ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags28b23 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_196510.1| Oryza sativa (japonica cultivar-group) putative epimerase/dehydratase (OSJNBa0061K21.15), mRNA Length = 1137 Score = 708 bits (357), Expect = 0.0 Identities = 522/577 (90%) Strand = Plus / Plus Query: 16 agctggtggtttcattggatcccatattgctcgccgcctgaagagtgaggggcactacat 75 |||||||||||||||||||||||| ||||||||||| |||||||| |||||||| ||||| Sbjct: 108 agctggtggtttcattggatcccacattgctcgccgtctgaagagcgaggggcattacat 167 Query: 76 cattgcctctgactggaagaagaacgagcatatgaccgaggacatgttctgccatgagtt 135 ||| ||||| |||||||||||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 168 catcgcctccgactggaagaagaatgagcacatgactgaggacatgttctgccatgagtt 227 Query: 136 ccaccttgctgacctcagggtcatggacaactgccttaaggtcaccaccaacgtcgacca 195 |||||||| |||||| |||||||||||||||||||| |||||||||| | ||||||||| Sbjct: 228 ccaccttgttgaccttagggtcatggacaactgcctcaaggtcaccaacggcgtcgacca 287 Query: 196 tgtcttcaatcttgctgctgatatgggaggcatggggttcattcagtccaaccactctgt 255 ||| ||||| ||||| ||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 288 tgtgttcaaccttgccgctgatatgggtggtatggggttcattcagtccaaccactctgt 347 Query: 256 tatcatgtacaataacaccatgatcagtttcaacatgcttgaggccgggcgtatcaacgg 315 ||||||||||| |||||||||||||||||||||||||| ||||| | |||||||| || Sbjct: 348 gatcatgtacaacaacaccatgatcagtttcaacatgctcgaggctgcacgtatcaatgg 407 Query: 316 tgtgaagaggttcttctatgcctcgagcgcatgcatctaccctgaattcaaacagcttga 375 |||||||||||||||||||||||| || |||||||| |||||||||||||| |||||||| Sbjct: 408 tgtgaagaggttcttctatgcctcaagtgcatgcatttaccctgaattcaagcagcttga 467 Query: 376 gacaaatgtgagcttgaaggaagctgatgcctggcctgctgagccacaagatgcctatgg 435 || || || ||| |||||||| |||||||||||||||||||||| |||||||||||||| Sbjct: 468 aactaacgttagcctgaaggaatctgatgcctggcctgctgagcctcaagatgcctatgg 527 Query: 436 cttggagaagctcgcgaccgaggagctgtgcaagcactacaccaaggactttgacattga 495 ||||||||||| || || |||||||| ||||||||||||||||||||||||| |||||| Sbjct: 528 tttggagaagcttgcaactgaggagctctgcaagcactacaccaaggactttggcattga 587 Query: 496 gtgccgtattggccgttttcacaacatttatggtccctttggaacatggaaaggcggtcg 555 ||||||| ||||||| || |||||||| ||||| |||||||||||||||||||| || || Sbjct: 588 gtgccgtgttggccgcttccacaacatatatggcccctttggaacatggaaaggtggccg 647 Query: 556 cgagaaggcaccagctgccttctgtagaaaggctcag 592 ||||||||||||||||| ||||| || ||||||||| Sbjct: 648 tgagaaggcaccagctgcattctgcaggaaggctcag 684
>dbj|AB193582.1| Oryza sativa (japonica cultivar-group) OsGME-1 mRNA for GDP-mannose-3'',5''-epimerase, complete cds Length = 1212 Score = 708 bits (357), Expect = 0.0 Identities = 522/577 (90%) Strand = Plus / Plus Query: 16 agctggtggtttcattggatcccatattgctcgccgcctgaagagtgaggggcactacat 75 |||||||||||||||||||||||| ||||||||||| |||||||| |||||||| ||||| Sbjct: 144 agctggtggtttcattggatcccacattgctcgccgtctgaagagcgaggggcattacat 203 Query: 76 cattgcctctgactggaagaagaacgagcatatgaccgaggacatgttctgccatgagtt 135 ||| ||||| |||||||||||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 204 catcgcctccgactggaagaagaatgagcacatgactgaggacatgttctgccatgagtt 263 Query: 136 ccaccttgctgacctcagggtcatggacaactgccttaaggtcaccaccaacgtcgacca 195 |||||||| |||||| |||||||||||||||||||| |||||||||| | ||||||||| Sbjct: 264 ccaccttgttgaccttagggtcatggacaactgcctcaaggtcaccaacggcgtcgacca 323 Query: 196 tgtcttcaatcttgctgctgatatgggaggcatggggttcattcagtccaaccactctgt 255 ||| ||||| ||||| ||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 324 tgtgttcaaccttgccgctgatatgggtggtatggggttcattcagtccaaccactctgt 383 Query: 256 tatcatgtacaataacaccatgatcagtttcaacatgcttgaggccgggcgtatcaacgg 315 ||||||||||| |||||||||||||||||||||||||| ||||| | |||||||| || Sbjct: 384 gatcatgtacaacaacaccatgatcagtttcaacatgctcgaggctgcacgtatcaatgg 443 Query: 316 tgtgaagaggttcttctatgcctcgagcgcatgcatctaccctgaattcaaacagcttga 375 |||||||||||||||||||||||| || |||||||| |||||||||||||| |||||||| Sbjct: 444 tgtgaagaggttcttctatgcctcaagtgcatgcatttaccctgaattcaagcagcttga 503 Query: 376 gacaaatgtgagcttgaaggaagctgatgcctggcctgctgagccacaagatgcctatgg 435 || || || ||| |||||||| |||||||||||||||||||||| |||||||||||||| Sbjct: 504 aactaacgttagcctgaaggaatctgatgcctggcctgctgagcctcaagatgcctatgg 563 Query: 436 cttggagaagctcgcgaccgaggagctgtgcaagcactacaccaaggactttgacattga 495 ||||||||||| || || |||||||| ||||||||||||||||||||||||| |||||| Sbjct: 564 tttggagaagcttgcaactgaggagctctgcaagcactacaccaaggactttggcattga 623 Query: 496 gtgccgtattggccgttttcacaacatttatggtccctttggaacatggaaaggcggtcg 555 ||||||| ||||||| || |||||||| ||||| |||||||||||||||||||| || || Sbjct: 624 gtgccgtgttggccgcttccacaacatatatggcccctttggaacatggaaaggtggccg 683 Query: 556 cgagaaggcaccagctgccttctgtagaaaggctcag 592 ||||||||||||||||| ||||| || ||||||||| Sbjct: 684 tgagaaggcaccagctgcattctgcaggaaggctcag 720
>dbj|AK104822.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-B04, full insert sequence Length = 1587 Score = 708 bits (357), Expect = 0.0 Identities = 522/577 (90%) Strand = Plus / Plus Query: 16 agctggtggtttcattggatcccatattgctcgccgcctgaagagtgaggggcactacat 75 |||||||||||||||||||||||| ||||||||||| |||||||| |||||||| ||||| Sbjct: 229 agctggtggtttcattggatcccacattgctcgccgtctgaagagcgaggggcattacat 288 Query: 76 cattgcctctgactggaagaagaacgagcatatgaccgaggacatgttctgccatgagtt 135 ||| ||||| |||||||||||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 289 catcgcctccgactggaagaagaatgagcacatgactgaggacatgttctgccatgagtt 348 Query: 136 ccaccttgctgacctcagggtcatggacaactgccttaaggtcaccaccaacgtcgacca 195 |||||||| |||||| |||||||||||||||||||| |||||||||| | ||||||||| Sbjct: 349 ccaccttgttgaccttagggtcatggacaactgcctcaaggtcaccaacggcgtcgacca 408 Query: 196 tgtcttcaatcttgctgctgatatgggaggcatggggttcattcagtccaaccactctgt 255 ||| ||||| ||||| ||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 409 tgtgttcaaccttgccgctgatatgggtggtatggggttcattcagtccaaccactctgt 468 Query: 256 tatcatgtacaataacaccatgatcagtttcaacatgcttgaggccgggcgtatcaacgg 315 ||||||||||| |||||||||||||||||||||||||| ||||| | |||||||| || Sbjct: 469 gatcatgtacaacaacaccatgatcagtttcaacatgctcgaggctgcacgtatcaatgg 528 Query: 316 tgtgaagaggttcttctatgcctcgagcgcatgcatctaccctgaattcaaacagcttga 375 |||||||||||||||||||||||| || |||||||| |||||||||||||| |||||||| Sbjct: 529 tgtgaagaggttcttctatgcctcaagtgcatgcatttaccctgaattcaagcagcttga 588 Query: 376 gacaaatgtgagcttgaaggaagctgatgcctggcctgctgagccacaagatgcctatgg 435 || || || ||| |||||||| |||||||||||||||||||||| |||||||||||||| Sbjct: 589 aactaacgttagcctgaaggaatctgatgcctggcctgctgagcctcaagatgcctatgg 648 Query: 436 cttggagaagctcgcgaccgaggagctgtgcaagcactacaccaaggactttgacattga 495 ||||||||||| || || |||||||| ||||||||||||||||||||||||| |||||| Sbjct: 649 tttggagaagcttgcaactgaggagctctgcaagcactacaccaaggactttggcattga 708 Query: 496 gtgccgtattggccgttttcacaacatttatggtccctttggaacatggaaaggcggtcg 555 ||||||| ||||||| || |||||||| ||||| |||||||||||||||||||| || || Sbjct: 709 gtgccgtgttggccgcttccacaacatatatggcccctttggaacatggaaaggtggccg 768 Query: 556 cgagaaggcaccagctgccttctgtagaaaggctcag 592 ||||||||||||||||| ||||| || ||||||||| Sbjct: 769 tgagaaggcaccagctgcattctgcaggaaggctcag 805
