ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags27k11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY090551.1| Deschampsia antarctica clone Dacor 1.1 cytochrome... 515 e-143
2dbj|AK070578.1| Oryza sativa (japonica cultivar-group) cDNA clon... 341 1e-90
3gb|BT016510.1| Zea mays clone Contig343 mRNA sequence 268 2e-68
4gb|AY103572.1| Zea mays PCO092029 mRNA sequence 240 4e-60
5gb|BT012926.1| Lycopersicon esculentum clone 114089R, mRNA sequence 186 5e-44
6ref|NM_190059.1| Oryza sativa (japonica cultivar-group), predic... 176 5e-41
7dbj|AK069403.1| Oryza sativa (japonica cultivar-group) cDNA clon... 176 5e-41
8gb|AY805120.1| Ornithogalum virens clone 3OvF39 putative cytochr... 168 1e-38
9gb|AC093953.2| Oryza sativa (japonica cultivar-group) chromosome... 163 7e-37
10dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 163 7e-37
11gb|AY088099.1| Arabidopsis thaliana clone 41320 mRNA, complete s... 147 4e-32
12ref|NM_113638.2| Arabidopsis thaliana electron transporter/ elec... 139 1e-29
13gb|AF458338.1|AF458338 Arabidopsis thaliana AT3g27240/K17E12_6 m... 139 1e-29
14gb|AY054246.1| Arabidopsis thaliana AT3g27240/K17E12_6 mRNA, com... 139 1e-29
15emb|BX824887.1|CNS0A6WM Arabidopsis thaliana Full-length cDNA Co... 139 1e-29
16emb|BX824618.1|CNS0A4TF Arabidopsis thaliana Full-length cDNA Co... 139 1e-29
17emb|BX823783.1|CNS0A6LU Arabidopsis thaliana Full-length cDNA Co... 131 3e-27
18gb|BT014041.1| Lycopersicon esculentum clone 133106F, mRNA sequence 127 4e-26
19ref|NM_123446.3| Arabidopsis thaliana electron transporter/ elec... 119 1e-23
20gb|AY116937.1| Arabidopsis thaliana AT5g40810/MHK7_4 mRNA, compl... 119 1e-23
21gb|AY050340.1| Arabidopsis thaliana AT5g40810/MHK7_4 mRNA, compl... 119 1e-23
22emb|BX829693.1|CNS0A056 Arabidopsis thaliana Full-length cDNA Co... 119 1e-23
23emb|X79597.1|STCYC1 S.tuberosum (Desiree) cyc1 II mRNA. for cyto... 119 1e-23
24emb|BX824810.1|CNS0A6Y4 Arabidopsis thaliana Full-length cDNA Co... 113 6e-22
25emb|X62124.1|STCYC1G S.tuberosum cycl gene encoding cytochrome c1 101 2e-18
26gb|L41695.1|PS300038E Eucalyptus globulus bicostata symbiont (F0... 88 3e-14
27gb|DQ294620.1| Arachis hypogaea cytochrome c1-like mRNA, partial... 82 2e-12
28dbj|AP000381.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 74 5e-10
29dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
30dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
31gb|S66866.1|S66866 Solanum tuberosum cytochrome c1 precursor, ge... 62 2e-06
32dbj|AB011477.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 60 8e-06
33gb|AC185524.1| Medicago truncatula clone mth2-62g23, complete se... 58 3e-05
34gb|AC138464.19| Medicago truncatula clone mth2-29i23, complete s... 58 3e-05
35emb|AL354853.12| Human DNA sequence from clone RP11-555F9 on chr... 44 0.45
36emb|AL844199.8| Mouse DNA sequence from clone RP23-39F22 on chro... 44 0.45
37gb|AC137924.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
38gb|AC123047.3| Mus musculus BAC clone RP24-378B22 from chromosom... 42 1.8
39emb|BX927158.14| Zebrafish DNA sequence from clone DKEY-106K1 in... 42 1.8
40gb|AE014823.1| Plasmodium falciparum 3D7 chromosome 14 section 8... 42 1.8
41emb|AL590503.11| Mouse DNA sequence from clone RP23-128M23 on ch... 42 1.8
42gb|AC021549.9| Homo sapiens chromosome 18, clone RP11-650P15, co... 42 1.8
43gb|CP000236.1| Ehrlichia chaffeensis str. Arkansas, complete genome 42 1.8
44gb|AC151841.5| Mus musculus BAC clone RP23-128P10 from chromosom... 42 1.8
45dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
46gb|AY177663.1| Homo sapiens desmoglein 4 preproprotein (DSG4) ge... 42 1.8
47dbj|AP003337.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
48dbj|AP003331.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
49dbj|AP003499.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 42 1.8
50gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
51emb|AL773525.5| Mouse DNA sequence from clone RP23-169L4 on chro... 42 1.8
52gb|AE017197.1| Rickettsia typhi str. Wilmington complete genome 40 7.1
53gb|AC137511.3| Mus musculus BAC clone RP24-313I8 from chromosome... 40 7.1
54gb|AC119158.10| Mus musculus chromosome 19, clone RP23-434C14, c... 40 7.1
55gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome 40 7.1
56emb|AL365444.11| Human DNA sequence from clone RP11-115P16 on ch... 40 7.1
57emb|AL133475.14| Human DNA sequence from clone RP3-357D13 on chr... 40 7.1
58ref|XM_961529.1| PREDICTED: Tribolium castaneum similar to CG992... 40 7.1
59gb|AC145218.29| Medicago truncatula clone mth2-34l18, complete s... 40 7.1
60gb|AC109821.5| Homo sapiens BAC clone RP11-509D19 from 4, comple... 40 7.1
61gb|AC095053.3| Homo sapiens BAC clone RP11-352E8 from 4, complet... 40 7.1
62gb|CP000235.1| Anaplasma phagocytophilum HZ, complete genome 40 7.1
63gb|AC008147.31| Homo sapiens 12 BAC RP3-405J10 (Roswell Park Can... 40 7.1
64dbj|AK024933.1| Homo sapiens cDNA: FLJ21280 fis, clone COL01884 40 7.1
65emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 40 7.1
66emb|AL133168.6|CNS01DU7 Human chromosome 14 DNA sequence BAC R-1... 40 7.1
67emb|AL669851.8| Mouse DNA sequence from clone RP23-18K13 on chro... 40 7.1

>gb|AY090551.1| Deschampsia antarctica clone Dacor 1.1 cytochrome c1 precursor
           mRNA, 3' UTR and partial cds
          Length = 418

 Score =  515 bits (260), Expect = e-143
 Identities = 369/404 (91%), Gaps = 1/404 (0%)
 Strand = Plus / Plus

                                                                       
Query: 27  ggagctattgagtatgaagatggtactcctgcaactgaagcccagatgggcaaggatgtc 86
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1   ggagctgttgagtatgaagatggtactcctgcaactgaagcccagatgggcaaggatgtt 60

                                                                       
Query: 87  gtgtcgttcttgtcgtgggcagctgagcctgaaatggaagagaggaaactgatgggtgtc 146
           ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gtgtcattcttgtcatgggcggctgagcctgaaatggaagagaggaaactgatgggtgtc 120

                                                                       
Query: 147 aaatggatcttcctactgtcacttgctcttctccaagccgcatactaccgtcgcatgagg 206
           |||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||
Sbjct: 121 aaatggatcttcctactgtcacttgcacttatccaagctgcatactaccgtcgcatgagg 180

                                                                       
Query: 207 tggtctgtcctcaagtcccgcaagctggtcctggacgtcgtcaactagtgaccattgttt 266
           ||||| ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||
Sbjct: 181 tggtcggtcctcaagtcccgcaagctggtcctggatgtcgtcaactgatgaccattgttt 240

                                                                       
Query: 267 cttctttctattgcaacatcgagtctttaagcagaagcgatcgaaataaggactttccgt 326
           ||||||| || | |||| | |||||||||||||||||| |||||||||| ||||||| ||
Sbjct: 241 cttctttttactacaacgttgagtctttaagcagaagctatcgaaataatgactttctgt 300

                                                                       
Query: 327 tgtatattttgctactctggttgtctcccatcataccttgggtacaatctcttttgtttt 386
           |||| ||||||| |||  |||||||||||||||| || ||  || ||| |||| ||||||
Sbjct: 301 tgtacattttgccactggggttgtctcccatcatcccctgcctagaatttcttctgtttt 360

