ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags27k10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY112454.1| Zea mays CL1239_1 mRNA sequence Length = 950 Score = 696 bits (351), Expect = 0.0 Identities = 492/539 (91%) Strand = Plus / Plus Query: 92 atggcgacctcgttccaggggacgacgaccaagtgcaacgcctgcgacaagacggtgtac 151 ||||||||||| |||||||||||||| |||||| ||| |||||||||||||||||||||| Sbjct: 75 atggcgacctccttccaggggacgaccaccaagcgcaccgcctgcgacaagacggtgtac 134 Query: 152 ctcgtcgacaagctcaccgccgacaaccgggtctaccacaaggcctgcttcaggtgccac 211 || || ||||||||||||||||||||||| |||||||||||||||||||| | |||||| Sbjct: 135 cttgtggacaagctcaccgccgacaaccgcatctaccacaaggcctgcttccgctgccac 194 Query: 212 cactgcaagggcaccctcaagctcgcgaattacaactcgttcgaaggggtgctctactgc 271 |||||||||||||||||||||||||| || |||||||| ||||| || |||||||||||| Sbjct: 195 cactgcaagggcaccctcaagctcgccaactacaactccttcgagggagtgctctactgc 254 Query: 272 aggcctcactttgaccagctcttcaagaggactgggagcctcgacaagagcttcgaaggg 331 ||||||||||| |||||||| ||||||||||| |||||| | ||||||||||||||||| Sbjct: 255 aggcctcacttcgaccagctgttcaagaggacagggagcttggacaagagcttcgaagga 314 Query: 332 actccaaaggttgtcaagccagaaaggaatgttgggaatgagaatgctattaaagtctcg 391 ||||| |||||||||||||||||||| || ||||||||||||||||||| ||||||||| Sbjct: 315 actcccaaggttgtcaagccagaaagaaacgttgggaatgagaatgctactaaagtctca 374 Query: 392 agcgcatttgctggcaccagagagaaatgttttggatgcagcaagacagtctatccaatt 451 ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 375 agcgcctttgctggcaccagagagaaatgtgttggatgcagcaagacagtctatccaact 434 Query: 452 gagagggttactgtcaataacaccatgtaccacaagagctgcttcaaatgctgccatgga 511 |||||||| ||||| |||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 435 gagagggtcactgttaataacactatgtaccacaagagctgcttcaagtgctgccatgga 494 Query: 512 gggtgcaccatcagcccttcgaattacatcgcccacgagggcaagctcttctgcaagcac 571 |||||||||||||||||||| || ||||| || |||||||| ||||| | |||||||||| Sbjct: 495 gggtgcaccatcagcccttctaactacattgcgcacgaggggaagctgtactgcaagcac 554 Query: 572 caccacacccagctgatcaaagagaagggaaatttcagccagctcgagaacgatcacga 630 ||||||| |||||||||||| |||||||| || ||||||||||| ||||| || ||||| Sbjct: 555 caccacatccagctgatcaaggagaaggggaacttcagccagcttgagaatgaccacga 613
>gb|AF135591.1|AF135591 Zea mays LIM transcription factor homolog (lim1) mRNA, complete cds Length = 930 Score = 672 bits (339), Expect = 0.0 Identities = 490/539 (90%), Gaps = 1/539 (0%) Strand = Plus / Plus Query: 92 atggcgacctcgttccaggggacgacgaccaagtgcaacgcctgcgacaagacggtgtac 151 ||||||||||| |||||||||||||| |||||| ||| |||||||||||||||||||||| Sbjct: 55 atggcgacctccttccaggggacgaccaccaagcgcaccgcctgcgacaagacggtgtac 114 Query: 152 ctcgtcgacaagctcaccgccgacaaccgggtctaccacaaggcctgcttcaggtgccac 211 || || ||||||||||||||||||||||| |||||||||||||||||||| | |||||| Sbjct: 115 cttgtggacaagctcaccgccgacaaccgcatctaccacaaggcctgcttccgctgccac 174 Query: 212 cactgcaagggcaccctcaagctcgcgaattacaactcgttcgaaggggtgctctactgc 271 |||||||||||||||||||||||||| || |||||||| ||||| || |||||||||||| Sbjct: 175 cactgcaagggcaccctcaagctcgccaactacaactccttcgagggagtgctctactgc 234 Query: 272 aggcctcactttgaccagctcttcaagaggactgggagcctcgacaagagcttcgaaggg 331 ||||||||||| |||||||| ||||||||||| |||||| | ||||||||||||||||| Sbjct: 235 aggcctcacttcgaccagctgttcaagaggacagggagcttggacaagagcttcgaagga 294 Query: 332 actccaaaggttgtcaagccagaaaggaatgttgggaatgagaatgctattaaagtctcg 391 ||||| |||||||||||||||||||| || ||||||||||||||||||| ||||||||| Sbjct: 295 actccgaaggttgtcaagccagaaagaaacgttgggaatgagaatgctactaaagtctca 354 Query: 392 agcgcatttgctggcaccagagagaaatgttttggatgcagcaagacagtctatccaatt 451 ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 355 agcgcctttgctggcaccagagagaaatgtgttggatgcagcaagacagtctatccaact 414 Query: 452 gagagggttactgtcaataacaccatgtaccacaagagctgcttcaaatgctgccatgga 511 |||||||| ||||| || ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 415 gagagggtcactgttaacaacactatgtaccacaagagctgcttcaagtgctgccatgga 474 Query: 512 gggtgcaccatcagcccttcgaattacatcgcccacgagggcaagctcttctgcaagcac 571 |||||||||||||||||||| || ||||| || |||||||| ||||| | |||||||||| Sbjct: 475 gggtgcaccatcagcccttctaactacattgcgcacgaggggaagctgtactgcaagcac 534 Query: 572 caccacacccagctgatcaaagagaagggaaatttcagccagctcgagaacgatcacga 630 ||||||| |||||||||||| || ||||| || ||||||||||| ||||| || ||||| Sbjct: 535 caccacatccagctgatcaagga-aaggggaacttcagccagcttgagaatgaccacga 592
>dbj|AK058220.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-F09, full insert sequence Length = 488 Score = 278 bits (140), Expect = 2e-71 Identities = 221/248 (89%) Strand = Plus / Plus Query: 374 aatgctattaaagtctcgagcgcatttgctggcaccagagagaaatgttttggatgcagc 433 ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||| | Sbjct: 1 aatgctattaaagtctcgagcgcatttgctggcacgagagagaaatgcgtgggatgcaac 60 Query: 434 aagacagtctatccaattgagagggttactgtcaataacaccatgtaccacaagagctgc 493 |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 61 aagacagtctatccaattgaaagggttactgtcaataacaccatgtatcacaaaagctgc 120 Query: 494 ttcaaatgctgccatggagggtgcaccatcagcccttcgaattacatcgcccacgagggc 553 ||||| ||||| |||||||| |||||||| ||||| || ||||||||||| ||||| || Sbjct: 121 ttcaagtgctgtcatggaggatgcaccattagcccctcaaattacatcgcacacgaaggg 180 Query: 554 aagctcttctgcaagcaccaccacacccagctgatcaaagagaagggaaatttcagccag 613 ||||||| |||||||||||||| | ||| |||||||||||||||| || |||||||| Sbjct: 181 aagctctattgcaagcaccaccatattcagttgatcaaagagaaggggaacttcagccaa 240 Query: 614 ctcgagaa 621 || ||||| Sbjct: 241 cttgagaa 248
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 208 bits (105), Expect = 2e-50 Identities = 135/145 (93%) Strand = Plus / Plus Query: 88 ggcaatggcgacctcgttccaggggacgacgaccaagtgcaacgcctgcgacaagacggt 147 |||||||||||| || || |||||||||||||||||||||| || |||||||||||||| Sbjct: 19721034 ggcaatggcgacttcctttcaggggacgacgaccaagtgcatggcgtgcgacaagacggt 19721093 Query: 148 gtacctcgtcgacaagctcaccgccgacaaccgggtctaccacaaggcctgcttcaggtg 207 |||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct: 19721094 gtacctggtcgacaagctcaccgccgacaacagggtctaccacaaggcctgcttccggtg 19721153 Query: 208 ccaccactgcaagggcaccctcaag 232 |||||| |||||||||||||||||| Sbjct: 19721154 ccaccattgcaagggcaccctcaag 19721178 Score = 161 bits (81), Expect = 3e-36 Identities = 144/165 (87%) Strand = Plus / Plus Query: 457 ggttactgtcaataacaccatgtaccacaagagctgcttcaaatgctgccatggagggtg 516 |||||||||||||||||||||||| ||||| ||||||||||| ||||| |||||||| || Sbjct: 19722440 ggttactgtcaataacaccatgtatcacaaaagctgcttcaagtgctgtcatggaggatg 19722499 Query: 517 caccatcagcccttcgaattacatcgcccacgagggcaagctcttctgcaagcaccacca 576 |||||| ||||| || ||||||||||| ||||| || ||||||| |||||||||||||| Sbjct: 19722500 caccattagcccctcaaattacatcgcacacgaagggaagctctattgcaagcaccacca 19722559 Query: 577 cacccagctgatcaaagagaagggaaatttcagccagctcgagaa 621 | ||| |||||||||||||||| || |||||||| || ||||| Sbjct: 19722560 tattcagttgatcaaagagaaggggaacttcagccaacttgagaa 19722604 Score = 127 bits (64), Expect = 5e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 372 agaatgctattaaagtctcgagcgcatttgctggcaccagagagaaatgttttggatgca 431 ||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||| Sbjct: 19722118 agaatgctattaaagtctcgagcgcatttgctggcacgagagagaaatgcgtgggatgca 19722177 Query: 432 gcaagacagtctatccaattgagagggt 459 ||||||||||||||||||||| ||||| Sbjct: 19722178 acaagacagtctatccaattgaaagggt 19722205 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 231 agctcgcgaattacaactcgttcgaaggggtgctctactgcaggcctcactttgaccagc 290 |||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||| Sbjct: 19721374 agctcgcgaactacaactcgtttgaaggagtgctctactgcaggcctcactttgatcagc 19721433 Query: 291 tcttcaagaggactgggagcctcgacaagagcttcgaagg 330 | |||||||||||||| || | ||||||||||| ||||| Sbjct: 19721434 tgttcaagaggactggaagtttagacaagagctttgaagg 19721473 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 332 actccaaaggttgtcaagccagaaa 356 ||||||||||||||||||||||||| Sbjct: 19721578 actccaaaggttgtcaagccagaaa 19721602