>dbj|AK069385.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012D14, full insert sequence Length = 1592 Score = 700 bits (353), Expect = 0.0 Identities = 521/577 (90%) Strand = Plus / Plus Query: 16 agctggtggtttcattggatcccatattgctcgccgcctgaagagtgaggggcactacat 75 |||||||||||||||||||||||| ||||||||||| |||||||| |||||||| ||||| Sbjct: 234 agctggtggtttcattggatcccacattgctcgccgtctgaagagcgaggggcattacat 293 Query: 76 cattgcctctgactggaagaagaacgagcatatgaccgaggacatgttctgccatgagtt 135 ||| ||||| |||||||||||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 294 catcgcctccgactggaagaagaatgagcacatgactgaggacatgttctgccatgagtt 353 Query: 136 ccaccttgctgacctcagggtcatggacaactgccttaaggtcaccaccaacgtcgacca 195 |||||||| |||||| |||||||||||||||||||| |||||||||| | ||||||||| Sbjct: 354 ccaccttgttgaccttagggtcatggacaactgcctcaaggtcaccaacggcgtcgacca 413 Query: 196 tgtcttcaatcttgctgctgatatgggaggcatggggttcattcagtccaaccactctgt 255 ||| ||||| ||||| ||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 414 tgtgttcaaccttgccgctgatatgggtggtatggggttcattcagtccaaccactctgt 473 Query: 256 tatcatgtacaataacaccatgatcagtttcaacatgcttgaggccgggcgtatcaacgg 315 ||||||||||| |||||||||||||||||||||||||| ||||| | |||||||| || Sbjct: 474 gatcatgtacaacaacaccatgatcagtttcaacatgctcgaggctgcacgtatcaatgg 533 Query: 316 tgtgaagaggttcttctatgcctcgagcgcatgcatctaccctgaattcaaacagcttga 375 |||||||||||||||||||||||| || |||||||| |||||||||||||| |||||||| Sbjct: 534 tgtgaagaggttcttctatgcctcaagtgcatgcatttaccctgaattcaagcagcttga 593 Query: 376 gacaaatgtgagcttgaaggaagctgatgcctggcctgctgagccacaagatgcctatgg 435 || | || ||| |||||||| |||||||||||||||||||||| |||||||||||||| Sbjct: 594 aactgacgttagcctgaaggaatctgatgcctggcctgctgagcctcaagatgcctatgg 653 Query: 436 cttggagaagctcgcgaccgaggagctgtgcaagcactacaccaaggactttgacattga 495 ||||||||||| || || |||||||| ||||||||||||||||||||||||| |||||| Sbjct: 654 tttggagaagcttgcaactgaggagctctgcaagcactacaccaaggactttggcattga 713 Query: 496 gtgccgtattggccgttttcacaacatttatggtccctttggaacatggaaaggcggtcg 555 ||||||| ||||||| || |||||||| ||||| |||||||||||||||||||| || || Sbjct: 714 gtgccgtgttggccgcttccacaacatatatggcccctttggaacatggaaaggtggccg 773 Query: 556 cgagaaggcaccagctgccttctgtagaaaggctcag 592 ||||||||||||||||| ||||| || ||||||||| Sbjct: 774 tgagaaggcaccagctgcattctgcaggaaggctcag 810
>gb|BT016578.1| Zea mays clone Contig411 mRNA sequence Length = 1538 Score = 698 bits (352), Expect = 0.0 Identities = 520/576 (90%) Strand = Plus / Plus Query: 17 gctggtggtttcattggatcccatattgctcgccgcctgaagagtgaggggcactacatc 76 ||||||||||||||||||||||| ||||||||||| ||||||| ||||| || |||||| Sbjct: 226 gctggtggtttcattggatcccacattgctcgccgtctgaagaacgagggccattacatc 285 Query: 77 attgcctctgactggaagaagaacgagcatatgaccgaggacatgttctgccatgagttc 136 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 286 attgcctctgactggaagaagaacgagcacatgaccgaggacatgttctgccatgagttc 345 Query: 137 caccttgctgacctcagggtcatggacaactgccttaaggtcaccaccaacgtcgaccat 196 ||||| | ||| |||||||||||||||||||| || ||||||||| ||||||||| Sbjct: 346 cacctcgttgatctcagggtcatggacaactgtctcaaggtcacccatggtgtcgaccat 405 Query: 197 gtcttcaatcttgctgctgatatgggaggcatggggttcattcagtccaaccactctgtt 256 ||||||||||||||||| |||||||| |||||||||||||| ||||| || |||||||| Sbjct: 406 gtcttcaatcttgctgcagatatgggtggcatggggttcatccagtcaaatcactctgtg 465 Query: 257 atcatgtacaataacaccatgatcagtttcaacatgcttgaggccgggcgtatcaacggt 316 ||||||||||| ||||||||||||||||| |||||||| ||||| | |||||||| ||| Sbjct: 466 atcatgtacaacaacaccatgatcagttttaacatgctggaggctgcacgtatcaatggt 525 Query: 317 gtgaagaggttcttctatgcctcgagcgcatgcatctaccctgaattcaaacagcttgag 376 |||||||||||||||||||||||||| |||||||| |||||||| ||||| |||||||| Sbjct: 526 gtgaagaggttcttctatgcctcgagtgcatgcatttaccctgagttcaagcagcttgac 585 Query: 377 acaaatgtgagcttgaaggaagctgatgcctggcctgctgagccacaagatgcctatggc 436 ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| Sbjct: 586 acaaatgtgagcttgaaggaatctgatgcctggcctgctgagcctcaagatgcctatggc 645 Query: 437 ttggagaagctcgcgaccgaggagctgtgcaagcactacaccaaggactttgacattgag 496 ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 646 ttggagaagcttgcaaccgaggagctgtgcaagcactacaccaaggactttggcatcgag 705 Query: 497 tgccgtattggccgttttcacaacatttatggtccctttggaacatggaaaggcggtcgc 556 ||||| | ||||| || |||||||| || || || || |||||||||||||| || ||| Sbjct: 706 tgccgcgtcggccgcttccacaacatctacggccctttcggaacatggaaaggtggccgc 765 Query: 557 gagaaggcaccagctgccttctgtagaaaggctcag 592 ||||||||||| ||||||||||| |||||||||||| Sbjct: 766 gagaaggcaccggctgccttctgcagaaaggctcag 801
>gb|AY104279.1| Zea mays PCO103545 mRNA sequence Length = 1547 Score = 698 bits (352), Expect = 0.0 Identities = 520/576 (90%) Strand = Plus / Plus Query: 17 gctggtggtttcattggatcccatattgctcgccgcctgaagagtgaggggcactacatc 76 ||||||||||||||||||||||| ||||||||||| ||||||| ||||| || |||||| Sbjct: 228 gctggtggtttcattggatcccacattgctcgccgtctgaagaacgagggccattacatc 287 Query: 77 attgcctctgactggaagaagaacgagcatatgaccgaggacatgttctgccatgagttc 136 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 288 attgcctctgactggaagaagaacgagcacatgaccgaggacatgttctgccatgagttc 347 Query: 137 caccttgctgacctcagggtcatggacaactgccttaaggtcaccaccaacgtcgaccat 196 ||||| | ||| |||||||||||||||||||| || ||||||||| ||||||||| Sbjct: 348 cacctcgttgatctcagggtcatggacaactgtctcaaggtcacccatggtgtcgaccat 407 Query: 197 gtcttcaatcttgctgctgatatgggaggcatggggttcattcagtccaaccactctgtt 256 ||||||||||||||||| |||||||| |||||||||||||| ||||| || |||||||| Sbjct: 408 gtcttcaatcttgctgcagatatgggtggcatggggttcatccagtcaaatcactctgtg 467 Query: 257 atcatgtacaataacaccatgatcagtttcaacatgcttgaggccgggcgtatcaacggt 316 ||||||||||| ||||||||||||||||| |||||||| ||||| | |||||||| ||| Sbjct: 468 atcatgtacaacaacaccatgatcagttttaacatgctggaggctgcacgtatcaatggt 527 Query: 317 gtgaagaggttcttctatgcctcgagcgcatgcatctaccctgaattcaaacagcttgag 376 |||||||||||||||||||||||||| |||||||| |||||||| ||||| |||||||| Sbjct: 528 gtgaagaggttcttctatgcctcgagtgcatgcatttaccctgagttcaagcagcttgac 587 Query: 377 acaaatgtgagcttgaaggaagctgatgcctggcctgctgagccacaagatgcctatggc 436 ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| Sbjct: 588 acaaatgtgagcttgaaggaatctgatgcctggcctgctgagcctcaagatgcctatggc 647 Query: 437 ttggagaagctcgcgaccgaggagctgtgcaagcactacaccaaggactttgacattgag 496 ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 648 ttggagaagcttgcaaccgaggagctgtgcaagcactacaccaaggactttggcatcgag 707 Query: 497 tgccgtattggccgttttcacaacatttatggtccctttggaacatggaaaggcggtcgc 556 ||||| | ||||| || |||||||| || || || || |||||||||||||| || ||| Sbjct: 708 tgccgcgtcggccgcttccacaacatctacggccctttcggaacatggaaaggtggccgc 767 Query: 557 gagaaggcaccagctgccttctgtagaaaggctcag 592 ||||||||||| ||||||||||| |||||||||||| Sbjct: 768 gagaaggcaccggctgccttctgcagaaaggctcag 803