                                                       
Query: 387 cttcctctgctgcaaaagcatttctcttaagggagcagttattt 430
           | || |||||||||||||||||||||  ||||||||||||||||
Sbjct: 361 cctcttctgctgcaaaagcatttctc-caagggagcagttattt 403



to top

>dbj|AK070578.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061F14, full
            insert sequence
          Length = 1367

 Score =  341 bits (172), Expect = 1e-90
 Identities = 236/256 (92%), Gaps = 1/256 (0%)
 Strand = Plus / Plus

                                                                        
Query: 15   atgcttatggatggagctattgagtatgaagatggtactcctgcaactgaagcccagatg 74
            |||||||| ||||||||| |||| |||||||||||||||||||| |||||||||||||||
Sbjct: 880  atgcttatagatggagctgttgaatatgaagatggtactcctgccactgaagcccagatg 939

                                                                        
Query: 75   ggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagagaggaaa 134
            |||||||||||||| ||||||||||| ||||||||||| ||||| |||||||||||||||
Sbjct: 940  ggcaaggatgtcgtttcgttcttgtcatgggcagctgaacctgagatggaagagaggaaa 999

                                                                        
Query: 135  ctgatgggtgtcaaatggatcttcctactgtcacttgctcttctccaagccgcatactac 194
            |||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1000 ctgatgggagtgaaatggatcttcctactgtcacttgcacttctccaagccgcatactac 1059

                                                                        
Query: 195  cgtcgcatgaggtggtctgtcctcaagtcccgcaagctggtcctggacgtcgtcaact-a 253
            ||||||||||||||||| ||||| ||||| |||||||||||||| || || ||||||| |
Sbjct: 1060 cgtcgcatgaggtggtccgtcctgaagtcacgcaagctggtccttgatgttgtcaactga 1119

                            
Query: 254  gtgaccattgtttctt 269
            | ||||| ||||||||
Sbjct: 1120 gggaccactgtttctt 1135



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                         
Query: 381  tgttttcttcctctgctgcaaaagcattt 409
            |||||||||||||||||||||||||||||
Sbjct: 1234 tgttttcttcctctgctgcaaaagcattt 1262



to top

>gb|BT016510.1| Zea mays clone Contig343 mRNA sequence
          Length = 1417

 Score =  268 bits (135), Expect = 2e-68
 Identities = 223/251 (88%), Gaps = 1/251 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2    gccatgcctaagcatgcttatggatggagctattgagtatgaagatggtactcctgcaac 61
            |||||||| ||| |||||||  ||||||||| |||||||||| |||||||| ||||||||
Sbjct: 785  gccatgccgaag-atgcttaatgatggagctgttgagtatgaggatggtacacctgcaac 843

                                                                        
Query: 62   tgaagcccagatgggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaat 121
            ||||||||||||||| ||||||||||| || ||| | |||||||||||||||||||| ||
Sbjct: 844  tgaagcccagatgggtaaggatgtcgtatcattcctttcgtgggcagctgagcctgagat 903

                                                                        
Query: 122  ggaagagaggaaactgatgggtgtcaaatggatcttcctactgtcacttgctcttctcca 181
            ||||||||| || |||||||| || ||||||||||| ||||| ||||| || ||||||||
Sbjct: 904  ggaagagagaaagctgatgggagtgaaatggatctttctactatcactagcgcttctcca 963

                                                                        
Query: 182  agccgcatactaccgtcgcatgaggtggtctgtcctcaagtcccgcaagctggtcctgga 241
            ||| || |||||||| |||||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 964  agctgcctactaccgccgcatgaggtggtcagtcctgaagtcccgaaagctggtcctgga 1023

                       
Query: 242  cgtcgtcaact 252
             ||||||||||
Sbjct: 1024 tgtcgtcaact 1034



to top

>gb|AY103572.1| Zea mays PCO092029 mRNA sequence
          Length = 1394

 Score =  240 bits (121), Expect = 4e-60
 Identities = 202/229 (88%)
 Strand = Plus / Plus

                                                                        
Query: 24   gatggagctattgagtatgaagatggtactcctgcaactgaagcccagatgggcaaggat 83
            ||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 850  gatggagctgttgagtatgaggatggtactcctgcaactgaagcccagatgggtaaggat 909

                                                                        
Query: 84   gtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagagaggaaactgatgggt 143
            || || || ||| | || ||||||||||||||||| ||||||||||| || |||||||| 
Sbjct: 910  gttgtatcattcctttcatgggcagctgagcctgagatggaagagagaaagctgatggga 969

                                                                        
Query: 144  gtcaaatggatcttcctactgtcacttgctcttctccaagccgcatactaccgtcgcatg 203
            || ||||||||||| ||||| ||||| || ||||| ||||| ||||||||||| ||||||
Sbjct: 970  gtgaaatggatctttctactatcactagcgcttcttcaagctgcatactaccgccgcatg 1029

                                                             
Query: 204  aggtggtctgtcctcaagtcccgcaagctggtcctggacgtcgtcaact 252
            |||||||| ||| | |||||||| |||||||||||||| || |||||||
Sbjct: 1030 aggtggtcagtcttgaagtcccgtaagctggtcctggatgttgtcaact 1078



to top

>gb|BT012926.1| Lycopersicon esculentum clone 114089R, mRNA sequence
          Length = 1382

 Score =  186 bits (94), Expect = 5e-44
 Identities = 202/238 (84%)
 Strand = Plus / Plus

                                                                        
Query: 15   atgcttatggatggagctattgagtatgaagatggtactcctgcaactgaagcccagatg 74
            |||||||  ||||| ||| ||||||||||||||||||  ||||||||||| || || |||
Sbjct: 893  atgcttaatgatggtgctgttgagtatgaagatggtatacctgcaactgaggcacaaatg 952

                                                                        
Query: 75   ggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagagaggaaa 134
            || || ||||| |||||||||||||| ||||| |||||||| |||||||||||||| || 
Sbjct: 953  ggaaaagatgttgtgtcgttcttgtcatgggctgctgagccagaaatggaagagagaaag 1012

                                                                        
Query: 135  ctgatgggtgtcaaatggatcttcctactgtcacttgctcttctccaagccgcatactac 194
            ||||||||| |||||||||| ||| |  | |||||||| ||||||||||| || ||||||
Sbjct: 1013 ctgatgggtttcaaatggatattcgtcttatcacttgcacttctccaagcagcttactac 1072

                                                                      
Query: 195  cgtcgcatgaggtggtctgtcctcaagtcccgcaagctggtcctggacgtcgtcaact 252
            |||||| |||| ||||||||||| || || |||||  ||||||| || || |||||||
Sbjct: 1073 cgtcgcctgagatggtctgtcctgaaatctcgcaaattggtcctcgatgttgtcaact 1130



to top

>ref|NM_190059.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 915

 Score =  176 bits (89), Expect = 5e-41
 Identities = 201/237 (84%), Gaps = 1/237 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   gccatgcctaagcatgcttatggatggagctattgagtatgaagatggtactcctgcaac 61
           |||||||| ||| |||||||| ||||||||  | |||||||||||||| ||||| || ||
Sbjct: 664 gccatgcccaag-atgcttattgatggagcagtcgagtatgaagatggcactccagctac 722

                                                                       
Query: 62  tgaagcccagatgggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaat 121
            |||||||||||||| || ||||| || ||||||||||| ||||| || |||||||| ||
Sbjct: 723 agaagcccagatgggaaaagatgttgtctcgttcttgtcatgggcggcggagcctgagat 782

                                                                       
Query: 122 ggaagagaggaaactgatgggtgtcaaatggatcttcctactgtcacttgctcttctcca 181
           ||||||||| ||||||||||| || |||||||| || ||||| || || || ||||| ||
Sbjct: 783 ggaagagagaaaactgatgggagtgaaatggatttttctactctccctcgcacttctgca 842

                                                                    
Query: 182 agccgcatactaccgtcgcatgaggtggtctgtcctcaagtcccgcaagctggtcct 238
           ||| ||||| ||||| ||||||| |||||| |||  |||||| ||||||||||||||
Sbjct: 843 agctgcatattaccggcgcatgaagtggtccgtctacaagtcgcgcaagctggtcct 899



to top

>dbj|AK069403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023013M20, full
            insert sequence
          Length = 1379

