Clone Information

BLAST Search Result

Clone Name	bags28a01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1	39	0.013
2	SFR11_HUMAN (Q05519) Splicing factor arginine/serine-rich 11 (Ar...	37	0.029
3	SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1...	37	0.050
4	SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1	36	0.085
5	SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1...	36	0.085
6	ILVC_PHOLL (Q7MYK9) Ketol-acid reductoisomerase (EC 1.1.1.86) (A...	35	0.11
7	IF2_VIBF1 (Q5E7L5) Translation initiation factor IF-2	34	0.25
8	RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats pro...	34	0.32
9	ACCA_VIBCH (Q9KPW8) Acetyl-coenzyme A carboxylase carboxyl trans...	33	0.55
10	SGO1_CAEBR (Q60ZS1) Shugoshin	33	0.55
11	ASB16_HUMAN (Q96NS5) Ankyrin repeat and SOCS box protein 16 (ASB...	33	0.55
12	NKTR_HUMAN (P30414) NK-tumor recognition protein (Natural-killer...	33	0.72
13	IF2_PSEHT (Q3IJ53) Translation initiation factor IF-2	33	0.72
14	IF2_IDILO (Q5QTY8) Translation initiation factor IF-2	32	0.94
15	TRDN_CANFA (P82179) Triadin	32	0.94
16	CDC15_YEAST (P27636) Cell division control protein 15 (EC 2.7.11.1)	32	0.94
17	TOP2B_CHICK (O42131) DNA topoisomerase 2-beta (EC 5.99.1.3) (DNA...	32	1.2
18	ILVC_VIBF1 (Q5E1S3) Ketol-acid reductoisomerase (EC 1.1.1.86) (A...	32	1.2
19	LRC50_RAT (Q6AYH9) Leucine-rich repeat-containing protein 50	32	1.2
20	TOP2A_CRIGR (P41515) DNA topoisomerase 2-alpha (EC 5.99.1.3) (DN...	32	1.2
21	H11R_CHICK (P08288) Histone H1.11R	32	1.2
22	YR871_MIMIV (Q5UP41) Hypothetical protein R871	32	1.6
23	KI67_HUMAN (P46013) Antigen KI-67	32	1.6
24	NHR44_CAEEL (Q22555) Nuclear hormone receptor family member nhr-44	31	2.1
25	RIMS1_MOUSE (Q99NE5) Regulating synaptic membrane exocytosis pro...	31	2.1
26	TOP3_HAEIN (P43704) DNA topoisomerase 3 (EC 5.99.1.2) (DNA topoi...	31	2.1
27	YBD1_YEAST (P38200) Protein YBL031W	31	2.1
28	MBB1A_MOUSE (Q7TPV4) Myb-binding protein 1A (Myb-binding protein...	31	2.1
29	SLC31_RAT (Q64319) Neutral and basic amino acid transport protei...	31	2.1
30	DSG2_HUMAN (Q14126) Desmoglein-2 precursor (HDGC)	31	2.1
31	ACCA_VIBPA (Q87MF3) Acetyl-coenzyme A carboxylase carboxyl trans...	31	2.7
32	C90A1_ARATH (Q42569) Cytochrome P450 90A1 (EC 1.14.-.-)	31	2.7
33	SWR1_USTMA (Q4P328) Helicase SWR1 (EC 3.6.1.-)	31	2.7
34	POLG_RTSVA (Q83034) Genome polyprotein [Contains: Putative leade...	31	2.7
35	SLC31_HUMAN (Q07837) Neutral and basic amino acid transport prot...	31	2.7
36	FOSL2_MOUSE (P47930) Fos-related antigen 2	30	3.6
37	ILVC_SHEON (Q8E9D5) Ketol-acid reductoisomerase (EC 1.1.1.86) (A...	30	3.6
38	EXP9_STRR6 (P0A4D8) Probable ATP-dependent RNA helicase exp9 (EC...	30	4.6
39	EXP9_STRPN (P0A4D7) Probable ATP-dependent RNA helicase exp9 (EC...	30	4.6
40	POLG_RTSVT (Q91PP5) Genome polyprotein [Contains: Putative leade...	30	4.6
41	ILVC_VIBCH (Q9KVI4) Ketol-acid reductoisomerase (EC 1.1.1.86) (A...	30	4.6
42	RIMS1_RAT (Q9JIR4) Regulating synaptic membrane exocytosis prote...	30	4.6
43	ACCA_NEIG1 (Q5F8F5) Acetyl-coenzyme A carboxylase carboxyl trans...	30	4.6
44	ATRIP_DROME (Q9VVN4) ATR-interacting protein mus304 (Mutagen-sen...	30	4.6
45	ACCA_AZOSE (Q5P2J0) Acetyl-coenzyme A carboxylase carboxyl trans...	30	4.6
46	MAST1_MOUSE (Q9R1L5) Microtubule-associated serine/threonine-pro...	30	4.6
47	PRC1_HUMAN (O43663) Protein regulator of cytokinesis 1	30	4.6
48	AT11B_RABIT (Q9N0Z4) Probable phospholipid-transporting ATPase I...	30	6.1
49	AT11B_HUMAN (Q9Y2G3) Probable phospholipid-transporting ATPase I...	30	6.1
50	POGK_MOUSE (Q80TC5) Pogo transposable element with KRAB domain	30	6.1
51	SCYB9_MOUSE (P18340) Small inducible cytokine B9 precursor (CXCL...	29	7.9
52	NS1_IACHI (P11618) Nonstructural protein 1 (NS1) (NS1A)	29	7.9
53	GUAA_DESVH (Q72D86) GMP synthase [glutamine-hydrolyzing] (EC 6.3...	29	7.9
54	FAT_DROME (P33450) Cadherin-related tumor suppressor precursor (...	29	7.9
55	GUC2D_HUMAN (Q02846) Retinal guanylyl cyclase 1 precursor (EC 4....	29	7.9
56	ILVC_PHOPR (Q6LVZ5) Ketol-acid reductoisomerase (EC 1.1.1.86) (A...	29	7.9
57	YFH1_YEAST (P43586) Hypothetical 23.6 kDa protein in PUS3-NIC96 ...	29	7.9
58	ACCA_IDILO (Q5QZP1) Acetyl-coenzyme A carboxylase carboxyl trans...	29	7.9
59	NS1_IALE3 (P69274) Nonstructural protein 1 (NS1) (NS1A)	29	7.9
60	NS1_IALE2 (P69273) Nonstructural protein 1 (NS1) (NS1A)	29	7.9
61	NS1_IALE1 (P69272) Nonstructural protein 1 (NS1) (NS1A)	29	7.9

>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 38.5 bits (88), Expect = 0.013
 Identities = 27/105 (25%), Positives = 47/105 (44%)
 Frame = +1

Query: 205 QQRRSMPRPTGNRRAPKTPEQRRKIAEAIAAKWLDREYRERVCSAINSYHGTSSGSKVPR 384
           ++R + P P   RRA  +P+ +R+++ +   K       +R   +I+S H    GS   R
Sbjct: 604 KRRTASPPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKH--RKGSPPSR 661

Query: 385 KQRTPREPGAKREKKKSIQHRAVSLDDAHARTAPVKRKKSATPYK 519
             R  R P   +    S + RA       +   P++R  SA+P +
Sbjct: 662 SNRETRSPPQNKRDSPSPRPRA---SHTSSSPPPLRRGASASPQR 703