>gb|AC016780.6| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar Nipponbare Clone OSJNBa0061K21 From Chromosome 10, complete sequence Length = 112721 Score = 402 bits (203), Expect = e-109 Identities = 284/311 (91%) Strand = Plus / Plus Query: 16 agctggtggtttcattggatcccatattgctcgccgcctgaagagtgaggggcactacat 75 |||||||||||||||||||||||| ||||||||||| |||||||| |||||||| ||||| Sbjct: 66945 agctggtggtttcattggatcccacattgctcgccgtctgaagagcgaggggcattacat 67004 Query: 76 cattgcctctgactggaagaagaacgagcatatgaccgaggacatgttctgccatgagtt 135 ||| ||||| |||||||||||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 67005 catcgcctccgactggaagaagaatgagcacatgactgaggacatgttctgccatgagtt 67064 Query: 136 ccaccttgctgacctcagggtcatggacaactgccttaaggtcaccaccaacgtcgacca 195 |||||||| |||||| |||||||||||||||||||| |||||||||| | ||||||||| Sbjct: 67065 ccaccttgttgaccttagggtcatggacaactgcctcaaggtcaccaacggcgtcgacca 67124 Query: 196 tgtcttcaatcttgctgctgatatgggaggcatggggttcattcagtccaaccactctgt 255 ||| ||||| ||||| ||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 67125 tgtgttcaaccttgccgctgatatgggtggtatggggttcattcagtccaaccactctgt 67184 Query: 256 tatcatgtacaataacaccatgatcagtttcaacatgcttgaggccgggcgtatcaacgg 315 ||||||||||| |||||||||||||||||||||||||| ||||| | |||||||| || Sbjct: 67185 gatcatgtacaacaacaccatgatcagtttcaacatgctcgaggctgcacgtatcaatgg 67244 Query: 316 tgtgaagaggt 326 ||||||||||| Sbjct: 67245 tgtgaagaggt 67255 Score = 168 bits (85), Expect = 1e-38 Identities = 121/133 (90%) Strand = Plus / Plus Query: 417 agccacaagatgcctatggcttggagaagctcgcgaccgaggagctgtgcaagcactaca 476 |||| |||||||||||||| ||||||||||| || || |||||||| ||||||||||||| Sbjct: 67540 agcctcaagatgcctatggtttggagaagcttgcaactgaggagctctgcaagcactaca 67599 Query: 477 ccaaggactttgacattgagtgccgtattggccgttttcacaacatttatggtccctttg 536 |||||||||||| ||||||||||||| ||||||| || |||||||| ||||| ||||||| Sbjct: 67600 ccaaggactttggcattgagtgccgtgttggccgcttccacaacatatatggcccctttg 67659 Query: 537 gaacatggaaagg 549 ||||||||||||| Sbjct: 67660 gaacatggaaagg 67672 Score = 111 bits (56), Expect = 3e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 323 aggttcttctatgcctcgagcgcatgcatctaccctgaattcaaacagcttgagacaaat 382 ||||||||||||||||| || |||||||| |||||||||||||| |||||||| || || Sbjct: 67359 aggttcttctatgcctcaagtgcatgcatttaccctgaattcaagcagcttgaaactaac 67418 Query: 383 gtgagcttgaaggaagctgatgcctggcctgctgag 418 || ||| |||||||| |||||||||||||||||||| Sbjct: 67419 gttagcctgaaggaatctgatgcctggcctgctgag 67454 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Plus Query: 557 gagaaggcaccagctgccttctgtagaaaggctcag 592 ||||||||||||||||| ||||| || ||||||||| Sbjct: 67759 gagaaggcaccagctgcattctgcaggaaggctcag 67794
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 402 bits (203), Expect = e-109 Identities = 284/311 (91%) Strand = Plus / Plus Query: 16 agctggtggtttcattggatcccatattgctcgccgcctgaagagtgaggggcactacat 75 |||||||||||||||||||||||| ||||||||||| |||||||| |||||||| ||||| Sbjct: 14127307 agctggtggtttcattggatcccacattgctcgccgtctgaagagcgaggggcattacat 14127366 Query: 76 cattgcctctgactggaagaagaacgagcatatgaccgaggacatgttctgccatgagtt 135 ||| ||||| |||||||||||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 14127367 catcgcctccgactggaagaagaatgagcacatgactgaggacatgttctgccatgagtt 14127426 Query: 136 ccaccttgctgacctcagggtcatggacaactgccttaaggtcaccaccaacgtcgacca 195 |||||||| |||||| |||||||||||||||||||| |||||||||| | ||||||||| Sbjct: 14127427 ccaccttgttgaccttagggtcatggacaactgcctcaaggtcaccaacggcgtcgacca 14127486 Query: 196 tgtcttcaatcttgctgctgatatgggaggcatggggttcattcagtccaaccactctgt 255 ||| ||||| ||||| ||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 14127487 tgtgttcaaccttgccgctgatatgggtggtatggggttcattcagtccaaccactctgt 14127546 Query: 256 tatcatgtacaataacaccatgatcagtttcaacatgcttgaggccgggcgtatcaacgg 315 ||||||||||| |||||||||||||||||||||||||| ||||| | |||||||| || Sbjct: 14127547 gatcatgtacaacaacaccatgatcagtttcaacatgctcgaggctgcacgtatcaatgg 14127606 Query: 316 tgtgaagaggt 326 ||||||||||| Sbjct: 14127607 tgtgaagaggt 14127617 Score = 168 bits (85), Expect = 1e-38 Identities = 121/133 (90%) Strand = Plus / Plus Query: 417 agccacaagatgcctatggcttggagaagctcgcgaccgaggagctgtgcaagcactaca 476 |||| |||||||||||||| ||||||||||| || || |||||||| ||||||||||||| Sbjct: 14127902 agcctcaagatgcctatggtttggagaagcttgcaactgaggagctctgcaagcactaca 14127961 Query: 477 ccaaggactttgacattgagtgccgtattggccgttttcacaacatttatggtccctttg 536 |||||||||||| ||||||||||||| ||||||| || |||||||| ||||| ||||||| Sbjct: 14127962 ccaaggactttggcattgagtgccgtgttggccgcttccacaacatatatggcccctttg 14128021 Query: 537 gaacatggaaagg 549 ||||||||||||| Sbjct: 14128022 gaacatggaaagg 14128034 Score = 111 bits (56), Expect = 3e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 323 aggttcttctatgcctcgagcgcatgcatctaccctgaattcaaacagcttgagacaaat 382 ||||||||||||||||| || |||||||| |||||||||||||| |||||||| || || Sbjct: 14127721 aggttcttctatgcctcaagtgcatgcatttaccctgaattcaagcagcttgaaactaac 14127780 Query: 383 gtgagcttgaaggaagctgatgcctggcctgctgag 418 || ||| |||||||| |||||||||||||||||||| Sbjct: 14127781 gttagcctgaaggaatctgatgcctggcctgctgag 14127816 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Plus Query: 557 gagaaggcaccagctgccttctgtagaaaggctcag 592 ||||||||||||||||| ||||| || ||||||||| Sbjct: 14128121 gagaaggcaccagctgcattctgcaggaaggctcag 14128156
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence Length = 144651 Score = 402 bits (203), Expect = e-109 Identities = 284/311 (91%) Strand = Plus / Plus Query: 16 agctggtggtttcattggatcccatattgctcgccgcctgaagagtgaggggcactacat 75 |||||||||||||||||||||||| ||||||||||| |||||||| |||||||| ||||| Sbjct: 143436 agctggtggtttcattggatcccacattgctcgccgtctgaagagcgaggggcattacat 143495 Query: 76 cattgcctctgactggaagaagaacgagcatatgaccgaggacatgttctgccatgagtt 135 ||| ||||| |||||||||||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 143496 catcgcctccgactggaagaagaatgagcacatgactgaggacatgttctgccatgagtt 143555 Query: 136 ccaccttgctgacctcagggtcatggacaactgccttaaggtcaccaccaacgtcgacca 195 |||||||| |||||| |||||||||||||||||||| |||||||||| | ||||||||| Sbjct: 143556 ccaccttgttgaccttagggtcatggacaactgcctcaaggtcaccaacggcgtcgacca 143615 Query: 196 tgtcttcaatcttgctgctgatatgggaggcatggggttcattcagtccaaccactctgt 255 ||| ||||| ||||| ||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 143616 tgtgttcaaccttgccgctgatatgggtggtatggggttcattcagtccaaccactctgt 143675 Query: 256 tatcatgtacaataacaccatgatcagtttcaacatgcttgaggccgggcgtatcaacgg 315 ||||||||||| |||||||||||||||||||||||||| ||||| | |||||||| || Sbjct: 143676 gatcatgtacaacaacaccatgatcagtttcaacatgctcgaggctgcacgtatcaatgg 143735 Query: 316 tgtgaagaggt 326 ||||||||||| Sbjct: 143736 tgtgaagaggt 143746 Score = 168 bits (85), Expect = 1e-38 Identities = 121/133 (90%) Strand = Plus / Plus Query: 417 agccacaagatgcctatggcttggagaagctcgcgaccgaggagctgtgcaagcactaca 476 |||| |||||||||||||| ||||||||||| || || |||||||| ||||||||||||| Sbjct: 144031 agcctcaagatgcctatggtttggagaagcttgcaactgaggagctctgcaagcactaca 144090 Query: 477 ccaaggactttgacattgagtgccgtattggccgttttcacaacatttatggtccctttg 536 |||||||||||| ||||||||||||| ||||||| || |||||||| ||||| ||||||| Sbjct: 144091 ccaaggactttggcattgagtgccgtgttggccgcttccacaacatatatggcccctttg 144150 Query: 537 gaacatggaaagg 549 ||||||||||||| Sbjct: 144151 gaacatggaaagg 144163 Score = 111 bits (56), Expect = 3e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 323 aggttcttctatgcctcgagcgcatgcatctaccctgaattcaaacagcttgagacaaat 382 ||||||||||||||||| || |||||||| |||||||||||||| |||||||| || || Sbjct: 143850 aggttcttctatgcctcaagtgcatgcatttaccctgaattcaagcagcttgaaactaac 143909 Query: 383 gtgagcttgaaggaagctgatgcctggcctgctgag 418 || ||| |||||||| |||||||||||||||||||| Sbjct: 143910 gttagcctgaaggaatctgatgcctggcctgctgag 143945 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Plus Query: 557 gagaaggcaccagctgccttctgtagaaaggctcag 592 ||||||||||||||||| ||||| || ||||||||| Sbjct: 144250 gagaaggcaccagctgcattctgcaggaaggctcag 144285
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 402 bits (203), Expect = e-109 Identities = 284/311 (91%) Strand = Plus / Plus Query: 16 agctggtggtttcattggatcccatattgctcgccgcctgaagagtgaggggcactacat 75 |||||||||||||||||||||||| ||||||||||| |||||||| |||||||| ||||| Sbjct: 14135549 agctggtggtttcattggatcccacattgctcgccgtctgaagagcgaggggcattacat 14135608 Query: 76 cattgcctctgactggaagaagaacgagcatatgaccgaggacatgttctgccatgagtt 135 ||| ||||| |||||||||||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 14135609 catcgcctccgactggaagaagaatgagcacatgactgaggacatgttctgccatgagtt 14135668 Query: 136 ccaccttgctgacctcagggtcatggacaactgccttaaggtcaccaccaacgtcgacca 195 |||||||| |||||| |||||||||||||||||||| |||||||||| | ||||||||| Sbjct: 14135669 ccaccttgttgaccttagggtcatggacaactgcctcaaggtcaccaacggcgtcgacca 14135728 Query: 196 tgtcttcaatcttgctgctgatatgggaggcatggggttcattcagtccaaccactctgt 255 ||| ||||| ||||| ||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 14135729 tgtgttcaaccttgccgctgatatgggtggtatggggttcattcagtccaaccactctgt 14135788 Query: 256 tatcatgtacaataacaccatgatcagtttcaacatgcttgaggccgggcgtatcaacgg 315 ||||||||||| |||||||||||||||||||||||||| ||||| | |||||||| || Sbjct: 14135789 gatcatgtacaacaacaccatgatcagtttcaacatgctcgaggctgcacgtatcaatgg 14135848 Query: 316 tgtgaagaggt 326 ||||||||||| Sbjct: 14135849 tgtgaagaggt 14135859 Score = 168 bits (85), Expect = 1e-38 Identities = 121/133 (90%) Strand = Plus / Plus Query: 417 agccacaagatgcctatggcttggagaagctcgcgaccgaggagctgtgcaagcactaca 476 |||| |||||||||||||| ||||||||||| || || |||||||| ||||||||||||| Sbjct: 14136144 agcctcaagatgcctatggtttggagaagcttgcaactgaggagctctgcaagcactaca 14136203 Query: 477 ccaaggactttgacattgagtgccgtattggccgttttcacaacatttatggtccctttg 536 |||||||||||| ||||||||||||| ||||||| || |||||||| ||||| ||||||| Sbjct: 14136204 ccaaggactttggcattgagtgccgtgttggccgcttccacaacatatatggcccctttg 14136263 Query: 537 gaacatggaaagg 549 ||||||||||||| Sbjct: 14136264 gaacatggaaagg 14136276 Score = 111 bits (56), Expect = 3e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 323 aggttcttctatgcctcgagcgcatgcatctaccctgaattcaaacagcttgagacaaat 382 ||||||||||||||||| || |||||||| |||||||||||||| |||||||| || || Sbjct: 14135963 aggttcttctatgcctcaagtgcatgcatttaccctgaattcaagcagcttgaaactaac 14136022 Query: 383 gtgagcttgaaggaagctgatgcctggcctgctgag 418 || ||| |||||||| |||||||||||||||||||| Sbjct: 14136023 gttagcctgaaggaatctgatgcctggcctgctgag 14136058 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Plus Query: 557 gagaaggcaccagctgccttctgtagaaaggctcag 592 ||||||||||||||||| ||||| || ||||||||| Sbjct: 14136363 gagaaggcaccagctgcattctgcaggaaggctcag 14136398
>dbj|AK102348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091C16, full insert sequence Length = 1533 Score = 367 bits (185), Expect = 3e-98 Identities = 452/541 (83%) Strand = Plus / Plus Query: 50 cgcctgaagagtgaggggcactacatcattgcctctgactggaagaagaacgagcatatg 109 ||||| ||||| ||||| |||||||||||||| |||||||||||||| || ||||| ||| Sbjct: 196 cgcctcaagagcgagggccactacatcattgcttctgactggaagaaaaatgagcacatg 255 Query: 110 accgaggacatgttctgccatgagttccaccttgctgacctcagggtcatggacaactgc 169 || ||||| |||||||||||||||||||| |||| ||| | ||||| |||||||||||| Sbjct: 256 actgaggatatgttctgccatgagttccatcttgttgatttgagggtgatggacaactgc 315 Query: 170 cttaaggtcaccaccaacgtcgaccatgtcttcaatcttgctgctgatatgggaggcatg 229 || ||||| |||||| || |||||||| ||||| ||||| |||||||||||||| ||| Sbjct: 316 ctcaaggtgaccaccggggttgaccatgttttcaaccttgccgctgatatgggagggatg 375 Query: 230 gggttcattcagtccaaccactctgttatcatgtacaataacaccatgatcagtttcaac 289 || |||||||| ||||| |||||||||||||||||||| |||||||||||||| || ||| Sbjct: 376 ggattcattcaatccaatcactctgttatcatgtacaacaacaccatgatcagctttaac 435 Query: 290 atgcttgaggccgggcgtatcaacggtgtgaagaggttcttctatgcctcgagcgcatgc 349 ||||||||||||| | || || ||||| || |||||||| ||||| || || || || Sbjct: 436 atgcttgaggccgctaggattaatggtgtcaaaaggttcttttatgcttcaagtgcttgt 495 Query: 350 atctaccctgaattcaaacagcttgagacaaatgtgagcttgaaggaagctgatgcctgg 409 |||||||||||||| || ||||| || || || ||||||||| | | ||||| ||| Sbjct: 496 atctaccctgaatttaagcagctggacactgtagttagcttgaagtagtcagatgcttgg 555 Query: 410 cctgctgagccacaagatgcctatggcttggagaagctcgcgaccgaggagctgtgcaag 469 ||||| ||||| |||||||||||||||||||| || || || || ||||| ||||||||| Sbjct: 556 cctgcagagcctcaagatgcctatggcttggaaaaacttgctactgaggaactgtgcaag 615 Query: 470 cactacaccaaggactttgacattgagtgccgtattggccgttttcacaacatttatggt 529 || ||||| ||||| |||| |||||| || || ||||||| ||||| || || |||||| Sbjct: 616 cattacacaaaggattttggcattgaatgtcgggttggccgctttcataatatctatggt 675 Query: 530 ccctttggaacatggaaaggcggtcgcgagaaggcaccagctgccttctgtagaaaggct 589 ||||||||||||||||| || || | |||||||| || ||||| ||||| ||||| ||| Sbjct: 676 ccctttggaacatggaagggtggaagggagaaggcgcctgctgctttctgcagaaaagct 735 Query: 590 c 590 | Sbjct: 736 c 736