 Score =  176 bits (89), Expect = 5e-41
 Identities = 201/237 (84%), Gaps = 1/237 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2    gccatgcctaagcatgcttatggatggagctattgagtatgaagatggtactcctgcaac 61
            |||||||| ||| |||||||| ||||||||  | |||||||||||||| ||||| || ||
Sbjct: 812  gccatgcccaag-atgcttattgatggagcagtcgagtatgaagatggcactccagctac 870

                                                                        
Query: 62   tgaagcccagatgggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaat 121
             |||||||||||||| || ||||| || ||||||||||| ||||| || |||||||| ||
Sbjct: 871  agaagcccagatgggaaaagatgttgtctcgttcttgtcatgggcggcggagcctgagat 930

                                                                        
Query: 122  ggaagagaggaaactgatgggtgtcaaatggatcttcctactgtcacttgctcttctcca 181
            ||||||||| ||||||||||| || |||||||| || ||||| || || || ||||| ||
Sbjct: 931  ggaagagagaaaactgatgggagtgaaatggatttttctactctccctcgcacttctgca 990

                                                                     
Query: 182  agccgcatactaccgtcgcatgaggtggtctgtcctcaagtcccgcaagctggtcct 238
            ||| ||||| ||||| ||||||| |||||| |||  |||||| ||||||||||||||
Sbjct: 991  agctgcatattaccggcgcatgaagtggtccgtctacaagtcgcgcaagctggtcct 1047



to top

>gb|AY805120.1| Ornithogalum virens clone 3OvF39 putative cytochrome c1 precursor
           protein mRNA, partial cds
          Length = 923

 Score =  168 bits (85), Expect = 1e-38
 Identities = 187/221 (84%)
 Strand = Plus / Plus

                                                                       
Query: 15  atgcttatggatggagctattgagtatgaagatggtactcctgcaactgaagcccagatg 74
           |||||||| ||||||||| | ||||||||||||||||| |||||||||||||| ||||||
Sbjct: 319 atgcttatagatggagctttagagtatgaagatggtacccctgcaactgaagctcagatg 378

                                                                       
Query: 75  ggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagagaggaaa 134
           || ||||| ||||| || || || ||||||||||| ||||| || ||||||||| | |||
Sbjct: 379 gggaaggacgtcgtttcatttttatcgtgggcagcggagcccgagatggaagagcgcaaa 438

                                                                       
Query: 135 ctgatgggtgtcaaatggatcttcctactgtcacttgctcttctccaagccgcatactac 194
           ||||||||  |||||||||| ||| | || ||||| || || || ||||| | ||| |||
Sbjct: 439 ctgatgggattcaaatggattttcgtgctatcactggcgctccttcaagctggatattac 498

                                                    
Query: 195 cgtcgcatgaggtggtctgtcctcaagtcccgcaagctggt 235
           |||||  || ||||||||||| ||||||| |||||||||||
Sbjct: 499 cgtcgtttgcggtggtctgtcttcaagtcacgcaagctggt 539



to top

>gb|AC093953.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
             OJ1057_C01, complete sequence
          Length = 142752

 Score =  163 bits (82), Expect = 7e-37
 Identities = 122/134 (91%), Gaps = 1/134 (0%)
 Strand = Plus / Minus

                                                                         
Query: 137   gatgggtgtcaaatggatcttcctactgtcacttgctcttctccaagccgcatactaccg 196
             |||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 93428 gatgggagtgaaatggatcttcctactgtcacttgcacttctccaagccgcatactaccg 93369

                                                                         
Query: 197   tcgcatgaggtggtctgtcctcaagtcccgcaagctggtcctggacgtcgtcaact-agt 255
             ||||||||||||||| ||||| ||||| |||||||||||||| || || ||||||| || 
Sbjct: 93368 tcgcatgaggtggtccgtcctgaagtcacgcaagctggtccttgatgttgtcaactgagg 93309

                           
Query: 256   gaccattgtttctt 269
             ||||| ||||||||
Sbjct: 93308 gaccactgtttctt 93295



 Score =  105 bits (53), Expect = 1e-19
 Identities = 65/69 (94%)
 Strand = Plus / Minus

                                                                         
Query: 69    cagatgggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagag 128
             |||||||||||||||||||| ||||||||||| ||||||||||| ||||| |||||||||
Sbjct: 93580 cagatgggcaaggatgtcgtttcgttcttgtcatgggcagctgaacctgagatggaagag 93521

                      
Query: 129   aggaaactg 137
             |||||||||
Sbjct: 93520 aggaaactg 93512



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                      
Query: 15    atgcttatggatggagctattgagtatgaagatggtactcctgcaactgaagcccag 71
             |||||||| ||||||||| |||| |||||||||||||||||||| ||||||||||||
Sbjct: 93728 atgcttatagatggagctgttgaatatgaagatggtactcctgccactgaagcccag 93672



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                          
Query: 381   tgttttcttcctctgctgcaaaagcattt 409
             |||||||||||||||||||||||||||||
Sbjct: 93196 tgttttcttcctctgctgcaaaagcattt 93168



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 454   tacctgaatggtaccaacatacttctaacagaa 486
             |||||||||||||||| ||  ||||||||||||
Sbjct: 93133 tacctgaatggtaccagcaagcttctaacagaa 93101



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  163 bits (82), Expect = 7e-37
 Identities = 122/134 (91%), Gaps = 1/134 (0%)
 Strand = Plus / Minus

                                                                            
Query: 137      gatgggtgtcaaatggatcttcctactgtcacttgctcttctccaagccgcatactaccg 196
                |||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 13409965 gatgggagtgaaatggatcttcctactgtcacttgcacttctccaagccgcatactaccg 13409906

                                                                            
Query: 197      tcgcatgaggtggtctgtcctcaagtcccgcaagctggtcctggacgtcgtcaact-agt 255
                ||||||||||||||| ||||| ||||| |||||||||||||| || || ||||||| || 
Sbjct: 13409905 tcgcatgaggtggtccgtcctgaagtcacgcaagctggtccttgatgttgtcaactgagg 13409846

                              
Query: 256      gaccattgtttctt 269
                ||||| ||||||||
Sbjct: 13409845 gaccactgtttctt 13409832



 Score =  105 bits (53), Expect = 1e-19
 Identities = 65/69 (94%)
 Strand = Plus / Minus

                                                                            
Query: 69       cagatgggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagag 128
                |||||||||||||||||||| ||||||||||| ||||||||||| ||||| |||||||||
Sbjct: 13410117 cagatgggcaaggatgtcgtttcgttcttgtcatgggcagctgaacctgagatggaagag 13410058

                         
Query: 129      aggaaactg 137
                |||||||||
Sbjct: 13410057 aggaaactg 13410049



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                         
Query: 15       atgcttatggatggagctattgagtatgaagatggtactcctgcaactgaagcccag 71
                |||||||| ||||||||| |||| |||||||||||||||||||| ||||||||||||
Sbjct: 13410265 atgcttatagatggagctgttgaatatgaagatggtactcctgccactgaagcccag 13410209



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                             
Query: 381      tgttttcttcctctgctgcaaaagcattt 409
                |||||||||||||||||||||||||||||
Sbjct: 13409733 tgttttcttcctctgctgcaaaagcattt 13409705



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 454      tacctgaatggtaccaacatacttctaacagaa 486
                |||||||||||||||| ||  ||||||||||||
Sbjct: 13409670 tacctgaatggtaccagcaagcttctaacagaa 13409638



to top

>gb|AY088099.1| Arabidopsis thaliana clone 41320 mRNA, complete sequence
          Length = 1361

 Score =  147 bits (74), Expect = 4e-32
 Identities = 191/230 (83%)
 Strand = Plus / Plus

                                                                        
Query: 24   gatggagctattgagtatgaagatggtactcctgcaactgaagcccagatgggcaaggat 83
            |||| |||| |||||||||||||||||   || || || || || |||||||| || |||
Sbjct: 807  gatgaagctgttgagtatgaagatggtgtccccgccacagaggcacagatgggtaaagat 866

                                                                        
Query: 84   gtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagagaggaaactgatgggt 143
             | || || |||||| | ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 867  attgtatcattcttggcctgggcagctgaaccagaaatggaagagaggaaactgatgggt 926

                                                                        
Query: 144  gtcaaatggatcttcctactgtcacttgctcttctccaagccgcatactaccgtcgcatg 203
             |||||||||| |||||||| || || |||||||||||||| || |||||| | ||  ||
Sbjct: 927  ttcaaatggatattcctactctctctcgctcttctccaagctgcttactacaggcgactg 986