 Score = 30.4 bits (67), Expect = 3.6
 Identities = 24/78 (30%), Positives = 31/78 (39%)
 Frame = +1

Query: 307 DREYRERVCSAINSYHGTSSGSKVPRKQRTPREPGAKREKKKSIQHRAVSLDDAHARTAP 486
           +RE R+R      S     S S  PR++ +P     KR   +S  HR  S         P
Sbjct: 161 NREKRDRS----RSPRRRKSRSPSPRRRSSPIRRERKRSHSRSPHHRTKS-----RSATP 211

Query: 487 VKRKKSATPYKDPMAGEK 540
              KK ATP  +P    K
Sbjct: 212 APEKKEATPEPEPSVKPK 229

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>SFR11_HUMAN (Q05519) Splicing factor arginine/serine-rich 11 (Arginine-rich 54|
           kDa nuclear protein) (p54)
          Length = 484

 Score = 37.4 bits (85), Expect = 0.029
 Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 13/119 (10%)
 Frame = +1

Query: 205 QQRRSMPRPTG--NRRAPKTPEQRRKIAEAIAAKWLDREY----RERVCSAINSYHGTSS 366
           ++RRS  R  G  +R   KT +++++  E   +K   + Y    R R  S       + S
Sbjct: 291 RRRRSHSRERGRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASRERRRRRSRS 350

Query: 367 GSKVPRKQRTP-----REPGAKREK--KKSIQHRAVSLDDAHARTAPVKRKKSATPYKD 522
           G++ P+K R+P     R P  +R K  KK  + +  S D+    T+  K+KKS    KD
Sbjct: 351 GTRSPKKPRSPKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTS--KKKKSKDKEKD 407

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>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1|
           (Ser/Arg-related nuclear matrix protein) (SR-related
           nuclear matrix protein of 160 kDa) (SRm160)
          Length = 904

 Score = 36.6 bits (83), Expect = 0.050
 Identities = 26/105 (24%), Positives = 46/105 (43%)
 Frame = +1

Query: 205 QQRRSMPRPTGNRRAPKTPEQRRKIAEAIAAKWLDREYRERVCSAINSYHGTSSGSKVPR 384
           ++R + P P   RRA  +P  +R+++ +   K       +R   +++S H    GS   R
Sbjct: 611 KRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKH--RKGSSPSR 668

Query: 385 KQRTPREPGAKREKKKSIQHRAVSLDDAHARTAPVKRKKSATPYK 519
             R  R P   +    S + RA       +   PV+R  S++P +
Sbjct: 669 STREARSPQPNKRHSPSPRPRA---PQTSSSPPPVRRGASSSPQR 710



 Score = 31.6 bits (70), Expect = 1.6
 Identities = 26/102 (25%), Positives = 39/102 (38%), Gaps = 6/102 (5%)
 Frame = +1

Query: 208 QRRSMPRPTGNRRAPKTPEQRRKIAEAIAAKWLDREY------RERVCSAINSYHGTSSG 369
           +RR  P P   RR P  P +RR  +    +  + R Y      + R  S        +S 
Sbjct: 568 RRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASP 627

Query: 370 SKVPRKQRTPREPGAKREKKKSIQHRAVSLDDAHARTAPVKR 495
           S  P K+R    P  K+      + R+ SL   H + +   R
Sbjct: 628 SP-PPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSR 668

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>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1|
          Length = 917

 Score = 35.8 bits (81), Expect = 0.085
 Identities = 26/105 (24%), Positives = 46/105 (43%)
 Frame = +1

Query: 205 QQRRSMPRPTGNRRAPKTPEQRRKIAEAIAAKWLDREYRERVCSAINSYHGTSSGSKVPR 384
           ++R + P P   RRA  +P  +R+++ +   K       +R   +++S H    GS   R
Sbjct: 625 KRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKH--RKGSSPSR 682

Query: 385 KQRTPREPGAKREKKKSIQHRAVSLDDAHARTAPVKRKKSATPYK 519
             R  R P   +    S + RA       +   PV+R  S++P +
Sbjct: 683 STREARSPQPNKRHSPSPRPRAPQT----SSPPPVRRGASSSPQR 723



 Score = 31.6 bits (70), Expect = 1.6
 Identities = 26/102 (25%), Positives = 39/102 (38%), Gaps = 6/102 (5%)
 Frame = +1

Query: 208 QRRSMPRPTGNRRAPKTPEQRRKIAEAIAAKWLDREY------RERVCSAINSYHGTSSG 369
           +RR  P P   RR P  P +RR  +    +  + R Y      + R  S        +S 
Sbjct: 582 RRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASP 641

Query: 370 SKVPRKQRTPREPGAKREKKKSIQHRAVSLDDAHARTAPVKR 495
           S  P K+R    P  K+      + R+ SL   H + +   R
Sbjct: 642 SP-PPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSR 682

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>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 35.8 bits (81), Expect = 0.085
 Identities = 27/103 (26%), Positives = 45/103 (43%)
 Frame = +1

Query: 205 QQRRSMPRPTGNRRAPKTPEQRRKIAEAIAAKWLDREYRERVCSAINSYHGTSSGSKVPR 384
           ++R + P P   RRA  +P  +R+++ +   K       +R   +++S H    GS   R
Sbjct: 630 KRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSPTVTKRRSPSLSSKH--RKGSSPGR 687

Query: 385 KQRTPREPGAKREKKKSIQHRAVSLDDAHARTAPVKRKKSATP 513
             R  R P   +    S + RA       +   PV+R  SA+P
Sbjct: 688 STREARSPQPNKRHSPSPRPRAPQT----SSPPPVRRGASASP 726



 Score = 30.8 bits (68), Expect = 2.7
 Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 6/96 (6%)
 Frame = +1

Query: 208 QRRSMPRPTGNRRAPKTPEQRRKIAEAIAAKWLDREY------RERVCSAINSYHGTSSG 369
           +RR  P P   RR P  P +RR  +    +  + R Y      + R  S        +S 
Sbjct: 587 RRRRSPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASP 646

Query: 370 SKVPRKQRTPREPGAKREKKKSIQHRAVSLDDAHAR 477
           S  P K+R    P  K+      + R+ SL   H +
Sbjct: 647 SP-PPKRRVSHSPPPKQRSPTVTKRRSPSLSSKHRK 681

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>ILVC_PHOLL (Q7MYK9) Ketol-acid reductoisomerase (EC 1.1.1.86)|
           (Acetohydroxy-acid isomeroreductase)
           (Alpha-keto-beta-hydroxylacil reductoisomerase)
          Length = 492

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
 Frame = +1

Query: 61  MVQDGCFVEWRKMIADAARKGFAGG-IAFQWNSHKILTEQLRQEWLEKVQQRRSMPRPTG 237
           M+Q G  + + K++AD A  G+AG  I F W +   +TE L+Q  +  +  R S P    
Sbjct: 228 MLQAGSLLCYDKLVADGAEPGYAGKLIQFGWET---ITEALKQGGITLMMDRLSNP---A 281

Query: 238 NRRAPKTPEQRRKIAEAIAAKWLD 309
             RA    EQ +++   +  K +D
Sbjct: 282 KLRAYALSEQLKEMMTPLFQKHMD 305

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>IF2_VIBF1 (Q5E7L5) Translation initiation factor IF-2|
          Length = 893

