISYPTMAAAPH 289
                   FA+G + VA++S A+  P+ AAAPH
Sbjct: 206 TDEQILEAFAAGAANVAAVSRAVGLPSAAAAPH 238

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>RLA0_NEUCR (Q96TJ5) 60S acidic ribosomal protein P0|
          Length = 313

 Score = 79.0 bits (193), Expect = 3e-15
 Identities = 38/96 (39%), Positives = 58/96 (60%)
 Frame = +2

Query: 2   PPXINKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXX 181
           P  I +GT+EIT  ++L++ G KVG SE+ LL  L I PF+YG+ I  VYD G+ F    
Sbjct: 142 PTKIARGTIEITTDLKLVEAGAKVGPSEATLLNMLNISPFTYGMGIAQVYDQGNTFPSDV 201

Query: 182 XXXXXXXXXXKFASGVSMVASLSLAISYPTMAAAPH 289
                      F++ ++ +ASLSLA+++PT+ +  H
Sbjct: 202 LDISEEQLLKAFSTAITTIASLSLALNFPTLPSVIH 237

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>RLA0_SCHPO (O74864) 60S acidic ribosomal protein P0|
          Length = 312

 Score = 79.0 bits (193), Expect = 3e-15
 Identities = 38/96 (39%), Positives = 54/96 (56%)
 Frame = +2

Query: 2   PPXINKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXX 181
           P  I +GT+EIT  V L+ K  KVG SE+ LL  L I PF+YG+ +  +YD G+VFSP  
Sbjct: 142 PTKITRGTIEITSDVHLVSKDAKVGPSEATLLNMLNISPFTYGMDVLTIYDQGNVFSPEI 201

Query: 182 XXXXXXXXXXKFASGVSMVASLSLAISYPTMAAAPH 289
                        S  S++ ++SL  +YPT+ +  H
Sbjct: 202 LDVSEEDLIGHLLSAASIITAISLGANYPTILSVMH 237

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>RLA0_PODAN (Q9C3Z6) 60S acidic ribosomal protein P0|
          Length = 314

 Score = 78.2 bits (191), Expect = 5e-15
 Identities = 37/96 (38%), Positives = 58/96 (60%)
 Frame = +2

Query: 2   PPXINKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXX 181
           P  I +GT+EIT  ++L++ G KVG SE+ LL  L I PF+YG+ I  VYD G+ F    
Sbjct: 142 PTKIARGTIEITTDLKLVEAGAKVGPSEATLLNMLNISPFTYGMGIAQVYDQGNTFPSSV 201

Query: 182 XXXXXXXXXXKFASGVSMVASLSLAISYPTMAAAPH 289
                      F+S ++ +A++SLA+++PT+ +  H
Sbjct: 202 LDISEEQLLKAFSSAITTIAAVSLALNFPTLPSVIH 237

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>RLA0_PLAF8 (Q94660) 60S acidic ribosomal protein P0|
          Length = 316

 Score = 63.5 bits (153), Expect = 1e-10
 Identities = 38/93 (40%), Positives = 51/93 (54%)
 Frame = +2

Query: 11  INKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXXXXX 190
           I KG +EI   V LIK+G+KV +S + LL K  + P SYG+ +  VYD G ++       
Sbjct: 148 IVKGQIEIQEHVHLIKQGEKVTASSATLLRKFNMNP-SYGVDVRTVYDDGVIYDAKVLDI 206

Query: 191 XXXXXXXKFASGVSMVASLSLAISYPTMAAAPH 289
                  KF+ GVS VA+LS A    T A+ PH
Sbjct: 207 TDEDILEKFSKGVSNVAALSRATGVITEASYPH 239

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>RLA0_TRYCR (P26796) 60S acidic ribosomal protein P0|
          Length = 323

 Score = 62.0 bits (149), Expect = 4e-10
 Identities = 35/93 (37%), Positives = 48/93 (51%)
 Frame = +2

Query: 11  INKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXXXXX 190
           I KGTVEI    +++  GD+V +S + LL KL I PF Y + + +V+D G +F       
Sbjct: 154 IAKGTVEIVSDKKVLSVGDRVDNSTATLLQKLDISPFYYQVEVQSVWDRGMLFLREDLSI 213

Query: 191 XXXXXXXKFASGVSMVASLSLAISYPTMAAAPH 289
                      G+S VA+LSL    PT A  PH
Sbjct: 214 TDDVVEKYLLEGISNVAALSLGAGIPTAATLPH 246

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>RLA0_LEICH (P39096) 60S acidic ribosomal protein P0|
          Length = 322

