Clone Name	bags28a10
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AK121431.1| Oryza sativa (japonica cultivar-group) cDNA clon...	426	e-116
2	dbj|AK064987.1| Oryza sativa (japonica cultivar-group) cDNA clon...	426	e-116
3	gb|AF007795.1|AF007795 Zea mays retinoblastoma-related protein 2...	264	3e-67
4	gb|AF007794.1|AF007794 Zea mays retinoblastoma-related protein 2...	264	3e-67
5	emb|X98923.1|ZMRB1 Z.mays mRNA for Rb1 protein	240	5e-60
6	gb|AF250050.1| Zea mays retinoblastoma related protein RBR1 (rbr...	240	5e-60
7	gb|AF007793.1|AF007793 Zea mays retinoblastoma-related protein 1...	240	5e-60
8	gb|BT016548.1| Zea mays clone Contig381 mRNA sequence	232	1e-57
9	gb|U52099.2|ZMU52099 Zea mays retinoblastoma-like protein (ZmRB)...	232	1e-57
10	emb|AJ279062.2|ZMA279062 Zea mays rbr2 gene for retinoblastoma-r...	190	4e-45
11	gb|AY109777.1| Zea mays CL1187_-3 mRNA sequence	176	6e-41
12	gb|AY109345.1| Zea mays CL1187_1 mRNA sequence	168	1e-38
13	gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome...	131	3e-27
14	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	131	3e-27
15	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	131	3e-27
16	gb|AY117036.1| Cocos nucifera retinoblastoma-like protein (Rb1) ...	92	3e-15
17	gb|AC118708.4| Mus musculus chromosome 7, clone RP24-118K11, com...	42	2.2
18	gb|BC083369.1| Danio rerio zgc:103420, mRNA (cDNA clone MGC:1034...	42	2.2
19	gb|AC146174.2| Pan troglodytes BAC clone CH251-549F12 from Y, co...	42	2.2
20	emb|BX927257.11| Zebrafish DNA sequence from clone CH211-122I22 ...	42	2.2
21	emb|AL844222.19| Mouse DNA sequence from clone RP23-44P13 on chr...	42	2.2
22	emb|AL591708.10| Human DNA sequence from clone RP13-634N5 on chr...	42	2.2
23	emb|AL390788.15| Human DNA sequence from clone RP11-384P5 on chr...	42	2.2
24	emb|AL139156.11| Human DNA sequence from clone RP4-800M22 on chr...	42	2.2
25	dbj|BS000614.1| Pan troglodytes chromosome Y clone:PTBY-009K01, ...	42	2.2
26	dbj|BS000556.1| Pan troglodytes chromosome Y clone:PTB-461C11, c...	42	2.2
27	gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence	42	2.2
28	gb|AC006040.3|AC006040 Homo sapiens BAC clone RP11-400O10 from Y...	42	2.2
29	emb|BX932701.1| Gallus gallus finished cDNA, clone ChEST493k13	42	2.2
30	gb|AC105754.3| Homo sapiens chromosome 1 clone RP4-814E15, compl...	42	2.2
31	ref|NM_001006043.1| Danio rerio zgc:103420 (zgc:103420), mRNA	42	2.2
32	gb|AF230739.1|AF230739 Euphorbia esula retinoblastoma-like prote...	42	2.2
33	gb|AC119196.12| Mus musculus chromosome 7, clone RP24-179I13, co...	42	2.2
34	gb|AF041427.1|AF041427 Homo sapiens ribosomal protein s4 Y isofo...	42	2.2
35	gb|AY832292.1| Platanus occidentalis ribosomal protein S4 (rps4)...	42	2.2
36	gb|AY832286.1| Calycanthus floridus ribosomal protein S4 (rps4) ...	42	2.2
37	dbj|AB071771.1| Capsicum annuum rps4 gene for ribosomal protein ...	42	2.2
38	gb|AC139130.10| Mus musculus chromosome 15, clone RP23-210B16, c...	40	8.6
39	gb|AC158943.9| Mus musculus chromosome 1, clone RP24-272N10, com...	40	8.6
40	gb|AE006267.1| Lactococcus lactis subsp. lactis IL1403 section 2...	40	8.6
41	ref|XM_657666.1| Aspergillus nidulans FGSC A4 hypothetical prote...	40	8.6
42	gb|AC166939.2| Mus musculus BAC clone RP23-72K19 from chromosome...	40	8.6
43	gb|AC124529.3| Mus musculus BAC clone RP23-411I8 from chromosome...	40	8.6
44	gb|AC122890.4| Mus musculus BAC clone RP23-63O14 from 8, complet...	40	8.6
45	ref|XM_661829.1| Cryptosporidium hominis TU502 hypothetical prot...	40	8.6
46	gb|AC146745.20| Medicago truncatula clone mth2-53p19, complete s...	40	8.6
47	gb|AC149637.11| Medicago truncatula clone mth2-181h2, complete s...	40	8.6
48	emb|AL442224.17| Human DNA sequence from clone RP11-53B5 on chro...	40	8.6
49	emb|AL022329.9|HS407F11 Human DNA sequence from clone CTA-407F11...	40	8.6
50	gb|AC104890.16| Mus musculus chromosome 1, clone RP23-260J11, co...	40	8.6
51	gb|AC151726.31| Medicago truncatula clone mth2-22e22, complete s...	40	8.6
52	gb|AC159537.24| Medicago truncatula clone mth2-188k3, complete s...	40	8.6
53	gb|AC169120.12| Medicago truncatula clone mth2-84o2, complete se...	40	8.6
54	dbj|AK056925.1| Homo sapiens cDNA FLJ32363 fis, clone PUAEN1000081	40	8.6
55	gb|AC114310.2| Homo sapiens chromosome 5 clone RP11-285K13, comp...	40	8.6
56	gb|AC114956.2| Homo sapiens chromosome 5 clone RP11-159F24, comp...	40	8.6
57	gb|AE010151.1| Pyrococcus furiosus DSM 3638, section 26 of 173 o...	40	8.6
58	gb|AC009475.5| Homo sapiens BAC clone RP11-285F23 from 2, comple...	40	8.6
59	ref|NM_198566.1| Homo sapiens FLJ32363 protein (FLJ32363), mRNA	40	8.6
60	dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete ge...	40	8.6
61	gb|AF235093.1|AF235093 Homo sapiens chromosome 21 map 21q21 clon...	40	8.6
62	dbj|BS000022.1| Pan troglodytes chromosome 22 clone:PTB-131J13, ...	40	8.6
63	emb|AL954362.9| Mouse DNA sequence from clone RP23-345L22 on chr...	40	8.6
64	emb|AL163210.2|HS21C010 Homo sapiens chromosome 21 segment HS21C010	40	8.6
65	gb|BC036867.1| Homo sapiens FLJ32363 protein, mRNA (cDNA clone M...	40	8.6
66	gb|AC147152.3| Mus musculus BAC clone RP24-257J19 from 3, comple...	40	8.6
67	emb|AL109762.3|HSM24152 Homo sapiens chromosome 21 sequence from...	40	8.6
68	emb|AJ010598.1|HS135E14 Homo sapiens chromosome 21 PAC RPCIP704E...	40	8.6
69	gb|AC151299.3| Mus musculus BAC clone RP23-11N17 from chromosome...	40	8.6

---

>dbj|AK121431.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138G19, full
            insert sequence
          Length = 3384

 Score =  426 bits (215), Expect = e-116
 Identities = 510/608 (83%), Gaps = 1/608 (0%)
 Strand = Plus / Plus

                                                                        
Query: 12   tcttgaagttggctgctattagaataaggaacttgtgtgaaaggcttgggcatgtggaac 71
            |||||||||||||||||||||||||||| ||| | |||||||||||  | ||||  || |
Sbjct: 2313 tcttgaagttggctgctattagaataagaaacctatgtgaaaggctacgacatgaagagc 2372

                                                                        
Query: 72   agacagagcgtgtgtataatatcttcaagcagattcttgatcaacagacagctttatttt 131
             ||| | | | || ||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 2373 tgactgtgagcgtctataatatctttaagcagattcttgaccaacagacagctttatttt 2432

                                                                        
Query: 132  ttaatcgacacattgatcagcttattctttgttccctctatggtgttgcaaaggtttccc 191
            | ||  ||||| |||| ||  | |||||||| | ||||||||||||||| |||||||| |
Sbjct: 2433 tcaacagacacgttgaccaaatcattctttgctgcctctatggtgttgccaaggtttctc 2492

                                                                        
Query: 192  aattaacgctgacgttcaaggagattgtcaataattacaaaagagaacagcaatgtatgc 251
            ||||| |  |||||||||||||||| ||||| ||||| || || || |  |||||||  |
Sbjct: 2493 aattatcattgacgttcaaggagatcgtcaacaattataagagggagccacaatgtaaac 2552

                                                                        
Query: 252  cagaagtttttagaagcgtctttgttgtgaatacagatcacaatggaggacttggatcac 311
            |||||||||| |||||  ||||||||| || |||| ||| |||||| ||| |||||||||
Sbjct: 2553 cagaagttttcagaagtatctttgttgggagtacaaatcgcaatggtggatttggatcac 2612

                                                                        
Query: 312  gccatgttgacatcattattttttataatgaggtgtttgttccagcagtcaagcctttcc 371
            | |||||||| |||||| ||||||||||| | || ||||||||  | ||||| ||||| |
Sbjct: 2613 gtcatgttgatatcattgttttttataatcaagtatttgttcccacggtcaaacctttgc 2672

                                                                        
Query: 372  tggtggcactaattccttctggtgctcatccagacaacaagaagaatcataatagccaaa 431
            ||||||| ||||| |||||| || ||| ||| ||  |||||| |||   |||||||||||
Sbjct: 2673 tggtggctctaatgccttctagtactcgtcctgaagacaagaggaacactaatagccaaa 2732