>gb|BT013590.1| Lycopersicon esculentum clone 132353F, mRNA sequence Length = 1880 Score = 303 bits (153), Expect = 3e-79 Identities = 438/533 (82%) Strand = Plus / Plus Query: 53 ctgaagagtgaggggcactacatcattgcctctgactggaagaagaacgagcatatgacc 112 ||||||| ||||||||| ||||| ||||| || |||||||||||||| ||||| ||| | Sbjct: 328 ctgaagactgaggggcattacattattgcttccgactggaagaagaatgagcacatgtct 387 Query: 113 gaggacatgttctgccatgagttccaccttgctgacctcagggtcatggacaactgcctt 172 ||||||||||| || ||||||||||| |||| ||| |||||||| ||||| ||||| | Sbjct: 388 gaggacatgttttgtcatgagttccatcttgttgatctcagggtgatggataactgtttg 447 Query: 173 aaggtcaccaccaacgtcgaccatgtcttcaatcttgctgctgatatgggaggcatgggg 232 || ||||| | || || ||||| |||||||| ||||||||||||||||| ||||| Sbjct: 448 aaagtcacaaaaggagttgatcatgtgttcaatctcgctgctgatatgggaggtatgggc 507 Query: 233 ttcattcagtccaaccactctgttatcatgtacaataacaccatgatcagtttcaacatg 292 ||||||||||| |||||||| || |||||||| || ||||| |||||||| || |||||| Sbjct: 508 ttcattcagtcgaaccactcggtgatcatgtataacaacactatgatcagctttaacatg 567 Query: 293 cttgaggccgggcgtatcaacggtgtgaagaggttcttctatgcctcgagcgcatgcatc 352 | ||||| | || || |||| ||||||||||| ||||| || || || |||||| Sbjct: 568 atggaggcttcaagaataaatagtgttaagaggttcttttatgcatccagtgcttgcatc 627 Query: 353 taccctgaattcaaacagcttgagacaaatgtgagcttgaaggaagctgatgcctggcct 412 ||||||||||| || || | || || || |||||||| ||||| ||||||| |||||| Sbjct: 628 taccctgaatttaagcaattggaaactaacgtgagcttaaaggagtctgatgcttggcct 687 Query: 413 gctgagccacaagatgcctatggcttggagaagctcgcgaccgaggagctgtgcaagcac 472 || ||||| |||||||| |||||||| || ||||| || || |||||| |||| |||||| Sbjct: 688 gcagagcctcaagatgcttatggcttagaaaagctagcaacagaggagttgtgtaagcac 747 Query: 473 tacaccaaggactttgacattgagtgccgtattggccgttttcacaacatttatggtccc 532 |||| ||||||||||| ||||| || || ||||||||||| || ||||||||||| || Sbjct: 748 tacaacaaggactttggaattgaatgtcgcattggccgtttccataacatttatggccca 807 Query: 533 tttggaacatggaaaggcggtcgcgagaaggcaccagctgccttctgtagaaa 585 |||||||||||||||||||| || ||||| |||||||| || || |||||||| Sbjct: 808 tttggaacatggaaaggcggacgtgagaaagcaccagcagctttttgtagaaa 860
>gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1356F10, complete sequence Length = 170681 Score = 256 bits (129), Expect = 7e-65 Identities = 222/253 (87%) Strand = Plus / Minus Query: 50 cgcctgaagagtgaggggcactacatcattgcctctgactggaagaagaacgagcatatg 109 ||||| ||||| ||||| |||||||||||||| |||||||||||||| || ||||| ||| Sbjct: 133051 cgcctcaagagcgagggccactacatcattgcttctgactggaagaaaaatgagcacatg 132992 Query: 110 accgaggacatgttctgccatgagttccaccttgctgacctcagggtcatggacaactgc 169 || ||||| |||||||||||||||||||| |||| ||| | ||||| |||||||||||| Sbjct: 132991 actgaggatatgttctgccatgagttccatcttgttgatttgagggtgatggacaactgc 132932 Query: 170 cttaaggtcaccaccaacgtcgaccatgtcttcaatcttgctgctgatatgggaggcatg 229 || ||||| |||||| || |||||||| ||||| ||||| |||||||||||||| ||| Sbjct: 132931 ctcaaggtgaccaccggggttgaccatgttttcaaccttgccgctgatatgggagggatg 132872 Query: 230 gggttcattcagtccaaccactctgttatcatgtacaataacaccatgatcagtttcaac 289 || |||||||| ||||| |||||||||||||||||||| |||||||||||||| || ||| Sbjct: 132871 ggattcattcaatccaatcactctgttatcatgtacaacaacaccatgatcagctttaac 132812 Query: 290 atgcttgaggccg 302 ||||||||||||| Sbjct: 132811 atgcttgaggccg 132799 Score = 107 bits (54), Expect = 4e-20 Identities = 111/130 (85%) Strand = Plus / Minus Query: 417 agccacaagatgcctatggcttggagaagctcgcgaccgaggagctgtgcaagcactaca 476 |||| |||||||||||||||||||| || || || || ||||| ||||||||||| |||| Sbjct: 131425 agcctcaagatgcctatggcttggaaaaacttgctactgaggaactgtgcaagcattaca 131366 Query: 477 ccaaggactttgacattgagtgccgtattggccgttttcacaacatttatggtccctttg 536 | ||||| |||| |||||| || || ||||||| ||||| || || ||||||||||||| Sbjct: 131365 caaaggattttggcattgaatgtcgggttggccgctttcataatatctatggtccctttg 131306 Query: 537 gaacatggaa 546 |||||||||| Sbjct: 131305 gaacatggaa 131296
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 256 bits (129), Expect = 7e-65 Identities = 222/253 (87%) Strand = Plus / Minus Query: 50 cgcctgaagagtgaggggcactacatcattgcctctgactggaagaagaacgagcatatg 109 ||||| ||||| ||||| |||||||||||||| |||||||||||||| || ||||| ||| Sbjct: 21609532 cgcctcaagagcgagggccactacatcattgcttctgactggaagaaaaatgagcacatg 21609473 Query: 110 accgaggacatgttctgccatgagttccaccttgctgacctcagggtcatggacaactgc 169 || ||||| |||||||||||||||||||| |||| ||| | ||||| |||||||||||| Sbjct: 21609472 actgaggatatgttctgccatgagttccatcttgttgatttgagggtgatggacaactgc 21609413 Query: 170 cttaaggtcaccaccaacgtcgaccatgtcttcaatcttgctgctgatatgggaggcatg 229 || ||||| |||||| || |||||||| ||||| ||||| |||||||||||||| ||| Sbjct: 21609412 ctcaaggtgaccaccggggttgaccatgttttcaaccttgccgctgatatgggagggatg 21609353 Query: 230 gggttcattcagtccaaccactctgttatcatgtacaataacaccatgatcagtttcaac 289 || |||||||| ||||| |||||||||||||||||||| |||||||||||||| || ||| Sbjct: 21609352 ggattcattcaatccaatcactctgttatcatgtacaacaacaccatgatcagctttaac 21609293 Query: 290 atgcttgaggccg 302 ||||||||||||| Sbjct: 21609292 atgcttgaggccg 21609280 Score = 107 bits (54), Expect = 4e-20 Identities = 111/130 (85%) Strand = Plus / Minus Query: 417 agccacaagatgcctatggcttggagaagctcgcgaccgaggagctgtgcaagcactaca 476 |||| |||||||||||||||||||| || || || || ||||| ||||||||||| |||| Sbjct: 21607906 agcctcaagatgcctatggcttggaaaaacttgctactgaggaactgtgcaagcattaca 21607847 Query: 477 ccaaggactttgacattgagtgccgtattggccgttttcacaacatttatggtccctttg 536 | ||||| |||| |||||| || || ||||||| ||||| || || ||||||||||||| Sbjct: 21607846 caaaggattttggcattgaatgtcgggttggccgctttcataatatctatggtccctttg 21607787 Query: 537 gaacatggaa 546 |||||||||| Sbjct: 21607786 gaacatggaa 21607777
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 256 bits (129), Expect = 7e-65 Identities = 222/253 (87%) Strand = Plus / Minus Query: 50 cgcctgaagagtgaggggcactacatcattgcctctgactggaagaagaacgagcatatg 109 ||||| ||||| ||||| |||||||||||||| |||||||||||||| || ||||| ||| Sbjct: 21919731 cgcctcaagagcgagggccactacatcattgcttctgactggaagaaaaatgagcacatg 21919672 Query: 110 accgaggacatgttctgccatgagttccaccttgctgacctcagggtcatggacaactgc 169 || ||||| |||||||||||||||||||| |||| ||| | ||||| |||||||||||| Sbjct: 21919671 actgaggatatgttctgccatgagttccatcttgttgatttgagggtgatggacaactgc 21919612 Query: 170 cttaaggtcaccaccaacgtcgaccatgtcttcaatcttgctgctgatatgggaggcatg 229 || ||||| |||||| || |||||||| ||||| ||||| |||||||||||||| ||| Sbjct: 21919611 ctcaaggtgaccaccggggttgaccatgttttcaaccttgccgctgatatgggagggatg 21919552 Query: 230 gggttcattcagtccaaccactctgttatcatgtacaataacaccatgatcagtttcaac 289 || |||||||| ||||| |||||||||||||||||||| |||||||||||||| || ||| Sbjct: 21919551 ggattcattcaatccaatcactctgttatcatgtacaacaacaccatgatcagctttaac 21919492 Query: 290 atgcttgaggccg 302 ||||||||||||| Sbjct: 21919491 atgcttgaggccg 21919479 Score = 107 bits (54), Expect = 4e-20 Identities = 111/130 (85%) Strand = Plus / Minus Query: 417 agccacaagatgcctatggcttggagaagctcgcgaccgaggagctgtgcaagcactaca 476 |||| |||||||||||||||||||| || || || || ||||| ||||||||||| |||| Sbjct: 21918105 agcctcaagatgcctatggcttggaaaaacttgctactgaggaactgtgcaagcattaca 21918046 Query: 477 ccaaggactttgacattgagtgccgtattggccgttttcacaacatttatggtccctttg 536 | ||||| |||| |||||| || || ||||||| ||||| || || ||||||||||||| Sbjct: 21918045 caaaggattttggcattgaatgtcgggttggccgctttcataatatctatggtccctttg 21917986 Query: 537 gaacatggaa 546 |||||||||| Sbjct: 21917985 gaacatggaa 21917976