 Score = 34.3 bits (77), Expect = 0.25
 Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
 Frame = +1

Query: 172 EQLRQEWLEKVQQRRSMPRPTGNRRAPKTPEQRRKIAEAIAAKWLDREYRERVCSAINSY 351
           EQ ++E  E   ++           A K  E+ RK+AE   A+W + E ++        Y
Sbjct: 179 EQAKKEAEELKARQELEATRKAEAEAAKLVEEARKLAEENEARWKEEEQKKSAAEKDADY 238

Query: 352 HGTSSGSKVPRKQRTPR--EPGAKREKKKS 435
           H T+S      +    R  E   +R KKK+
Sbjct: 239 HVTTSSHAREAEDAADRKEEQQPRRRKKKA 268

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>RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-1-like protein) (Atrophin-1-related protein)
          Length = 1566

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 30/135 (22%), Positives = 58/135 (42%), Gaps = 8/135 (5%)
 Frame = +1

Query: 127  AGGIAFQWNSHKILTEQLRQEWLEKVQQRRSMPRPTGNRRAPKTPEQRRKIAE------- 285
            +GG     +S  + T Q+++E L+  ++  S P P      P++P     + +       
Sbjct: 1076 SGGSIAGGSSCPLPTVQIKEEALDDAEEPESPPPP------PRSPSPEPTVVDTPSHASQ 1129

Query: 286  -AIAAKWLDREYRERVCSAINSYHGTSSGSKVPRKQRTPREPGAKREKKKSIQHRAVSLD 462
             A   K LDR Y    C+  + Y    +GSK+ +K+    E   +  ++K+ + R    +
Sbjct: 1130 SARFYKHLDRGYNS--CARTDLYFMPLAGSKLAKKREEAIEKAKREAEQKAREEREREKE 1187

Query: 463  DAHARTAPVKRKKSA 507
                R    +R++ A
Sbjct: 1188 KEKEREREREREREA 1202

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>ACCA_VIBCH (Q9KPW8) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase
           carboxyltransferase subunit alpha) (ACCase subunit
           alpha)
          Length = 319

 Score = 33.1 bits (74), Expect = 0.55
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
 Frame = +1

Query: 79  FVEWRKMIADAAR---KGFAGGIA-FQWNSHKILTEQLRQEWLEKVQQRRSMPRPTGNRR 246
           F E+ ++  D A    K   GGIA  +  S  ++  Q  +E  EKV++   MP+P G R+
Sbjct: 83  FTEFDELAGDRAYADDKAIVGGIARLEGRSVMVIGHQKGRETREKVKRNFGMPKPEGYRK 142

Query: 247 APKTPEQRRK 276
           A +  E   +
Sbjct: 143 ALRLMEMAER 152

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>SGO1_CAEBR (Q60ZS1) Shugoshin|
          Length = 306

 Score = 33.1 bits (74), Expect = 0.55
 Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 13/136 (9%)
 Frame = +1

Query: 157 HKILTEQLRQEWLEKVQQRRSM-PRPTG--NRRAPKTPEQRRKIAEAIAAKWLDREYRER 327
           HK L + ++Q  LE     + M P P+G   RRAPK      K+ E+    +   +Y E 
Sbjct: 99  HKKLVQNIQQTGLELGGIFKDMEPEPSGMVTRRAPKMECNLEKLDESPVRNFPRSDYEEE 158

Query: 328 VCSAINSYHGTSSGSKVPR--KQRTPR-----EPGAKREKKKSIQHRAVSLDDAHA---R 477
             S ++  +G SS S + +  +  TPR       G + E   S+ H  V  + A A   +
Sbjct: 159 NKSPMDIQNGPSSSSSMTQNLENGTPRMAQRASKGRRSELFHSL-HENVPEEAAPAVGYK 217

Query: 478 TAPVKRKKSATPYKDP 525
            AP+    S TP   P
Sbjct: 218 RAPLLIAPSETPGGPP 233

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>ASB16_HUMAN (Q96NS5) Ankyrin repeat and SOCS box protein 16 (ASB-16)|
          Length = 453

 Score = 33.1 bits (74), Expect = 0.55
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +1

Query: 142 FQWNSHKILTEQLRQEWLEKVQQRRSMPRPTGNRRAPKTPEQR 270
           F + S  + + +L+QEWLE   +RR+  +   +RR P +P  R
Sbjct: 6   FPFTSSMLRSLRLQQEWLEWEDRRRAAAQQCRSRRCPSSPRAR 48

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>NKTR_HUMAN (P30414) NK-tumor recognition protein (Natural-killer cells|
           cyclophilin-related protein) (NK-TR protein)
          Length = 1462

 Score = 32.7 bits (73), Expect = 0.72
 Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
 Frame = +1

Query: 190 WLEKVQQRRSMPRPTGNRRAPKTPEQRRKIAEAIAAKWLDREYRERVCS-AINSYHGTSS 366
           W E++Q+ R+   P+G + +     +  K+++  +++W +R   +R  S + N Y+   S
Sbjct: 365 WKEEMQRLRAYRPPSGEKWS-----KGDKLSDPCSSRWDERSLSQRSRSWSYNGYYSDLS 419

Query: 367 GSKVPRKQRTPREPG--AKREKKKSIQHRAVSLDDAHARTAPVKRKK 501
                    T R  G   KR K+K ++H+       H R     +K+
Sbjct: 420 ---------TARHSGHHKKRRKEKKVKHKKKGKKQKHCRRHKQTKKR 457

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>IF2_PSEHT (Q3IJ53) Translation initiation factor IF-2|
          Length = 886

 Score = 32.7 bits (73), Expect = 0.72
 Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 2/118 (1%)
 Frame = +1

Query: 85  EWRKMIADAARKGFAGGIAFQWNSHKILTEQLRQEWLEKVQQRRSMPRPTGNRRAPKTPE 264
           E  K  ADA RK     +  +  S K   +++  E L+K  +  ++ +      A +  E
Sbjct: 152 EEAKRKADAERKAKQKQMTPE-QSAKSEKDRIEAERLQKEAEEAALKK--AEEEAKRQAE 208

Query: 265 QRRKIAEAIAAKWLDREYRERVCSAINSYHGTSS--GSKVPRKQRTPREPGAKREKKK 432
           + RK+AE  +A+W   E   +     + +H T+S    +         E G +R KKK
Sbjct: 209 EARKLAEENSARWKKEEEERKKREETSDHHLTTSTYAREAEDVADARDEQGTRRAKKK 266

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>IF2_IDILO (Q5QTY8) Translation initiation factor IF-2|
          Length = 896

 Score = 32.3 bits (72), Expect = 0.94
 Identities = 24/101 (23%), Positives = 43/101 (42%)
 Frame = +1

Query: 205 QQRRSMPRPTGNRRAPKTPEQRRKIAEAIAAKWLDREYRERVCSAINSYHGTSSGSKVPR 384
           +Q+    R    + A    E+ RK+AE  A +W + E + +     + +  TSS ++   
Sbjct: 199 RQQEEEARKKAEKEAEAQAEEARKLAEENAKRWEEEEQKRKQQEKEDVHFTTSSTAQEAE 258

Query: 385 KQRTPREPGAKREKKKSIQHRAVSLDDAHARTAPVKRKKSA 507
             +   E    R++ K  + +    DD   R    KR+K A
Sbjct: 259 DAQDFDEERKSRKRGKKRRRKDEESDDTPRRE---KRRKGA 296