                                                                        
Query: 432  ttcctggatcaccaaagtcatctccctttctcaaatctaccagatatgtccccaaagaaa 491
            ||||||||||||| ||||||||| |||||||||||| |||||||||||||||| ||||||
Sbjct: 2733 ttcctggatcacccaagtcatct-cctttctcaaatttaccagatatgtccccgaagaaa 2791

                                                                        
Query: 492  gtctcatcttcccataatgtttatatttctcctctgcgtcaaaccaagaaggatgcattg 551
            ||||||||||| |||||||| ||| | |||||||| || ||||| |||| ||||||||||
Sbjct: 2792 gtctcatcttctcataatgtgtatgtctctcctctacgacaaactaagatggatgcattg 2851

                                                                        
Query: 552  ctttcaccaagttcgaggagtttttatgcttgnatcggngaaagcacccatgcttatcan 611
            ||||||||||||||  ||||||| || || || ||||| |||||||| || |||| ||| 
Sbjct: 2852 ctttcaccaagttcacggagtttctacgcgtgcatcggtgaaagcactcaagcttttcag 2911

                    
Query: 612  agctcatc 619
            ||| ||||
Sbjct: 2912 agcccatc 2919

---

>dbj|AK064987.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001D03, full
            insert sequence
          Length = 3332

 Score =  426 bits (215), Expect = e-116
 Identities = 510/608 (83%), Gaps = 1/608 (0%)
 Strand = Plus / Plus

                                                                        
Query: 12   tcttgaagttggctgctattagaataaggaacttgtgtgaaaggcttgggcatgtggaac 71
            |||||||||||||||||||||||||||| ||| | |||||||||||  | ||||  || |
Sbjct: 2272 tcttgaagttggctgctattagaataagaaacctatgtgaaaggctacgacatgaagagc 2331

                                                                        
Query: 72   agacagagcgtgtgtataatatcttcaagcagattcttgatcaacagacagctttatttt 131
             ||| | | | || ||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 2332 tgactgtgagcgtctataatatctttaagcagattcttgaccaacagacagctttatttt 2391

                                                                        
Query: 132  ttaatcgacacattgatcagcttattctttgttccctctatggtgttgcaaaggtttccc 191
            | ||  ||||| |||| ||  | |||||||| | ||||||||||||||| |||||||| |
Sbjct: 2392 tcaacagacacgttgaccaaatcattctttgctgcctctatggtgttgccaaggtttctc 2451

                                                                        
Query: 192  aattaacgctgacgttcaaggagattgtcaataattacaaaagagaacagcaatgtatgc 251
            ||||| |  |||||||||||||||| ||||| ||||| || || || |  |||||||  |
Sbjct: 2452 aattatcattgacgttcaaggagatcgtcaacaattataagagggagccacaatgtaaac 2511

                                                                        
Query: 252  cagaagtttttagaagcgtctttgttgtgaatacagatcacaatggaggacttggatcac 311
            |||||||||| |||||  ||||||||| || |||| ||| |||||| ||| |||||||||
Sbjct: 2512 cagaagttttcagaagtatctttgttgggagtacaaatcgcaatggtggatttggatcac 2571

                                                                        
Query: 312  gccatgttgacatcattattttttataatgaggtgtttgttccagcagtcaagcctttcc 371
            | |||||||| |||||| ||||||||||| | || ||||||||  | ||||| ||||| |
Sbjct: 2572 gtcatgttgatatcattgttttttataatcaagtatttgttcccacggtcaaacctttgc 2631

                                                                        
Query: 372  tggtggcactaattccttctggtgctcatccagacaacaagaagaatcataatagccaaa 431
            ||||||| ||||| |||||| || ||| ||| ||  |||||| |||   |||||||||||
Sbjct: 2632 tggtggctctaatgccttctagtactcgtcctgaagacaagaggaacactaatagccaaa 2691

                                                                        
Query: 432  ttcctggatcaccaaagtcatctccctttctcaaatctaccagatatgtccccaaagaaa 491
            ||||||||||||| ||||||||| |||||||||||| |||||||||||||||| ||||||
Sbjct: 2692 ttcctggatcacccaagtcatct-cctttctcaaatttaccagatatgtccccgaagaaa 2750

                                                                        
Query: 492  gtctcatcttcccataatgtttatatttctcctctgcgtcaaaccaagaaggatgcattg 551
            ||||||||||| |||||||| ||| | |||||||| || ||||| |||| ||||||||||
Sbjct: 2751 gtctcatcttctcataatgtgtatgtctctcctctacgacaaactaagatggatgcattg 2810

                                                                        
Query: 552  ctttcaccaagttcgaggagtttttatgcttgnatcggngaaagcacccatgcttatcan 611
            ||||||||||||||  ||||||| || || || ||||| |||||||| || |||| ||| 
Sbjct: 2811 ctttcaccaagttcacggagtttctacgcgtgcatcggtgaaagcactcaagcttttcag 2870

                    
Query: 612  agctcatc 619
            ||| ||||
Sbjct: 2871 agcccatc 2878

---

>gb|AF007795.1|AF007795 Zea mays retinoblastoma-related protein 2b (RRB2b) mRNA, partial cds
          Length = 2538

 Score =  264 bits (133), Expect = 3e-67
 Identities = 275/322 (85%), Gaps = 1/322 (0%)
 Strand = Plus / Plus

                                                                        
Query: 307  atcacgccatgttgacatcattattttttataatgaggtgtttgttccagcagtcaagcc 366
            ||||||||||||||| ||||||| |||||| |||||||| ||||||||||||| ||||||
Sbjct: 1338 atcacgccatgttgatatcattactttttacaatgaggtctttgttccagcagccaagcc 1397

                                                                        
Query: 367  tttcctggtggcactaattccttctggtgctcatccagacaacaagaagaatcataatag 426
            |||||||||| || ||||  | |||||| ||| ||||||  |||||||||||  || | |
Sbjct: 1398 tttcctggtgtcattaatatcatctggtactcgtccagaagacaagaagaatgctagtgg 1457

                                                                        
Query: 427  ccaaattcctggatcaccaaagtcatctccctttctcaaatctaccagatatgtccccaa 486
            |||| ||||||||||||| |||  |||||| |||| ||||| ||||||||||||||||||
Sbjct: 1458 ccaagttcctggatcaccgaagctatctcc-tttcccaaatttaccagatatgtccccaa 1516

                                                                        
Query: 487  agaaagtctcatcttcccataatgtttatatttctcctctgcgtcaaaccaagaaggatg 546
            ||||||| ||| |||| |||||||| ||| | |||||| |||| |||||||||| |||| 
Sbjct: 1517 agaaagtttcagcttctcataatgtatatgtgtctcctttgcggcaaaccaagatggatt 1576

                                                                        
Query: 547  cattgctttcaccaagttcgaggagtttttatgcttgnatcggngaaagcacccatgctt 606
             | |||| ||||||||||| |||||||||||||| || || || ||| ||||||||||||
Sbjct: 1577 tactgctgtcaccaagttccaggagtttttatgcatgcattggtgaaggcacccatgctt 1636

                                  
Query: 607  atcanagctcatctgaagattt 628
            |||| ||| ||||| |||||||
Sbjct: 1637 atcagagcccatctaaagattt 1658



 Score =  194 bits (98), Expect = 2e-46
 Identities = 161/182 (88%)
 Strand = Plus / Plus

                                                                        
Query: 15   tgaagttggctgctattagaataaggaacttgtgtgaaaggcttgggcatgtggaacaga 74
            ||||||| ||||||||||||||||| ||||||||||||||| ||    || |||||||||
Sbjct: 1046 tgaagttagctgctattagaataagaaacttgtgtgaaaggattcaatatatggaacaga 1105

                                                                        
Query: 75   cagagcgtgtgtataatatcttcaagcagattcttgatcaacagacagctttatttttta 134
            |||||||||| |||||| ||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 1106 cagagcgtgtctataatgtcttcaagcagattcttgatcaacagacaacattatttttta 1165

                                                                        
Query: 135  atcgacacattgatcagcttattctttgttccctctatggtgttgcaaaggtttcccaat 194
            || |||||||  |||| ||||||||||| |  || ||||||||||||||||||| |||||
Sbjct: 1166 atagacacatgcatcaacttattctttgctgtctttatggtgttgcaaaggtttgccaat 1225

              
Query: 195  ta 196
            ||
Sbjct: 1226 ta 1227

---

>gb|AF007794.1|AF007794 Zea mays retinoblastoma-related protein 2a (RRB2a) mRNA, partial cds
          Length = 2945

 Score =  264 bits (133), Expect = 3e-67
 Identities = 275/322 (85%), Gaps = 1/322 (0%)
 Strand = Plus / Plus

                                                                        
Query: 307  atcacgccatgttgacatcattattttttataatgaggtgtttgttccagcagtcaagcc 366
            ||||||||||||||| ||||||| |||||| |||||||| ||||||||||||| ||||||
Sbjct: 767  atcacgccatgttgatatcattactttttacaatgaggtctttgttccagcagccaagcc 826

                                                                        
Query: 367  tttcctggtggcactaattccttctggtgctcatccagacaacaagaagaatcataatag 426
            |||||||||| || ||||  | |||||| ||| ||||||  |||||||||||  || | |
Sbjct: 827  tttcctggtgtcattaatatcatctggtactcgtccagaagacaagaagaatgctagtgg 886

                                                                        
Query: 427  ccaaattcctggatcaccaaagtcatctccctttctcaaatctaccagatatgtccccaa 486
            |||| ||||||||||||| |||  |||||| |||| ||||| ||||||||||||||||||
Sbjct: 887  ccaagttcctggatcaccgaagctatctcc-tttcccaaatttaccagatatgtccccaa 945