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 208 bits (105), Expect = 2e-50 Identities = 135/145 (93%) Strand = Plus / Plus Query: 88 ggcaatggcgacctcgttccaggggacgacgaccaagtgcaacgcctgcgacaagacggt 147 |||||||||||| || || |||||||||||||||||||||| || |||||||||||||| Sbjct: 19647248 ggcaatggcgacttcctttcaggggacgacgaccaagtgcatggcgtgcgacaagacggt 19647307 Query: 148 gtacctcgtcgacaagctcaccgccgacaaccgggtctaccacaaggcctgcttcaggtg 207 |||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct: 19647308 gtacctggtcgacaagctcaccgccgacaacagggtctaccacaaggcctgcttccggtg 19647367 Query: 208 ccaccactgcaagggcaccctcaag 232 |||||| |||||||||||||||||| Sbjct: 19647368 ccaccattgcaagggcaccctcaag 19647392 Score = 161 bits (81), Expect = 3e-36 Identities = 144/165 (87%) Strand = Plus / Plus Query: 457 ggttactgtcaataacaccatgtaccacaagagctgcttcaaatgctgccatggagggtg 516 |||||||||||||||||||||||| ||||| ||||||||||| ||||| |||||||| || Sbjct: 19648654 ggttactgtcaataacaccatgtatcacaaaagctgcttcaagtgctgtcatggaggatg 19648713 Query: 517 caccatcagcccttcgaattacatcgcccacgagggcaagctcttctgcaagcaccacca 576 |||||| ||||| || ||||||||||| ||||| || ||||||| |||||||||||||| Sbjct: 19648714 caccattagcccctcaaattacatcgcacacgaagggaagctctattgcaagcaccacca 19648773 Query: 577 cacccagctgatcaaagagaagggaaatttcagccagctcgagaa 621 | ||| |||||||||||||||| || |||||||| || ||||| Sbjct: 19648774 tattcagttgatcaaagagaaggggaacttcagccaacttgagaa 19648818 Score = 127 bits (64), Expect = 5e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 372 agaatgctattaaagtctcgagcgcatttgctggcaccagagagaaatgttttggatgca 431 ||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||| Sbjct: 19648332 agaatgctattaaagtctcgagcgcatttgctggcacgagagagaaatgcgtgggatgca 19648391 Query: 432 gcaagacagtctatccaattgagagggt 459 ||||||||||||||||||||| ||||| Sbjct: 19648392 acaagacagtctatccaattgaaagggt 19648419 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 231 agctcgcgaattacaactcgttcgaaggggtgctctactgcaggcctcactttgaccagc 290 |||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||| Sbjct: 19647588 agctcgcgaactacaactcgtttgaaggagtgctctactgcaggcctcactttgatcagc 19647647 Query: 291 tcttcaagaggactgggagcctcgacaagagcttcgaagg 330 | |||||||||||||| || | ||||||||||| ||||| Sbjct: 19647648 tgttcaagaggactggaagtttagacaagagctttgaagg 19647687 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 332 actccaaaggttgtcaagccagaaa 356 ||||||||||||||||||||||||| Sbjct: 19647792 actccaaaggttgtcaagccagaaa 19647816
>emb|AL837527.2|CNS08CAQ Oryza sativa chromosome 12, . BAC OSJNBb0078B20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133659 Score = 208 bits (105), Expect = 2e-50 Identities = 135/145 (93%) Strand = Plus / Minus Query: 88 ggcaatggcgacctcgttccaggggacgacgaccaagtgcaacgcctgcgacaagacggt 147 |||||||||||| || || |||||||||||||||||||||| || |||||||||||||| Sbjct: 5959 ggcaatggcgacttcctttcaggggacgacgaccaagtgcatggcgtgcgacaagacggt 5900 Query: 148 gtacctcgtcgacaagctcaccgccgacaaccgggtctaccacaaggcctgcttcaggtg 207 |||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct: 5899 gtacctggtcgacaagctcaccgccgacaacagggtctaccacaaggcctgcttccggtg 5840 Query: 208 ccaccactgcaagggcaccctcaag 232 |||||| |||||||||||||||||| Sbjct: 5839 ccaccattgcaagggcaccctcaag 5815 Score = 161 bits (81), Expect = 3e-36 Identities = 144/165 (87%) Strand = Plus / Minus Query: 457 ggttactgtcaataacaccatgtaccacaagagctgcttcaaatgctgccatggagggtg 516 |||||||||||||||||||||||| ||||| ||||||||||| ||||| |||||||| || Sbjct: 4553 ggttactgtcaataacaccatgtatcacaaaagctgcttcaagtgctgtcatggaggatg 4494 Query: 517 caccatcagcccttcgaattacatcgcccacgagggcaagctcttctgcaagcaccacca 576 |||||| ||||| || ||||||||||| ||||| || ||||||| |||||||||||||| Sbjct: 4493 caccattagcccctcaaattacatcgcacacgaagggaagctctattgcaagcaccacca 4434 Query: 577 cacccagctgatcaaagagaagggaaatttcagccagctcgagaa 621 | ||| |||||||||||||||| || |||||||| || ||||| Sbjct: 4433 tattcagttgatcaaagagaaggggaacttcagccaacttgagaa 4389 Score = 127 bits (64), Expect = 5e-26 Identities = 82/88 (93%) Strand = Plus / Minus Query: 372 agaatgctattaaagtctcgagcgcatttgctggcaccagagagaaatgttttggatgca 431 ||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||| Sbjct: 4875 agaatgctattaaagtctcgagcgcatttgctggcacgagagagaaatgcgtgggatgca 4816 Query: 432 gcaagacagtctatccaattgagagggt 459 ||||||||||||||||||||| ||||| Sbjct: 4815 acaagacagtctatccaattgaaagggt 4788 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Minus Query: 231 agctcgcgaattacaactcgttcgaaggggtgctctactgcaggcctcactttgaccagc 290 |||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||| Sbjct: 5619 agctcgcgaactacaactcgtttgaaggagtgctctactgcaggcctcactttgatcagc 5560 Query: 291 tcttcaagaggactgggagcctcgacaagagcttcgaagg 330 | |||||||||||||| || | ||||||||||| ||||| Sbjct: 5559 tgttcaagaggactggaagtttagacaagagctttgaagg 5520 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 332 actccaaaggttgtcaagccagaaa 356 ||||||||||||||||||||||||| Sbjct: 5415 actccaaaggttgtcaagccagaaa 5391
>ref|NM_100894.2| Arabidopsis thaliana transcription factor/ zinc ion binding AT1G10200 mRNA, complete cds Length = 944 Score = 99.6 bits (50), Expect = 1e-17 Identities = 119/142 (83%) Strand = Plus / Plus Query: 477 tgtaccacaagagctgcttcaaatgctgccatggagggtgcaccatcagcccttcgaatt 536 |||||||||||||||||||||| || |||||||| ||||| || ||||||||||||| Sbjct: 470 tgtaccacaagagctgcttcaagtgtacacatggaggctgcacgataagcccttcgaatt 529 Query: 537 acatcgcccacgagggcaagctcttctgcaagcaccaccacacccagctgatcaaagaga 596 |||| || |||||||| ||||| | |||||||| || || | ||||||||||| |||| Sbjct: 530 acatagctcacgagggtaagctatattgcaagcatcatcatattcagctgatcaaggaga 589 Query: 597 agggaaatttcagccagctcga 618 | ||||| || ||||||||||| Sbjct: 590 aaggaaacttgagccagctcga 611 Score = 83.8 bits (42), Expect = 6e-13 Identities = 150/186 (80%) Strand = Plus / Plus Query: 155 gtcgacaagctcaccgccgacaaccgggtctaccacaaggcctgcttcaggtgccaccac 214 ||||||||| | |||||||| ||||||||||||||||| || || ||| | || ||||| Sbjct: 142 gtcgacaagttaaccgccgataaccgggtctaccacaaagcttgtttccgatgtcaccat 201 Query: 215 tgcaagggcaccctcaagctcgcgaattacaactcgttcgaaggggtgctctactgcagg 274 ||||| || || |||||||| ||||||||||| || ||||| || ||||||||||| Sbjct: 202 tgcaaaggaactctcaagcttagcaattacaactcctttgaaggagttctctactgcaga 261 Query: 275 cctcactttgaccagctcttcaagaggactgggagcctcgacaagagcttcgaagggact 334 || || || || || ||||||||| ||||| || || || || |||||||||||||| Sbjct: 262 ccacatttcgatcaaaacttcaagagaactggaagtcttgagaaaagcttcgaagggaca 321 Query: 335 ccaaag 340 |||||| Sbjct: 322 ccaaag 327
>gb|AY072143.1| Arabidopsis thaliana At1g10200 mRNA sequence Length = 873 Score = 99.6 bits (50), Expect = 1e-17 Identities = 119/142 (83%) Strand = Plus / Plus Query: 477 tgtaccacaagagctgcttcaaatgctgccatggagggtgcaccatcagcccttcgaatt 536 |||||||||||||||||||||| || |||||||| ||||| || ||||||||||||| Sbjct: 436 tgtaccacaagagctgcttcaagtgtacacatggaggctgcacgataagcccttcgaatt 495 Query: 537 acatcgcccacgagggcaagctcttctgcaagcaccaccacacccagctgatcaaagaga 596 |||| || |||||||| ||||| | |||||||| || || | ||||||||||| |||| Sbjct: 496 acatagctcacgagggtaagctatattgcaagcatcatcatattcagctgatcaaggaga 555 Query: 597 agggaaatttcagccagctcga 618 | ||||| || ||||||||||| Sbjct: 556 aaggaaacttgagccagctcga 577 Score = 83.8 bits (42), Expect = 6e-13 Identities = 150/186 (80%) Strand = Plus / Plus Query: 155 gtcgacaagctcaccgccgacaaccgggtctaccacaaggcctgcttcaggtgccaccac 214 ||||||||| | |||||||| ||||||||||||||||| || || ||| | || ||||| Sbjct: 109 gtcgacaagttaaccgccgataaccgggtctaccacaaagcttgtttccgatgtcaccat 168 Query: 215 tgcaagggcaccctcaagctcgcgaattacaactcgttcgaaggggtgctctactgcagg 274 ||||| || || |||||||| ||||||||||| || ||||| || ||||||||||| Sbjct: 169 tgcaaaggaactctcaagcttagcaattacaactcctttgaaggagttctctactgcaga 228 Query: 275 cctcactttgaccagctcttcaagaggactgggagcctcgacaagagcttcgaagggact 334 || || || || || ||||||||| ||||| || || || || |||||||||||||| Sbjct: 229 ccacatttcgatcaaaacttcaagagaactggaagtcttgagaaaagcttcgaagggaca 288 Query: 335 ccaaag 340 |||||| Sbjct: 289 ccaaag 294