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>TRDN_CANFA (P82179) Triadin|
          Length = 700

 Score = 32.3 bits (72), Expect = 0.94
 Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
 Frame = +1

Query: 244 RAPKTPEQRRK-IAEAIAAKWLDREYRERVCSAINSYHGTSSGSKVPRKQRTPREPGAKR 420
           +AP+T +   K +A+A A K   +E  ++  + +  +     G K  +K++   EP AK 
Sbjct: 347 KAPETKQGTIKVVAQAAAKKDEKKEDSKKTKTPVEEH---PKGKKQEKKEKYV-EP-AKS 401

Query: 421 EKKKSIQHRAVSLDDAHARTAPVKRKKSATPYKDPMAGEKLEMITK 558
            KK   +H A S     A+T   K + SA   K  + G+K E  TK
Sbjct: 402 SKK---EHSAPSEKQVKAKTERAKEETSAASTKKAVPGKKEEKTTK 444

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>CDC15_YEAST (P27636) Cell division control protein 15 (EC 2.7.11.1)|
          Length = 974

 Score = 32.3 bits (72), Expect = 0.94
 Identities = 20/78 (25%), Positives = 36/78 (46%)
 Frame = +2

Query: 290 LLRSGWIENTVNVFAVQLIATMEHLLDLRYHVNKELRENQVQSVKRRNLFNTELSAWTMH 469
           LL+  WI +T NV   +L    E   D  YH + + +E ++     +       + W  +
Sbjct: 266 LLKHVWINSTENVKVDKLNKFKEDFTDADYHWDADFQEEKLNISPSKFSLRAAPAPWAEN 325

Query: 470 MQELLRLRERKVQLLTKI 523
            QEL  +   + QLL+++
Sbjct: 326 NQELDLMPPTESQLLSQL 343

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>TOP2B_CHICK (O42131) DNA topoisomerase 2-beta (EC 5.99.1.3) (DNA topoisomerase|
            II, beta isozyme)
          Length = 1627

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 15/96 (15%)
 Frame = +1

Query: 193  LEKVQQRRSMPRPTGNRRAP------------KTPEQRRKIAEAIAAKW-LDREYR--ER 327
            ++K+Q   +MP P G R  P            K  ++++  A+++A K   D E+   + 
Sbjct: 1230 MKKLQLEETMPSPFGRRIVPQITSAMKADASRKLLKKKKGDADSVAIKMEFDEEFGGVQA 1289

Query: 328  VCSAINSYHGTSSGSKVPRKQRTPREPGAKREKKKS 435
                 ++ +  +SG+K P+ +R  +EPG +  +  S
Sbjct: 1290 EGGGDDTVNTAASGTKTPKLKREKKEPGTRVRRAPS 1325

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>ILVC_VIBF1 (Q5E1S3) Ketol-acid reductoisomerase (EC 1.1.1.86)|
           (Acetohydroxy-acid isomeroreductase)
           (Alpha-keto-beta-hydroxylacil reductoisomerase)
          Length = 494

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
 Frame = +1

Query: 61  MVQDGCFVEWRKMIADAARKGFAGG-IAFQWNSHKILTEQLRQEWLEKVQQRRSMPRPTG 237
           M+Q G  V + KMIAD    G+AG  + + W +   +TE L+   +  +  R S P    
Sbjct: 228 MLQAGSIVSYEKMIADGIEPGYAGKLLQYGWET---ITEALKFGGVTHMMDRLSNPAKV- 283

Query: 238 NRRAPKTPEQRRKIAEAIAAKWLD 309
             +A +  E+ +++   +  K +D
Sbjct: 284 --KAFELSEELKELMRPLYNKHMD 305

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>LRC50_RAT (Q6AYH9) Leucine-rich repeat-containing protein 50|
          Length = 633

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 46/192 (23%), Positives = 72/192 (37%), Gaps = 19/192 (9%)
 Frame = +1

Query: 28  RRGWSLRLQKLMVQDG--CFVEWRKMIADAARKGFAGGIA--FQWNS--HKILTEQL--- 180
           RR  ++RL+ L   D    F + R      AR G+A       QW S  HK +T+ L   
Sbjct: 259 RRTVTVRLKHLTYLDDRPVFPKDRACAEAWARGGYAAEKEERHQWESREHKKITDSLEAL 318

Query: 181 -----RQEWLEKVQQRRSMPRPTGNRRAPKTPEQRRKIAEAIAAKWLDREYRERVCSAIN 345
                R E  +K + R   P P   +  P +PE + K  +    + ++   +E       
Sbjct: 319 AMIKRRAEERKKARDRGETPLPESEKSIPTSPEAQEKPPKGETQQKMESFVKE------- 371

Query: 346 SYHGTSSGSKVPRKQRTPREPGAKREKKKSIQHRAVSLDD-----AHARTAPVKRKKSAT 510
                   S   + +  P +PG   E    + +RAV   D     AH +T  V   +  T
Sbjct: 372 --------SFEAKDELFPEKPGEGEELSVVVGNRAVEDADLSGNLAHTQTPVVVTPEEVT 423

Query: 511 PYKDPMAGEKLE 546
              +   G + E
Sbjct: 424 SPVEATDGARTE 435

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>TOP2A_CRIGR (P41515) DNA topoisomerase 2-alpha (EC 5.99.1.3) (DNA topoisomerase|
            II, alpha isozyme)
          Length = 1526

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 26/109 (23%), Positives = 46/109 (42%)
 Frame = +1

Query: 196  EKVQQRRSMPRPTGNRRAPKTPEQRRKIAEAIAAKWLDREYRERVCSAINSYHGTSSGSK 375
            +K Q    +P P G R  P+   + +  AE    K +  E  E   +  N     S   +
Sbjct: 1198 KKAQMSEVLPSPHGKRVIPQVTMEMKAEAEKKIRKKIKSENVEGTPTE-NGLELGSLKQR 1256

Query: 376  VPRKQRTPREPGAKREKKKSIQHRAVSLDDAHARTAPVKRKKSATPYKD 522
            + +KQ+  +EPGA  +K+ ++  +            P+K+ K   P+ D
Sbjct: 1257 IEKKQK--KEPGAMTKKQTTLAFK------------PIKKGKKRNPWSD 1291

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>H11R_CHICK (P08288) Histone H1.11R|
          Length = 218

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
 Frame = +1

Query: 187 EWLEKVQQRRSMPRPTGNRRAPKTPEQRRKIAEAIAAKWLDREYRERVCSAINSYHGTSS 366
           E LEK  ++++         A K     +K  +A+A K   ++ ++   SA      +  
Sbjct: 114 EGLEKAPKKKASAAKPKKAAAKKPAAAAKKPKKAVAVKKSPKKAKKPAASATKKSVKSPK 173

Query: 367 GSKVPRKQRTPREPG-AKREKKKSIQHRAVSLDDAHARTAPVKRK 498
            +  P+K    + P  AK  K K+ + +A     A A+ A  K+K
Sbjct: 174 KAAKPKKAVAAKSPAKAKAVKPKAAKPKAAKPKAAKAKKAAAKKK 218

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>YR871_MIMIV (Q5UP41) Hypothetical protein R871|
          Length = 561

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 18/62 (29%), Positives = 32/62 (51%)
 Frame = +1