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 30/87 (34%), Positives = 45/87 (51%)
 Frame = +2

Query: 11  INKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXXXXX 190
           I KG VEI    +++  GDKV +S + LL KL I PF Y + + +V+D G +F+      
Sbjct: 153 IAKGMVEIVTEKKVLSVGDKVDNSTATLLQKLNISPFYYQVNVLSVWDRGVLFTREDLMM 212

Query: 191 XXXXXXXKFASGVSMVASLSLAISYPT 271
                      G+S VA+++L    PT
Sbjct: 213 TEDMVEKMLMEGLSNVAAMALGAGIPT 239

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>RLA0_LEIIN (P39097) 60S acidic ribosomal protein P0|
          Length = 323

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 30/87 (34%), Positives = 45/87 (51%)
 Frame = +2

Query: 11  INKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXXXXX 190
           I KG VEI    +++  GDKV +S + LL KL I PF Y + + +V+D G +F+      
Sbjct: 154 IAKGMVEIVTEKKVLSVGDKVDNSTATLLQKLNISPFYYQVNVLSVWDRGVLFTREDLMM 213

Query: 191 XXXXXXXKFASGVSMVASLSLAISYPT 271
                      G+S VA+++L    PT
Sbjct: 214 TEDMVEKMLMEGLSNVAAMALGAGIPT 240

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>RLA0_METVO (Q9Y8J3) Acidic ribosomal protein P0 homolog (L10E) (Fragment)|
          Length = 297

 Score = 48.1 bits (113), Expect = 6e-06
 Identities = 28/92 (30%), Positives = 42/92 (45%)
 Frame = +2

Query: 2   PPXINKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXX 181
           P  I KG + I     + K+GD V +  + +L+KL I+P   GL +  VY+ G V+ P  
Sbjct: 151 PAAIEKGKIGIKEDTIVAKEGDVVSAKLAVVLSKLDIKPMEVGLNVLGVYEDGIVYDPEI 210

Query: 182 XXXXXXXXXXKFASGVSMVASLSLAISYPTMA 277
                     K  S  +   +LS+    PT A
Sbjct: 211 LKIDEDEFLAKLQSAYTGAFNLSVNAVIPTSA 242

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>RLA0_METJA (P54049) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 338

 Score = 48.1 bits (113), Expect = 6e-06
 Identities = 26/95 (27%), Positives = 42/95 (44%)
 Frame = +2

Query: 2   PPXINKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXX 181
           P  I KG + I     ++KKG+ V    +A+L +LGI+P   GL I  VY+ G +++P  
Sbjct: 150 PAAIEKGKIAIKEDKVVVKKGEVVSPKLAAVLDRLGIKPIKVGLNILAVYEDGIIYTPDV 209

Query: 182 XXXXXXXXXXKFASGVSMVASLSLAISYPTMAAAP 286
                        +      +L+   +YP     P
Sbjct: 210 LKVDEEKLLADIQAAYQNAFNLAFNTAYPAKEVLP 244

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>RLA0_HALSA (P13553) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 352

 Score = 45.1 bits (105), Expect = 5e-05
 Identities = 24/92 (26%), Positives = 44/92 (47%)
 Frame = +2

Query: 11  INKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXXXXX 190
           I +G++++     + ++G+ V    S +L++LGI P   GL +  V+  G +F+P     
Sbjct: 151 IQEGSIQVLDDSVVTEEGETVSDDVSNVLSELGIEPKEVGLDLRGVFSEGVLFTPEELEI 210

Query: 191 XXXXXXXKFASGVSMVASLSLAISYPTMAAAP 286
                     S  +   +LS+  +YPT   AP
Sbjct: 211 DVDEYRADIQSAAASARNLSVNAAYPTERTAP 242

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>RLA0_HALVO (P41198) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 350

 Score = 44.3 bits (103), Expect = 8e-05
 Identities = 25/92 (27%), Positives = 41/92 (44%)
 Frame = +2

Query: 11  INKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXXXXX 190
           I  G++ +T    ++ +G++V    + +LA+LGI P   GL +  V+  G +F P     
Sbjct: 151 IMDGSIMVTEDSNVLSEGEEVSEELANVLAELGIEPKEVGLDLRGVFSEGVLFEPDELAI 210

Query: 191 XXXXXXXKFASGVSMVASLSLAISYPTMAAAP 286
                     S      +LS+   YPT   AP
Sbjct: 211 DVDEYRADIQSASPAATNLSVNAVYPTAQTAP 242