>gb|AF370569.1|AF370569 Arabidopsis thaliana similar to transcription factor SF3 (pir|IS37656) (F14N23.8) mRNA, complete cds Length = 610 Score = 99.6 bits (50), Expect = 1e-17 Identities = 119/142 (83%) Strand = Plus / Plus Query: 477 tgtaccacaagagctgcttcaaatgctgccatggagggtgcaccatcagcccttcgaatt 536 |||||||||||||||||||||| || |||||||| ||||| || ||||||||||||| Sbjct: 386 tgtaccacaagagctgcttcaagtgtacacatggaggctgcacgataagcccttcgaatt 445 Query: 537 acatcgcccacgagggcaagctcttctgcaagcaccaccacacccagctgatcaaagaga 596 |||| || |||||||| ||||| | |||||||| || || | ||||||||||| |||| Sbjct: 446 acatagctcacgagggtaagctatattgcaagcatcatcatattcagctgatcaaggaga 505 Query: 597 agggaaatttcagccagctcga 618 | ||||| || ||||||||||| Sbjct: 506 aaggaaacttgagccagctcga 527 Score = 83.8 bits (42), Expect = 6e-13 Identities = 150/186 (80%) Strand = Plus / Plus Query: 155 gtcgacaagctcaccgccgacaaccgggtctaccacaaggcctgcttcaggtgccaccac 214 ||||||||| | |||||||| ||||||||||||||||| || || ||| | || ||||| Sbjct: 58 gtcgacaagttaaccgccgataaccgggtctaccacaaagcttgtttccgatgtcaccat 117 Query: 215 tgcaagggcaccctcaagctcgcgaattacaactcgttcgaaggggtgctctactgcagg 274 ||||| || || |||||||| ||||||||||| || ||||| || ||||||||||| Sbjct: 118 tgcaaaggaactctcaagcttagcaattacaactcctttgaaggagttctctactgcaga 177 Query: 275 cctcactttgaccagctcttcaagaggactgggagcctcgacaagagcttcgaagggact 334 || || || || || ||||||||| ||||| || || || || |||||||||||||| Sbjct: 178 ccacatttcgatcaaaacttcaagagaactggaagtcttgagaaaagcttcgaagggaca 237 Query: 335 ccaaag 340 |||||| Sbjct: 238 ccaaag 243
>gb|AY085377.1| Arabidopsis thaliana clone 148790 mRNA, complete sequence Length = 886 Score = 99.6 bits (50), Expect = 1e-17 Identities = 119/142 (83%) Strand = Plus / Plus Query: 477 tgtaccacaagagctgcttcaaatgctgccatggagggtgcaccatcagcccttcgaatt 536 |||||||||||||||||||||| || |||||||| ||||| || ||||||||||||| Sbjct: 470 tgtaccacaagagctgcttcaagtgtacacatggaggctgcacgataagcccttcgaatt 529 Query: 537 acatcgcccacgagggcaagctcttctgcaagcaccaccacacccagctgatcaaagaga 596 |||| || |||||||| ||||| | |||||||| || || | ||||||||||| |||| Sbjct: 530 acatagctcacgagggtaagctatattgcaagcatcatcatattcagctgatcaaggaga 589 Query: 597 agggaaatttcagccagctcga 618 | ||||| || ||||||||||| Sbjct: 590 aaggaaacttgagccagctcga 611 Score = 75.8 bits (38), Expect = 2e-10 Identities = 149/186 (80%) Strand = Plus / Plus Query: 155 gtcgacaagctcaccgccgacaaccgggtctaccacaaggcctgcttcaggtgccaccac 214 ||||||||| | |||||||| || |||||||||||||| || || ||| | || ||||| Sbjct: 142 gtcgacaagttaaccgccgataatcgggtctaccacaaagcttgtttccgatgtcaccat 201 Query: 215 tgcaagggcaccctcaagctcgcgaattacaactcgttcgaaggggtgctctactgcagg 274 ||||| || || |||||||| ||||||||||| || ||||| || ||||||||||| Sbjct: 202 tgcaaaggaactctcaagcttagcaattacaactcctttgaaggagttctctactgcaga 261 Query: 275 cctcactttgaccagctcttcaagaggactgggagcctcgacaagagcttcgaagggact 334 || || || || || ||||||||| ||||| || || || || |||||||||||||| Sbjct: 262 ccacatttcgatcaaaacttcaagagaactggaagtcttgagaaaagcttcgaagggaca 321 Query: 335 ccaaag 340 |||||| Sbjct: 322 ccaaag 327
>gb|AC005489.1|AC005489 Genomic sequence for Arabidopsis thaliana BAC F14N23 from Chromosome 1, complete sequence Length = 100746 Score = 99.6 bits (50), Expect = 1e-17 Identities = 119/142 (83%) Strand = Plus / Minus Query: 477 tgtaccacaagagctgcttcaaatgctgccatggagggtgcaccatcagcccttcgaatt 536 |||||||||||||||||||||| || |||||||| ||||| || ||||||||||||| Sbjct: 27224 tgtaccacaagagctgcttcaagtgtacacatggaggctgcacgataagcccttcgaatt 27165 Query: 537 acatcgcccacgagggcaagctcttctgcaagcaccaccacacccagctgatcaaagaga 596 |||| || |||||||| ||||| | |||||||| || || | ||||||||||| |||| Sbjct: 27164 acatagctcacgagggtaagctatattgcaagcatcatcatattcagctgatcaaggaga 27105 Query: 597 agggaaatttcagccagctcga 618 | ||||| || ||||||||||| Sbjct: 27104 aaggaaacttgagccagctcga 27083 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 155 gtcgacaagctcaccgccgacaaccgggtctaccacaa 192 ||||||||| | |||||||| ||||||||||||||||| Sbjct: 28066 gtcgacaagttaaccgccgataaccgggtctaccacaa 28029 Score = 40.1 bits (20), Expect = 8.6 Identities = 74/92 (80%) Strand = Plus / Minus Query: 239 aattacaactcgttcgaaggggtgctctactgcaggcctcactttgaccagctcttcaag 298 ||||||||||| || ||||| || ||||||||||| || || || || || ||||||| Sbjct: 27791 aattacaactcctttgaaggagttctctactgcagaccacatttcgatcaaaacttcaag 27732 Query: 299 aggactgggagcctcgacaagagcttcgaagg 330 || ||||| || || || || ||||||||||| Sbjct: 27731 agaactggaagtcttgagaaaagcttcgaagg 27700
>emb|X74319.1|ATLIM1 A.thaliana atl1 gene Length = 1140 Score = 99.6 bits (50), Expect = 1e-17 Identities = 119/142 (83%) Strand = Plus / Plus Query: 477 tgtaccacaagagctgcttcaaatgctgccatggagggtgcaccatcagcccttcgaatt 536 |||||||||||||||||||||| || |||||||| ||||| || ||||||||||||| Sbjct: 924 tgtaccacaagagctgcttcaagtgtacacatggaggctgcacgataagcccttcgaatt 983 Query: 537 acatcgcccacgagggcaagctcttctgcaagcaccaccacacccagctgatcaaagaga 596 |||| || |||||||| ||||| | |||||||| || || | ||||||||||| |||| Sbjct: 984 acatagctcacgagggtaagctatattgcaagcatcatcatattcagctgatcaaggaga 1043 Query: 597 agggaaatttcagccagctcga 618 | ||||| || ||||||||||| Sbjct: 1044 aaggaaacttgagccagctcga 1065 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 155 gtcgacaagctcaccgccgacaaccgggtctaccacaa 192 ||||||||| | |||||||| ||||||||||||||||| Sbjct: 82 gtcgacaagttaaccgccgataaccgggtctaccacaa 119 Score = 40.1 bits (20), Expect = 8.6 Identities = 74/92 (80%) Strand = Plus / Plus Query: 239 aattacaactcgttcgaaggggtgctctactgcaggcctcactttgaccagctcttcaag 298 ||||||||||| || ||||| || ||||||||||| || || || || || ||||||| Sbjct: 357 aattacaactcctttgaaggagttctctactgcagaccacatttcgatcaaaacttcaag 416 Query: 299 aggactgggagcctcgacaagagcttcgaagg 330 || ||||| || || || || ||||||||||| Sbjct: 417 agaactggaagtcttgagaaaagcttcgaagg 448
>dbj|AB208712.1| Eucalyptus camaldulensis Eclim1 gene for transcription factor lim1, complete cds Length = 1878 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 479 taccacaagagctgcttcaaatgctgccatggagggtgcaccatcagcccttcgaattac 538 |||||||||||||||||||||||| ||| || |||||| |||||||| || || ||| Sbjct: 1415 taccacaagagctgcttcaaatgcacccacggggggtgcgtgatcagcccatccaactac 1474 Query: 539 atcgcccacgagggcaagctcttctgcaagcaccaccacacccagctgatcaaagagaag 598 |||| |||||||| || |||| ||||| |||||||||||| ||||| || || |||||| Sbjct: 1475 gtcgcacacgaggggaaactctactgcaggcaccaccacactcagctcataaaggagaag 1534 Query: 599 ggaaatttcagccagctcgag 619 || ||| ||||||| |||||| Sbjct: 1535 ggcaatctcagccaactcgag 1555 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 158 gacaagctcaccgccgacaaccgggtctaccacaaggcctgcttcaggtgccaccactgc 217 ||||||||||| || ||||| | |||||||||||||||||||||| |||||||| ||| Sbjct: 157 gacaagctcacagctgacaatagaatctaccacaaggcctgcttcagatgccaccattgc 216 Query: 218 aagggcaccctcaag 232 || || || |||||| Sbjct: 217 aaagggactctcaag 231 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 266 tactgcaggcctcactttgaccagctcttcaagaggactgggagcctcgacaagagcttc 325 |||||| |||| || || || |||||||||||||| ||||| |||||||| || ||||| Sbjct: 855 tactgccggccgcatttcgatcagctcttcaagagaactggcagcctcgaaaaaagcttt 914 Query: 326 gaagg 330 ||||| Sbjct: 915 gaagg 919