Query: 319 RERVCSAINSYHGTSSGSKVPRKQRTPREPGAKREKKKSIQHRAVSLDDAHARTAPVKRK 498
           +ERV    +  + +SS  K P + R+P+   + ++ K S +H++   D +  R    KR 
Sbjct: 111 QERVVVCESLENKSSSKDKSPSRGRSPKRHKSSKKHKSSKKHKSSKHDKSSKRDKSSKRH 170

Query: 499 KS 504
           KS
Sbjct: 171 KS 172

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>KI67_HUMAN (P46013) Antigen KI-67|
          Length = 3256

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 11/80 (13%)
 Frame = +1

Query: 217  SMPRPTGNRRAPKTPEQRRKIAEAIAA--KWLDREYRERV----CSAINSYHGTSS---- 366
            SM  PT  RR PKTP  +R I E ++A  +     + ++V       IN +  T+     
Sbjct: 2110 SMDTPTSTRRRPKTPLGKRDIVEELSALKQLTQTTHTDKVPGDEDKGINVFRETAKQKLD 2169

Query: 367  -GSKVPRKQRTPREPGAKRE 423
              + V   +R PR P  K +
Sbjct: 2170 PAASVTGSKRQPRTPKGKAQ 2189

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>NHR44_CAEEL (Q22555) Nuclear hormone receptor family member nhr-44|
          Length = 428

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 22/99 (22%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
 Frame = +2

Query: 236 VIEERQKLLSRGEKLQKPL-LRSGWIENTVNVFAVQLIATMEHLLDLRYHVNKELRENQV 412
           +I++   +L R  KL+K + ++S   +    +  V+     E + +LR     E  +N V
Sbjct: 158 IIKDADYILKRIPKLEKSVKVKSSLEQLAFGLQEVRKEQLFESVPELRKIGKMETWDNWV 217

Query: 413 QSVKRRNLFNTELSAWTMHMQELLRLRERKVQLLTKILW 529
           + ++R          W MH +E  +L + +  ++ K +W
Sbjct: 218 KGMRRAG-------EWIMHFEEFRQLEQEEKMVILKCMW 249

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>RIMS1_MOUSE (Q99NE5) Regulating synaptic membrane exocytosis protein 1|
           (Rab3-interacting molecule 1) (RIM 1) (Rab3-interacting
           protein 1) (Fragment)
          Length = 388

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 18/61 (29%), Positives = 32/61 (52%)
 Frame = +1

Query: 358 TSSGSKVPRKQRTPREPGAKREKKKSIQHRAVSLDDAHARTAPVKRKKSATPYKDPMAGE 537
           T +GS+VPR+++   +  ++ +   S    AVS  D  +  AP+ R K A P +  +  E
Sbjct: 221 TGAGSEVPREKKARLQERSRSQTPLSTA--AVSSQDTASHGAPLDRNKGAEPSQQALGPE 278

Query: 538 K 540
           +
Sbjct: 279 Q 279

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>TOP3_HAEIN (P43704) DNA topoisomerase 3 (EC 5.99.1.2) (DNA topoisomerase III)|
          Length = 651

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
 Frame = +1

Query: 139 AFQWNSHKILTEQLRQEWLEKVQQRRSMPRPTGNRRAPKTPEQRRKIAEAIAAKWL---- 306
           A+Q   + ILTEQ  + W +K  +      PT   R     ++ R I   IA ++L    
Sbjct: 366 AYQVLPNVILTEQRNRCWNDKKVEAHHAIIPTAKNRPVNLTQEERNIYSLIARQYLMQFC 425

Query: 307 -DREYRE 324
            D EYR+
Sbjct: 426 PDAEYRK 432

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>YBD1_YEAST (P38200) Protein YBL031W|
          Length = 338

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +1

Query: 358 TSSGSKVPRKQRTPREPGAKREKKKSIQHRAVSLDDAHARTAPVKR 495
           T+S +K+    R            +S  HR++S+ D HA+T PV+R
Sbjct: 210 TNSLNKINSAHRNTSSSSTASSIPRSKVHRSISIRDLHAKTKPVER 255

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>MBB1A_MOUSE (Q7TPV4) Myb-binding protein 1A (Myb-binding protein of 160 kDa)|
          Length = 1344

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 25/118 (21%), Positives = 52/118 (44%), Gaps = 15/118 (12%)
 Frame = +1

Query: 217  SMPRPTGNRRAPKTPEQRRKIAEAIAAKWLDREYRERVCSAINSYHGTSSGSKVPRKQR- 393
            +MP  TG  + P T +++RK  +A     ++     +  +  N     S+ +K P+ Q+ 
Sbjct: 1207 AMPAATGKDQPPSTGKKKRKRVKASTPSQVNGITGAKSPAPSNPTLSPSTPAKTPKLQKK 1266

Query: 394  -------------TPREPGAKREKKKSIQHRAVSLDDAHARTA-PVKRKKSATPYKDP 525
                         +P EP +K+  ++++  + V     H ++A P KR + +   + P
Sbjct: 1267 KEKLSQVNGATPVSPIEPESKKHHQEALSTKEVIRKSPHPQSALPKKRARLSLVSRSP 1324

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>SLC31_RAT (Q64319) Neutral and basic amino acid transport protein rBAT|
           (B(0,+)-type amino acid transport protein) (NAA-TR) (D2)
          Length = 683

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 24/109 (22%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
 Frame = +2

Query: 170 LSNCGRSGWRKSSKEDQCLGRQVIEERQKLLSRGEKLQKPL--LRSGWIENTVNVFAVQL 343
           LS  G S W+   +  QC   Q ++E+  L  R   +Q+ +  +   W+   V+ F+   
Sbjct: 253 LSVYGNSSWQFDEERKQCYFHQFLKEQPDLNFRNPAVQEEIKEIIKFWLSKGVDGFSFDA 312

Query: 344 IATMEHLLDLRYHVNKELRENQV-QSVKRRNLFNTELSAWTMHMQELLR 487
           +  +    DLR  +  ++  +Q+  +V R +    + +   + M +L+R
Sbjct: 313 VKFLLEAKDLRNEI--QVNTSQIPDTVTRYSELYHDFTTTQVGMHDLVR 359

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>DSG2_HUMAN (Q14126) Desmoglein-2 precursor (HDGC)|
          Length = 1117

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 28/97 (28%), Positives = 45/97 (46%)
 Frame = +1

Query: 253  KTPEQRRKIAEAIAAKWLDREYRERVCSAINSYHGTSSGSKVPRKQRTPREPGAKREKKK 432
            K  EQR+K A   +         E+  + +NS +  SSGS  P   ++ +E  A++  ++
Sbjct: 848  KEIEQRQKPATETSMNTASHSLCEQ--TMVNSENTYSSGSSFP-VPKSLQEANAEKVTQE 904

Query: 433  SIQHRAVSLDDAHARTAPVKRKKSATPYKDPMAGEKL 543
             +  R+VS   A         +K ATP  DPMA   +
Sbjct: 905  IVTERSVSSRQA---------QKVATPLPDPMASRNV 932

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>ACCA_VIBPA (Q87MF3) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase
           carboxyltransferase subunit alpha) (ACCase subunit
           alpha)
          Length = 319

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
 Frame = +1

Query: 79  FVEWRKMIADAA---RKGFAGGIA-FQWNSHKILTEQLRQEWLEKVQQRRSMPRPTGNRR 246
           F E+ ++  D A    K   GGIA  +     I+  Q  +E  EKV++   MP+P G R+
Sbjct: 83  FEEFDELAGDRAFADDKAIVGGIARLEGRPVMIIGHQKGRETKEKVRRNFGMPKPEGYRK 142