                                                                        
Query: 487  agaaagtctcatcttcccataatgtttatatttctcctctgcgtcaaaccaagaaggatg 546
            ||||||| ||| |||| |||||||| ||| | |||||| |||| |||||||||| |||| 
Sbjct: 946  agaaagtttcagcttctcataatgtatatgtgtctcctttgcggcaaaccaagatggatt 1005

                                                                        
Query: 547  cattgctttcaccaagttcgaggagtttttatgcttgnatcggngaaagcacccatgctt 606
             | |||| ||||||||||| |||||||||||||| || || || ||| ||||||||||||
Sbjct: 1006 tactgctgtcaccaagttccaggagtttttatgcatgcattggtgaaggcacccatgctt 1065

                                  
Query: 607  atcanagctcatctgaagattt 628
            |||| ||| ||||| |||||||
Sbjct: 1066 atcagagcccatctaaagattt 1087



 Score =  194 bits (98), Expect = 2e-46
 Identities = 161/182 (88%)
 Strand = Plus / Plus

                                                                       
Query: 15  tgaagttggctgctattagaataaggaacttgtgtgaaaggcttgggcatgtggaacaga 74
           ||||||| ||||||||||||||||| ||||||||||||||| ||    || |||||||||
Sbjct: 475 tgaagttagctgctattagaataagaaacttgtgtgaaaggattcaatatatggaacaga 534

                                                                       
Query: 75  cagagcgtgtgtataatatcttcaagcagattcttgatcaacagacagctttatttttta 134
           |||||||||| |||||| ||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 535 cagagcgtgtctataatgtcttcaagcagattcttgatcaacagacaacattatttttta 594

                                                                       
Query: 135 atcgacacattgatcagcttattctttgttccctctatggtgttgcaaaggtttcccaat 194
           || |||||||  |||| ||||||||||| |  || ||||||||||||||||||| |||||
Sbjct: 595 atagacacatgcatcaacttattctttgctgtctttatggtgttgcaaaggtttgccaat 654

             
Query: 195 ta 196
           ||
Sbjct: 655 ta 656

---

>emb|X98923.1|ZMRB1 Z.mays mRNA for Rb1 protein
          Length = 3747

 Score =  240 bits (121), Expect = 5e-60
 Identities = 263/310 (84%), Gaps = 1/310 (0%)
 Strand = Plus / Plus

                                                                        
Query: 311  cgccatgttgacatcattattttttataatgaggtgtttgttccagcagtcaagcctttc 370
            ||||||||||  ||||||| |||||| |||||||| |||||||||||||  |||||||||
Sbjct: 1588 cgccatgttggtatcattactttttacaatgaggtatttgttccagcagcgaagcctttc 1647

                                                                        
Query: 371  ctggtggcactaattccttctggtgctcatccagacaacaagaagaatcataatagccaa 430
            |||||| |||||||  | |||||| ||||||||||  |||||||||||  || | |||||
Sbjct: 1648 ctggtgtcactaatatcatctggtactcatccagaagacaagaagaatgctagtggccaa 1707

                                                                        
Query: 431  attcctggatcaccaaagtcatctccctttctcaaatctaccagatatgtccccaaagaa 490
            |||||||||||||| ||| ||||| |||||| ||||| |||||||||||||||| |||||
Sbjct: 1708 attcctggatcacccaagccatct-cctttcccaaatttaccagatatgtccccgaagaa 1766

                                                                        
Query: 491  agtctcatcttcccataatgtttatatttctcctctgcgtcaaaccaagaaggatgcatt 550
            ||| ||| | || |||||||| ||| | |||||| |||| |||||||||  ||||  | |
Sbjct: 1767 agtttcagcatctcataatgtatatgtgtctcctttgcggcaaaccaagttggatctact 1826

                                                                        
Query: 551  gctttcaccaagttcgaggagtttttatgcttgnatcggngaaagcacccatgcttatca 610
            ||| ||||||||||| |||||||||||||| || || || ||| ||||||||||||||||
Sbjct: 1827 gctgtcaccaagttccaggagtttttatgcatgcattggtgaaggcacccatgcttatca 1886

                      
Query: 611  nagctcatct 620
             ||| |||||
Sbjct: 1887 gagcccatct 1896



 Score =  198 bits (100), Expect = 2e-47
 Identities = 211/248 (85%)
 Strand = Plus / Plus

                                                                        
Query: 15   tgaagttggctgctattagaataaggaacttgtgtgaaaggcttgggcatgtggaacaga 74
            ||||||||||||||||||||||||| |||||||| |||||| ||     |||||||||||
Sbjct: 1292 tgaagttggctgctattagaataagaaacttgtgcgaaagggttcaatgtgtggaacaga 1351

                                                                        
Query: 75   cagagcgtgtgtataatatcttcaagcagattcttgatcaacagacagctttatttttta 134
            |||||||||| |||||| ||||||||||||||||||| ||||||||| | ||||||||||
Sbjct: 1352 cagagcgtgtctataatgtcttcaagcagattcttgagcaacagacaacattatttttta 1411

                                                                        
Query: 135  atcgacacattgatcagcttattctttgttccctctatggtgttgcaaaggtttcccaat 194
            || ||||||| ||||| ||||| ||||| |  || |||||||||||||||||||  ||||
Sbjct: 1412 atagacacatcgatcaacttatcctttgctgtctttatggtgttgcaaaggtttgtcaat 1471

                                                                        
Query: 195  taacgctgacgttcaaggagattgtcaataattacaaaagagaacagcaatgtatgccag 254
            ||   || || |||| ||||||  |||| |||||||||||||||   ||||| | |||||
Sbjct: 1472 tagaactcacattcagggagatactcaacaattacaaaagagaagcacaatgcaagccag 1531

                    
Query: 255  aagttttt 262
            ||||||||
Sbjct: 1532 aagttttt 1539

---

>gb|AF250050.1| Zea mays retinoblastoma related protein RBR1 (rbr1) mRNA, complete
            cds
          Length = 2952

 Score =  240 bits (121), Expect = 5e-60
 Identities = 263/310 (84%), Gaps = 1/310 (0%)
 Strand = Plus / Plus

                                                                        
Query: 311  cgccatgttgacatcattattttttataatgaggtgtttgttccagcagtcaagcctttc 370
            ||||||||||  ||||||| |||||| |||||||| |||||||||||||  |||||||||
Sbjct: 2226 cgccatgttggtatcattactttttacaatgaggtatttgttccagcagcgaagcctttc 2285

                                                                        
Query: 371  ctggtggcactaattccttctggtgctcatccagacaacaagaagaatcataatagccaa 430
            |||||| |||||||  | |||||| ||||||||||  |||||||||||  || | |||||
Sbjct: 2286 ctggtgtcactaatatcatctggtactcatccagaagacaagaagaatgctagtggccaa 2345

                                                                        
Query: 431  attcctggatcaccaaagtcatctccctttctcaaatctaccagatatgtccccaaagaa 490
            |||||||||||||| ||| ||||| |||||| ||||| |||||||||||||||| |||||
Sbjct: 2346 attcctggatcacccaagccatct-cctttcccaaatttaccagatatgtccccgaagaa 2404

                                                                        
Query: 491  agtctcatcttcccataatgtttatatttctcctctgcgtcaaaccaagaaggatgcatt 550
            ||| ||| | || |||||||| ||| | |||||| |||| |||||||||  ||||  | |
Sbjct: 2405 agtttcagcatctcataatgtatatgtgtctcctttgcggcaaaccaagttggatctact 2464

                                                                        
Query: 551  gctttcaccaagttcgaggagtttttatgcttgnatcggngaaagcacccatgcttatca 610
            ||| ||||||||||| |||||||||||||| || || || ||| ||||||||||||||||
Sbjct: 2465 gctgtcaccaagttccaggagtttttatgcatgcattggtgaaggcacccatgcttatca 2524

                      
Query: 611  nagctcatct 620
             ||| |||||
Sbjct: 2525 gagcccatct 2534



 Score =  198 bits (100), Expect = 2e-47
 Identities = 211/248 (85%)
 Strand = Plus / Plus

                                                                        
Query: 15   tgaagttggctgctattagaataaggaacttgtgtgaaaggcttgggcatgtggaacaga 74
            ||||||||||||||||||||||||| |||||||| |||||| ||     |||||||||||
Sbjct: 1930 tgaagttggctgctattagaataagaaacttgtgcgaaagggttcaatgtgtggaacaga 1989

                                                                        
Query: 75   cagagcgtgtgtataatatcttcaagcagattcttgatcaacagacagctttatttttta 134
            |||||||||| |||||| ||||||||||||||||||| ||||||||| | ||||||||||
Sbjct: 1990 cagagcgtgtctataatgtcttcaagcagattcttgagcaacagacaacattatttttta 2049

                                                                        
Query: 135  atcgacacattgatcagcttattctttgttccctctatggtgttgcaaaggtttcccaat 194
            || ||||||| ||||| ||||| ||||| |  || |||||||||||||||||||  ||||
Sbjct: 2050 atagacacatcgatcaacttatcctttgctgtctttatggtgttgcaaaggtttgtcaat 2109

                                                                        
Query: 195  taacgctgacgttcaaggagattgtcaataattacaaaagagaacagcaatgtatgccag 254
            ||   || || |||| ||||||  |||| |||||||||||||||   ||||| | |||||
Sbjct: 2110 tagaactcacattcagggagatactcaacaattacaaaagagaagcacaatgcaagccag 2169