>gb|DQ268848.1| Solanum tuberosum clone 155B09 NAD-dependent epimerase/dehydratase family protein-like protein mRNA, complete cds Length = 1521 Score = 256 bits (129), Expect = 7e-65 Identities = 414/509 (81%) Strand = Plus / Plus Query: 41 attgctcgccgcctgaagagtgaggggcactacatcattgcctctgactggaagaagaac 100 |||||||| || ||||||| ||||| |||||||| |||||||| || ||||||||||| Sbjct: 151 attgctcgtcgtttgaagagcgagggccactacataattgcctccgattggaagaagaat 210 Query: 101 gagcatatgaccgaggacatgttctgccatgagttccaccttgctgacctcagggtcatg 160 ||||| ||||| ||||| |||||||| |||||||| || ||||| || || ||||| ||| Sbjct: 211 gagcacatgacagaggatatgttctgtcatgagtttcatcttgcggatcttagggttatg 270 Query: 161 gacaactgccttaaggtcaccaccaacgtcgaccatgtcttcaatcttgctgctgatatg 220 || || ||| | ||||| || | || ||||||||||||||||| |||||||||||| Sbjct: 271 gataattgcttgaaggtaacaaaaggtgttgaccatgtcttcaatctcgctgctgatatg 330 Query: 221 ggaggcatggggttcattcagtccaaccactctgttatcatgtacaataacaccatgatc 280 || |||||||| |||||||||||||||||||| |||||| | || || ||||| |||||| Sbjct: 331 ggtggcatgggtttcattcagtccaaccactcggttatcttctataacaacactatgatc 390 Query: 281 agtttcaacatgcttgaggccgggcgtatcaacggtgtgaagaggttcttctatgcctcg 340 || ||||| ||| | || || | | || ||| |||| || |||||||||||||| || Sbjct: 391 agcttcaatatgatggaagctgctaggattaacagtgtcaaaaggttcttctatgcatct 450 Query: 341 agcgcatgcatctaccctgaattcaaacagcttgagacaaatgtgagcttgaaggaagct 400 || || ||||| ||||| || |||||||| || || |||||||| ||| |||| |||||| Sbjct: 451 agtgcttgcatataccccgagttcaaacaactcgaaacaaatgtcagcctgaaagaagct 510 Query: 401 gatgcctggcctgctgagccacaagatgcctatggcttggagaagctcgcgaccgaggag 460 ||||| |||||||| ||||| |||||||| || |||||||| ||||| || || || || Sbjct: 511 gatgcttggcctgcagagcctcaagatgcatacggcttggaaaagcttgccacagaagaa 570 Query: 461 ctgtgcaagcactacaccaaggactttgacattgagtgccgtattggccgttttcacaac 520 |||||||| || |||| |||||| |||| ||||| || |||||||| | || || ||| Sbjct: 571 ctgtgcaaacattacaacaaggattttggaattgaatgtcgtattggaaggttccataac 630 Query: 521 atttatggtccctttggaacatggaaagg 549 || ||||| || |||||||| |||||||| Sbjct: 631 atctatggaccttttggaacttggaaagg 659
>ref|NM_122767.2| Arabidopsis thaliana GDP-mannose 3,5-epimerase/ catalytic AT5G28840 mRNA, complete cds Length = 1611 Score = 161 bits (81), Expect = 3e-36 Identities = 311/387 (80%), Gaps = 3/387 (0%) Strand = Plus / Plus Query: 209 gctgctgatatgggaggcatggggttcattcagtccaaccactctgttatcatgtacaat 268 |||||||||||||| || ||||| || || ||| || |||||||| || ||||| ||| Sbjct: 473 gctgctgatatgggtggtatgggttttatccagagtaatcactctgtgattatgtataat 532 Query: 269 aacaccatgatcagtttcaacatgcttgaggccgggcgtatcaacggtgtgaagaggttc 328 || || ||||| |||||||| ||| ||||||| | | ||||| || | ||||||||| Sbjct: 533 aatactatgattagtttcaatatgattgaggctgctaggatcaatgggattaagaggttc 592 Query: 329 ttctatgcctcgagcgcatgcatctaccctgaattcaaacagcttgagacaa---atgtg 385 || ||||| ||||| || || ||||| || || || || ||| | ||||| | ||||| Sbjct: 593 ttttatgcttcgagtgcttgtatctatccagagtttaagcagttggagactactaatgtg 652 Query: 386 agcttgaaggaagctgatgcctggcctgctgagccacaagatgcctatggcttggagaag 445 ||||||||||| | ||||| |||||||| ||||| |||||||| ||||| ||||||||| Sbjct: 653 agcttgaaggagtcagatgcttggcctgcagagcctcaagatgcttatggtttggagaag 712 Query: 446 ctcgcgaccgaggagctgtgcaagcactacaccaaggactttgacattgagtgccgtatt 505 || || || |||||| |||| ||||| |||| ||| || |||| |||||||| || ||| Sbjct: 713 cttgctacggaggagttgtgtaagcattacaacaaagattttggtattgagtgtcgaatt 772 Query: 506 ggccgttttcacaacatttatggtccctttggaacatggaaaggcggtcgcgagaaggca 565 || | || || |||||||||||||| ||||||||||||||||| || | |||||||| Sbjct: 773 ggaaggttccataacatttatggtccttttggaacatggaaaggtggaagggagaaggct 832 Query: 566 ccagctgccttctgtagaaaggctcag 592 |||||||| |||||||| ||||||||| Sbjct: 833 ccagctgctttctgtaggaaggctcag 859 Score = 61.9 bits (31), Expect = 2e-06 Identities = 118/147 (80%) Strand = Plus / Plus Query: 16 agctggtggtttcattggatcccatattgctcgccgcctgaagagtgaggggcactacat 75 |||||| |||||||||| ||| || |||||||| || ||||| || || || ||| | Sbjct: 280 agctggaggtttcattgcatctcacattgctcgtcgtttgaagcacgaaggtcattacgt 339 Query: 76 cattgcctctgactggaagaagaacgagcatatgaccgaggacatgttctgccatgagtt 135 ||||| ||||||||||| ||||| || || ||||| || ||||||||||| ||||||| Sbjct: 340 gattgcttctgactggaaaaagaatgaacacatgactgaagacatgttctgtgatgagtt 399 Query: 136 ccaccttgctgacctcagggtcatgga 162 ||| |||| ||| || ||||| ||||| Sbjct: 400 ccatcttgttgatcttagggttatgga 426
>gb|AY116953.1| Arabidopsis thaliana AT5g28840/F7P1_20 mRNA, complete cds Length = 1134 Score = 161 bits (81), Expect = 3e-36 Identities = 311/387 (80%), Gaps = 3/387 (0%) Strand = Plus / Plus Query: 209 gctgctgatatgggaggcatggggttcattcagtccaaccactctgttatcatgtacaat 268 |||||||||||||| || ||||| || || ||| || |||||||| || ||||| ||| Sbjct: 295 gctgctgatatgggtggtatgggttttatccagagtaatcactctgtgattatgtataat 354 Query: 269 aacaccatgatcagtttcaacatgcttgaggccgggcgtatcaacggtgtgaagaggttc 328 || || ||||| |||||||| ||| ||||||| | | ||||| || | ||||||||| Sbjct: 355 aatactatgattagtttcaatatgattgaggctgctaggatcaatgggattaagaggttc 414 Query: 329 ttctatgcctcgagcgcatgcatctaccctgaattcaaacagcttgagacaa---atgtg 385 || ||||| ||||| || || ||||| || || || || ||| | ||||| | ||||| Sbjct: 415 ttttatgcttcgagtgcttgtatctatccagagtttaagcagttggagactactaatgtg 474 Query: 386 agcttgaaggaagctgatgcctggcctgctgagccacaagatgcctatggcttggagaag 445 ||||||||||| | ||||| |||||||| ||||| |||||||| ||||| ||||||||| Sbjct: 475 agcttgaaggagtcagatgcttggcctgcagagcctcaagatgcttatggtttggagaag 534 Query: 446 ctcgcgaccgaggagctgtgcaagcactacaccaaggactttgacattgagtgccgtatt 505 || || || |||||| |||| ||||| |||| ||| || |||| |||||||| || ||| Sbjct: 535 cttgctacggaggagttgtgtaagcattacaacaaagattttggtattgagtgtcgaatt 594 Query: 506 ggccgttttcacaacatttatggtccctttggaacatggaaaggcggtcgcgagaaggca 565 || | || || |||||||||||||| ||||||||||||||||| || | |||||||| Sbjct: 595 ggaaggttccataacatttatggtccttttggaacatggaaaggtggaagggagaaggct 654 Query: 566 ccagctgccttctgtagaaaggctcag 592 |||||||| |||||||| ||||||||| Sbjct: 655 ccagctgctttctgtaggaaggctcag 681 Score = 61.9 bits (31), Expect = 2e-06 Identities = 118/147 (80%) Strand = Plus / Plus Query: 16 agctggtggtttcattggatcccatattgctcgccgcctgaagagtgaggggcactacat 75 |||||| |||||||||| ||| || |||||||| || ||||| || || || ||| | Sbjct: 102 agctggaggtttcattgcatctcacattgctcgtcgtttgaagcacgaaggtcattacgt 161 Query: 76 cattgcctctgactggaagaagaacgagcatatgaccgaggacatgttctgccatgagtt 135 ||||| ||||||||||| ||||| || || ||||| || ||||||||||| ||||||| Sbjct: 162 gattgcttctgactggaaaaagaatgaacacatgactgaagacatgttctgtgatgagtt 221 Query: 136 ccaccttgctgacctcagggtcatgga 162 ||| |||| ||| || ||||| ||||| Sbjct: 222 ccatcttgttgatcttagggttatgga 248