                                                              
Query: 204  aggtggtctgtcctcaagtcccgcaagctggtcctggacgtcgtcaacta 253
            |  ||||| || |||||||||||||||||||| || ||||| || |||||
Sbjct: 987  aaatggtcggttctcaagtcccgcaagctggttcttgacgtggttaacta 1036



to top

>ref|NM_113638.2| Arabidopsis thaliana electron transporter/ electron transporter,
            transferring electrons within CoQH2-cytochrome c
            reductase complex AT3G27240 mRNA, complete cds
          Length = 1414

 Score =  139 bits (70), Expect = 1e-29
 Identities = 190/230 (82%)
 Strand = Plus / Plus

                                                                        
Query: 24   gatggagctattgagtatgaagatggtactcctgcaactgaagcccagatgggcaaggat 83
            |||| |||| |||||||||||||||||   || || || || || |||||||| || |||
Sbjct: 829  gatgaagctgttgagtatgaagatggtgtccccgccacagaggcacagatgggtaaagat 888

                                                                        
Query: 84   gtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagagaggaaactgatgggt 143
             | || || |||||| | ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 889  attgtatcattcttggcctgggcagctgaaccagaaatggaagagaggaaactgatgggt 948

                                                                        
Query: 144  gtcaaatggatcttcctactgtcacttgctcttctccaagccgcatactaccgtcgcatg 203
             |||||||||| |||||||| || || |||||||||||||| || |||||| | ||  | 
Sbjct: 949  ttcaaatggatattcctactctctctcgctcttctccaagctgcttactacaggcgacta 1008

                                                              
Query: 204  aggtggtctgtcctcaagtcccgcaagctggtcctggacgtcgtcaacta 253
            |  ||||| || |||||||||||||||||||| || ||||| || |||||
Sbjct: 1009 aaatggtcggttctcaagtcccgcaagctggttcttgacgtggttaacta 1058



to top

>gb|AF458338.1|AF458338 Arabidopsis thaliana AT3g27240/K17E12_6 mRNA, complete cds
          Length = 924

 Score =  139 bits (70), Expect = 1e-29
 Identities = 190/230 (82%)
 Strand = Plus / Plus

                                                                       
Query: 24  gatggagctattgagtatgaagatggtactcctgcaactgaagcccagatgggcaaggat 83
           |||| |||| |||||||||||||||||   || || || || || |||||||| || |||
Sbjct: 694 gatgaagctgttgagtatgaagatggtgtccccgccacagaggcacagatgggtaaagat 753

                                                                       
Query: 84  gtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagagaggaaactgatgggt 143
            | || || |||||| | ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 754 attgtatcattcttggcctgggcagctgaaccagaaatggaagagaggaaactgatgggt 813

                                                                       
Query: 144 gtcaaatggatcttcctactgtcacttgctcttctccaagccgcatactaccgtcgcatg 203
            |||||||||| |||||||| || || |||||||||||||| || |||||| | ||  | 
Sbjct: 814 ttcaaatggatattcctactctctctcgctcttctccaagctgcttactacaggcgacta 873

                                                             
Query: 204 aggtggtctgtcctcaagtcccgcaagctggtcctggacgtcgtcaacta 253
           |  ||||| || |||||||||||||||||||| || ||||| || |||||
Sbjct: 874 aaatggtcggttctcaagtcccgcaagctggttcttgacgtggttaacta 923



to top

>gb|AY054246.1| Arabidopsis thaliana AT3g27240/K17E12_6 mRNA, complete cds
          Length = 1414

 Score =  139 bits (70), Expect = 1e-29
 Identities = 190/230 (82%)
 Strand = Plus / Plus

                                                                        
Query: 24   gatggagctattgagtatgaagatggtactcctgcaactgaagcccagatgggcaaggat 83
            |||| |||| |||||||||||||||||   || || || || || |||||||| || |||
Sbjct: 829  gatgaagctgttgagtatgaagatggtgtccccgccacagaggcacagatgggtaaagat 888

                                                                        
Query: 84   gtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagagaggaaactgatgggt 143
             | || || |||||| | ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 889  attgtatcattcttggcctgggcagctgaaccagaaatggaagagaggaaactgatgggt 948

                                                                        
Query: 144  gtcaaatggatcttcctactgtcacttgctcttctccaagccgcatactaccgtcgcatg 203
             |||||||||| |||||||| || || |||||||||||||| || |||||| | ||  | 
Sbjct: 949  ttcaaatggatattcctactctctctcgctcttctccaagctgcttactacaggcgacta 1008

                                                              
Query: 204  aggtggtctgtcctcaagtcccgcaagctggtcctggacgtcgtcaacta 253
            |  ||||| || |||||||||||||||||||| || ||||| || |||||
Sbjct: 1009 aaatggtcggttctcaagtcccgcaagctggttcttgacgtggttaacta 1058



to top

>emb|BX824887.1|CNS0A6WM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH80ZA02 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1297

 Score =  139 bits (70), Expect = 1e-29
 Identities = 190/230 (82%)
 Strand = Plus / Plus

                                                                        
Query: 24   gatggagctattgagtatgaagatggtactcctgcaactgaagcccagatgggcaaggat 83
            |||| |||| |||||||||||||||||   || || || || || |||||||| || |||
Sbjct: 778  gatgaagctgttgagtatgaagatggtgtccccgccacagaggcacagatgggtaaagat 837

                                                                        
Query: 84   gtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagagaggaaactgatgggt 143
             | || || |||||| | ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 838  attgtatcattcttggcctgggcagctgaaccagaaatggaagagaggaaactgatgggt 897

                                                                        
Query: 144  gtcaaatggatcttcctactgtcacttgctcttctccaagccgcatactaccgtcgcatg 203
             |||||||||| |||||||| || || |||||||||||||| || |||||| | ||  | 
Sbjct: 898  ttcaaatggatattcctactctctctcgctcttctccaagctgcttactacaggcgacta 957

                                                              
Query: 204  aggtggtctgtcctcaagtcccgcaagctggtcctggacgtcgtcaacta 253
            |  ||||| || |||||||||||||||||||| || ||||| || |||||
Sbjct: 958  aaatggtcggttctcaagtcccgcaagctggttcttgacgtggttaacta 1007



to top

>emb|BX824618.1|CNS0A4TF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH60ZA03 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1238

 Score =  139 bits (70), Expect = 1e-29
 Identities = 190/230 (82%)
 Strand = Plus / Plus

                                                                        
Query: 24   gatggagctattgagtatgaagatggtactcctgcaactgaagcccagatgggcaaggat 83
            |||| |||| |||||||||||||||||   || || || || || |||||||| || |||
Sbjct: 777  gatgaagctgttgagtatgaagatggtgtccccgccacagaggcacagatgggtaaagat 836

                                                                        
Query: 84   gtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagagaggaaactgatgggt 143
             | || || |||||| | ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 837  attgtatcattcttggcctgggcagctgaaccagaaatggaagagaggaaactgatgggt 896

                                                                        
Query: 144  gtcaaatggatcttcctactgtcacttgctcttctccaagccgcatactaccgtcgcatg 203
             |||||||||| |||||||| || || |||||||||||||| || |||||| | ||  | 
Sbjct: 897  ttcaaatggatattcctactctctctcgctcttctccaagctgcttactacaggcgacta 956

                                                              
Query: 204  aggtggtctgtcctcaagtcccgcaagctggtcctggacgtcgtcaacta 253
            |  ||||| || |||||||||||||||||||| || ||||| || |||||
Sbjct: 957  aaatggtcggttctcaagtcccgcaagctggttcttgacgtggttaacta 1006



to top

>emb|BX823783.1|CNS0A6LU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS75ZC04 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1366

 Score =  131 bits (66), Expect = 3e-27
 Identities = 189/230 (82%)
 Strand = Plus / Plus

                                                                        
Query: 24   gatggagctattgagtatgaagatggtactcctgcaactgaagcccagatgggcaaggat 83
            |||| |||| |||||||||||||||||   || || || || || |||||||| || |||
Sbjct: 795  gatgaagctgttgagtatgaagatggtgtccccgccacagaggcacagatgggtaaagat 854

                                                                        
Query: 84   gtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagagaggaaactgatgggt 143
             | || || |||||  | ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 855  attgtatcattcttcgcctgggcagctgaaccagaaatggaagagaggaaactgatgggt 914