                    
Query: 255  aagttttt 262
            ||||||||
Sbjct: 2170 aagttttt 2177

---

>gb|AF007793.1|AF007793 Zea mays retinoblastoma-related protein 1 (RRB1) mRNA, complete cds
          Length = 4367

 Score =  240 bits (121), Expect = 5e-60
 Identities = 263/310 (84%), Gaps = 1/310 (0%)
 Strand = Plus / Plus

                                                                        
Query: 311  cgccatgttgacatcattattttttataatgaggtgtttgttccagcagtcaagcctttc 370
            ||||||||||  ||||||| |||||| |||||||| |||||||||||||  |||||||||
Sbjct: 2206 cgccatgttggtatcattactttttacaatgaggtatttgttccagcagcgaagcctttc 2265

                                                                        
Query: 371  ctggtggcactaattccttctggtgctcatccagacaacaagaagaatcataatagccaa 430
            |||||| |||||||  | |||||| ||||||||||  |||||||||||  || | |||||
Sbjct: 2266 ctggtgtcactaatatcatctggtactcatccagaagacaagaagaatgctagtggccaa 2325

                                                                        
Query: 431  attcctggatcaccaaagtcatctccctttctcaaatctaccagatatgtccccaaagaa 490
            |||||||||||||| ||| ||||| |||||| ||||| |||||||||||||||| |||||
Sbjct: 2326 attcctggatcacccaagccatct-cctttcccaaatttaccagatatgtccccgaagaa 2384

                                                                        
Query: 491  agtctcatcttcccataatgtttatatttctcctctgcgtcaaaccaagaaggatgcatt 550
            ||| ||| | || |||||||| ||| | |||||| |||| |||||||||  ||||  | |
Sbjct: 2385 agtttcagcatctcataatgtatatgtgtctcctttgcggcaaaccaagttggatctact 2444

                                                                        
Query: 551  gctttcaccaagttcgaggagtttttatgcttgnatcggngaaagcacccatgcttatca 610
            ||| ||||||||||| |||||||||||||| || || || ||| ||||||||||||||||
Sbjct: 2445 gctgtcaccaagttccaggagtttttatgcatgcattggtgaaggcacccatgcttatca 2504

                      
Query: 611  nagctcatct 620
             ||| |||||
Sbjct: 2505 gagcccatct 2514



 Score =  198 bits (100), Expect = 2e-47
 Identities = 211/248 (85%)
 Strand = Plus / Plus

                                                                        
Query: 15   tgaagttggctgctattagaataaggaacttgtgtgaaaggcttgggcatgtggaacaga 74
            ||||||||||||||||||||||||| |||||||| |||||| ||     |||||||||||
Sbjct: 1910 tgaagttggctgctattagaataagaaacttgtgcgaaagggttcaatgtgtggaacaga 1969

                                                                        
Query: 75   cagagcgtgtgtataatatcttcaagcagattcttgatcaacagacagctttatttttta 134
            |||||||||| |||||| ||||||||||||||||||| ||||||||| | ||||||||||
Sbjct: 1970 cagagcgtgtctataatgtcttcaagcagattcttgagcaacagacaacattatttttta 2029

                                                                        
Query: 135  atcgacacattgatcagcttattctttgttccctctatggtgttgcaaaggtttcccaat 194
            || ||||||| ||||| ||||| ||||| |  || |||||||||||||||||||  ||||
Sbjct: 2030 atagacacatcgatcaacttatcctttgctgtctttatggtgttgcaaaggtttgtcaat 2089

                                                                        
Query: 195  taacgctgacgttcaaggagattgtcaataattacaaaagagaacagcaatgtatgccag 254
            ||   || || |||| ||||||  |||| |||||||||||||||   ||||| | |||||
Sbjct: 2090 tagaactcacattcagggagatactcaacaattacaaaagagaagcacaatgcaagccag 2149

                    
Query: 255  aagttttt 262
            ||||||||
Sbjct: 2150 aagttttt 2157

---

>gb|BT016548.1| Zea mays clone Contig381 mRNA sequence
          Length = 1088

 Score =  232 bits (117), Expect = 1e-57
 Identities = 262/310 (84%), Gaps = 1/310 (0%)
 Strand = Plus / Plus

                                                                       
Query: 311 cgccatgttgacatcattattttttataatgaggtgtttgttccagcagtcaagcctttc 370
           ||||||||||  ||||||| |||||| |||||||| |||||||||||||  |||||||||
Sbjct: 107 cgccatgttggtatcattactttttacaatgaggtatttgttccagcagcgaagcctttc 166

                                                                       
Query: 371 ctggtggcactaattccttctggtgctcatccagacaacaagaagaatcataatagccaa 430
           |||||| |||||||  | |||||| ||||||||||  |||||||||||  || | |||||
Sbjct: 167 ctggtgtcactaatatcatctggtactcatccagaagacaagaagaatgctagtggccaa 226

                                                                       
Query: 431 attcctggatcaccaaagtcatctccctttctcaaatctaccagatatgtccccaaagaa 490
           |||||||||||||| ||  ||||||| |||| ||||| |||||||||||||||| |||||
Sbjct: 227 attcctggatcacccaacccatctcc-tttcccaaatttaccagatatgtccccgaagaa 285

                                                                       
Query: 491 agtctcatcttcccataatgtttatatttctcctctgcgtcaaaccaagaaggatgcatt 550
           ||| ||| | || |||||||| ||| | |||||| |||| |||||||||  ||||  | |
Sbjct: 286 agtttcagcatctcataatgtatatgtgtctcctttgcggcaaaccaagttggatctact 345

                                                                       
Query: 551 gctttcaccaagttcgaggagtttttatgcttgnatcggngaaagcacccatgcttatca 610
           ||| ||||||||||| |||||||||||||| || || || ||| ||||||||||||||||
Sbjct: 346 gctgtcaccaagttccaggagtttttatgcatgcattggtgaaggcacccatgcttatca 405

                     
Query: 611 nagctcatct 620
            ||| |||||
Sbjct: 406 gagcccatct 415



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 210 aggagattgtcaataattacaaaagagaacagcaatgtatgccagaagttttt 262
           |||||||  |||| |||||||||||||||   ||||| | |||||||||||||
Sbjct: 6   aggagatactcaacaattacaaaagagaagcacaatgcaagccagaagttttt 58

---

>gb|U52099.2|ZMU52099 Zea mays retinoblastoma-like protein (ZmRB) mRNA, partial cds
          Length = 1841

 Score =  232 bits (117), Expect = 1e-57
 Identities = 262/310 (84%), Gaps = 1/310 (0%)
 Strand = Plus / Plus

                                                                        
Query: 311  cgccatgttgacatcattattttttataatgaggtgtttgttccagcagtcaagcctttc 370
            ||||||||||  ||||||| |||||| |||||||| |||||||||||||  |||||||||
Sbjct: 1092 cgccatgttggtatcattactttttacaatgaggtatttgttccagcagcgaagcctttc 1151

                                                                        
Query: 371  ctggtggcactaattccttctggtgctcatccagacaacaagaagaatcataatagccaa 430
            |||||| |||||||  | |||||| ||||||||||  |||||||||||  || | | |||
Sbjct: 1152 ctggtgtcactaatatcatctggtactcatccagaagacaagaagaatgctagtgggcaa 1211

                                                                        
Query: 431  attcctggatcaccaaagtcatctccctttctcaaatctaccagatatgtccccaaagaa 490
            |||||||||||||| ||| ||||||| |||| ||||| |||||||||||||||| |||||
Sbjct: 1212 attcctggatcacccaagccatctcc-tttcccaaatttaccagatatgtccccgaagaa 1270

                                                                        
Query: 491  agtctcatcttcccataatgtttatatttctcctctgcgtcaaaccaagaaggatgcatt 550
            ||| ||| | || |||||||| ||| | |||||| |||| |||||||||  ||||  | |
Sbjct: 1271 agtttcagcatctcataatgtatatgtgtctcctttgcggcaaaccaagttggatctact 1330

                                                                        
Query: 551  gctttcaccaagttcgaggagtttttatgcttgnatcggngaaagcacccatgcttatca 610
            ||| ||||||||||| |||||||||||||| || || || ||| ||||||||||||||||
Sbjct: 1331 gctgtcaccaagttccaggagtttttatgcatgcattggtgaaggcacccatgcttatca 1390

                      
Query: 611  nagctcatct 620
             ||| |||||
Sbjct: 1391 gagcccatct 1400



 Score =  182 bits (92), Expect = 9e-43
 Identities = 209/248 (84%)
 Strand = Plus / Plus

                                                                        
Query: 15   tgaagttggctgctattagaataaggaacttgtgtgaaaggcttgggcatgtggaacaga 74
            |||||||  |||||||||||||||| |||||||| |||||| ||     |||||||||||
Sbjct: 796  tgaagttccctgctattagaataagaaacttgtgcgaaagggttcaatgtgtggaacaga 855

                                                                        
Query: 75   cagagcgtgtgtataatatcttcaagcagattcttgatcaacagacagctttatttttta 134
            |||||||||| |||||| ||||||||||||||||||| ||||||||| | ||||||||||
Sbjct: 856  cagagcgtgtctataatgtcttcaagcagattcttgagcaacagacaacattatttttta 915

                                                                        
Query: 135  atcgacacattgatcagcttattctttgttccctctatggtgttgcaaaggtttcccaat 194
            || ||||||| ||||| ||||| ||||| |  || |||||||||||||||||||  ||||
Sbjct: 916  atagacacatcgatcaacttatcctttgctgtctttatggtgttgcaaaggtttgtcaat 975

                                                                        
Query: 195  taacgctgacgttcaaggagattgtcaataattacaaaagagaacagcaatgtatgccag 254
            ||   || || |||| ||||||  |||| |||||||||||||||   ||||| | |||||
Sbjct: 976  tagaactcacattcagggagatactcaacaattacaaaagagaagcacaatgcaagccag 1035

