ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags27l08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YOW1_SCHPO (Q9USR9) Hypothetical protein C1861.01c in chromosome II 30 3.7

>YOW1_SCHPO (Q9USR9) Hypothetical protein C1861.01c in chromosome II|
          Length = 643

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 18/49 (36%), Positives = 29/49 (59%)
 Frame = -1

Query: 531 EPSSQFSVNPDSNEFSNASSSDMAT*GNAMENSELEKDSFRMSAKAGST 385
           +P+S  +VN  S+E S+ASSSD +     + +S L  +S  + A  GS+
Sbjct: 76  QPTSPMAVNAASDEASHASSSDSSDKNPDIPSSPLLMNSRALRASRGSS 124


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,759,754
Number of Sequences: 219361
Number of extensions: 1143135
Number of successful extensions: 3160
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3158
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4815021120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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