>dbj|AB208711.1| Eucalyptus camaldulensis Eclim1 mRNA for transcription factor lim1, complete cds Length = 945 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 479 taccacaagagctgcttcaaatgctgccatggagggtgcaccatcagcccttcgaattac 538 |||||||||||||||||||||||| ||| || |||||| |||||||| || || ||| Sbjct: 483 taccacaagagctgcttcaaatgcacccacggggggtgcgtgatcagcccatccaactac 542 Query: 539 atcgcccacgagggcaagctcttctgcaagcaccaccacacccagctgatcaaagagaag 598 |||| |||||||| || |||| ||||| |||||||||||| ||||| || || |||||| Sbjct: 543 gtcgcacacgaggggaaactctactgcaggcaccaccacactcagctcataaaggagaag 602 Query: 599 ggaaatttcagccagctcgag 619 || ||| ||||||| |||||| Sbjct: 603 ggcaatctcagccaactcgag 623 Score = 89.7 bits (45), Expect = 1e-14 Identities = 141/173 (81%) Strand = Plus / Plus Query: 158 gacaagctcaccgccgacaaccgggtctaccacaaggcctgcttcaggtgccaccactgc 217 ||||||||||| || ||||| | |||||||||||||||||||||| |||||||| ||| Sbjct: 156 gacaagctcacagctgacaatagaatctaccacaaggcctgcttcagatgccaccattgc 215 Query: 218 aagggcaccctcaagctcgcgaattacaactcgttcgaaggggtgctctactgcaggcct 277 || || || |||||||| | ||| || || || || ||||| || | |||||| |||| Sbjct: 216 aaagggactctcaagcttgggaactataattcatttgaaggagtcttgtactgccggccg 275 Query: 278 cactttgaccagctcttcaagaggactgggagcctcgacaagagcttcgaagg 330 || || || |||||||||||||| ||||| |||||||| || ||||| ||||| Sbjct: 276 catttcgatcagctcttcaagagaactggcagcctcgaaaaaagctttgaagg 328
>dbj|AB208710.1| Eucalyptus globulus Eglim1 gene for transcription factor lim1, complete cds Length = 1861 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 479 taccacaagagctgcttcaaatgctgccatggagggtgcaccatcagcccttcgaattac 538 |||||||||||||||||||||||| ||| || |||||| |||||||| || || ||| Sbjct: 1414 taccacaagagctgcttcaaatgcacccacggggggtgcgtgatcagcccatccaactac 1473 Query: 539 atcgcccacgagggcaagctcttctgcaagcaccaccacacccagctgatcaaagagaag 598 |||| |||||||| || |||| ||||| |||||||||||| ||||| || || |||||| Sbjct: 1474 gtcgcgcacgaggggaaactctactgcaggcaccaccacactcagctcataaaggagaag 1533 Query: 599 ggaaatttcagccagctcgag 619 || ||| ||||||| |||||| Sbjct: 1534 ggcaatctcagccaactcgag 1554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 158 gacaagctcaccgccgacaaccgggtctaccacaaggcctgcttcaggtgccaccactgc 217 ||||||||||| || ||||| | |||||||||||||||||||||| |||||||| ||| Sbjct: 167 gacaagctcacagctgacaatagaatctaccacaaggcctgcttcagatgccaccattgc 226 Query: 218 aagggcaccctcaag 232 || || || |||||| Sbjct: 227 aaagggactctcaag 241 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 266 tactgcaggcctcactttgaccagctcttcaagaggactgggagcctcgacaagagcttc 325 |||||| |||| || || || |||||||||||||| ||||| |||||||| || ||||| Sbjct: 854 tactgccggccgcatttcgatcagctcttcaagagaactggcagcctcgaaaaaagcttt 913 Query: 326 gaagg 330 ||||| Sbjct: 914 gaagg 918
>dbj|AB208709.1| Eucalyptus globulus Eglim1 mRNA for transcription factor lim1, complete cds Length = 941 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 479 taccacaagagctgcttcaaatgctgccatggagggtgcaccatcagcccttcgaattac 538 |||||||||||||||||||||||| ||| || |||||| |||||||| || || ||| Sbjct: 494 taccacaagagctgcttcaaatgcacccacggggggtgcgtgatcagcccatccaactac 553 Query: 539 atcgcccacgagggcaagctcttctgcaagcaccaccacacccagctgatcaaagagaag 598 |||| |||||||| || |||| ||||| |||||||||||| ||||| || || |||||| Sbjct: 554 gtcgcgcacgaggggaaactctactgcaggcaccaccacactcagctcataaaggagaag 613 Query: 599 ggaaatttcagccagctcgag 619 || ||| ||||||| |||||| Sbjct: 614 ggcaatctcagccaactcgag 634 Score = 89.7 bits (45), Expect = 1e-14 Identities = 141/173 (81%) Strand = Plus / Plus Query: 158 gacaagctcaccgccgacaaccgggtctaccacaaggcctgcttcaggtgccaccactgc 217 ||||||||||| || ||||| | |||||||||||||||||||||| |||||||| ||| Sbjct: 167 gacaagctcacagctgacaatagaatctaccacaaggcctgcttcagatgccaccattgc 226 Query: 218 aagggcaccctcaagctcgcgaattacaactcgttcgaaggggtgctctactgcaggcct 277 || || || |||||||| | ||| || || || || ||||| || | |||||| |||| Sbjct: 227 aaagggactctcaagcttgggaactataattcatttgaaggagtcttgtactgccggccg 286 Query: 278 cactttgaccagctcttcaagaggactgggagcctcgacaagagcttcgaagg 330 || || || |||||||||||||| ||||| |||||||| || ||||| ||||| Sbjct: 287 catttcgatcagctcttcaagagaactggcagcctcgaaaaaagctttgaagg 339
>gb|DQ242645.1| Brassica napus LIM domain protein mRNA, complete cds Length = 570 Score = 93.7 bits (47), Expect = 7e-16 Identities = 116/139 (83%) Strand = Plus / Plus Query: 477 tgtaccacaagagctgcttcaaatgctgccatggagggtgcaccatcagcccttcgaatt 536 |||||||||||||||||||||| || ||||| || ||||| || || |||||||||| Sbjct: 386 tgtaccacaagagctgcttcaagtgtacacatgggggatgcacgataagtccttcgaatt 445 Query: 537 acatcgcccacgagggcaagctcttctgcaagcaccaccacacccagctgatcaaagaga 596 |||| || |||||||| ||||| | ||||||||||| || | ||||||||||| |||| Sbjct: 446 acatagctcacgaggggaagctttattgcaagcaccatcatattcagctgatcaaggaga 505 Query: 597 agggaaatttcagccagct 615 | |||||||| |||||||| Sbjct: 506 aaggaaatttgagccagct 524 Score = 91.7 bits (46), Expect = 3e-15 Identities = 169/210 (80%) Strand = Plus / Plus Query: 131 gcctgcgacaagacggtgtacctcgtcgacaagctcaccgccgacaaccgggtctaccac 190 ||||| ||||| || || |||||||| |||||| | ||||| || ||||||||||||||| Sbjct: 34 gcctgtgacaaaaccgtttacctcgttgacaagttaaccgcagataaccgggtctaccac 93 Query: 191 aaggcctgcttcaggtgccaccactgcaagggcaccctcaagctcgcgaattacaactcg 250 || ||||| ||| | || ||||| ||||| || || |||||||| ||||||||||| Sbjct: 94 aaagcctgtttccgctgtcaccattgcaaaggaactctcaagcttagcaattacaactcc 153 Query: 251 ttcgaaggggtgctctactgcaggcctcactttgaccagctcttcaagaggactgggagc 310 || ||||| | ||||| ||||| || || ||||| ||| ||||||||| || || || Sbjct: 154 tttgaaggagctctctattgcagaccacattttgatcagaacttcaagagaacaggaagt 213 Query: 311 ctcgacaagagcttcgaagggactccaaag 340 || || ||||||||||||||||| |||||| Sbjct: 214 cttgagaagagcttcgaagggacaccaaag 243
>gb|DQ242049.1| Brassica napus LIM-domain protein (LIM) gene, complete cds Length = 1127 Score = 93.7 bits (47), Expect = 7e-16 Identities = 116/139 (83%) Strand = Plus / Plus Query: 477 tgtaccacaagagctgcttcaaatgctgccatggagggtgcaccatcagcccttcgaatt 536 |||||||||||||||||||||| || ||||| || ||||| || || |||||||||| Sbjct: 908 tgtaccacaagagctgcttcaagtgtacacatgggggatgcacgataagtccttcgaatt 967 Query: 537 acatcgcccacgagggcaagctcttctgcaagcaccaccacacccagctgatcaaagaga 596 |||| || |||||||| ||||| | ||||||||||| || | ||||||||||| |||| Sbjct: 968 acatagctcacgaggggaagctttattgcaagcaccatcatattcagctgatcaaggaga 1027 Query: 597 agggaaatttcagccagct 615 | |||||||| |||||||| Sbjct: 1028 aaggaaatttgagccagct 1046 Score = 60.0 bits (30), Expect = 9e-06 Identities = 84/102 (82%) Strand = Plus / Plus Query: 131 gcctgcgacaagacggtgtacctcgtcgacaagctcaccgccgacaaccgggtctaccac 190 ||||| ||||| || || |||||||| |||||| | ||||| || ||||||||||||||| Sbjct: 37 gcctgtgacaaaaccgtttacctcgttgacaagttaaccgcagataaccgggtctaccac 96 Query: 191 aaggcctgcttcaggtgccaccactgcaagggcaccctcaag 232 || ||||| ||| | || ||||| ||||| || || |||||| Sbjct: 97 aaagcctgtttccgctgtcaccattgcaaaggaactctcaag 138 Score = 40.1 bits (20), Expect = 8.6 Identities = 74/92 (80%) Strand = Plus / Plus Query: 239 aattacaactcgttcgaaggggtgctctactgcaggcctcactttgaccagctcttcaag 298 ||||||||||| || ||||| | ||||| ||||| || || ||||| ||| ||||||| Sbjct: 339 aattacaactcctttgaaggagctctctattgcagaccacattttgatcagaacttcaag 398 Query: 299 aggactgggagcctcgacaagagcttcgaagg 330 || || || || || || |||||||||||||| Sbjct: 399 agaacaggaagtcttgagaagagcttcgaagg 430