                    
Query: 255  aagttttt 262
            ||||||||
Sbjct: 1036 aagttttt 1043

---

>emb|AJ279062.2|ZMA279062 Zea mays rbr2 gene for retinoblastoma-related protein, exons 1-16
          Length = 8716

 Score =  190 bits (96), Expect = 4e-45
 Identities = 153/172 (88%)
 Strand = Plus / Plus

                                                                        
Query: 15   tgaagttggctgctattagaataaggaacttgtgtgaaaggcttgggcatgtggaacaga 74
            ||||||| ||||||||||||||||| ||||||||||||||| ||    || |||||||||
Sbjct: 5305 tgaagttagctgctattagaataagaaacttgtgtgaaaggattcaatatatggaacaga 5364

                                                                        
Query: 75   cagagcgtgtgtataatatcttcaagcagattcttgatcaacagacagctttatttttta 134
            |||||||||| |||||| ||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 5365 cagagcgtgtctataatgtcttcaagcagattcttgatcaacagacaacattatttttta 5424

                                                                
Query: 135  atcgacacattgatcagcttattctttgttccctctatggtgttgcaaaggt 186
            || ||||||| ||||| ||||||||||| |  || |||||||||||||||||
Sbjct: 5425 atagacacatcgatcaacttattctttgctgtctttatggtgttgcaaaggt 5476



 Score =  111 bits (56), Expect = 3e-21
 Identities = 98/112 (87%)
 Strand = Plus / Plus

                                                                        
Query: 307  atcacgccatgttgacatcattattttttataatgaggtgtttgttccagcagtcaagcc 366
            ||||||||||||||| ||||||| |||||| |||||||| ||||||||||||| ||||||
Sbjct: 5778 atcacgccatgttgatatcattactttttacaatgaggtctttgttccagcagccaagcc 5837

                                                                
Query: 367  tttcctggtggcactaattccttctggtgctcatccagacaacaagaagaat 418
            |||||||||| || ||||  | |||||| ||| ||||||  |||||||||||
Sbjct: 5838 tttcctggtgtcattaatatcatctggtactcgtccagaagacaagaagaat 5889



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 99/114 (86%), Gaps = 1/114 (0%)
 Strand = Plus / Plus

                                                                        
Query: 426  gccaaattcctggatcaccaaagtcatctccctttctcaaatctaccagatatgtcccca 485
            ||||| ||||||||||||| |||  |||||| |||| ||||| |||||||||||||||||
Sbjct: 5976 gccaagttcctggatcaccgaagctatctcc-tttcccaaatttaccagatatgtcccca 6034

                                                                  
Query: 486  aagaaagtctcatcttcccataatgtttatatttctcctctgcgtcaaaccaag 539
            |||||||| ||| |||| |||||||| ||| | |||||| |||| |||||||||
Sbjct: 6035 aagaaagtttcagcttctcataatgtatatgtgtctcctttgcggcaaaccaag 6088



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 69/79 (87%)
 Strand = Plus / Plus

                                                                        
Query: 550  tgctttcaccaagttcgaggagtttttatgcttgnatcggngaaagcacccatgcttatc 609
            |||| ||||||||||| |||||||||||||| || || || ||| |||||||||||||||
Sbjct: 6656 tgctgtcaccaagttccaggagtttttatgcatgcattggtgaaggcacccatgcttatc 6715

                               
Query: 610  anagctcatctgaagattt 628
            | ||| ||||| |||||||
Sbjct: 6716 agagcccatctaaagattt 6734

---

>gb|AY109777.1| Zea mays CL1187_-3 mRNA sequence
          Length = 2920

 Score =  176 bits (89), Expect = 6e-41
 Identities = 220/264 (83%), Gaps = 1/264 (0%)
 Strand = Plus / Plus

                                                                        
Query: 307  atcacgccatgttgacatcattattttttataatgaggtgtttgttccagcagtcaagcc 366
            ||||||||||||||| |||||||      | |||||||| ||||||||||||| ||||||
Sbjct: 767  atcacgccatgttgatatcattacnnnnnacaatgaggtctttgttccagcagccaagcc 826

                                                                        
Query: 367  tttcctggtggcactaattccttctggtgctcatccagacaacaagaagaatcataatag 426
            |||||||||| || ||||  | |||||| ||| ||||||  |||||||||||  || | |
Sbjct: 827  tttcctggtgtcattaatatcatctggtactcgtccagaagacaagaagaatgctagtgg 886

                                                                        
Query: 427  ccaaattcctggatcaccaaagtcatctccctttctcaaatctaccagatatgtccccaa 486
            |||| ||||||||||||| |||  |||| |||||| ||||| ||||||||||||||||||
Sbjct: 887  ccaagttcctggatcaccgaagctatct-cctttcccaaatttaccagatatgtccccaa 945

                                                                        
Query: 487  agaaagtctcatcttcccataatgtttatatttctcctctgcgtcaaaccaagaaggatg 546
            ||||||| ||| |||| |||||||| ||| | |||||| |||| |||||||||| |||| 
Sbjct: 946  agaaagtttcagcttctcataatgtatatgtgtctcctttgcggcaaaccaagatggatt 1005

                                    
Query: 547  cattgctttcaccaagttcgagga 570
             | |||| ||||||||||| ||||
Sbjct: 1006 tactgctgtcaccaagttccagga 1029



 Score =  159 bits (80), Expect = 1e-35
 Identities = 155/182 (85%)
 Strand = Plus / Plus

                                                                       
Query: 15  tgaagttggctgctattagaataaggaacttgtgtgaaaggcttgggcatgtggaacaga 74
           ||||||| ||||||||||||||||| ||||||||||||||| ||    || |||||||||
Sbjct: 475 tgaagttagctgctattagaataagaaacttgtgtgaaaggattcaatatatggaacaga 534

                                                                       
Query: 75  cagagcgtgtgtataatatcttcaagcagattcttgatcaacagacagctttatttttta 134
           |||||||||| |||||| ||||||||||||||||||||||||||||| | |||      |
Sbjct: 535 cagagcgtgtctataatgtcttcaagcagattcttgatcaacagacaacattannnnnna 594

                                                                       
Query: 135 atcgacacattgatcagcttattctttgttccctctatggtgttgcaaaggtttcccaat 194
           || |||||||  |||| ||||||||||| |  || ||||||||||||||||||| |||||
Sbjct: 595 atagacacatgcatcaacttattctttgctgtctttatggtgttgcaaaggtttgccaat 654

             
Query: 195 ta 196
           ||
Sbjct: 655 ta 656

---

>gb|AY109345.1| Zea mays CL1187_1 mRNA sequence
          Length = 4369

 Score =  168 bits (85), Expect = 1e-38
 Identities = 197/233 (84%), Gaps = 1/233 (0%)
 Strand = Plus / Plus

                                                                        
Query: 338  aatgaggtgtttgttccagcagtcaagcctttcctggtggcactaattccttctggtgct 397
            |||||||| |||||||||||||  ||||||||||||||| |||||||  | |||||| ||
Sbjct: 2253 aatgaggtatttgttccagcagcgaagcctttcctggtgtcactaatatcatctggtact 2312

                                                                        
Query: 398  catccagacaacaagaagaatcataatagccaaattcctggatcaccaaagtcatctccc 457
            ||||||||  |||||||||||  || | ||||||||||||||||||| ||| ||||| ||
Sbjct: 2313 catccagaagacaagaagaatgctagtggccaaattcctggatcacccaagccatct-cc 2371

                                                                        
Query: 458  tttctcaaatctaccagatatgtccccaaagaaagtctcatcttcccataatgtttatat 517
            |||| ||||| |||||||||||||||| |||||||| ||| | || |||||||| ||| |
Sbjct: 2372 tttcccaaatttaccagatatgtccccgaagaaagtttcagcatctcataatgtatatgt 2431

                                                                 
Query: 518  ttctcctctgcgtcaaaccaagaaggatgcattgctttcaccaagttcgagga 570
             |||||| |||| |||||||||  ||||  | |||| ||||||||||| ||||
Sbjct: 2432 gtctcctttgcggcaaaccaagttggatctactgctgtcaccaagttccagga 2484



 Score =  155 bits (78), Expect = 2e-34
 Identities = 186/224 (83%)
 Strand = Plus / Plus

                                                                        
Query: 15   tgaagttggctgctattagaataaggaacttgtgtgaaaggcttgggcatgtggaacaga 74
            ||||||||||||||||||||||||| |||||||| |||||| ||     |||||||||||
Sbjct: 1930 tgaagttggctgctattagaataagaaacttgtgcgaaagggttcaatgtgtggaacaga 1989

                                                                        
Query: 75   cagagcgtgtgtataatatcttcaagcagattcttgatcaacagacagctttatttttta 134
            |||||||||| |||||| ||||||||||||||||||| ||||||||| | |||      |
Sbjct: 1990 cagagcgtgtctataatgtcttcaagcagattcttgagcaacagacaacattannnnnna 2049

                                                                        
Query: 135  atcgacacattgatcagcttattctttgttccctctatggtgttgcaaaggtttcccaat 194
            || ||||||| ||||| ||||| ||||| |  || |||||||||||||||||||  ||||
Sbjct: 2050 atagacacatcgatcaacttatcctttgctgtctttatggtgttgcaaaggtttgtcaat 2109

                                                        
Query: 195  taacgctgacgttcaaggagattgtcaataattacaaaagagaa 238
            ||   || || |||| ||||||  |||| |||||||||||||||
Sbjct: 2110 tagaactcacattcagggagatactcaacaattacaaaagagaa 2153

---

>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0080I08, complete sequence
          Length = 197156