                                                                        
Query: 144  gtcaaatggatcttcctactgtcacttgctcttctccaagccgcatactaccgtcgcatg 203
             |||||||||| |||||||| || || |||||||||||||| || |||||| | ||  | 
Sbjct: 915  ctcaaatggatattcctactctctctcgctcttctccaagctgcttactacaggcgacta 974

                                                              
Query: 204  aggtggtctgtcctcaagtcccgcaagctggtcctggacgtcgtcaacta 253
            |  ||||| || |||||||||||||||||||| || ||||| || |||||
Sbjct: 975  aaatggtcggttctcaagtcccgcaagctggttcttgacgtggttaacta 1024



to top

>gb|BT014041.1| Lycopersicon esculentum clone 133106F, mRNA sequence
          Length = 1437

 Score =  127 bits (64), Expect = 4e-26
 Identities = 184/224 (82%)
 Strand = Plus / Plus

                                                                        
Query: 15   atgcttatggatggagctattgagtatgaagatggtactcctgcaactgaagcccagatg 74
            |||||||  ||||| ||| |||||||||||||||||   |||||||| ||||| ||||||
Sbjct: 843  atgcttaatgatggtgctgttgagtatgaagatggtgtccctgcaacagaagctcagatg 902

                                                                        
Query: 75   ggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagagaggaaa 134
            || || ||||| ||||| || ||  | ||||| ||||| || |||||||||||||| |||
Sbjct: 903  gggaaagatgtggtgtcatttttaacttgggctgctgaaccagaaatggaagagagaaaa 962

                                                                        
Query: 135  ctgatgggtgtcaaatggatcttcctactgtcacttgctcttctccaagccgcatactac 194
            ||||||||  |||| ||||| ||  ||||||| ||||| || || ||||| || ||||||
Sbjct: 963  ctgatgggcttcaagtggatatttgtactgtcccttgcactgcttcaagctgcttactac 1022

                                                        
Query: 195  cgtcgcatgaggtggtctgtcctcaagtcccgcaagctggtcct 238
             | ||  ||||||||||||| |||||||| || |||||||||||
Sbjct: 1023 aggcgtttgaggtggtctgttctcaagtcacgtaagctggtcct 1066



to top

>ref|NM_123446.3| Arabidopsis thaliana electron transporter/ electron transporter,
           transferring electrons within CoQH2-cytochrome c
           reductase complex AT5G40810 mRNA, complete cds
          Length = 1366

 Score =  119 bits (60), Expect = 1e-23
 Identities = 111/128 (86%)
 Strand = Plus / Plus

                                                                       
Query: 39  tatgaagatggtactcctgcaactgaagcccagatgggcaaggatgtcgtgtcgttcttg 98
           ||||||||||| ||||||||||| ||||| |||||||| || ||||| || || ||||||
Sbjct: 834 tatgaagatggaactcctgcaacagaagcacagatgggtaaagatgttgtatccttcttg 893

                                                                       
Query: 99  tcgtgggcagctgagcctgaaatggaagagaggaaactgatgggtgtcaaatggatcttc 158
           || ||||||||||| || || ||||||||||||||| |||||||  |||||||||| |||
Sbjct: 894 tcctgggcagctgaaccagagatggaagagaggaaattgatggggttcaaatggatattc 953

                   
Query: 159 ctactgtc 166
            |||||||
Sbjct: 954 ttactgtc 961



to top

>gb|AY116937.1| Arabidopsis thaliana AT5g40810/MHK7_4 mRNA, complete cds
          Length = 924

 Score =  119 bits (60), Expect = 1e-23
 Identities = 111/128 (86%)
 Strand = Plus / Plus

                                                                       
Query: 39  tatgaagatggtactcctgcaactgaagcccagatgggcaaggatgtcgtgtcgttcttg 98
           ||||||||||| ||||||||||| ||||| |||||||| || ||||| || || ||||||
Sbjct: 709 tatgaagatggaactcctgcaacagaagcacagatgggtaaagatgttgtatccttcttg 768

                                                                       
Query: 99  tcgtgggcagctgagcctgaaatggaagagaggaaactgatgggtgtcaaatggatcttc 158
           || ||||||||||| || || ||||||||||||||| |||||||  |||||||||| |||
Sbjct: 769 tcctgggcagctgaaccagagatggaagagaggaaattgatggggttcaaatggatattc 828

                   
Query: 159 ctactgtc 166
            |||||||
Sbjct: 829 ttactgtc 836



to top

>gb|AY050340.1| Arabidopsis thaliana AT5g40810/MHK7_4 mRNA, complete cds
          Length = 1238

 Score =  119 bits (60), Expect = 1e-23
 Identities = 111/128 (86%)
 Strand = Plus / Plus

                                                                       
Query: 39  tatgaagatggtactcctgcaactgaagcccagatgggcaaggatgtcgtgtcgttcttg 98
           ||||||||||| ||||||||||| ||||| |||||||| || ||||| || || ||||||
Sbjct: 781 tatgaagatggaactcctgcaacagaagcacagatgggtaaagatgttgtatccttcttg 840

                                                                       
Query: 99  tcgtgggcagctgagcctgaaatggaagagaggaaactgatgggtgtcaaatggatcttc 158
           || ||||||||||| || || ||||||||||||||| |||||||  |||||||||| |||
Sbjct: 841 tcctgggcagctgaaccagagatggaagagaggaaattgatggggttcaaatggatattc 900

                   
Query: 159 ctactgtc 166
            |||||||
Sbjct: 901 ttactgtc 908



to top

>emb|BX829693.1|CNS0A056 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB2ZE01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1241

 Score =  119 bits (60), Expect = 1e-23
 Identities = 111/128 (86%)
 Strand = Plus / Plus

                                                                       
Query: 39  tatgaagatggtactcctgcaactgaagcccagatgggcaaggatgtcgtgtcgttcttg 98
           ||||||||||| ||||||||||| ||||| |||||||| || ||||| || || ||||||
Sbjct: 834 tatgaagatggaactcctgcaacagaagcacagatgggtaaagatgttgtatccttcttg 893

                                                                       
Query: 99  tcgtgggcagctgagcctgaaatggaagagaggaaactgatgggtgtcaaatggatcttc 158
           || ||||||||||| || || ||||||||||||||| |||||||  |||||||||| |||
Sbjct: 894 tcctgggcagctgaaccagagatggaagagaggaaattgatggggttcaaatggatattc 953

                   
Query: 159 ctactgtc 166
            |||||||
Sbjct: 954 ttactgtc 961



to top

>emb|X79597.1|STCYC1 S.tuberosum (Desiree) cyc1 II mRNA. for cytochrome c1
          Length = 1014

 Score =  119 bits (60), Expect = 1e-23
 Identities = 183/224 (81%)
 Strand = Plus / Plus

                                                                       
Query: 15  atgcttatggatggagctattgagtatgaagatggtactcctgcaactgaagcccagatg 74
           |||||||  ||||| ||| |||||||||||||||||   |||||||| ||||| ||||||
Sbjct: 546 atgcttaatgatggtgctgttgagtatgaagatggtgtccctgcaacagaagctcagatg 605

                                                                       
Query: 75  ggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagagaggaaa 134
           || || ||||| ||||| || ||  | ||||| ||||| || || ||||||||||| |||
Sbjct: 606 gggaaagatgtggtgtcatttttaacttgggctgctgaaccagagatggaagagagaaaa 665

                                                                       
Query: 135 ctgatgggtgtcaaatggatcttcctactgtcacttgctcttctccaagccgcatactac 194
           ||||||||  |||| ||||| ||  ||||||| ||||| || || ||||| || ||||||
Sbjct: 666 ctgatgggcttcaagtggatatttgtactgtcccttgcactacttcaagctgcttactac 725

                                                       
Query: 195 cgtcgcatgaggtggtctgtcctcaagtcccgcaagctggtcct 238
            | ||  ||||||||||||| |||||||| || |||||||||||
Sbjct: 726 aggcgtttgaggtggtctgttctcaagtcacggaagctggtcct 769



to top

>emb|BX824810.1|CNS0A6Y4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH74ZE04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1267

 Score =  113 bits (57), Expect = 6e-22
 Identities = 181/221 (81%), Gaps = 1/221 (0%)
 Strand = Plus / Plus