>dbj|AB079510.1| Populus kitakamiensis Pklim1 mRNA for transcription factor LIM, complete cds Length = 1036 Score = 83.8 bits (42), Expect = 6e-13 Identities = 174/218 (79%) Strand = Plus / Plus Query: 137 gacaagacggtgtacctcgtcgacaagctcaccgccgacaaccgggtctaccacaaggcc 196 |||||||| || || || |||||||| || || ||||| ||||| | ||||| ||||| Sbjct: 218 gacaagactgtctatcttgtcgacaaactaacagccgataaccgtgcgtaccataaggct 277 Query: 197 tgcttcaggtgccaccactgcaagggcaccctcaagctcgcgaattacaactcgttcgaa 256 |||||| | ||||| || ||||| || ||||||||||| | || ||||| || || ||| Sbjct: 278 tgcttccgatgccatcattgcaaaggaaccctcaagcttggcaactacaattcctttgaa 337 Query: 257 ggggtgctctactgcaggcctcactttgaccagctcttcaagaggactgggagcctcgac 316 ||||| |||||||||||||| || ||||| || || ||||| || ||||| || || ||| Sbjct: 338 ggggttctctactgcaggccacattttgatcaactgttcaaaagaactggcagtcttgac 397 Query: 317 aagagcttcgaagggactccaaaggttgtcaagccaga 354 || ||||| || ||||| ||||| |||| |||||||| Sbjct: 398 aaaagctttgaggggacaccaaaaattgtaaagccaga 435 Score = 44.1 bits (22), Expect = 0.55 Identities = 106/134 (79%) Strand = Plus / Plus Query: 479 taccacaagagctgcttcaaatgctgccatggagggtgcaccatcagcccttcgaattac 538 |||||||| ||||||||||||||| ||| ||||| || || || ||||| || || ||| Sbjct: 566 taccacaaaagctgcttcaaatgcatccacggaggatgtacaattagcccatcaaactac 625 Query: 539 atcgcccacgagggcaagctcttctgcaagcaccaccacacccagctgatcaaagagaag 598 || || || || || |||| |||||| |||||||||| ||| || ||||| || ||| Sbjct: 626 attgcacatgaaggtcgcctctactgcaaacaccaccacaaccaacttatcaaggaaaag 685 Query: 599 ggaaatttcagcca 612 ||||| || ||||| Sbjct: 686 ggaaacttgagcca 699
>gb|AC125482.9| Medicago truncatula clone mth2-15h11, complete sequence Length = 129658 Score = 81.8 bits (41), Expect = 3e-12 Identities = 113/137 (82%) Strand = Plus / Minus Query: 479 taccacaagagctgcttcaaatgctgccatggagggtgcaccatcagcccttcgaattac 538 ||||| ||||| || |||||||| || ||||||||||| || ||||| ||||| |||||| Sbjct: 88975 taccataagagttgtttcaaatgttgtcatggagggtgtactatcagtccttccaattac 88916 Query: 539 atcgcccacgagggcaagctcttctgcaagcaccaccacacccagctgatcaaagagaag 598 || || || ||||| || |||| |||||| |||||||| | || |||||||| | ||| Sbjct: 88915 atagcacatgagggaaaactctactgcaaacaccaccatattcaactgatcaagcaaaag 88856 Query: 599 ggaaatttcagccagct 615 |||||||| |||||||| Sbjct: 88855 ggaaatttaagccagct 88839
>gb|AF116849.1|AF116849 Helianthus annuus Length = 1280 Score = 75.8 bits (38), Expect = 2e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 479 taccacaagagctgcttcaaatgctgccatggagggtgcaccatcagcccttcgaattac 538 |||||||| || ||||| ||||| |||||||||| || || |||||||| |||||||| Sbjct: 802 taccacaaaagttgctttaaatgtagccatggaggttgtacaatcagcccatcgaattat 861 Query: 539 atcgcccacgagggcaagctcttctgcaagcaccaccacacccagctgatcaaagagaag 598 ||||| || || || | |||| ||||| |||||||||||||| || |||||||||||| Sbjct: 862 atcgcgcatgaaggtcatctctactgcagacaccaccacacccaactcatcaaagagaag 921 Query: 599 gg 600 || Sbjct: 922 gg 923
>gb|AF187105.1|AF187105 Helianthus annuus LIM domain protein WLIM1 (WLIM1) mRNA, complete cds Length = 728 Score = 75.8 bits (38), Expect = 2e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 479 taccacaagagctgcttcaaatgctgccatggagggtgcaccatcagcccttcgaattac 538 |||||||| || ||||| ||||| |||||||||| || || |||||||| |||||||| Sbjct: 388 taccacaaaagttgctttaaatgtagccatggaggttgtacaatcagcccatcgaattat 447 Query: 539 atcgcccacgagggcaagctcttctgcaagcaccaccacacccagctgatcaaagagaag 598 ||||| || || || | |||| ||||| |||||||||||||| || |||||||||||| Sbjct: 448 atcgcgcatgaaggtcatctctactgcagacaccaccacacccaactcatcaaagagaag 507 Query: 599 gg 600 || Sbjct: 508 gg 509
>gb|DQ167188.1| Brassica rapa putative transcription factor LIM mRNA, partial cds Length = 338 Score = 73.8 bits (37), Expect = 6e-10 Identities = 151/189 (79%) Strand = Plus / Plus Query: 152 ctcgtcgacaagctcaccgccgacaaccgggtctaccacaaggcctgcttcaggtgccac 211 |||||||||||| | ||||| || ||||||||||||||||| || || ||| | || ||| Sbjct: 1 ctcgtcgacaagttaaccgctgataaccgggtctaccacaaagcttgtttccgttgtcac 60 Query: 212 cactgcaagggcaccctcaagctcgcgaattacaactcgttcgaaggggtgctctactgc 271 || ||||| || || |||||||| || |||||||| || ||||| || ||||| ||| Sbjct: 61 cattgcaaaggaactctcaagcttagcaactacaactcatttgaaggagttctctattgc 120 Query: 272 aggcctcactttgaccagctcttcaagaggactgggagcctcgacaagagcttcgaaggg 331 || ||||| || || || ||||||||| ||||| || || || || |||||||||||| Sbjct: 121 agacctcatttcgatcaaaacttcaagagaactggaagtcttgagaaaagcttcgaaggg 180 Query: 332 actccaaag 340 || |||||| Sbjct: 181 acaccaaag 189
>gb|AF197567.1|AF197567 Nicotiana tabacum pollen specific LIM domain protein 1a mRNA, complete cds Length = 904 Score = 65.9 bits (33), Expect = 2e-07 Identities = 120/149 (80%) Strand = Plus / Plus Query: 188 cacaaggcctgcttcaggtgccaccactgcaagggcaccctcaagctcgcgaattacaac 247 |||||||| ||||| |||||| |||||||||| | || ||||||||| |||| |||| Sbjct: 206 cacaaggcttgctttaggtgctaccactgcaaaagtactctcaagctcagtaatttcaac 265 Query: 248 tcgttcgaaggggtgctctactgcaggcctcactttgaccagctcttcaagaggactggg 307 || || || ||||| | ||||| |||||||||||||| ||||| || ||||| ||||| Sbjct: 266 tcctttgagggggtaatttactgtaggcctcactttgatcagctttttaagagaactggc 325 Query: 308 agcctcgacaagagcttcgaagggactcc 336 || | |||||||| || ||||| ||||| Sbjct: 326 agtttggacaagagttttgaaggaactcc 354
>gb|AF197568.1|AF197568 Nicotiana tabacum pollen specific LIM domain protein 1b mRNA, complete cds Length = 813 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 188 cacaaggcctgcttcaggtgccaccactgcaagggcaccctcaagctcgcgaattacaac 247 |||||||| |||||||||||| |||| ||||| | || ||||||||| |||| |||| Sbjct: 193 cacaaggcttgcttcaggtgctaccattgcaaaagtactctcaagctcagtaatttcaac 252 Query: 248 tcgttcgaaggggtgctctactgcaggcctcactttgaccagctcttcaagaggactgg 306 || || || ||||| | ||||| |||||||||||||| ||||| || ||||| ||||| Sbjct: 253 tcctttgagggggtaatttactgtaggcctcactttgatcagctttttaagagaactgg 311 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 479 taccacaagagctgcttcaaatgctgccatggagggtgcaccatcagcccttcgaattac 538 ||||| ||| |||||||||||||| | |||||||| || || || ||||| || |||||| Sbjct: 490 taccataagggctgcttcaaatgcagtcatggaggctgtacaataagcccatcaaattac 549 Query: 539 atcgcccacgagggcaagctcttctgcaagcaccacca 576 || || || ||||| | ||| | |||||||||||||| Sbjct: 550 attgcacatgagggaaggctttattgcaagcaccacca 587
>gb|AY217117.1| Thinopyrum intermedium NBS-type putative resistance protein mRNA, partial cds Length = 218 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 593 gagaagggaaatttcagccagctcgagaacgatcacga 630 |||||||| ||||||||||||||||||||||| ||||| Sbjct: 198 gagaaggggaatttcagccagctcgagaacgaccacga 161
>gb|AF184109.1|AF184109 Nicotiana tabacum LIM domain protein WLIM1 mRNA, complete cds Length = 898 Score = 54.0 bits (27), Expect = 6e-04 Identities = 93/115 (80%) Strand = Plus / Plus Query: 183 tctaccacaaggcctgcttcaggtgccaccactgcaagggcaccctcaagctcgcgaatt 242 |||| ||||| || || ||||| ||||| |||||||||||||| |||||||| | || | Sbjct: 86 tctatcacaaagcttgtttcagatgccatcactgcaagggcactctcaagcttggcaact 145 Query: 243 acaactcgttcgaaggggtgctctactgcaggcctcactttgaccagctcttcaa 297 |||| || || || || || || ||||| || || |||||||| ||||||||||| Sbjct: 146 acaattcctttgagggagttctatactgtagaccacactttgatcagctcttcaa 200 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 479 taccacaagagctgcttcaaatgctgccatggagg 513 ||||| |||||||||||||||||| |||| ||||| Sbjct: 388 taccataagagctgcttcaaatgcagccacggagg 422
>dbj|AB079513.1| Nicotiana tabacum Ntlim1 mRNA for transcription factor LIM, complete cds Length = 615 Score = 54.0 bits (27), Expect = 6e-04 Identities = 93/115 (80%) Strand = Plus / Plus Query: 183 tctaccacaaggcctgcttcaggtgccaccactgcaagggcaccctcaagctcgcgaatt 242 |||| ||||| || || ||||| ||||| |||||||||||||| |||||||| | || | Sbjct: 89 tctatcacaaagcttgtttcagatgccatcactgcaagggcactctcaagcttggcaact 148 Query: 243 acaactcgttcgaaggggtgctctactgcaggcctcactttgaccagctcttcaa 297 |||| || || || || || || ||||| || || |||||||| ||||||||||| Sbjct: 149 acaattcctttgagggagttctatactgtagaccacactttgatcagctcttcaa 203 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 479 taccacaagagctgcttcaaatgctgccatggagg 513 ||||| |||||||||||||||||| |||| ||||| Sbjct: 391 taccataagagctgcttcaaatgcagccacggagg 425
>gb|AC122175.9| Pan troglodytes clone rp43-99g12, complete sequence Length = 196097 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagctgatc 589 |||||||||||||||||||||||||| Sbjct: 51235 gcaagcaccaccacacccagctgatc 51210