Query: 247 APKTPEQRRK 276
           A +  E   +
Sbjct: 143 ALRLMEMAER 152

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>C90A1_ARATH (Q42569) Cytochrome P450 90A1 (EC 1.14.-.-)|
          Length = 472

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = +1

Query: 169 TEQLRQEWLEKVQQRRSMPRPTGNRRAPKTPEQRRKIAEAIAAKWLDREYRE 324
           +E LR+E+L  ++   S+P P  +    K  + RRK+AEA+    + R   E
Sbjct: 191 SESLRKEYLLVIEGFFSLPLPLFSTTYRKAIQARRKVAEALTVVVMKRREEE 242

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>SWR1_USTMA (Q4P328) Helicase SWR1 (EC 3.6.1.-)|
          Length = 1830

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 8/116 (6%)
 Frame = +1

Query: 145 QWNSHKILTEQLRQEWLEKVQQRRSMPRPTGNRRAPKTPEQRRKIAEAIAAKWLDREYRE 324
           Q NS K+    + Q W           R  G     K  E+RR  A    AKW  RE  +
Sbjct: 591 QQNSRKV-ARMIAQHW----------ERQLGTSEREKKAEERRLRA---LAKWTLREVLK 636

Query: 325 RVCSAINSYHGTSSGSKVPRKQRTPRE--------PGAKREKKKSIQHRAVSLDDA 468
           +   A+N      + ++   K+++ +E          A  +K+  +  RA SLDD+
Sbjct: 637 QWRLAVNVVRARKAAAEKAEKEKSDKEQLNAILEQSTAMLKKQHEVMTRADSLDDS 692

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>POLG_RTSVA (Q83034) Genome polyprotein [Contains: Putative leader protein; Coat|
            protein 1 (25 kDa protein) (CP-1); Coat protein 2 (26 kDa
            protein) (CP-2); Coat protein 3 (35 kDa protein) (CP-3);
            Putative helicase (EC 3.6.1.-) (Putative NTP-binding
            protei
          Length = 3473

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 3/99 (3%)
 Frame = +1

Query: 184  QEWLEKVQQRRSMPRPTGNRRAPK---TPEQRRKIAEAIAAKWLDREYRERVCSAINSYH 354
            +EW  +      +P  +G +RA K   TP  R    EA +  WL + + E   S   + H
Sbjct: 1072 KEWCSRESLLMRVPLKSGKKRAFKYAVTPRMRTLPPEATSLSWLSQIFVEWRGSLTYTIH 1131

Query: 355  GTSSGSKVPRKQRTPREPGAKREKKKSIQHRAVSLDDAH 471
              S  +      R   +P  K ++K+        LD AH
Sbjct: 1132 VQSGSAIQHSYMRIWYDPNGKTDEKE-----VKFLDSAH 1165

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>SLC31_HUMAN (Q07837) Neutral and basic amino acid transport protein rBAT|
           (B(0,+)-type amino acid transport protein) (NBAT) (D2H)
          Length = 685

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
 Frame = +2

Query: 170 LSNCGRSGWRKSSKEDQCLGRQVIEERQKLLSRGEKLQ---KPLLRSGWIENTVNVFAVQ 340
           LS  G S W      +QC   Q ++E+  L  R   +Q   K +LR  W+   V+ F++ 
Sbjct: 256 LSVYGNSSWHFDEVRNQCYFHQFMKEQPDLNFRNPDVQEEIKEILRF-WLTKGVDGFSLD 314

Query: 341 LIATMEHLLDLRYHVNKELRENQVQ 415
            +   + LL+ + H+  E++ N+ Q
Sbjct: 315 AV---KFLLEAK-HLRDEIQVNKTQ 335

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>FOSL2_MOUSE (P47930) Fos-related antigen 2|
          Length = 326

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
 Frame = +1

Query: 151 NSHKILTEQLRQEWLEKVQQRRSMPRPTGNRRAPKTPEQRRKIAEAIAAKWLDREYRERV 330
           N  + LTE+L+ E  E  +++  + +     +  K   +  K+A     K    E R   
Sbjct: 143 NRRRELTEKLQAETEELEEEKSGLQKEIAELQKEKEKLEFMKVAHGPVCKISPEERRSPP 202

Query: 331 CSAINSYHGTSSG-SKVPRKQRTPRE 405
            S + S  GT S    V  KQ  P E
Sbjct: 203 TSGLQSLRGTGSAVGPVVVKQEPPEE 228

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>ILVC_SHEON (Q8E9D5) Ketol-acid reductoisomerase (EC 1.1.1.86)|
           (Acetohydroxy-acid isomeroreductase)
           (Alpha-keto-beta-hydroxylacil reductoisomerase)
          Length = 492

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +1

Query: 61  MVQDGCFVEWRKMIADAARKGFAGGIAFQ-WNSHKILTEQLRQEWLEKVQQRRSMPRPTG 237
           M+Q G  + + KM+AD    G+A  +  Q W +   +TE L+   +  +  R S P    
Sbjct: 228 MLQTGAILGYEKMVADGVEPGYAAKLIQQGWET---VTEALKHGGITNMMDRLSNP---A 281

Query: 238 NRRAPKTPEQRRKIAEAIAAKWLD 309
             +A +  E  + I + +  K +D
Sbjct: 282 KIKAFEIAEDLKDILQPLFEKHMD 305

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>EXP9_STRR6 (P0A4D8) Probable ATP-dependent RNA helicase exp9 (EC 3.6.1.-)|
           (Exported protein 9)
          Length = 524

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
 Frame = +2

Query: 215 DQCLGRQVIEERQKLLSRGEKLQKPLLRSGWIENTVNVFAVQLIATMEHLLDLRYHVNKE 394
           D+ L    +E+ + ++SR  + ++ LL S  + + +    VQ +   EH+      +  E
Sbjct: 153 DEMLNMGFLEDIEAIISRVPENRQTLLFSATMPDAIKRIGVQFMKAPEHVKIAAKELTTE 212

Query: 395 LRENQVQSVKRRNLFNTELSAWTMHMQELLRL---RERKVQLLTK 520
           L +     VK +  F+T      +   EL  +    +R+V  LT+
Sbjct: 213 LVDQYYIRVKEQEKFDTMTRLMDVAQPELAIVFGRTKRRVDELTR 257

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>EXP9_STRPN (P0A4D7) Probable ATP-dependent RNA helicase exp9 (EC 3.6.1.-)|
           (Exported protein 9)
          Length = 524

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
 Frame = +2

Query: 215 DQCLGRQVIEERQKLLSRGEKLQKPLLRSGWIENTVNVFAVQLIATMEHLLDLRYHVNKE 394
           D+ L    +E+ + ++SR  + ++ LL S  + + +    VQ +   EH+      +  E
Sbjct: 153 DEMLNMGFLEDIEAIISRVPENRQTLLFSATMPDAIKRIGVQFMKAPEHVKIAAKELTTE 212

Query: 395 LRENQVQSVKRRNLFNTELSAWTMHMQELLRL---RERKVQLLTK 520
           L +     VK +  F+T      +   EL  +    +R+V  LT+
Sbjct: 213 LVDQYYIRVKEQEKFDTMTRLMDVAQPELAIVFGRTKRRVDELTR 257