                                                                       
Query: 34  ttgagtatgaagatggtactcctgcaactgaagcccagatgggcaaggatgtcgtgtcgt 93
           |||||||||||||||||   || || || || || |||||||| || ||| | || || |
Sbjct: 762 ttgagtatgaagatggtgtccccgccacagaggcacagatgggtaaagatattgtatcat 821

                                                                       
Query: 94  tcttgtcgtgggcagctgagcctgaaatggaagagaggaaactga-tgggtgtcaaatgg 152
           ||||| | ||||||||||| || |||||||||||||||||||||| ||||| ||||||||
Sbjct: 822 tcttggcctgggcagctgaaccagaaatggaagagaggaaactgattgggtttcaaatgg 881

                                                                       
Query: 153 atcttcctactgtcacttgctcttctccaagccgcatactaccgtcgcatgaggtggtct 212
           || |||||||| |  || |||||||||||||| || |||||| | ||  | |  ||||| 
Sbjct: 882 atattcctactatatctcgctcttctccaagctgcttactacaggcgactaaaatggtcg 941

                                                    
Query: 213 gtcctcaagtcccgcaagctggtcctggacgtcgtcaacta 253
           || |||||||||||||||||||| || ||||| || |||||
Sbjct: 942 gttctcaagtcccgcaagctggttcttgacgtggttaacta 982



to top

>emb|X62124.1|STCYC1G S.tuberosum cycl gene encoding cytochrome c1
          Length = 1264

 Score =  101 bits (51), Expect = 2e-18
 Identities = 177/219 (80%)
 Strand = Plus / Plus

                                                                        
Query: 34   ttgagtatgaagatggtactcctgcaactgaagcccagatgggcaaggatgtcgtgtcgt 93
            |||||||||| ||||| |  |||||||| || || |||||||| || ||||| || || |
Sbjct: 855  ttgagtatgaggatggcatccctgcaaccgaggcacagatgggaaaagatgttgtctcat 914

                                                                        
Query: 94   tcttgtcgtgggcagctgagcctgaaatggaagagaggaaactgatgggtgtcaaatgga 153
            ||||||| ||||| || ||||| || ||||||||||| || ||||||||| |||||||||
Sbjct: 915  tcttgtcctgggctgcggagccagagatggaagagagaaagctgatgggtttcaaatgga 974

                                                                        
Query: 154  tcttcctactgtcacttgctcttctccaagccgcatactaccgtcgcatgaggtggtctg 213
            | ||  |  | || || || ||||||||||| || |||||||| ||  |||| |||||||
Sbjct: 975  tatttgttttatctctcgcacttctccaagcagcttactaccgccgtttgagatggtctg 1034

                                                   
Query: 214  tcctcaagtcccgcaagctggtcctggacgtcgtcaact 252
            ||||||| || |||||| |||| || || || |||||||
Sbjct: 1035 tcctcaaatctcgcaagttggttcttgatgttgtcaact 1073



to top

>gb|L41695.1|PS300038E Eucalyptus globulus bicostata symbiont (F00060) mRNA, ESTun038
          Length = 330

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 116/140 (82%)
 Strand = Plus / Plus

                                                                       
Query: 15  atgcttatggatggagctattgagtatgaagatggtactcctgcaactgaagcccagatg 74
           |||||||| ||||| ||| | |||||||||||||| || || ||||| ||||| ||||||
Sbjct: 94  atgcttattgatggtgctgtcgagtatgaagatgggaccccagcaacagaagctcagatg 153

                                                                       
Query: 75  ggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagagaggaaa 134
           || || ||||||||  | ||||| || ||||| || || |||||||||||||| || || 
Sbjct: 154 gggaaagatgtcgtaacattcttatcatgggctgcagaacctgaaatggaagaaagaaag 213

                               
Query: 135 ctgatgggtgtcaaatggat 154
           ||||||||  ||||||||||
Sbjct: 214 ctgatgggattcaaatggat 233



to top

>gb|DQ294620.1| Arachis hypogaea cytochrome c1-like mRNA, partial sequence
          Length = 615

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 117/141 (82%), Gaps = 1/141 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   gccatgcctaagcatgcttatggatggagctattgagtatgaagatggtactcctgcaac 61
           |||||||||||  |||||||  ||||| ||| |||| ||||| ||||||||||| || ||
Sbjct: 367 gccatgcctaaa-atgcttaacgatggtgctgttgaatatgaggatggtactcccgccac 425

                                                                       
Query: 62  tgaagcccagatgggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaat 121
           |||| | |||||||| || ||||| ||||| ||||| || ||||| || || || || ||
Sbjct: 426 tgaatctcagatggggaaagatgttgtgtcattcttatcttgggctgccgaaccggagat 485

                                
Query: 122 ggaagagaggaaactgatggg 142
           ||||||||| |||||||||||
Sbjct: 486 ggaagagagaaaactgatggg 506



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                       
Query: 189 tactaccgtcgcatgaggtggtctgtcctcaagtcccgcaagctggtcctggacgtcgtc 248
           |||||||||||| | ||||||||||| || ||||| ||||||||||| || || ||||||
Sbjct: 553 tactaccgtcgccttaggtggtctgttctaaagtctcgcaagctggttcttgatgtcgtc 612

             
Query: 249 aa 250
           ||
Sbjct: 613 aa 614



to top

>dbj|AP000381.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K17E12
          Length = 63604

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 97/117 (82%)
 Strand = Plus / Minus

                                                                         
Query: 137   gatgggtgtcaaatggatcttcctactgtcacttgctcttctccaagccgcatactaccg 196
             ||||||| |||||||||| |||||||| || || |||||||||||||| || |||||| |
Sbjct: 20130 gatgggtttcaaatggatattcctactctctctcgctcttctccaagctgcttactacag 20071

                                                                      
Query: 197   tcgcatgaggtggtctgtcctcaagtcccgcaagctggtcctggacgtcgtcaacta 253
              ||  | |  ||||| || |||||||||||||||||||| || ||||| || |||||
Sbjct: 20070 gcgactaaaatggtcggttctcaagtcccgcaagctggttcttgacgtggttaacta 20014



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                          
Query: 93    ttcttgtcgtgggcagctgagcctgaaatggaagagaggaaactg 137
             |||||| | ||||||||||| || |||||||||||||||||||||
Sbjct: 20472 ttcttggcctgggcagctgaaccagaaatggaagagaggaaactg 20428



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 85/102 (83%)
 Strand = Plus / Plus

                                                                            
Query: 137      gatgggtgtcaaatggatcttcctactgtcacttgctcttctccaagccgcatactaccg 196
                |||||| || |||||||| || ||||| || || || ||||| ||||| ||||| |||||
Sbjct: 41071188 gatgggagtgaaatggatttttctactctccctcgcacttctgcaagctgcatattaccg 41071247

                                                          
Query: 197      tcgcatgaggtggtctgtcctcaagtcccgcaagctggtcct 238
                 ||||||| |||||| |||  |||||| ||||||||||||||
Sbjct: 41071248 gcgcatgaagtggtccgtctacaagtcgcgcaagctggtcct 41071289



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                            
Query: 70       agatgggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagaga 129
                ||||||| || ||||| || ||||||||||| ||||| || |||||||| ||||||||||
Sbjct: 41071037 agatgggaaaagatgttgtctcgttcttgtcatgggcggcggagcctgagatggaagaga 41071096

                        
Query: 130      ggaaactg 137
                | ||||||
Sbjct: 41071097 gaaaactg 41071104



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 60/70 (85%), Gaps = 1/70 (1%)
 Strand = Plus / Plus

                                                                            
Query: 2        gccatgcctaagcatgcttatggatggagctattgagtatgaagatggtactcctgcaac 61
                |||||||| ||| |||||||| ||||||||  | |||||||||||||| ||||| || ||
Sbjct: 41070874 gccatgcccaag-atgcttattgatggagcagtcgagtatgaagatggcactccagctac 41070932

                          
Query: 62       tgaagcccag 71
                 |||||||||
Sbjct: 41070933 agaagcccag 41070942



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 356      atcataccttgggtacaatct 376
                |||||||||||||||||||||
Sbjct: 13388389 atcataccttgggtacaatct 13388369



to top

>dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0492G09
          Length = 142239

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 85/102 (83%)
 Strand = Plus / Plus