>gb|AF049917.1|AF049917 Petunia x hybrida PGPS/D1 (PGPS/D1) mRNA, complete cds Length = 897 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 404 ggcaccagagagaaatgttttggatgcagcaagacagtctatccaattgagagggttact 463 |||||||| || |||||| |||||||||| || || || ||||||||||||| |||| || Sbjct: 473 ggcaccagggataaatgtgttggatgcagtaaaactgtatatccaattgagaaggtttct 532 Query: 464 gt 465 || Sbjct: 533 gt 534
>gb|AC182395.3| Pan troglodytes BAC clone CH251-484N21 from chromosome 2, complete sequence Length = 176398 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagctgat 588 ||||||||||||||||||||||||| Sbjct: 72702 gcaagcaccaccacacccagctgat 72678
>emb|X64392.1|HASF3DNA H.annuus SF3 gene for transcription factor SF3 Length = 1439 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Plus Query: 494 ttcaaatgctgccatggagggtgcaccatcagcccttcgaattacatcgcccacgagggc 553 ||||||||||| ||||| |||||||| || ||||| || || ||||| || || || ||| Sbjct: 896 ttcaaatgctgtcatggggggtgcactataagcccatcaaactacattgctcatgaaggc 955 Query: 554 aagctcttctgcaagcaccaccaca 578 | ||| | |||||||||||||||| Sbjct: 956 aggctttattgcaagcaccaccaca 980
>gb|AY265973.1| Homo sapiens apoptosis inhibitor 5 (API5) gene, complete cds Length = 33168 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagctgat 588 ||||||||||||||||||||||||| Sbjct: 13367 gcaagcaccaccacacccagctgat 13391
>gb|AC132479.2| Homo sapiens BAC clone RP11-769N11 from 2, complete sequence Length = 168824 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagctgat 588 ||||||||||||||||||||||||| Sbjct: 153292 gcaagcaccaccacacccagctgat 153316
>gb|AC131180.3| Homo sapiens BAC clone RP11-316I2 from 2, complete sequence Length = 132753 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagctgat 588 ||||||||||||||||||||||||| Sbjct: 55202 gcaagcaccaccacacccagctgat 55178
>gb|AC013269.10| Homo sapiens BAC clone RP11-356I10 from 2, complete sequence Length = 165797 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagctgat 588 ||||||||||||||||||||||||| Sbjct: 15321 gcaagcaccaccacacccagctgat 15345
>gb|AC018804.9| Homo sapiens BAC clone RP11-397H17 from 2, complete sequence Length = 195514 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagctgat 588 ||||||||||||||||||||||||| Sbjct: 149695 gcaagcaccaccacacccagctgat 149671
>gb|AC140481.3| Homo sapiens BAC clone RP11-1216L17 from 2, complete sequence Length = 219471 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagctgat 588 ||||||||||||||||||||||||| Sbjct: 147256 gcaagcaccaccacacccagctgat 147280
>gb|AC092602.2| Homo sapiens BAC clone RP11-134G21 from 2, complete sequence Length = 166299 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagctgat 588 ||||||||||||||||||||||||| Sbjct: 154767 gcaagcaccaccacacccagctgat 154791
>gb|AC018865.4| Homo sapiens BAC clone RP11-32C20 from 2, complete sequence Length = 165411 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagctgat 588 ||||||||||||||||||||||||| Sbjct: 144742 gcaagcaccaccacacccagctgat 144766
>gb|AF187104.1|AF187104 Helianthus annuus LIM domain protein PLIM1a (PLIM1a) mRNA, complete cds Length = 912 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Plus Query: 494 ttcaaatgctgccatggagggtgcaccatcagcccttcgaattacatcgcccacgagggc 553 ||||||||||| ||||| |||||||| || ||||| || || ||||| || || || ||| Sbjct: 507 ttcaaatgctgtcatggggggtgcactataagcccatcaaactacattgctcatgaaggc 566 Query: 554 aagctcttctgcaagcaccaccaca 578 | ||| | |||||||||||||||| Sbjct: 567 aggctttattgcaagcaccaccaca 591
>gb|AF187103.1|AF187103 Helianthus annuus LIM domain protein PLIM1b (PLIM1b) mRNA, complete cds Length = 956 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Plus Query: 494 ttcaaatgctgccatggagggtgcaccatcagcccttcgaattacatcgcccacgagggc 553 ||||||||||| ||||| |||||||| || ||||| || || ||||| || || || ||| Sbjct: 473 ttcaaatgctgtcatggggggtgcactataagcccatcaaactacattgctcatgaaggc 532 Query: 554 aagctcttctgcaagcaccaccaca 578 | ||| | |||||||||||||||| Sbjct: 533 aggctttattgcaagcaccaccaca 557
>emb|AJ279864.1|OEU279864 Olea europaea microsatellite DNA at locus ssrOeUA-DCA 15 Length = 382 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 266 tactgcaggcctcactttgaccagctcttcaag 298 ||||||| |||||||||||| |||||||||||| Sbjct: 333 tactgcaagcctcactttgagcagctcttcaag 301
>gb|AC087276.13| Homo sapiens chromosome 11, clone RP11-484D2, complete sequence Length = 204109 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagctgat 588 ||||||||||||||||||||||||| Sbjct: 156645 gcaagcaccaccacacccagctgat 156621 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 56826 gcaccaccacacccagctgat 56846
>ref|XM_473290.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 606 Score = 48.1 bits (24), Expect = 0.035 Identities = 36/40 (90%) Strand = Plus / Plus Query: 479 taccacaagagctgcttcaaatgctgccatggagggtgca 518 |||||||||||||||||||| |||| |||||||| |||| Sbjct: 373 taccacaagagctgcttcaagtgctctcatggaggctgca 412 Score = 40.1 bits (20), Expect = 8.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 263 ctctactgcaggcctcactttgaccagctcttcaag 298 |||||||||| | | |||||||| |||||||||||| Sbjct: 166 ctctactgcaagacccactttgagcagctcttcaag 201
>emb|AL663006.3|OSJN00204 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0039L24, complete sequence Length = 121056 Score = 48.1 bits (24), Expect = 0.035 Identities = 36/40 (90%) Strand = Plus / Minus Query: 479 taccacaagagctgcttcaaatgctgccatggagggtgca 518 |||||||||||||||||||| |||| |||||||| |||| Sbjct: 34528 taccacaagagctgcttcaagtgctctcatggaggctgca 34489 Score = 40.1 bits (20), Expect = 8.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 263 ctctactgcaggcctcactttgaccagctcttcaag 298 |||||||||| | | |||||||| |||||||||||| Sbjct: 35230 ctctactgcaagacccactttgagcagctcttcaag 35195
>emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081C01, complete sequence Length = 140454 Score = 48.1 bits (24), Expect = 0.035 Identities = 36/40 (90%) Strand = Plus / Minus Query: 479 taccacaagagctgcttcaaatgctgccatggagggtgca 518 |||||||||||||||||||| |||| |||||||| |||| Sbjct: 131856 taccacaagagctgcttcaagtgctctcatggaggctgca 131817 Score = 40.1 bits (20), Expect = 8.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 263 ctctactgcaggcctcactttgaccagctcttcaag 298 |||||||||| | | |||||||| |||||||||||| Sbjct: 132558 ctctactgcaagacccactttgagcagctcttcaag 132523
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 48.1 bits (24), Expect = 0.035 Identities = 36/40 (90%) Strand = Plus / Minus Query: 479 taccacaagagctgcttcaaatgctgccatggagggtgca 518 |||||||||||||||||||| |||| |||||||| |||| Sbjct: 26594970 taccacaagagctgcttcaagtgctctcatggaggctgca 26594931 Score = 40.1 bits (20), Expect = 8.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 263 ctctactgcaggcctcactttgaccagctcttcaag 298 |||||||||| | | |||||||| |||||||||||| Sbjct: 26595672 ctctactgcaagacccactttgagcagctcttcaag 26595637
>dbj|AK069907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034M24, full insert sequence Length = 955 Score = 48.1 bits (24), Expect = 0.035 Identities = 36/40 (90%) Strand = Plus / Plus Query: 479 taccacaagagctgcttcaaatgctgccatggagggtgca 518 |||||||||||||||||||| |||| |||||||| |||| Sbjct: 437 taccacaagagctgcttcaagtgctctcatggaggctgca 476 Score = 40.1 bits (20), Expect = 8.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 263 ctctactgcaggcctcactttgaccagctcttcaag 298 |||||||||| | | |||||||| |||||||||||| Sbjct: 230 ctctactgcaagacccactttgagcagctcttcaag 265
>gb|AC128639.13| Papio anubis clone rp41-2d18, complete sequence Length = 173331 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 563 tgcaagcaccaccacacccagct 585 ||||||||||||||||||||||| Sbjct: 81824 tgcaagcaccaccacacccagct 81846