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>RLA0_PYRHO (O74109) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 342

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 25/90 (27%), Positives = 40/90 (44%)
 Frame = +2

Query: 2   PPXINKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXX 181
           P  I KG V I     ++K G+ +    + +L  LGI+P   GL +  VY+ G V++P  
Sbjct: 146 PARIEKGKVTIQKDTTVLKAGEVITPELANILNALGIQPLEVGLDVLAVYEDGIVYTPDV 205

Query: 182 XXXXXXXXXXKFASGVSMVASLSLAISYPT 271
                               +L++ I+YPT
Sbjct: 206 LAIDEQEYIDMLQKAYMHAFNLAVNIAYPT 235

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>RLA0_PYRFU (Q8TZJ8) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 339

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 23/90 (25%), Positives = 41/90 (45%)
 Frame = +2

Query: 2   PPXINKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXX 181
           P  I +G V I     ++K G+++    + +L  LGI+P   GL +  VY+ G +++P  
Sbjct: 146 PARIERGKVTIQKDTVVLKAGEEITPELANILNALGIQPLEVGLDLLAVYEDGIIYTPDV 205

Query: 182 XXXXXXXXXXKFASGVSMVASLSLAISYPT 271
                               +L++ I+YPT
Sbjct: 206 LAIDESEYINMLQKAYMHAFNLAVNIAYPT 235

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>RLA0_METVA (P15826) Acidic ribosomal protein P0 homolog (L10E) (ML2)|
          Length = 336

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 24/92 (26%), Positives = 42/92 (45%)
 Frame = +2

Query: 2   PPXINKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXX 181
           P  I+KG + I     + K+GD +    + +L+ LGI+P + GL +  VY+ G +++   
Sbjct: 151 PAAIDKGKIGIKEDKVVAKEGDVISPKLAVVLSALGIKPVTVGLNVLGVYEEGVIYTSDV 210

Query: 182 XXXXXXXXXXKFASGVSMVASLSLAISYPTMA 277
                     K     +   +LS+    PT A
Sbjct: 211 LRIDEEEFLGKLQKAYTNAFNLSVNAVIPTSA 242

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>RLA0_PYRAB (Q9UXS5) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 341

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 24/90 (26%), Positives = 40/90 (44%)
 Frame = +2

Query: 2   PPXINKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXX 181
           P  I +G V I     ++K G+ +    + +L  LGI+P   GL +  VY+ G V++P  
Sbjct: 146 PARIERGKVTIQKDTTVLKAGEVITPELANILNALGIQPLEVGLDVLAVYEDGIVYTPDV 205

Query: 182 XXXXXXXXXXKFASGVSMVASLSLAISYPT 271
                               +L++ I+YPT
Sbjct: 206 LAIDEQEYIDMVQKAYMHAFNLAVNIAYPT 235

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>RLA0_HALMA (P15825) 50S ribosomal protein L10E (Ribosomal protein L10) (Acidic|
           ribosomal protein P0 homolog) (L10E) (HMal10)
          Length = 348

 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 23/92 (25%), Positives = 40/92 (43%)
 Frame = +2

Query: 11  INKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXXXXX 190
           I +G++++     ++  G++V    S +L +LGI P   GL +  V+  G +F P     
Sbjct: 151 IQEGSIQVLSDSTVLDTGEEVSQELSNVLNELGIEPKEVGLDLRAVFADGVLFEPEELEL 210

Query: 191 XXXXXXXKFASGVSMVASLSLAISYPTMAAAP 286
                     +      +LS+   YPT   AP
Sbjct: 211 DIDEYRSDIQAAAGRAFNLSVNADYPTATTAP 242

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>RLA0_ARCFU (O28781) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 339

 Score = 40.8 bits (94), Expect = 9e-04
 Identities = 24/94 (25%), Positives = 39/94 (41%)
 Frame = +2

Query: 2   PPXINKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXX 181
           P  I KG V +     ++K G+ V    +  L +L I+P   GL +  + DSG + +P  
Sbjct: 144 PVAIEKGKVVVKATTTVVKAGEVVRPEVARALERLDIKPIKIGLDVKAMLDSGVILTPET 203

Query: 182 XXXXXXXXXXKFASGVSMVASLSLAISYPTMAAA 283
                      F     M  +L++  +Y T   A
Sbjct: 204 LAIDTEKVLEDFQRAYQMALNLAVNSAYVTEETA 237

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>RLA0_THEVO (Q97BN3) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 314

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 20/82 (24%), Positives = 37/82 (45%)
 Frame = +2