                                                                          
Query: 137    gatgggtgtcaaatggatcttcctactgtcacttgctcttctccaagccgcatactaccg 196
              |||||| || |||||||| || ||||| || || || ||||| ||||| ||||| |||||
Sbjct: 108118 gatgggagtgaaatggatttttctactctccctcgcacttctgcaagctgcatattaccg 108177

                                                        
Query: 197    tcgcatgaggtggtctgtcctcaagtcccgcaagctggtcct 238
               ||||||| |||||| |||  |||||| ||||||||||||||
Sbjct: 108178 gcgcatgaagtggtccgtctacaagtcgcgcaagctggtcct 108219



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                          
Query: 70     agatgggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagaga 129
              ||||||| || ||||| || ||||||||||| ||||| || |||||||| ||||||||||
Sbjct: 107967 agatgggaaaagatgttgtctcgttcttgtcatgggcggcggagcctgagatggaagaga 108026

                      
Query: 130    ggaaactg 137
              | ||||||
Sbjct: 108027 gaaaactg 108034



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 60/70 (85%), Gaps = 1/70 (1%)
 Strand = Plus / Plus

                                                                          
Query: 2      gccatgcctaagcatgcttatggatggagctattgagtatgaagatggtactcctgcaac 61
              |||||||| ||| |||||||| ||||||||  | |||||||||||||| ||||| || ||
Sbjct: 107804 gccatgcccaag-atgcttattgatggagcagtcgagtatgaagatggcactccagctac 107862

                        
Query: 62     tgaagcccag 71
               |||||||||
Sbjct: 107863 agaagcccag 107872



to top

>gb|S66866.1|S66866 Solanum tuberosum cytochrome c1 precursor, gene, complete cds;
            mitochondrial gene for mitochondrial product
          Length = 6007

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 67/79 (84%)
 Strand = Plus / Plus

                                                                        
Query: 174  cttctccaagccgcatactaccgtcgcatgaggtggtctgtcctcaagtcccgcaagctg 233
            ||||||||||| || |||||||| ||  |||| |||||||||||||| || |||||| ||
Sbjct: 5463 cttctccaagcagcttactaccgccgtttgagatggtctgtcctcaaatctcgcaagttg 5522

                               
Query: 234  gtcctggacgtcgtcaact 252
            ||||| || || |||||||
Sbjct: 5523 gtccttgatgttgtcaact 5541



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 72   atgggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagagag 130
            ||||| || ||||| || || |||||||| ||||| |||||||| || |||||||||||
Sbjct: 5058 atgggaaaagatgttgtctcattcttgtcatgggctgctgagccagagatggaagagag 5116



to top

>dbj|AB011477.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MHK7
          Length = 78181

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                         
Query: 69    cagatgggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagag 128
             |||||||| || ||||| || || |||||||| ||||||||||| || || |||||||||
Sbjct: 16113 cagatgggtaaagatgttgtatccttcttgtcctgggcagctgaaccagagatggaagag 16172

                   
Query: 129   aggaaa 134
             ||||||
Sbjct: 16173 aggaaa 16178



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 39    tatgaagatggtactcctgcaactgaagc 67
             ||||||||||| ||||||||||| |||||
Sbjct: 15963 tatgaagatggaactcctgcaacagaagc 15991



to top

>gb|AC185524.1| Medicago truncatula clone mth2-62g23, complete sequence
          Length = 40651

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                         
Query: 69    cagatgggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagag 128
             |||||||| || ||||| ||||| || ||||| |||||||| || ||||| |||||||||
Sbjct: 10454 cagatggggaaagatgttgtgtcatttttgtcttgggcagcggaacctgagatggaagag 10513

                      
Query: 129   aggaaactg 137
             || ||||||
Sbjct: 10514 agaaaactg 10522



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 57/66 (86%), Gaps = 1/66 (1%)
 Strand = Plus / Plus

                                                                         
Query: 2     gccatgcctaagcatgcttatggatggagctattgagtatgaagatggtactcctgcaac 61
             |||||||||||| |||||||  ||||| ||| |||| |||||||||||||| ||||| ||
Sbjct: 10275 gccatgcctaag-atgcttaatgatggcgctgttgaatatgaagatggtacccctgctac 10333

                   
Query: 62    tgaagc 67
              |||||
Sbjct: 10334 cgaagc 10339



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 62/75 (82%)
 Strand = Plus / Plus

                                                                         
Query: 180   caagccgcatactaccgtcgcatgaggtggtctgtcctcaagtcccgcaagctggtcctg 239
             |||||||||||||| |||||  |  |||||||||| || ||||| |||||| |||| || 
Sbjct: 10646 caagccgcatactatcgtcgtcttcggtggtctgttcttaagtctcgcaagttggttctt 10705

                            
Query: 240   gacgtcgtcaactag 254
             || || |||||||||
Sbjct: 10706 gatgttgtcaactag 10720



to top

>gb|AC138464.19| Medicago truncatula clone mth2-29i23, complete sequence
          Length = 134105

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                          
Query: 69     cagatgggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagag 128
              |||||||| || ||||| ||||| || ||||| |||||||| || ||||| |||||||||
Sbjct: 106846 cagatggggaaagatgttgtgtcatttttgtcttgggcagcggaacctgagatggaagag 106905

                       
Query: 129    aggaaactg 137
              || ||||||
Sbjct: 106906 agaaaactg 106914



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                         
Query: 69    cagatgggcaaggatgtcgtgtcgttcttgtcgtgggcagctgagcctgaaatggaagag 128
             |||||||| || ||||| ||||| || ||||| |||||||| || ||||| |||||||||
Sbjct: 78037 cagatggggaaagatgttgtgtcatttttgtcttgggcagcagaacctgagatggaagag 78096

                      
Query: 129   aggaaactg 137
             || ||||||
Sbjct: 78097 agaaaactg 78105



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 57/66 (86%), Gaps = 1/66 (1%)
 Strand = Plus / Plus

                                                                          
Query: 2      gccatgcctaagcatgcttatggatggagctattgagtatgaagatggtactcctgcaac 61
              |||||||||||| |||||||  ||||| ||| |||| |||||||||||||| ||||| ||
Sbjct: 106667 gccatgcctaag-atgcttaatgatggcgctgttgaatatgaagatggtacccctgctac 106725

                    
Query: 62     tgaagc 67
               |||||
Sbjct: 106726 cgaagc 106731



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 62/75 (82%)
 Strand = Plus / Plus

                                                                          
Query: 180    caagccgcatactaccgtcgcatgaggtggtctgtcctcaagtcccgcaagctggtcctg 239
              |||||||||||||| |||||  |  |||||||||| || ||||| |||||| |||| || 
Sbjct: 107038 caagccgcatactatcgtcgtcttcggtggtctgttcttaagtctcgcaagttggttctt 107097

                             
Query: 240    gacgtcgtcaactag 254
              || || |||||||||
Sbjct: 107098 gatgttgtcaactag 107112



to top

>emb|AL354853.12| Human DNA sequence from clone RP11-555F9 on chromosome 9q22.1-22.33
             Contains the 5' end of a novel gene and the 3' end of a
             novel gene, complete sequence
          Length = 176422

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 374   tctcttttgttttcttcctctg 395
             ||||||||||||||||||||||
Sbjct: 83099 tctcttttgttttcttcctctg 83078



to top

>emb|AL844199.8| Mouse DNA sequence from clone RP23-39F22 on chromosome 4, complete
             sequence
          Length = 205589

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 108   gctgagcctgaaatggaagagaggaaactgatgg 141
             |||||| |||||||||||  ||||||||||||||
Sbjct: 36878 gctgagactgaaatggaaatgaggaaactgatgg 36911



to top

>gb|AC137924.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0095K08, complete sequence
          Length = 180999

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 356   atcataccttgggtacaatct 376
             |||||||||||||||||||||
Sbjct: 84537 atcataccttgggtacaatct 84517



to top

>gb|AC123047.3| Mus musculus BAC clone RP24-378B22 from chromosome 7, complete sequence
          Length = 157795

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 126   gagaggaaactgatgggtgtc 146
             |||||||||||||||||||||
Sbjct: 66559 gagaggaaactgatgggtgtc 66539



to top

>emb|BX927158.14| Zebrafish DNA sequence from clone DKEY-106K1 in linkage group 5,
             complete sequence
          Length = 144909

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 344   tggttgtctcccatcataccttggg 368
             |||| ||||||||||||||||||||
Sbjct: 34603 tggtggtctcccatcataccttggg 34579



to top

>gb|AE014823.1| Plasmodium falciparum 3D7 chromosome 14 section 8 of 13 of the complete
              sequence
          Length = 249943