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>POLG_RTSVT (Q91PP5) Genome polyprotein [Contains: Putative leader protein; Coat|
            protein 1 (25 kDa protein) (CP-1); Coat protein 2 (26 kDa
            protein) (CP-2); Coat protein 3 (35 kDa protein) (CP-3);
            Putative helicase (EC 3.6.1.-) (Putative NTP-binding
            protei
          Length = 3471

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 3/99 (3%)
 Frame = +1

Query: 184  QEWLEKVQQRRSMPRPTGNRRAPK---TPEQRRKIAEAIAAKWLDREYRERVCSAINSYH 354
            +EW  +      +P   G +RA K   TP  R    EA +  WL + + E   S   + H
Sbjct: 1069 KEWCSRESLLMRIPLKNGKKRAFKYAVTPRMRTLPPEATSLSWLSQIFVEWRGSLTYTIH 1128

Query: 355  GTSSGSKVPRKQRTPREPGAKREKKKSIQHRAVSLDDAH 471
              S  +      R   +P  K ++K+        LD AH
Sbjct: 1129 VQSGSAIQHSYMRIWYDPNGKTDEKE-----IKFLDSAH 1162

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>ILVC_VIBCH (Q9KVI4) Ketol-acid reductoisomerase (EC 1.1.1.86)|
           (Acetohydroxy-acid isomeroreductase)
           (Alpha-keto-beta-hydroxylacil reductoisomerase)
          Length = 494

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +1

Query: 61  MVQDGCFVEWRKMIADAARKGFAGG-IAFQWNSHKILTEQLRQEWLEKVQQRRSMP 225
           M+Q G  V + KM+AD    G+AG  + F W +   +TE L+   +  +  R S P
Sbjct: 228 MLQAGSIVCYEKMVADGIDPGYAGKLLQFGWET---ITEALKFGGITHMMDRLSNP 280

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>RIMS1_RAT (Q9JIR4) Regulating synaptic membrane exocytosis protein 1|
           (Rab3-interacting molecule 1) (RIM 1)
          Length = 1615

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 18/61 (29%), Positives = 31/61 (50%)
 Frame = +1

Query: 358 TSSGSKVPRKQRTPREPGAKREKKKSIQHRAVSLDDAHARTAPVKRKKSATPYKDPMAGE 537
           T +GS+VPR+++   +  ++ +   S    AVS  D     AP+ R K A P +  +  E
Sbjct: 221 TGAGSEVPREKKARLQERSRSQTPLSTA--AVSSQDTATPGAPLHRNKGAEPSQQALGPE 278

Query: 538 K 540
           +
Sbjct: 279 Q 279

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>ACCA_NEIG1 (Q5F8F5) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase
           carboxyltransferase subunit alpha) (ACCase subunit
           alpha)
          Length = 319

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
 Frame = +1

Query: 70  DGCFVEWRKMIAD---AARKGFAGGIA-FQWNSHKILTEQLRQEWLEKVQQRRSMPRPTG 237
           D  F ++ ++  D   A      GG+A F   S  ++  Q  ++  EK+++   MPRP G
Sbjct: 77  DALFTDFEELHGDRHFADDHAIVGGLARFNGQSVVVVGHQKGRDTKEKIRRNFGMPRPEG 136

Query: 238 NRRA 249
            R+A
Sbjct: 137 YRKA 140

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>ATRIP_DROME (Q9VVN4) ATR-interacting protein mus304 (Mutagen-sensivite protein|
           304)
          Length = 846

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = +2

Query: 392 ELRENQVQSVKRRNLFNTELSAWTMHMQELLRLRERKVQLLTKIL 526
           E  EN+ Q+ KRRN F  EL    +H   L    E    LL +IL
Sbjct: 327 EYSENEDQTKKRRNHFELELKQLLLHYARLQAKPESVDNLLPRIL 371

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>ACCA_AZOSE (Q5P2J0) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase
           carboxyltransferase subunit alpha) (ACCase subunit
           alpha)
          Length = 322

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +1

Query: 79  FVEWRKMIADAARKGFAGGIA-FQWNSHKILTEQLRQEWLEKVQQRRSMPRPTGNRRA 249
           FVE       A  K   GG+A F   S  ++  Q  ++  EK+ +   MPRP G R+A
Sbjct: 83  FVELHGDRTYADDKAIVGGLARFNGQSCVVIGHQKGRDTKEKILRNFGMPRPEGYRKA 140

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>MAST1_MOUSE (Q9R1L5) Microtubule-associated serine/threonine-protein kinase 1 (EC|
            2.7.11.1) (Syntrophin-associated serine/threonine-protein
            kinase)
          Length = 1566

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 24/75 (32%), Positives = 32/75 (42%)
 Frame = +1

Query: 304  LDREYRERVCSAINSYHGTSSGSKVPRKQRTPREPGAKREKKKSIQHRAVSLDDAHARTA 483
            L R+YR   C +  +   TSS   +P     P  PG       S   R  SL +    T 
Sbjct: 1188 LHRQYRSARCKSAGNTRCTSSAHTIPDAGCPPPLPG---HTVGSSHTRRASLPNYLIATC 1244

Query: 484  PVKRKKSATPYKDPM 528
             V+R KSA P + P+
Sbjct: 1245 -VRRPKSAEPPRSPL 1258

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>PRC1_HUMAN (O43663) Protein regulator of cytokinesis 1|
          Length = 620

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = +1

Query: 136 IAFQWNSHKILTEQLRQEWLEKVQQRRSMPRPTGNRRAPKTPEQRRKIA 282
           +A QW  H++  E+ +QE   K +++       G+  AP+TP +RR +A
Sbjct: 432 VAEQWEMHRLEKERAKQERQLKNKKQTETEMLYGS--APRTPSKRRGLA 478

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>AT11B_RABIT (Q9N0Z4) Probable phospholipid-transporting ATPase IF (EC 3.6.3.1)|
           (ATPase class I type 11B) (ATPase IR)
           (RING-finger-binding protein) (Fragment)
          Length = 1169

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 16/59 (27%), Positives = 29/59 (49%)
 Frame = +2

Query: 224 LGRQVIEERQKLLSRGEKLQKPLLRSGWIENTVNVFAVQLIATMEHLLDLRYHVNKELR 400
           +GR +I ++ + + R    +  LLR   ++NT  +F V +   ME  + L Y    + R
Sbjct: 213 MGRMIITQQMEEIVRPLGPESLLLRGARLKNTKEIFGVAVYTGMETKMALNYKSKSQKR 271

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>AT11B_HUMAN (Q9Y2G3) Probable phospholipid-transporting ATPase IF (EC 3.6.3.1)|
           (ATPase class I type 11B) (ATPase IR)
          Length = 1177

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 16/59 (27%), Positives = 29/59 (49%)
 Frame = +2

Query: 224 LGRQVIEERQKLLSRGEKLQKPLLRSGWIENTVNVFAVQLIATMEHLLDLRYHVNKELR 400
           +GR +I ++ + + R    +  LLR   ++NT  +F V +   ME  + L Y    + R
Sbjct: 221 MGRMIITQQMEEIVRPLGPESLLLRGARLKNTKEIFGVAVYTGMETKMALNYKSKSQKR 279

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>POGK_MOUSE (Q80TC5) Pogo transposable element with KRAB domain|
          Length = 607