 Score =  131 bits (66), Expect = 3e-27
 Identities = 100/110 (90%), Gaps = 1/110 (0%)
 Strand = Plus / Plus

                                                                         
Query: 426   gccaaattcctggatcaccaaagtcatctccctttctcaaatctaccagatatgtcccca 485
             ||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||| 
Sbjct: 37598 gccaaattcctggatcacccaagtcatctcc-tttctcaaatttaccagatatgtccccg 37656

                                                               
Query: 486   aagaaagtctcatcttcccataatgtttatatttctcctctgcgtcaaac 535
             ||||||||||||||||| |||||||| ||| | |||||||| || |||||
Sbjct: 37657 aagaaagtctcatcttctcataatgtgtatgtctctcctctacgacaaac 37706



 Score =  125 bits (63), Expect = 2e-25
 Identities = 147/175 (84%)
 Strand = Plus / Plus

                                                                         
Query: 12    tcttgaagttggctgctattagaataaggaacttgtgtgaaaggcttgggcatgtggaac 71
             |||||||||||||||||||||||||||| ||| | |||||||||||  | ||||  || |
Sbjct: 36560 tcttgaagttggctgctattagaataagaaacctatgtgaaaggctacgacatgaagagc 36619

                                                                         
Query: 72    agacagagcgtgtgtataatatcttcaagcagattcttgatcaacagacagctttatttt 131
              ||| | | | || ||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 36620 tgactgtgagcgtctataatatctttaagcagattcttgaccaacagacagctttatttt 36679

                                                                    
Query: 132   ttaatcgacacattgatcagcttattctttgttccctctatggtgttgcaaaggt 186
             | ||  ||||| |||| ||  | |||||||| | ||||||||||||||| |||||
Sbjct: 36680 tcaacagacacgttgaccaaatcattctttgctgcctctatggtgttgccaaggt 36734



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                         
Query: 303   ttggatcacgccatgttgacatcattattttttataatgaggtgtttgttccagcagtca 362
             |||||||||| |||||||| |||||| ||||||||||| | || ||||||||  | ||||
Sbjct: 37381 ttggatcacgtcatgttgatatcattgttttttataatcaagtatttgttcccacggtca 37440

                                          
Query: 363   agcctttcctggtggcactaattccttct 391
             | ||||| |||||||| ||||| ||||||
Sbjct: 37441 aacctttgctggtggctctaatgccttct 37469



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/78 (84%)
 Strand = Plus / Plus

                                                                         
Query: 542   ggatgcattgctttcaccaagttcgaggagtttttatgcttgnatcggngaaagcaccca 601
             ||||||||||||||||||||||||  ||||||| || || || ||||| |||||||| ||
Sbjct: 37883 ggatgcattgctttcaccaagttcacggagtttctacgcgtgcatcggtgaaagcactca 37942

                               
Query: 602   tgcttatcanagctcatc 619
              |||| ||| ||| ||||
Sbjct: 37943 agcttttcagagcccatc 37960



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 94/115 (81%)
 Strand = Plus / Plus

                                                                         
Query: 183   aggtttcccaattaacgctgacgttcaaggagattgtcaataattacaaaagagaacagc 242
             ||||||| |||||| |  |||||||||||||||| ||||| ||||| || || || |  |
Sbjct: 37145 aggtttctcaattatcattgacgttcaaggagatcgtcaacaattataagagggagccac 37204

                                                                    
Query: 243   aatgtatgccagaagtttttagaagcgtctttgttgtgaatacagatcacaatgg 297
             ||||||  ||||||||||| |||||  ||||||||| || |||| ||| ||||||
Sbjct: 37205 aatgtaaaccagaagttttcagaagtatctttgttgggagtacaaatcgcaatgg 37259

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  131 bits (66), Expect = 3e-27
 Identities = 100/110 (90%), Gaps = 1/110 (0%)
 Strand = Plus / Plus

                                                                            
Query: 426      gccaaattcctggatcaccaaagtcatctccctttctcaaatctaccagatatgtcccca 485
                ||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||| 
Sbjct: 18772331 gccaaattcctggatcacccaagtcatctcc-tttctcaaatttaccagatatgtccccg 18772389

                                                                  
Query: 486      aagaaagtctcatcttcccataatgtttatatttctcctctgcgtcaaac 535
                ||||||||||||||||| |||||||| ||| | |||||||| || |||||
Sbjct: 18772390 aagaaagtctcatcttctcataatgtgtatgtctctcctctacgacaaac 18772439



 Score =  125 bits (63), Expect = 2e-25
 Identities = 147/175 (84%)
 Strand = Plus / Plus

                                                                            
Query: 12       tcttgaagttggctgctattagaataaggaacttgtgtgaaaggcttgggcatgtggaac 71
                |||||||||||||||||||||||||||| ||| | |||||||||||  | ||||  || |
Sbjct: 18771293 tcttgaagttggctgctattagaataagaaacctatgtgaaaggctacgacatgaagagc 18771352

                                                                            
Query: 72       agacagagcgtgtgtataatatcttcaagcagattcttgatcaacagacagctttatttt 131
                 ||| | | | || ||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 18771353 tgactgtgagcgtctataatatctttaagcagattcttgaccaacagacagctttatttt 18771412

                                                                       
Query: 132      ttaatcgacacattgatcagcttattctttgttccctctatggtgttgcaaaggt 186
                | ||  ||||| |||| ||  | |||||||| | ||||||||||||||| |||||
Sbjct: 18771413 tcaacagacacgttgaccaaatcattctttgctgcctctatggtgttgccaaggt 18771467



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                            
Query: 303      ttggatcacgccatgttgacatcattattttttataatgaggtgtttgttccagcagtca 362
                |||||||||| |||||||| |||||| ||||||||||| | || ||||||||  | ||||
Sbjct: 18772114 ttggatcacgtcatgttgatatcattgttttttataatcaagtatttgttcccacggtca 18772173

                                             
Query: 363      agcctttcctggtggcactaattccttct 391
                | ||||| |||||||| ||||| ||||||
Sbjct: 18772174 aacctttgctggtggctctaatgccttct 18772202



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/78 (84%)
 Strand = Plus / Plus

                                                                            
Query: 542      ggatgcattgctttcaccaagttcgaggagtttttatgcttgnatcggngaaagcaccca 601
                ||||||||||||||||||||||||  ||||||| || || || ||||| |||||||| ||
Sbjct: 18772616 ggatgcattgctttcaccaagttcacggagtttctacgcgtgcatcggtgaaagcactca 18772675

                                  
Query: 602      tgcttatcanagctcatc 619
                 |||| ||| ||| ||||
Sbjct: 18772676 agcttttcagagcccatc 18772693



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 94/115 (81%)
 Strand = Plus / Plus

                                                                            
Query: 183      aggtttcccaattaacgctgacgttcaaggagattgtcaataattacaaaagagaacagc 242
                ||||||| |||||| |  |||||||||||||||| ||||| ||||| || || || |  |
Sbjct: 18771878 aggtttctcaattatcattgacgttcaaggagatcgtcaacaattataagagggagccac 18771937

                                                                       
Query: 243      aatgtatgccagaagtttttagaagcgtctttgttgtgaatacagatcacaatgg 297
                ||||||  ||||||||||| |||||  ||||||||| || |||| ||| ||||||
Sbjct: 18771938 aatgtaaaccagaagttttcagaagtatctttgttgggagtacaaatcgcaatgg 18771992

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  131 bits (66), Expect = 3e-27
 Identities = 100/110 (90%), Gaps = 1/110 (0%)
 Strand = Plus / Plus

                                                                            
Query: 426      gccaaattcctggatcaccaaagtcatctccctttctcaaatctaccagatatgtcccca 485
                ||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||| 
Sbjct: 18932404 gccaaattcctggatcacccaagtcatctcc-tttctcaaatttaccagatatgtccccg 18932462

                                                                  
Query: 486      aagaaagtctcatcttcccataatgtttatatttctcctctgcgtcaaac 535
                ||||||||||||||||| |||||||| ||| | |||||||| || |||||
Sbjct: 18932463 aagaaagtctcatcttctcataatgtgtatgtctctcctctacgacaaac 18932512



 Score =  125 bits (63), Expect = 2e-25
 Identities = 147/175 (84%)
 Strand = Plus / Plus

                                                                            
Query: 12       tcttgaagttggctgctattagaataaggaacttgtgtgaaaggcttgggcatgtggaac 71
                |||||||||||||||||||||||||||| ||| | |||||||||||  | ||||  || |
Sbjct: 18931366 tcttgaagttggctgctattagaataagaaacctatgtgaaaggctacgacatgaagagc 18931425

                                                                            
Query: 72       agacagagcgtgtgtataatatcttcaagcagattcttgatcaacagacagctttatttt 131
                 ||| | | | || ||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 18931426 tgactgtgagcgtctataatatctttaagcagattcttgaccaacagacagctttatttt 18931485

                                                                       
Query: 132      ttaatcgacacattgatcagcttattctttgttccctctatggtgttgcaaaggt 186
                | ||  ||||| |||| ||  | |||||||| | ||||||||||||||| |||||
Sbjct: 18931486 tcaacagacacgttgaccaaatcattctttgctgcctctatggtgttgccaaggt 18931540



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                            
Query: 303      ttggatcacgccatgttgacatcattattttttataatgaggtgtttgttccagcagtca 362
                |||||||||| |||||||| |||||| ||||||||||| | || ||||||||  | ||||
Sbjct: 18932187 ttggatcacgtcatgttgatatcattgttttttataatcaagtatttgttcccacggtca 18932246

                                             
Query: 363      agcctttcctggtggcactaattccttct 391
                | ||||| |||||||| ||||| ||||||
Sbjct: 18932247 aacctttgctggtggctctaatgccttct 18932275



