>UVRC_SYNPX (Q7U6U0) UvrABC system protein C (Protein uvrC) (Excinuclease ABC|
           subunit C)
          Length = 652

 Score = 32.3 bits (72), Expect = 0.35
 Identities = 23/66 (34%), Positives = 33/66 (50%)
 Frame = -2

Query: 198 VVGAVGHGADDLRDGALPPGHQLHRVLPRRHREVGRVDVPHRLERLDDPPRQRRRHVLXD 19
           +VG +G+ AD     AL PG  L RV+   + +V  V+VP  L      P+Q+   +L D
Sbjct: 283 LVGRLGYTADA---SALAPGLILQRVIEEHYSQVDAVEVPPELLVQHALPQQQ---LLED 336

Query: 18  WAAAAR 1
           W    R
Sbjct: 337 WLTEQR 342

>REC8L_HUMAN (O95072) Meiotic recombination protein REC8-like 1 (Cohesin Rec8p)|
          Length = 547

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = -2

Query: 177 GADDLRDGALPPGHQLHRVLPRRHREVGRVDVPHRLERLDDPPRQRRRHVLXDW 16
           G ++LR     PG  L  V P     +     P R   +  PPR+RRR  L  W
Sbjct: 255 GPEELRLTGWEPGALLMEVTPPEELRLPAPPSPERRPPVPPPPRRRRRRRLLFW 308

>BC11A_HUMAN (Q9H165) B-cell lymphoma/leukemia 11A (B-cell CLL/lymphoma 11A)|
           (COUP-TF-interacting protein 1) (Ecotropic viral
           integration site 9 protein) (EVI-9)
          Length = 835

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = -2

Query: 198 VVGAVGHGADDLRDGALPPGHQLHRVLPRRHREVGRVDVPHRLERL 61
           + G+V   A  L +G  PP   L    PR H +      PHR+ERL
Sbjct: 243 IPGSVSREASGLAEGRFPPTPPLFSPPPRHHLD------PHRIERL 282

>BC11A_MOUSE (Q9QYE3) B-cell lymphoma/leukemia 11A (B-cell CLL/lymphoma 11A)|
           (COUP-TF-interacting protein 1) (Ecotropic viral
           integration site 9 protein) (EVI-9)
          Length = 773

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = -2

Query: 198 VVGAVGHGADDLRDGALPPGHQLHRVLPRRHREVGRVDVPHRLERL 61
           + G+V   A  L +G  PP   L    PR H +      PHR+ERL
Sbjct: 243 IPGSVSREASGLAEGRFPPTPPLFSPPPRHHLD------PHRIERL 282

>DMBT1_MOUSE (Q60997) Deleted in malignant brain tumors 1 protein precursor|
            (CRP-ductin) (Vomeroglandin)
          Length = 2085

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +1

Query: 28   DVTSPLPGWIIESLKAVRYIDAAHFSVPAGQYAVELVAG 144
            +VTSP PGW   S   V Y      + P+GQ++     G
Sbjct: 1613 EVTSPSPGWWTTSPSYVNYTCGGFLTQPSGQFSSPFYPG 1651

>ISPF_GEOSL (Q747A0) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC|
           4.6.1.12) (MECPS) (MECDP-synthase)
          Length = 157

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -2

Query: 141 GHQLHRVLPRRHREVGRVDVPHRLERLDDPPRQRRRHVLXD 19
           G+ +HR++  R   VG VD+PH L  L         H + D
Sbjct: 6   GYDVHRLVAGRKLIVGGVDIPHELGLLGHSDADVLLHAISD 46

>PCRB_PYRAE (Q8ZTX5) Protein pcrB homolog|
          Length = 239

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
 Frame = +1

Query: 55  IIESLKAVRYIDAAHFSVPAGQYAVELVAG----RESAIAQVIRTVPN 186
           +I+  K+V Y+  A +++ AG   + L+ G    RES IAQV++ + N
Sbjct: 16  LIDPDKSVDYLKIAKYALEAGTDGI-LIGGSLGIRESQIAQVVKDIKN 62

>GYRB_MYCLE (Q59533) DNA gyrase subunit B (EC 5.99.1.3)|
          Length = 678

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
 Frame = -2

Query: 174 ADDLRDGALPPGHQLHRVLPR-----RHREVGRVDVPHRLERLDDPPRQRRRHVLXDWAA 10
           +D  RDG L  G +L + + +     R++ +G +D     E   DP  +  R V  D AA
Sbjct: 586 SDSERDGLLETGLKLGKKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAA 645

Query: 9   AA 4
           AA
Sbjct: 646 AA 647


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,159,694
Number of Sequences: 219361
Number of extensions: 384775
Number of successful extensions: 1777
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1774
length of database: 80,573,946
effective HSP length: 41
effective length of database: 71,580,145
effective search space used: 1717923480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)