>gb|AY057694.1| Arabidopsis thaliana AT5g28840/F7P1_20 mRNA, complete cds Length = 1404 Score = 161 bits (81), Expect = 3e-36 Identities = 311/387 (80%), Gaps = 3/387 (0%) Strand = Plus / Plus Query: 209 gctgctgatatgggaggcatggggttcattcagtccaaccactctgttatcatgtacaat 268 |||||||||||||| || ||||| || || ||| || |||||||| || ||||| ||| Sbjct: 358 gctgctgatatgggtggtatgggttttatccagagtaatcactctgtgattatgtataat 417 Query: 269 aacaccatgatcagtttcaacatgcttgaggccgggcgtatcaacggtgtgaagaggttc 328 || || ||||| |||||||| ||| ||||||| | | ||||| || | ||||||||| Sbjct: 418 aatactatgattagtttcaatatgattgaggctgctaggatcaatgggattaagaggttc 477 Query: 329 ttctatgcctcgagcgcatgcatctaccctgaattcaaacagcttgagacaa---atgtg 385 || ||||| ||||| || || ||||| || || || || ||| | ||||| | ||||| Sbjct: 478 ttttatgcttcgagtgcttgtatctatccagagtttaagcagttggagactactaatgtg 537 Query: 386 agcttgaaggaagctgatgcctggcctgctgagccacaagatgcctatggcttggagaag 445 ||||||||||| | ||||| |||||||| ||||| |||||||| ||||| ||||||||| Sbjct: 538 agcttgaaggagtcagatgcttggcctgcagagcctcaagatgcttatggtttggagaag 597 Query: 446 ctcgcgaccgaggagctgtgcaagcactacaccaaggactttgacattgagtgccgtatt 505 || || || |||||| |||| ||||| |||| ||| || |||| |||||||| || ||| Sbjct: 598 cttgctacggaggagttgtgtaagcattacaacaaagattttggtattgagtgtcgaatt 657 Query: 506 ggccgttttcacaacatttatggtccctttggaacatggaaaggcggtcgcgagaaggca 565 || | || || |||||||||||||| ||||||||||||||||| || | |||||||| Sbjct: 658 ggaaggttccataacatttatggtccttttggaacatggaaaggtggaagggagaaggct 717 Query: 566 ccagctgccttctgtagaaaggctcag 592 |||||||| |||||||| ||||||||| Sbjct: 718 ccagctgctttctgtaggaaggctcag 744 Score = 61.9 bits (31), Expect = 2e-06 Identities = 118/147 (80%) Strand = Plus / Plus Query: 16 agctggtggtttcattggatcccatattgctcgccgcctgaagagtgaggggcactacat 75 |||||| |||||||||| ||| || |||||||| || ||||| || || || ||| | Sbjct: 165 agctggaggtttcattgcatctcacattgctcgtcgtttgaagcacgaaggtcattacgt 224 Query: 76 cattgcctctgactggaagaagaacgagcatatgaccgaggacatgttctgccatgagtt 135 ||||| ||||||||||| ||||| || || ||||| || ||||||||||| ||||||| Sbjct: 225 gattgcttctgactggaaaaagaatgaacacatgactgaagacatgttctgtgatgagtt 284 Query: 136 ccaccttgctgacctcagggtcatgga 162 ||| |||| ||| || ||||| ||||| Sbjct: 285 ccatcttgttgatcttagggttatgga 311
>gb|AY057660.1| Arabidopsis thaliana AT5g28840/F7P1_20 mRNA, complete cds Length = 1452 Score = 161 bits (81), Expect = 3e-36 Identities = 311/387 (80%), Gaps = 3/387 (0%) Strand = Plus / Plus Query: 209 gctgctgatatgggaggcatggggttcattcagtccaaccactctgttatcatgtacaat 268 |||||||||||||| || ||||| || || ||| || |||||||| || ||||| ||| Sbjct: 358 gctgctgatatgggtggtatgggttttatccagagtaatcactctgtgattatgtataat 417 Query: 269 aacaccatgatcagtttcaacatgcttgaggccgggcgtatcaacggtgtgaagaggttc 328 || || ||||| |||||||| ||| ||||||| | | ||||| || | ||||||||| Sbjct: 418 aatactatgattagtttcaatatgattgaggctgctaggatcaatgggattaagaggttc 477 Query: 329 ttctatgcctcgagcgcatgcatctaccctgaattcaaacagcttgagacaa---atgtg 385 || ||||| ||||| || || ||||| || || || || ||| | ||||| | ||||| Sbjct: 478 ttttatgcttcgagtgcttgtatctatccagagtttaagcagttggagactactaatgtg 537 Query: 386 agcttgaaggaagctgatgcctggcctgctgagccacaagatgcctatggcttggagaag 445 ||||||||||| | ||||| |||||||| ||||| |||||||| ||||| ||||||||| Sbjct: 538 agcttgaaggagtcagatgcttggcctgcagagcctcaagatgcttatggtttggagaag 597 Query: 446 ctcgcgaccgaggagctgtgcaagcactacaccaaggactttgacattgagtgccgtatt 505 || || || |||||| |||| ||||| |||| ||| || |||| |||||||| || ||| Sbjct: 598 cttgctacggaggagttgtgtaagcattacaacaaagattttggtattgagtgtcgaatt 657 Query: 506 ggccgttttcacaacatttatggtccctttggaacatggaaaggcggtcgcgagaaggca 565 || | || || |||||||||||||| ||||||||||||||||| || | |||||||| Sbjct: 658 ggaaggttccataacatttatggtccttttggaacatggaaaggtggaagggagaaggct 717 Query: 566 ccagctgccttctgtagaaaggctcag 592 |||||||| |||||||| ||||||||| Sbjct: 718 ccagctgctttctgtaggaaggctcag 744 Score = 61.9 bits (31), Expect = 2e-06 Identities = 118/147 (80%) Strand = Plus / Plus Query: 16 agctggtggtttcattggatcccatattgctcgccgcctgaagagtgaggggcactacat 75 |||||| |||||||||| ||| || |||||||| || ||||| || || || ||| | Sbjct: 165 agctggaggtttcattgcatctcacattgctcgtcgtttgaagcacgaaggtcattacgt 224 Query: 76 cattgcctctgactggaagaagaacgagcatatgaccgaggacatgttctgccatgagtt 135 ||||| ||||||||||| ||||| || || ||||| || ||||||||||| ||||||| Sbjct: 225 gattgcttctgactggaaaaagaatgaacacatgactgaagacatgttctgtgatgagtt 284 Query: 136 ccaccttgctgacctcagggtcatgga 162 ||| |||| ||| || ||||| ||||| Sbjct: 285 ccatcttgttgatcttagggttatgga 311
>gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb0006I13 chromosome 10, complete sequence Length = 142737 Score = 133 bits (67), Expect = 7e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 455 gaggagctgtgcaagcactacaccaaggactttgacattgagtgccgtattggccgtttt 514 |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||| || Sbjct: 13 gaggagctctgcaagcactacaccaaggactttggcattgagtgccgtgttggccgcttc 72 Query: 515 cacaacatttatggtccctttggaacatggaaagg 549 |||||||| ||||| |||||||||||||||||||| Sbjct: 73 cacaacatatatggcccctttggaacatggaaagg 107 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Plus Query: 557 gagaaggcaccagctgccttctgtagaaaggctcag 592 ||||||||||||||||| ||||| || ||||||||| Sbjct: 194 gagaaggcaccagctgcattctgcaggaaggctcag 229
>gb|AF272706.1|F7P1 Arabidopsis thaliana BAC F7P1 Length = 110714 Score = 89.7 bits (45), Expect = 1e-14 Identities = 111/133 (83%) Strand = Plus / Minus Query: 417 agccacaagatgcctatggcttggagaagctcgcgaccgaggagctgtgcaagcactaca 476 |||| |||||||| ||||| ||||||||||| || || |||||| |||| ||||| |||| Sbjct: 19542 agcctcaagatgcttatggtttggagaagcttgctacggaggagttgtgtaagcattaca 19483 Query: 477 ccaaggactttgacattgagtgccgtattggccgttttcacaacatttatggtccctttg 536 ||| || |||| |||||||| || ||||| | || || |||||||||||||| |||| Sbjct: 19482 acaaagattttggtattgagtgtcgaattggaaggttccataacatttatggtccttttg 19423 Query: 537 gaacatggaaagg 549 ||||||||||||| Sbjct: 19422 gaacatggaaagg 19410 Score = 61.9 bits (31), Expect = 2e-06 Identities = 118/147 (80%) Strand = Plus / Minus Query: 16 agctggtggtttcattggatcccatattgctcgccgcctgaagagtgaggggcactacat 75 |||||| |||||||||| ||| || |||||||| || ||||| || || || ||| | Sbjct: 20109 agctggaggtttcattgcatctcacattgctcgtcgtttgaagcacgaaggtcattacgt 20050 Query: 76 cattgcctctgactggaagaagaacgagcatatgaccgaggacatgttctgccatgagtt 135 ||||| ||||||||||| ||||| || || ||||| || ||||||||||| ||||||| Sbjct: 20049 gattgcttctgactggaaaaagaatgaacacatgactgaagacatgttctgtgatgagtt 19990 Query: 136 ccaccttgctgacctcagggtcatgga 162 ||| |||| ||| || ||||| ||||| Sbjct: 19989 ccatcttgttgatcttagggttatgga 19963 Score = 48.1 bits (24), Expect = 0.033 Identities = 75/92 (81%) Strand = Plus / Minus Query: 209 gctgctgatatgggaggcatggggttcattcagtccaaccactctgttatcatgtacaat 268 |||||||||||||| || ||||| || || ||| || |||||||| || ||||| ||| Sbjct: 19916 gctgctgatatgggtggtatgggttttatccagagtaatcactctgtgattatgtataat 19857 Query: 269 aacaccatgatcagtttcaacatgcttgaggc 300 || || ||||| |||||||| ||| ||||||| Sbjct: 19856 aatactatgattagtttcaatatgattgaggc 19825