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/78 (84%)
 Strand = Plus / Plus

                                                                            
Query: 542      ggatgcattgctttcaccaagttcgaggagtttttatgcttgnatcggngaaagcaccca 601
                ||||||||||||||||||||||||  ||||||| || || || ||||| |||||||| ||
Sbjct: 18932689 ggatgcattgctttcaccaagttcacggagtttctacgcgtgcatcggtgaaagcactca 18932748

                                  
Query: 602      tgcttatcanagctcatc 619
                 |||| ||| ||| ||||
Sbjct: 18932749 agcttttcagagcccatc 18932766



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 94/115 (81%)
 Strand = Plus / Plus

                                                                            
Query: 183      aggtttcccaattaacgctgacgttcaaggagattgtcaataattacaaaagagaacagc 242
                ||||||| |||||| |  |||||||||||||||| ||||| ||||| || || || |  |
Sbjct: 18931951 aggtttctcaattatcattgacgttcaaggagatcgtcaacaattataagagggagccac 18932010

                                                                       
Query: 243      aatgtatgccagaagtttttagaagcgtctttgttgtgaatacagatcacaatgg 297
                ||||||  ||||||||||| |||||  ||||||||| || |||| ||| ||||||
Sbjct: 18932011 aatgtaaaccagaagttttcagaagtatctttgttgggagtacaaatcgcaatgg 18932065

---

>gb|AY117036.1| Cocos nucifera retinoblastoma-like protein (Rb1) mRNA, complete cds
          Length = 3699

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 130/159 (81%)
 Strand = Plus / Plus

                                                                        
Query: 456  cctttctcaaatctaccagatatgtccccaaagaaagtctcatcttcccataatgtttat 515
            |||||| ||||||| ||||||||||| ||||||||||| ||  || | |||||||| |||
Sbjct: 3039 cctttcccaaatcttccagatatgtcaccaaagaaagtttctgctgctcataatgtatat 3098

                                                                        
Query: 516  atttctcctctgcgtcaaaccaagaaggatgcattgctttcaccaagttcgaggagtttt 575
             |||||||| ||||   | | |||| ||||||||||||||||||||| || | ||| | |
Sbjct: 3099 gtttctcctttgcgatcatcaaagatggatgcattgctttcaccaagctccaagagctat 3158

                                                   
Query: 576  tatgcttgnatcggngaaagcacccatgcttatcanagc 614
            ||||||||  | || || ||||| ||||||||||| |||
Sbjct: 3159 tatgcttgtgttggcgagagcactcatgcttatcagagc 3197



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                     
Query: 17   aagttggctgctattagaataaggaacttgtgtgaaaggct 57
            |||||||||||||||||||| || | ||| |||||||||||
Sbjct: 2574 aagttggctgctattagaatcagaagcttatgtgaaaggct 2614



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 126  tattttttaatcgacacattgatca 150
            |||||||||||||||| ||||||||
Sbjct: 2686 tattttttaatcgacatattgatca 2710

---

>gb|AC118708.4| Mus musculus chromosome 7, clone RP24-118K11, complete sequence
          Length = 212638

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 159    tttgttccctctatggtgttgcaaa 183
              |||||||| ||||||||||||||||
Sbjct: 195130 tttgttccttctatggtgttgcaaa 195106

---

>gb|BC083369.1| Danio rerio zgc:103420, mRNA (cDNA clone MGC:103420 IMAGE:7233261),
            complete cds
          Length = 1407

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 122  gctttattttttaatcgacac 142
            |||||||||||||||||||||
Sbjct: 1051 gctttattttttaatcgacac 1071

---

>gb|AC146174.2| Pan troglodytes BAC clone CH251-549F12 from Y, complete sequence
          Length = 191823

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 353    ccagcagtcaagcctttcctg 373
              |||||||||||||||||||||
Sbjct: 121997 ccagcagtcaagcctttcctg 122017

---

>emb|BX927257.11| Zebrafish DNA sequence from clone CH211-122I22 in linkage group 6,
             complete sequence
          Length = 133388

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 122   gctttattttttaatcgacac 142
             |||||||||||||||||||||
Sbjct: 17210 gctttattttttaatcgacac 17230

---

>emb|AL844222.19| Mouse DNA sequence from clone RP23-44P13 on chromosome 4, complete
              sequence
          Length = 238429

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 222    ataattacaaaagagaacagcaatg 246
              ||||||||| |||||||||||||||
Sbjct: 172802 ataattacagaagagaacagcaatg 172826

---

>emb|AL591708.10| Human DNA sequence from clone RP13-634N5 on chromosome Xq21.1-21.22,
             complete sequence
          Length = 93667

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 326   attattttttataatgaggtgtttg 350
             |||||||||||||||||| ||||||
Sbjct: 69089 attattttttataatgagttgtttg 69065

---

>emb|AL390788.15| Human DNA sequence from clone RP11-384P5 on chromosome 9, complete
             sequence
          Length = 136968

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 209   aaggagattgtcaataattacaaaa 233
             |||||||||||||||| ||||||||
Sbjct: 82353 aaggagattgtcaatacttacaaaa 82329

---

>emb|AL139156.11| Human DNA sequence from clone RP4-800M22 on chromosome 1p32.3-34.1
              Contains the 5' end of the MADHIP gene for mothers against
              decapentaplegic (MAD) homolog (Drosophila) interacting
              protein receptor activation anchor, a pseudogene similar to
              part of alcohol dehydrogenase 5 (class III) chi
              polypeptidem (ADH5), a transformer-2 alpha (TRA2A)
              pseudogene, a IAP-associated factor VIAF1 (VIAF1)
              pseudogene, a pseudogene similar to part of ribosomal
              protein L9 (RPL9), the 3' end of the gene for a novel
              protein similar to RNA polymerase B transcription factor 3
              (MGC23908) and a CpG island, complete sequence
          Length = 138985

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 500    ttcccataatgtttatatttc 520
              |||||||||||||||||||||
Sbjct: 132084 ttcccataatgtttatatttc 132064

---

>dbj|BS000614.1| Pan troglodytes chromosome Y clone:PTBY-009K01, complete sequences
          Length = 63466

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 353   ccagcagtcaagcctttcctg 373
             |||||||||||||||||||||
Sbjct: 32968 ccagcagtcaagcctttcctg 32948

---

>dbj|BS000556.1| Pan troglodytes chromosome Y clone:PTB-461C11, complete sequences
          Length = 148964

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 353    ccagcagtcaagcctttcctg 373
              |||||||||||||||||||||
Sbjct: 127604 ccagcagtcaagcctttcctg 127584

---

>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 353      ccagcagtcaagcctttcctg 373
                |||||||||||||||||||||
Sbjct: 23756832 ccagcagtcaagcctttcctg 23756852

---

>gb|AC006040.3|AC006040 Homo sapiens BAC clone RP11-400O10 from Y, complete sequence
          Length = 186504

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 353    ccagcagtcaagcctttcctg 373
              |||||||||||||||||||||
Sbjct: 114955 ccagcagtcaagcctttcctg 114935

---

>emb|BX932701.1| Gallus gallus finished cDNA, clone ChEST493k13
          Length = 625

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 238 acagcaatgtatgccagaagttttt 262
           ||||||||||| |||||||||||||
Sbjct: 376 acagcaatgtaagccagaagttttt 352

---

>gb|AC105754.3| Homo sapiens chromosome 1 clone RP4-814E15, complete sequence
          Length = 133799

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 500   ttcccataatgtttatatttc 520
             |||||||||||||||||||||
Sbjct: 35446 ttcccataatgtttatatttc 35426

---

>ref|NM_001006043.1| Danio rerio zgc:103420 (zgc:103420), mRNA
          Length = 1407

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 122  gctttattttttaatcgacac 142
            |||||||||||||||||||||
Sbjct: 1051 gctttattttttaatcgacac 1071

---

>gb|AF230739.1|AF230739 Euphorbia esula retinoblastoma-like protein mRNA, partial cds
          Length = 2625

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                         
Query: 471  ccagatatgtccccaaagaaagtctcatcttcccataatgtttat 515
            ||||||||||||||||| ||||| ||  | || ||||||||||||
Sbjct: 2071 ccagatatgtccccaaaaaaagtttctgcatcacataatgtttat 2115

---

>gb|AC119196.12| Mus musculus chromosome 7, clone RP24-179I13, complete sequence
          Length = 165611

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 159    tttgttccctctatggtgttgcaaa 183
              |||||||| ||||||||||||||||
Sbjct: 145480 tttgttccttctatggtgttgcaaa 145504

---

>gb|AF041427.1|AF041427 Homo sapiens ribosomal protein s4 Y isoform gene, complete cds
          Length = 45859

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 353   ccagcagtcaagcctttcctg 373
             |||||||||||||||||||||
Sbjct: 17228 ccagcagtcaagcctttcctg 17208

---

>gb|AY832292.1| Platanus occidentalis ribosomal protein S4 (rps4) gene, partial
           cds; mitochondrial
          Length = 961

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 420 ataatagccaaattcctggatcacc 444
           ||||||| |||||||||||||||||
Sbjct: 486 ataataggcaaattcctggatcacc 510

---

>gb|AY832286.1| Calycanthus floridus ribosomal protein S4 (rps4) gene, partial cds;
           mitochondrial
          Length = 959

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 420 ataatagccaaattcctggatcacc 444
           ||||||| |||||||||||||||||
Sbjct: 486 ataataggcaaattcctggatcacc 510

---

>dbj|AB071771.1| Capsicum annuum rps4 gene for ribosomal protein S4, partial cds
          Length = 393