>dbj|AB023479.1| Nicotiana tabacum mRNA for transcription factor Ntlim1, complete cds Length = 957 Score = 46.1 bits (23), Expect = 0.14 Identities = 92/115 (80%) Strand = Plus / Plus Query: 183 tctaccacaaggcctgcttcaggtgccaccactgcaagggcaccctcaagctcgcgaatt 242 |||| ||||| || || ||||| ||||| |||||||||||||| ||||||| | || | Sbjct: 171 tctatcacaaagcttgtttcagatgccatcactgcaagggcactgtcaagcttggcaact 230 Query: 243 acaactcgttcgaaggggtgctctactgcaggcctcactttgaccagctcttcaa 297 |||| || || || || || || ||||| || || |||||||| ||||||||||| Sbjct: 231 acaattcctttgagggagttctatactgtagaccacactttgatcagctcttcaa 285
>dbj|AB079512.1| Nicotiana tabacum Ntlim1 gene for transcription factor LIM, complete cds Length = 1563 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 479 taccacaagagctgcttcaaatgctgccatggagg 513 ||||| |||||||||||||||||| |||| ||||| Sbjct: 1342 taccataagagctgcttcaaatgcagccacggagg 1376
>dbj|AB079511.1| Populus kitakamiensis Pklim1 gene for transcription factor LIM, complete cds Length = 1948 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 254 gaaggggtgctctactgcaggcctcactttgaccagctcttcaagaggactgggagcctc 313 |||||||| |||||||||||||| || ||||| || || ||||| || ||||| || || Sbjct: 910 gaaggggttctctactgcaggccacattttgatcaactgttcaaaagaactggcagtctt 969 Query: 314 gacaagagctt 324 ||||| ||||| Sbjct: 970 gacaaaagctt 980 Score = 44.1 bits (22), Expect = 0.55 Identities = 106/134 (79%) Strand = Plus / Plus Query: 479 taccacaagagctgcttcaaatgctgccatggagggtgcaccatcagcccttcgaattac 538 |||||||| ||||||||||||||| ||| ||||| || || || ||||| || || ||| Sbjct: 1464 taccacaaaagctgcttcaaatgcatccacggaggatgtacaattagcccatcaaactac 1523 Query: 539 atcgcccacgagggcaagctcttctgcaagcaccaccacacccagctgatcaaagagaag 598 || || || || || |||| |||||| |||||||||| ||| || ||||| || ||| Sbjct: 1524 attgcacatgaaggtcgcctctactgcaaacaccaccacaaccaactcatcaaggaaaag 1583 Query: 599 ggaaatttcagcca 612 ||||| || ||||| Sbjct: 1584 ggaaacttgagcca 1597
>ref|XM_466988.1| Oryza sativa (japonica cultivar-group), mRNA Length = 621 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Plus Query: 184 ctaccacaaggcctgcttcaggtgccaccactgcaagggcaccctc 229 |||||||||| | ||||||| |||| |||||||||||| |||||| Sbjct: 87 ctaccacaagacatgcttcaagtgcagccactgcaaggggaccctc 132
>gb|DQ205685.1| Homo sapiens mitochondrial ribosomal protein L37 (MRPL37) gene, complete cds; nuclear gene for mitochondrial product Length = 22165 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 5399 gcaagcaccaccacacccagct 5420
>gb|AC165164.4| Mus musculus BAC clone RP23-117C21 from chromosome 10, complete sequence Length = 189986 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgatcaaag 593 |||||||||||||||||| ||||||| Sbjct: 105450 gcaccaccacacccagctaatcaaag 105425
>gb|AC147337.3| Pan troglodytes BAC clone CH251-104M9 from Y, complete sequence Length = 168027 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 122146 gcaagcaccaccacacccagct 122167
>gb|AC146018.3| Pan troglodytes BAC clone RP43-135A21 from 7, complete sequence Length = 177841 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 567 agcaccaccacacccagctgat 588 |||||||||||||||||||||| Sbjct: 17598 agcaccaccacacccagctgat 17577
>gb|AC009712.22| Homo sapiens chromosome 15, clone RP11-361M10, complete sequence Length = 213746 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 567 agcaccaccacacccagctgat 588 |||||||||||||||||||||| Sbjct: 197811 agcaccaccacacccagctgat 197832
>gb|AC119211.8| Mus musculus chromosome 7, clone RP24-191C15, complete sequence Length = 172286 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 98552 gcaagcaccaccacacccagct 98573
>gb|AC183830.2| Pan troglodytes BAC clone CH251-267I9 from chromosome 7, complete sequence Length = 157720 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgatc 589 |||||||||||||||||||||| Sbjct: 5481 gcaccaccacacccagctgatc 5460
>gb|AC005096.4| Homo sapiens BAC clone CTA-339C12 from 7, complete sequence Length = 185376 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 23066 gcaagcaccaccacacccagct 23045
>gb|AC116552.2| Homo sapiens chromosome 16 clone RP11-21B21, complete sequence Length = 176797 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 143500 gcaagcaccaccacacccagct 143521
>gb|AC146215.2| Pan troglodytes BAC clone CH251-299B14 from Y, complete sequence Length = 163780 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 46948 gcaagcaccaccacacccagct 46969
>gb|AC087778.3| Pan troglodytes clone RP43-176J10, complete sequence Length = 63176 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgatc 589 |||||||||||||||||||||| Sbjct: 54570 gcaccaccacacccagctgatc 54591
>emb|Z85986.1|HS108K11 Human DNA sequence from clone RP1-108K11 on chromosome 6p21 Contains the SFRS3 for splicing factor arginine/serine-rich (SRP20), the STK38 gene for serine/threonine protein kinase (NDR), the 3' end of a gene for a novel protein (2410004NRIK) and a CpG island, complete sequence Length = 145616 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 567 agcaccaccacacccagctgat 588 |||||||||||||||||||||| Sbjct: 124605 agcaccaccacacccagctgat 124584
>emb|Z97056.1|HS434P1 Human DNA sequence from clone RP3-434P1 on chromosome 22, complete sequence Length = 124990 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 13873 gcaagcaccaccacacccagct 13852
>emb|AL627313.16| Human DNA sequence from clone RP11-492M19 on chromosome 1 Contains a novel pseudogene (LOC151871), a novel gene similar to ribosomal protein S6 kinase, 90kDa, polypeptide 1 (RPS6KA1), a chromosome 20 open reading frame 52 (C20orf52) pseudogene and two CpG islands, complete sequence Length = 128342 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 567 agcaccaccacacccagctgat 588 |||||||||||||||||||||| Sbjct: 15660 agcaccaccacacccagctgat 15681
>emb|AL591002.9| Human DNA sequence from clone RP11-527B17 on chromosome 6 Contains part of gene KIAA0229 for a novel Ank, SAM (Sterile alpha motif) and Phosphotyrosine interaction (PTB/PID) domain containing protein and a heat shock 10kD protein 1 (chaperonin 10) (HSPE1) pseudogene, complete sequence Length = 76785 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 3660 gcaagcaccaccacacccagct 3681
>emb|AL365504.33| Human DNA sequence from clone RP11-524I9 on chromosome 9 Contains the 5' end of the STRBP gene for spermatid perinuclear RNA binding protein (FLJ11307), the 5' end of a novel gene for a delta-notch-like protein (FLJ38464), a novel gene (PRO2206) and a CpG island, complete sequence Length = 154612 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 51543 gcaagcaccaccacacccagct 51564
>emb|AL359972.10| Human DNA sequence from clone RP1-105K17 on chromosome Xq13.2-21.1, complete sequence Length = 80630 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 1729 gcaagcaccaccacacccagct 1750
>emb|AL358074.22| Human DNA sequence from clone RP11-423C15 on chromosome 9 Contains the 5' end of the MAPKAP1 gene for mitogen-activated protein kinase associated protein 1, a novel gene, the 5' end of the PBX3 gene for pre-B-cell leukemia transcription factor 3 and three CpG islands, complete sequence Length = 109081 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 317 gcaagcaccaccacacccagct 338
>emb|AL357673.12| Human DNA sequence from clone RP11-446E24 on chromosome 1 Contains a novel protein, two novel genes and the 5' end of the MRPL37 gene for mitochondrial ribosomal protein L37, complete sequence Length = 93717 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 80808 gcaagcaccaccacacccagct 80829