>dbj|AB235855.1| Oryza sativa (japonica cultivar-group) OsGME mRNA for GDP-mannose-3'',5''-epimerase, complete cds Length = 1053 Score = 79.8 bits (40), Expect = 9e-12 Identities = 151/188 (80%) Strand = Plus / Plus Query: 389 ttgaaggaagctgatgcctggcctgctgagccacaagatgcctatggcttggagaagctc 448 |||||||| ||||||| ||||| || | || |||||||||||||| | || |||||| Sbjct: 418 ttgaaggagtctgatgcttggcccgcgcaacctcaagatgcctatggtcttgaaaagctc 477 Query: 449 gcgaccgaggagctgtgcaagcactacaccaaggactttgacattgagtgccgtattggc 508 | ||||| ||| | |||||| |||||| ||||||||||| |||||||| ||| ||||| Sbjct: 478 gttaccgaagagttctgcaagtactacaacaaggactttggcattgagttccgcattggt 537 Query: 509 cgttttcacaacatttatggtccctttggaacatggaaaggcggtcgcgagaaggcacca 568 || || |||||||| || || ||| || || ||||| || |||||||||||||| || Sbjct: 538 cgcttccacaacatctacggcccccacggcacttggaagggtggtcgcgagaaggccccc 597 Query: 569 gctgcctt 576 |||||||| Sbjct: 598 gctgcctt 605 Score = 75.8 bits (38), Expect = 1e-10 Identities = 74/86 (86%) Strand = Plus / Plus Query: 207 ttgctgctgatatgggaggcatggggttcattcagtccaaccactctgttatcatgtaca 266 ||||||| |||||||| || ||||| || ||||| |||||||||||||||||| |||||| Sbjct: 230 ttgctgcagatatgggcggtatgggttttattcaatccaaccactctgttatcttgtaca 289 Query: 267 ataacaccatgatcagtttcaacatg 292 | || | |||||||| ||||||||| Sbjct: 290 acaatattatgatcagcttcaacatg 315
>dbj|AK109046.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-D11, full insert sequence Length = 1134 Score = 79.8 bits (40), Expect = 9e-12 Identities = 151/188 (80%) Strand = Plus / Plus Query: 389 ttgaaggaagctgatgcctggcctgctgagccacaagatgcctatggcttggagaagctc 448 |||||||| ||||||| ||||| || | || |||||||||||||| | || |||||| Sbjct: 438 ttgaaggagtctgatgcttggcccgcgcaacctcaagatgcctatggtcttgaaaagctc 497 Query: 449 gcgaccgaggagctgtgcaagcactacaccaaggactttgacattgagtgccgtattggc 508 | ||||| ||| | |||||| |||||| ||||||||||| |||||||| ||| ||||| Sbjct: 498 gttaccgaagagttctgcaagtactacaacaaggactttggcattgagttccgcattggt 557 Query: 509 cgttttcacaacatttatggtccctttggaacatggaaaggcggtcgcgagaaggcacca 568 || || |||||||| || || ||| || || ||||| || |||||||||||||| || Sbjct: 558 cgcttccacaacatctacggcccccacggcacttggaagggtggtcgcgagaaggccccc 617 Query: 569 gctgcctt 576 |||||||| Sbjct: 618 gctgcctt 625 Score = 75.8 bits (38), Expect = 1e-10 Identities = 74/86 (86%) Strand = Plus / Plus Query: 207 ttgctgctgatatgggaggcatggggttcattcagtccaaccactctgttatcatgtaca 266 ||||||| |||||||| || ||||| || ||||| |||||||||||||||||| |||||| Sbjct: 250 ttgctgcagatatgggcggtatgggttttattcaatccaaccactctgttatcttgtaca 309 Query: 267 ataacaccatgatcagtttcaacatg 292 | || | |||||||| ||||||||| Sbjct: 310 acaatattatgatcagcttcaacatg 335
>dbj|AK118786.1| Arabidopsis thaliana mRNA, clone: RAFL21-11-O14 Length = 550 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 518 aacatttatggtccctttggaacatggaaagg 549 |||||||||||||| ||||||||||||||||| Sbjct: 526 aacatttatggtccttttggaacatggaaagg 495
>gb|AC135505.15| Medicago truncatula clone mth2-24j8, complete sequence Length = 124563 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 419 ccacaagatgcctatggcttg 439 ||||||||||||||||||||| Sbjct: 46039 ccacaagatgcctatggcttg 46059
>gb|U80928.5|REU80928 Rhizobium etli strain CFN42 symbiotic plasmid p42d, complete sequence Length = 371254 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 437 ttggagaagctcgcgaccgag 457 ||||||||||||||||||||| Sbjct: 170682 ttggagaagctcgcgaccgag 170662
>ref|XM_418410.1| PREDICTED: Gallus gallus similar to RHPN1 protein (LOC420299), mRNA Length = 3132 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 560 aaggcaccagctgccttctg 579 |||||||||||||||||||| Sbjct: 725 aaggcaccagctgccttctg 706
>gb|AC102129.9| Mus musculus chromosome 7, clone RP23-220N19, complete sequence Length = 178200 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 149 ctcagggtcatggacaactgcctt 172 ||||||||||||| |||||||||| Sbjct: 88988 ctcagggtcatggtcaactgcctt 88965
>gb|AY811578.1| Schistosoma japonicum SJCHGC07480 protein mRNA, partial cds Length = 616 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 366 aacagcttgagacaaatgtgagcttgaa 393 ||||||||||||| ||||||| |||||| Sbjct: 367 aacagcttgagactaatgtgaacttgaa 394
>gb|AC160553.7| Mus musculus chromosome 7, clone RP23-334C12, complete sequence Length = 191999 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 149 ctcagggtcatggacaactgcctt 172 ||||||||||||| |||||||||| Sbjct: 190033 ctcagggtcatggtcaactgcctt 190010
>emb|BX510937.6| Zebrafish DNA sequence from clone DKEY-90G19 in linkage group 6, complete sequence Length = 92200 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 tttcacaacatttatggtcc 531 |||||||||||||||||||| Sbjct: 21987 tttcacaacatttatggtcc 22006
>emb|BX546446.15| Zebrafish DNA sequence from clone DKEY-7K24 in linkage group 6, complete sequence Length = 196818 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 tttcacaacatttatggtcc 531 |||||||||||||||||||| Sbjct: 81157 tttcacaacatttatggtcc 81176
>gb|AC162182.2| Mus musculus BAC clone RP23-73B23 from chromosome 17, complete sequence Length = 205221 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 cagcttgagacaaatgtgag 387 |||||||||||||||||||| Sbjct: 155490 cagcttgagacaaatgtgag 155509
>emb|CR353063.1| Gallus gallus finished cDNA, clone ChEST419d21 Length = 872 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 560 aaggcaccagctgccttctg 579 |||||||||||||||||||| Sbjct: 118 aaggcaccagctgccttctg 99
>gb|AC158550.4| Mus musculus chromosome 7, clone RP24-192B7, complete sequence Length = 169846 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 149 ctcagggtcatggacaactgcctt 172 ||||||||||||| |||||||||| Sbjct: 26468 ctcagggtcatggtcaactgcctt 26445
>gb|AC102476.14| Mus musculus chromosome 5, clone RP24-396L12, complete sequence Length = 181047 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 agctggtggtttcattggat 35 |||||||||||||||||||| Sbjct: 47749 agctggtggtttcattggat 47730
>emb|CR774199.4| Zebrafish DNA sequence from clone CH211-42H24 in linkage group 14, complete sequence Length = 162722 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 508 ccgttttcacaacatttatggtcc 531 ||||||||||| |||||||||||| Sbjct: 84381 ccgttttcacaccatttatggtcc 84358
>gb|AC153584.5| Mus musculus 6 BAC RP23-27C9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208921 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 tgcctggcctgctgagccac 422 |||||||||||||||||||| Sbjct: 128508 tgcctggcctgctgagccac 128527
>gb|AC160645.2| Gallus gallus BAC clone CH261-21L11 from chromosome unknown, complete sequence Length = 223748 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 560 aaggcaccagctgccttctg 579 |||||||||||||||||||| Sbjct: 169751 aaggcaccagctgccttctg 169770 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,918,662 Number of Sequences: 3902068 Number of extensions: 4918662 Number of successful extensions: 85298 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 40 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 85103 Number of HSP's gapped (non-prelim): 191 length of query: 592 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 569 effective length of database: 17,143,297,704 effective search space: 9754536393576 effective search space used: 9754536393576 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