Query: 11  INKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXXXXX 190
           + KG + I     L+KKG+ +   ++ ++A L I+P   GL +  +Y  G ++S      
Sbjct: 144 VEKGKIAIKKEAVLVKKGEVIPKDKAKIMAMLDIKPLEVGLELLGLYSDGVLYSADVLSL 203

Query: 191 XXXXXXXKFASGVSMVASLSLA 256
                  + A G +    +S A
Sbjct: 204 TPEKIAEQMAIGYAQALQISKA 225

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>RLA0_THEAC (P57692) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 314

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +2

Query: 11  INKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFS 172
           + KG + I      +KKG+ +   ++ +L  L I+P   GL +  +Y  G V+S
Sbjct: 144 VEKGKIAIKKETVFVKKGETIPKDKAKILEMLEIKPLEVGLQLLGLYSEGVVYS 197

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>RLA0_SULTO (Q971J2) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 337

 Score = 33.1 bits (74), Expect = 0.19
 Identities = 20/86 (23%), Positives = 31/86 (36%)
 Frame = +2

Query: 11  INKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSVFSPXXXXX 190
           +  G + +T    + K GD +      +L KLGI P    L I   YD+G +        
Sbjct: 152 VQDGKIHVTQDTVIAKPGDPIPPDAIPILQKLGIMPVHIKLNIKVAYDNGLIIPGNQLSI 211

Query: 191 XXXXXXXKFASGVSMVASLSLAISYP 268
                             L++ I+YP
Sbjct: 212 NLDDYKTDIMKAYQSAFGLAVEIAYP 237

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>RLA0_SULAC (P35023) Acidic ribosomal protein P0 homolog (L10E) (Ribosomal|
           protein L10)
          Length = 335

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +2

Query: 11  INKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGSV 166
           +  G + I     + K GD++ +    +L KLGI P    L I   YD+G +
Sbjct: 151 VQDGKIHILQDTTVAKPGDEIPADIVPILQKLGIMPVYVKLNIKIAYDNGVI 202

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>MRT4_CANGA (Q6FJ04) mRNA turnover protein 4 homolog|
          Length = 239

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 13/54 (24%), Positives = 27/54 (50%)
 Frame = +2

Query: 2   PPXINKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSGS 163
           P  I  G + +  P  + K+G K+   ++ +L + G+    + ++I   YD+ S
Sbjct: 172 PTKIKAGKITLEAPYLVCKEGQKLDVRQALILKQFGVALAQFKVIISAYYDNES 225

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>RGA2_SCHPO (Q10164) Probable Rho-type GTPase-activating protein 2|
          Length = 1275

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = -2

Query: 135 TSPYEKGRI-PSLASRADSEEPTLSPFLISSTGMVISTVPLLXL 7
           +SPYEKG++ P ++ ++  + PT S  + SS     S+V L  L
Sbjct: 142 SSPYEKGKLFPKISLKSSKDVPTASAHISSSDHEKSSSVSLSAL 185

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>Y1513_METJA (Q58908) Hypothetical protein MJ1513|
          Length = 335

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +2

Query: 11  INKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSY 127
           +NK  VE  + +ELI+K +K+G S+   +++ G    +Y
Sbjct: 295 VNKNVVEKLLELELIEKPEKIGKSKYIRISEKGKMLLNY 333

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>IL12A_PAPAN (Q865Y2) Interleukin-12 alpha chain precursor (IL-12A) (Cytotoxic|
           lymphocyte maturation factor 35 kDa subunit) (CLMF p35)
          Length = 219

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
 Frame = +2

Query: 23  TVEITIPVELIKKGDKVGSSESALLAK---LGIRPFSYGLVIC--NVYDSGSVF 169
           TVE  +P+ELIK    + S E++++ K   L  R  S+ + +C  ++Y+   ++
Sbjct: 81  TVEACLPLELIKNESCLNSRETSVITKGSCLASRKTSFMMALCLRSIYEDLQIY 134

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>RLA0_AERPE (Q9Y9W8) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 344

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = +2

Query: 11  INKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLVICNVYDSG 160
           +  G + I     + K GD +    + LL  LGIRP   G+ +    D G
Sbjct: 158 VRGGKIYIAKETVVAKPGDVISEDLAGLLMALGIRPIEKGVRVKFAIDGG 207


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,380,970
Number of Sequences: 219361
Number of extensions: 794950
Number of successful extensions: 2298
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 2230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2294
length of database: 80,573,946
effective HSP length: 71
effective length of database: 64,999,315
effective search space used: 1559983560
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result