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 420 ataatagccaaattcctggatcacc 444
           ||||||| |||||||||||||||||
Sbjct: 22  ataataggcaaattcctggatcacc 46

---

>gb|AC139130.10| Mus musculus chromosome 15, clone RP23-210B16, complete sequence
          Length = 198154

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 221    aataattacaaaagagaaca 240
              ||||||||||||||||||||
Sbjct: 137493 aataattacaaaagagaaca 137512

---

>gb|AC158943.9| Mus musculus chromosome 1, clone RP24-272N10, complete sequence
          Length = 186003

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 160   ttgttccctctatggtgttgcaaa 183
             ||||||| ||||||||||||||||
Sbjct: 18765 ttgttccttctatggtgttgcaaa 18742

---

>gb|AE006267.1| Lactococcus lactis subsp. lactis IL1403 section 29 of 218 of the
            complete genome
          Length = 11510

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 263  agaagcgtctttgttgtgaa 282
            ||||||||||||||||||||
Sbjct: 7268 agaagcgtctttgttgtgaa 7287

---

>ref|XM_657666.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5154.2), mRNA
          Length = 4317

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 384  ttccttctggtgctcatcca 403
            ||||||||||||||||||||
Sbjct: 1029 ttccttctggtgctcatcca 1010

---

>gb|AC166939.2| Mus musculus BAC clone RP23-72K19 from chromosome 8, complete sequence
          Length = 236510

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 160    ttgttccctctatggtgttgcaaa 183
              ||||||||||||||| ||||||||
Sbjct: 141272 ttgttccctctatggggttgcaaa 141249

---

>gb|AC124529.3| Mus musculus BAC clone RP23-411I8 from chromosome 3, complete sequence
          Length = 192341

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 333    tttataatgaggtgtttgtt 352
              ||||||||||||||||||||
Sbjct: 117970 tttataatgaggtgtttgtt 117951

---

>gb|AC122890.4| Mus musculus BAC clone RP23-63O14 from 8, complete sequence
          Length = 209359

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 160  ttgttccctctatggtgttgcaaa 183
            ||||||||||||||| ||||||||
Sbjct: 3665 ttgttccctctatggggttgcaaa 3642

---

>ref|XM_661829.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.40492)
            partial mRNA
          Length = 1743

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   agcagattcttgatcaacag 118
            ||||||||||||||||||||
Sbjct: 1680 agcagattcttgatcaacag 1661

---

>gb|AC146745.20| Medicago truncatula clone mth2-53p19, complete sequence
          Length = 121952

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 312   gccatgttgacatcattatt 331
             ||||||||||||||||||||
Sbjct: 92244 gccatgttgacatcattatt 92263

---

>gb|AC149637.11| Medicago truncatula clone mth2-181h2, complete sequence
          Length = 116616

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 312   gccatgttgacatcattatt 331
             ||||||||||||||||||||
Sbjct: 13745 gccatgttgacatcattatt 13764

---

>emb|AL442224.17| Human DNA sequence from clone RP11-53B5 on chromosome 9 Contains a
             novel gene, complete sequence
          Length = 102957

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 123   ctttattttttaatcgacacattg 146
             |||||||||||||| |||||||||
Sbjct: 88247 ctttattttttaattgacacattg 88270

---

>emb|AL022329.9|HS407F11 Human DNA sequence from clone CTA-407F11 on chromosome 22q12 Contains
              ADRBK2 gene for adrenergic beta receptor kinase 2, the YESP
              (v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1)
              pseudogene, ESTs, a ca repeat polymorphism, genomic marker
              D22S421, STSs, GSSs and two putative CpG Islands, complete
              sequence
          Length = 221507

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 123    ctttattttttaatcgacacattg 146
              |||||||||||||| |||||||||
Sbjct: 135818 ctttattttttaattgacacattg 135795

---

>gb|AC104890.16| Mus musculus chromosome 1, clone RP23-260J11, complete sequence
          Length = 211081

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 160    ttgttccctctatggtgttgcaaa 183
              ||||||| ||||||||||||||||
Sbjct: 123583 ttgttccttctatggtgttgcaaa 123560

---

>gb|AC151726.31| Medicago truncatula clone mth2-22e22, complete sequence
          Length = 127018

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 312   gccatgttgacatcattatt 331
             ||||||||||||||||||||
Sbjct: 87495 gccatgttgacatcattatt 87476

---

>gb|AC159537.24| Medicago truncatula clone mth2-188k3, complete sequence
          Length = 119507

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 312    gccatgttgacatcattatt 331
              ||||||||||||||||||||
Sbjct: 110328 gccatgttgacatcattatt 110347

---

>gb|AC169120.12| Medicago truncatula clone mth2-84o2, complete sequence
          Length = 118165

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 312   gccatgttgacatcattatt 331
             ||||||||||||||||||||
Sbjct: 60664 gccatgttgacatcattatt 60683

---

>dbj|AK056925.1| Homo sapiens cDNA FLJ32363 fis, clone PUAEN1000081
          Length = 2441

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 485  aaagaaagtctcatcttcccataatgtt 512
            |||||||||||||||||| || ||||||
Sbjct: 1597 aaagaaagtctcatcttcacacaatgtt 1570

---

>gb|AC114310.2| Homo sapiens chromosome 5 clone RP11-285K13, complete sequence
          Length = 157366

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 485   aaagaaagtctcatcttcccataatgtt 512
             |||||||||||||||||| || ||||||
Sbjct: 41110 aaagaaagtctcatcttcacacaatgtt 41083

---

>gb|AC114956.2| Homo sapiens chromosome 5 clone RP11-159F24, complete sequence
          Length = 104726

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 485   aaagaaagtctcatcttcccataatgtt 512
             |||||||||||||||||| || ||||||
Sbjct: 19552 aaagaaagtctcatcttcacacaatgtt 19579

---

>gb|AE010151.1| Pyrococcus furiosus DSM 3638, section 26 of 173 of the complete
            genome
          Length = 10947

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 160  ttgttccctctatggtgttg 179
            ||||||||||||||||||||
Sbjct: 3515 ttgttccctctatggtgttg 3496

---

>gb|AC009475.5| Homo sapiens BAC clone RP11-285F23 from 2, complete sequence
          Length = 190349

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 123   ctttattttttaatcgacacattg 146
             |||||||||||||| |||||||||
Sbjct: 37473 ctttattttttaattgacacattg 37450

---

>ref|NM_198566.1| Homo sapiens FLJ32363 protein (FLJ32363), mRNA
          Length = 2441

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 485  aaagaaagtctcatcttcccataatgtt 512
            |||||||||||||||||| || ||||||
Sbjct: 1597 aaagaaagtctcatcttcacacaatgtt 1570

---

>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome
          Length = 3630528

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 487     agaaagtctcatcttcccataatg 510
               ||||||| ||||||||||||||||
Sbjct: 3034032 agaaagtatcatcttcccataatg 3034055

---

>gb|AF235093.1|AF235093 Homo sapiens chromosome 21 map 21q21 clone PAC P704-39J11, complete
             sequence
          Length = 161121

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 325   cattattttttataatgagg 344
             ||||||||||||||||||||
Sbjct: 56195 cattattttttataatgagg 56176

---

>dbj|BS000022.1| Pan troglodytes chromosome 22 clone:PTB-131J13, map 22, complete
             sequences
          Length = 214189

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 325   cattattttttataatgagg 344
             ||||||||||||||||||||
Sbjct: 84693 cattattttttataatgagg 84674

---

>emb|AL954362.9| Mouse DNA sequence from clone RP23-345L22 on chromosome X, complete
             sequence
          Length = 199559

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 117   agacagctttattttttaat 136
             ||||||||||||||||||||
Sbjct: 37788 agacagctttattttttaat 37769

---

>emb|AL163210.2|HS21C010 Homo sapiens chromosome 21 segment HS21C010
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 325    cattattttttataatgagg 344
              ||||||||||||||||||||
Sbjct: 259958 cattattttttataatgagg 259939

---

>gb|BC036867.1| Homo sapiens FLJ32363 protein, mRNA (cDNA clone MGC:46448
            IMAGE:5198039), complete cds
          Length = 2424

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 485  aaagaaagtctcatcttcccataatgtt 512
            |||||||||||||||||| || ||||||
Sbjct: 1545 aaagaaagtctcatcttcacacaatgtt 1518

---

>gb|AC147152.3| Mus musculus BAC clone RP24-257J19 from 3, complete sequence
          Length = 186839

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 333    tttataatgaggtgtttgtt 352
              ||||||||||||||||||||
Sbjct: 138561 tttataatgaggtgtttgtt 138580

---

>emb|AL109762.3|HSM24152 Homo sapiens chromosome 21 sequence from PAC RPCI-1 152M24 map 21q21
             region D21S189-LA297, complete sequence
          Length = 116137

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 325   cattattttttataatgagg 344
             ||||||||||||||||||||
Sbjct: 17788 cattattttttataatgagg 17769

---

>emb|AJ010598.1|HS135E14 Homo sapiens chromosome 21 PAC RPCIP704E14135Q2, complete sequence
          Length = 135855

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 325    cattattttttataatgagg 344
              ||||||||||||||||||||
Sbjct: 130599 cattattttttataatgagg 130580

---

>gb|AC151299.3| Mus musculus BAC clone RP23-11N17 from chromosome 17, complete sequence
          Length = 206555

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   cattgatcagcttattcttt 161
             ||||||||||||||||||||
Sbjct: 74602 cattgatcagcttattcttt 74583


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,713,259
Number of Sequences: 3902068
Number of extensions: 7713259
Number of successful extensions: 150462
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 150092
Number of HSP's gapped (non-prelim): 349
length of query: 628
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 605
effective length of database: 17,143,297,704
effective search space: 10371695110920
effective search space used: 10371695110920
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---