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 373    atctcttttgttttcttcctc 393
              |||||||||||||||||||||
Sbjct: 186991 atctcttttgttttcttcctc 186971



to top

>emb|AL590503.11| Mouse DNA sequence from clone RP23-128M23 on chromosome 13, complete
              sequence
          Length = 169547

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 145    tcaaatggatcttcctactgt 165
              |||||||||||||||||||||
Sbjct: 112358 tcaaatggatcttcctactgt 112378



to top

>gb|AC021549.9| Homo sapiens chromosome 18, clone RP11-650P15, complete sequence
          Length = 183066

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 115    ctgaaatggaagagaggaaac 135
              |||||||||||||||||||||
Sbjct: 103592 ctgaaatggaagagaggaaac 103612



to top

>gb|CP000236.1| Ehrlichia chaffeensis str. Arkansas, complete genome
          Length = 1176248

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 101    gtgggcagctgagcctgaaatggaa 125
              |||||||||||||||||| ||||||
Sbjct: 522260 gtgggcagctgagcctgagatggaa 522284



to top

>gb|AC151841.5| Mus musculus BAC clone RP23-128P10 from chromosome 7, complete sequence
          Length = 212484

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 126   gagaggaaactgatgggtgtc 146
             |||||||||||||||||||||
Sbjct: 15264 gagaggaaactgatgggtgtc 15284



to top

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 356     atcataccttgggtacaatct 376
               |||||||||||||||||||||
Sbjct: 7913411 atcataccttgggtacaatct 7913431



to top

>gb|AY177663.1| Homo sapiens desmoglein 4 preproprotein (DSG4) gene, complete cds
          Length = 37140

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 115   ctgaaatggaagagaggaaac 135
             |||||||||||||||||||||
Sbjct: 29300 ctgaaatggaagagaggaaac 29280



to top

>dbj|AP003337.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1111_G12
          Length = 112664

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 356   atcataccttgggtacaatct 376
             |||||||||||||||||||||
Sbjct: 32942 atcataccttgggtacaatct 32922



to top

>dbj|AP003331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1088D01
          Length = 146144

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 356    atcataccttgggtacaatct 376
              |||||||||||||||||||||
Sbjct: 128747 atcataccttgggtacaatct 128727



to top

>dbj|AP003499.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-178H8, complete
             sequence
          Length = 193227

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 258   ccattgtttcttctttctatt 278
             |||||||||||||||||||||
Sbjct: 31087 ccattgtttcttctttctatt 31107



to top

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 356     atcataccttgggtacaatct 376
               |||||||||||||||||||||
Sbjct: 7983498 atcataccttgggtacaatct 7983518



to top

>emb|AL773525.5| Mouse DNA sequence from clone RP23-169L4 on chromosome 2, complete
              sequence
          Length = 188772

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 109    ctgagcctgaaatggaagagaggaa 133
              ||||||||||||||| |||||||||
Sbjct: 154647 ctgagcctgaaatgggagagaggaa 154671



to top

>gb|AE017197.1| Rickettsia typhi str. Wilmington complete genome
          Length = 1111496

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 102    tgggcagctgagcctgaaatggaa 125
              |||||||||||||| |||||||||
Sbjct: 332057 tgggcagctgagccggaaatggaa 332080



to top

>gb|AC137511.3| Mus musculus BAC clone RP24-313I8 from chromosome 5, complete sequence
          Length = 168197

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 121    tggaagagaggaaactgatgggtg 144
              ||||||||||||||||||| ||||
Sbjct: 123518 tggaagagaggaaactgatcggtg 123541



to top

>gb|AC119158.10| Mus musculus chromosome 19, clone RP23-434C14, complete sequence
          Length = 209459

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 374    tctcttttgttttcttcctctgct 397
              ||||||| ||||||||||||||||
Sbjct: 187567 tctctttagttttcttcctctgct 187590



to top

>gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome
          Length = 1485148

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 102     tgggcagctgagcctgaaatggaa 125
               |||||||||||||| |||||||||
Sbjct: 1068537 tgggcagctgagccagaaatggaa 1068514



to top

>emb|AL365444.11| Human DNA sequence from clone RP11-115P16 on chromosome 1 Contains the 3'
              UTR of a novel gene (DKFZp761P211), the ITPKB gene for
              inositol 1,4,5-trisphosphate 3-kinase B, two novel genes, a
              ribosomal protein S27 (metallopanstimulin 1) (RPS27)
              pseudogene and a CpG island, complete sequence
          Length = 181144

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 206    gtggtctgtcctcaagtccc 225
              ||||||||||||||||||||
Sbjct: 144686 gtggtctgtcctcaagtccc 144667



to top

>emb|AL133475.14| Human DNA sequence from clone RP3-357D13 on chromosome 6 Contains the
             5' end of the ELOVL4 gene for elongation of very long
             chain fatty acids (FEN1/ELo2, SUR4/ELo3, yeast)-like 4, a
             GAPD (glyceraldehyde-3-phosphate dehydrogenase)
             pseudogene, an RPL35A (60S ribosomal protein L35A)
             pseudogene, the TTK gene for TTK protein kinase and a
             putative CpG island, complete sequence
          Length = 119318

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 326   ttgtatattttgctactctg 345
             ||||||||||||||||||||
Sbjct: 52518 ttgtatattttgctactctg 52499



to top

>ref|XM_961529.1| PREDICTED: Tribolium castaneum similar to CG9924-PC, isoform C
           (LOC655033), mRNA
          Length = 1563

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 116 tgaaatggaagagaggaaac 135
           ||||||||||||||||||||
Sbjct: 918 tgaaatggaagagaggaaac 937



to top

>gb|AC145218.29| Medicago truncatula clone mth2-34l18, complete sequence
          Length = 134519

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   ttcttctttctattgcaaca 284
             ||||||||||||||||||||
Sbjct: 18098 ttcttctttctattgcaaca 18079



to top

>gb|AC109821.5| Homo sapiens BAC clone RP11-509D19 from 4, complete sequence
          Length = 106123

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 341   ctctggttgtctcccatcat 360
             ||||||||||||||||||||
Sbjct: 20747 ctctggttgtctcccatcat 20728



to top

>gb|AC095053.3| Homo sapiens BAC clone RP11-352E8 from 4, complete sequence
          Length = 112123

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    ctgcaactgaagcccagatg 74
             ||||||||||||||||||||
Sbjct: 20691 ctgcaactgaagcccagatg 20710



to top

>gb|CP000235.1| Anaplasma phagocytophilum HZ, complete genome
          Length = 1471282

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 101    gtgggcagctgagcctgaaatgga 124
              |||||| |||||||||||||||||
Sbjct: 416142 gtgggctgctgagcctgaaatgga 416165



to top

>gb|AC008147.31| Homo sapiens 12 BAC RP3-405J10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 115345

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 254   gtgaccattgtttcttcttt 273
             ||||||||||||||||||||
Sbjct: 43413 gtgaccattgtttcttcttt 43432



to top

>dbj|AK024933.1| Homo sapiens cDNA: FLJ21280 fis, clone COL01884
          Length = 2604

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 254  gtgaccattgtttcttcttt 273
            ||||||||||||||||||||
Sbjct: 2197 gtgaccattgtttcttcttt 2178



to top

>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 253     agtgaccattgtttcttctt 272
               ||||||||||||||||||||
Sbjct: 3750921 agtgaccattgtttcttctt 3750940



to top

>emb|AL133168.6|CNS01DU7 Human chromosome 14 DNA sequence BAC R-187K17 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 195115

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 376   tcttttgttttcttcctctg 395
             ||||||||||||||||||||
Sbjct: 52220 tcttttgttttcttcctctg 52201



to top

>emb|AL669851.8| Mouse DNA sequence from clone RP23-18K13 on chromosome X, complete
             sequence
          Length = 204557

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 375   ctcttttgttttcttcctct 394
             ||||||||||||||||||||
Sbjct: 22494 ctcttttgttttcttcctct 22475


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,343,289
Number of Sequences: 3902068
Number of extensions: 5343289
Number of successful extensions: 115635
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115283
Number of HSP's gapped (non-prelim): 342
length of query: 522
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 499
effective length of database: 17,143,297,704
effective search space: 8554505554296
effective search space used: 8554505554296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top