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = +1

Query: 124 FAGGIAFQWNSHKILTEQLRQEWLEKVQQRR--SMPRPTG 237
           F  G+  + + +  +TE L Q+WLE V +RR  ++PR  G
Sbjct: 427 FPSGMEIRCHRYGWMTEDLMQDWLEVVWRRRTGAVPRQRG 466

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>SCYB9_MOUSE (P18340) Small inducible cytokine B9 precursor (CXCL9) (Gamma|
           interferon-induced monokine) (MIG) (M119)
          Length = 126

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
 Frame = +1

Query: 172 EQLRQEWLEKVQQRRSMPRPTGNR-----RAPKTPEQRRK 276
           ++L +EW +K+ Q++   R   ++     R PKTP+ RR+
Sbjct: 82  KKLMKEWEKKINQKKKQKRGKKHQKNMKNRKPKTPQSRRR 121

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>NS1_IACHI (P11618) Nonstructural protein 1 (NS1) (NS1A)|
          Length = 237

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = +1

Query: 130 GGIAFQWNSHKILTEQLRQEWLEKVQQRRSMPRPTGNRRAPKTPEQRRKIAEAIAAK 300
           GG+  +WN + +         + K  QR +      N R P TP+Q+RK+A AI ++
Sbjct: 183 GGL--EWNDNTVR--------VSKTLQRFAWRSSNENGRPPLTPKQKRKMARAIRSE 229

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>GUAA_DESVH (Q72D86) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 515

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 11/59 (18%)
 Frame = +2

Query: 233 QVIEERQKLLSRGEKL-QKPLLRSGWIENTVNVFAVQLI----------ATMEHLLDLR 376
           ++ EER  +L R +K+ Q+ L+ SGW       FAV L            T EH++ LR
Sbjct: 405 EITEERLDILRRADKVVQQELMSSGWYRKVWQGFAVLLPLKTVGVMGDGRTYEHVIALR 463

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>FAT_DROME (P33450) Cadherin-related tumor suppressor precursor (Protein fat)|
          Length = 5147

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
 Frame = +1

Query: 202  VQQRRSMPRPTGNRRAPKTPEQR-RKIAEAIAAKWLDR-EYRERVCSAINSYHGTSSGSK 375
            V  + S    + +R+ P  P+Q+ ++ +  + A+ ++R   R R CS I++    SS S+
Sbjct: 4893 VMSQLSGQSSSASRQKPGVPQQQAQQTSMGLTAEEIERLNGRPRTCSLISTLDAVSSSSE 4952

Query: 376  VPR 384
             PR
Sbjct: 4953 APR 4955

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>GUC2D_HUMAN (Q02846) Retinal guanylyl cyclase 1 precursor (EC 4.6.1.2)|
           (Guanylate cyclase 2D, retinal) (RETGC-1) (Rod outer
           segment membrane guanylate cyclase) (ROS-GC)
          Length = 1103

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 18/74 (24%), Positives = 38/74 (51%)
 Frame = +2

Query: 290 LLRSGWIENTVNVFAVQLIATMEHLLDLRYHVNKELRENQVQSVKRRNLFNTELSAWTMH 469
           L++  W E        +L  +M+H  DL  ++NK  + N + S+ R       L  ++ +
Sbjct: 783 LMKQCWAEQP------ELRPSMDHTFDLFKNINKGRKTNIIDSMLRM------LEQYSSN 830

Query: 470 MQELLRLRERKVQL 511
           +++L+R R  +++L
Sbjct: 831 LEDLIRERTEELEL 844

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>ILVC_PHOPR (Q6LVZ5) Ketol-acid reductoisomerase (EC 1.1.1.86)|
           (Acetohydroxy-acid isomeroreductase)
           (Alpha-keto-beta-hydroxylacil reductoisomerase)
          Length = 494

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +1

Query: 61  MVQDGCFVEWRKMIADAARKGFAGG-IAFQWNSHKILTEQLRQEWLEKVQQRRSMP 225
           M+Q G  V + KMIAD    G+AG  + + W +   +TE L+   +  +  R S P
Sbjct: 228 MLQAGSIVCYEKMIADGIDAGYAGKLLQYGWET---ITEALKFGGITHMMDRLSNP 280

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>YFH1_YEAST (P43586) Hypothetical 23.6 kDa protein in PUS3-NIC96 intergenic|
           region
          Length = 204

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
 Frame = +1

Query: 247 APKTPEQRRKIAEAIAAK-WLDREYRERVCSAIN----SYHGTSSGSKVPRKQRTPREPG 411
           APK P +R+ +   +A + + D + R ++ +  +    S     S +KV ++Q   R  G
Sbjct: 2   APKKPSKRQNLRREVAPEVFQDSQARNQLANVPHLTEKSAQRKPSKTKVKKEQSLARLYG 61

Query: 412 AKREKKKSIQHRAVSLDDAHARTAP 486
           AK++KK     + +++   +    P
Sbjct: 62  AKKDKKGKYSEKDLNIPTLNRAIVP 86

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>ACCA_IDILO (Q5QZP1) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase
           carboxyltransferase subunit alpha) (ACCase subunit
           alpha)
          Length = 318

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
 Frame = +1

Query: 79  FVEWRKMIAD---AARKGFAGGIA-FQWNSHKILTEQLRQEWLEKVQQRRSMPRPTGNRR 246
           F E+ +M  D   A  +   GGIA        ++ +Q  +E  EK+++   MP+P G R+
Sbjct: 82  FTEFDEMAGDRSFANDEAIVGGIARLDGTPVMVIGQQKGRETKEKIRRNFGMPKPEGYRK 141

Query: 247 A 249
           A
Sbjct: 142 A 142

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>NS1_IALE3 (P69274) Nonstructural protein 1 (NS1) (NS1A)|
          Length = 230

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = +1

Query: 130 GGIAFQWNSHKILTEQLRQEWLEKVQQRRSMPRPTGNRRAPKTPEQRRKIAEAIAAK 300
           GG+  +WN + +         + K  QR +      N R P TP+Q+RK+A  I +K
Sbjct: 183 GGL--EWNDNTVR--------VSKTLQRFAWRSSNENGRPPLTPKQKRKMARTIRSK 229

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>NS1_IALE2 (P69273) Nonstructural protein 1 (NS1) (NS1A)|
          Length = 230

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = +1

Query: 130 GGIAFQWNSHKILTEQLRQEWLEKVQQRRSMPRPTGNRRAPKTPEQRRKIAEAIAAK 300
           GG+  +WN + +         + K  QR +      N R P TP+Q+RK+A  I +K
Sbjct: 183 GGL--EWNDNTVR--------VSKTLQRFAWRSSNENGRPPLTPKQKRKMARTIRSK 229

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>NS1_IALE1 (P69272) Nonstructural protein 1 (NS1) (NS1A)|
          Length = 230

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = +1

Query: 130 GGIAFQWNSHKILTEQLRQEWLEKVQQRRSMPRPTGNRRAPKTPEQRRKIAEAIAAK 300
           GG+  +WN + +         + K  QR +      N R P TP+Q+RK+A  I +K
Sbjct: 183 GGL--EWNDNTVR--------VSKTLQRFAWRSSNENGRPPLTPKQKRKMARTIRSK 229


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,193,556
Number of Sequences: 219361
Number of extensions: 1686831
Number of successful extensions: 6233
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 5918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6220
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4585734400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result