>emb|AL356653.13| Human DNA sequence from clone RP11-570P14 on chromosome 1 Contains the 5' end of the gene for a novel protein (FLJ40160) and a small nuclear ribonucleoprotein D1 polypeptide 16kDa (SNRPD1) pseudogene, complete sequence Length = 16184 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 15401 gcaagcaccaccacacccagct 15422
>emb|AL353135.32| Human DNA sequence from clone RP11-63L7 on chromosome 6 Contains the PROL2 gene for proline rich 2 (proline-rich protein with nuclear targeting signal), the gene for NB4 apoptosis/differentiation related protein (PNAS-145), the gene for serine-arginine repressor protein (35kDa) (SRrp35), the gene for a novel protein similar to putative amidohydrolase, the 3' end of the GABRR1 gene for gamma-aminobutyric acid (GABA) receptor, rho 1 and 3 CpG islands, complete sequence Length = 127653 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 79740 gcaagcaccaccacacccagct 79761
>emb|AL353716.18| Human DNA sequence from clone RP11-501I18 on chromosome 6 Contains the TBCC gene for tubulin-specific chaperone c, part of a novel gene, part of the gene for a novel protein (KIAA0240) and CpG islands, complete sequence Length = 98340 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 76516 gcaagcaccaccacacccagct 76537
>emb|AL354733.15| Human DNA sequence from clone RP11-575L7 on chromosome 9 Contains the 5' end of the gene for protein kinase anchoring protein GKAP42 (FKSG21), a novel gene (DKFZp43D0917), a novel gene (MGC10999), the HNRPK gene for heterogeneous nuclear ribonucleoprotein K (CSBP, TUNP, HNRNPK), three novel genes, the 5' UTR of a novel gene (FLJ12888) and six CpG islands, complete sequence Length = 189579 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 3593 gcaagcaccaccacacccagct 3572
>emb|AL353600.10| Human DNA sequence from clone RP11-90B22 on chromosome 10 Contains the 5' end of the NRP1 gene for neuropilin 1, a novel gene and a CpG island, complete sequence Length = 124540 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 17537 gcaagcaccaccacacccagct 17558
>emb|AL162584.9| Human DNA sequence from clone RP11-12A16 on chromosome 9 Contains part of the MAPKAP1 gene for mitogen-activated protein kinase associated protein 1, a novel gene, a heterogeneous nuclear ribonucleoprotein A1 (HNRP1) pseudogene and two CpG islands, complete sequence Length = 160178 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 158496 gcaagcaccaccacacccagct 158517
>emb|AL160291.31| Human DNA sequence from clone RP11-85G18 on chromosome 10 Contains the 5' end of the YME1L1 gene for YME1-like 1 (S. cerevisiae), the gene for a novel protein kinase domain containing protein (FLJ14813), the gene for endozepine-related protein precursor (DKFZp434A2417) (FLJ32907 KIAA1996), a novel pseudogene (KIAA0563, FLJ34306), the 5' end of a novel pseudogene (FLJ10376) and six CpG islands, complete sequence Length = 155962 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 77969 gcaagcaccaccacacccagct 77990
>emb|AL160266.25| Human DNA sequence from clone RP5-1068F3 on chromosome X, complete sequence Length = 134124 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 133853 gcaagcaccaccacacccagct 133874
>emb|AL160401.12| Human DNA sequence from clone RP11-442J1 on chromosome 6 Contains the 3' end of the BAI3 gene for brain-specific angiogenesis inhibitor 3, complete sequence Length = 121606 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 43216 gcaagcaccaccacacccagct 43237
>emb|AL158823.11| Human DNA sequence from clone RP11-151F5 on chromosome 9 Contains part of the AKAP2 (PALM2) gene for A kinase (PRKA) anchor protein 2 (paralemmin 2), a ribosomal protein L21 (RPL21) pseudogene and a CpG island, complete sequence Length = 175558 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 3719 gcaagcaccaccacacccagct 3740
>gb|AC008083.23| Homo sapiens 12 BAC RP11-493L12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 192046 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 76573 gcaagcaccaccacacccagct 76552
>emb|AL109743.4|HSJ590P13 Human DNA sequence from clone RP4-590P13 on chromosome 1p35.1-36.12 Contains the 3' end of the RPS6KA1 (ribosomal protein S6 kinase, 90kD,polypeptide 1) gene, ESTs, STSs, GSSs and 2 CpG islands, complete sequence Length = 96006 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 567 agcaccaccacacccagctgat 588 |||||||||||||||||||||| Sbjct: 61110 agcaccaccacacccagctgat 61089
>gb|AC007834.40| Homo sapiens 12 BAC RP11-7G5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 210578 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 30307 gcaagcaccaccacacccagct 30286 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 569 caccaccacacccagctgat 588 |||||||||||||||||||| Sbjct: 121495 caccaccacacccagctgat 121476
>gb|AC103874.2| Homo sapiens chromosome 15, clone RP11-907B8, complete sequence Length = 158897 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 567 agcaccaccacacccagctgat 588 |||||||||||||||||||||| Sbjct: 136289 agcaccaccacacccagctgat 136268
>gb|AC010519.8| Homo sapiens chromosome 19 clone LLNLR-261D9, complete sequence Length = 46741 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 44990 gcaagcaccaccacacccagct 44969
>gb|AC008745.7| Homo sapiens chromosome 19 clone CTD-2571L23, complete sequence Length = 180531 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 2075 gcaagcaccaccacacccagct 2054
>gb|AC126696.1| Homo sapiens chromosome 16 clone RP4-536B24, complete sequence Length = 108708 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 37373 gcaagcaccaccacacccagct 37352
>gb|AC023232.16| Homo sapiens chromosome 11, clone RP11-793I11, complete sequence Length = 188868 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 78581 gcaagcaccaccacacccagct 78560
>dbj|BS000598.1| Pan troglodytes chromosome Y clone:PTB-224I01, complete sequences Length = 153754 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 75619 gcaagcaccaccacacccagct 75640
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 22261038 gcaagcaccaccacacccagct 22261017 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 569 caccaccacacccagctgat 588 |||||||||||||||||||| Sbjct: 12467913 caccaccacacccagctgat 12467894 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 caccaccacacccagctgat 588 |||||||||||||||||||| Sbjct: 11945588 caccaccacacccagctgat 11945607 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 569 caccaccacacccagctgat 588 |||||||||||||||||||| Sbjct: 2275599 caccaccacacccagctgat 2275580 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 caccaccacacccagctgat 588 |||||||||||||||||||| Sbjct: 1773727 caccaccacacccagctgat 1773746
>dbj|AK095337.1| Homo sapiens cDNA FLJ38018 fis, clone CTONG2012745, weakly similar to H.sapiens mRNA for Ndr protein kinase Length = 3107 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 567 agcaccaccacacccagctgat 588 |||||||||||||||||||||| Sbjct: 924 agcaccaccacacccagctgat 903
>dbj|AK097944.1| Homo sapiens cDNA FLJ40625 fis, clone THYMU2014068 Length = 2116 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 707 gcaagcaccaccacacccagct 686
>gb|AC123981.18| Pan troglodytes clone rp43-130h22, complete sequence Length = 172816 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 60983 gcaagcaccaccacacccagct 61004
>gb|AC125391.10| Pan troglodytes clone rp43-115b1, complete sequence Length = 155629 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 128469 gcaagcaccaccacacccagct 128490
>gb|AC112249.4| Homo sapiens BAC clone RP11-688H10 from 4, complete sequence Length = 146551 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 90058 gcaagcaccaccacacccagct 90037
>gb|AC021439.9| Homo sapiens chromosome 15, clone RP11-484P15, complete sequence Length = 206030 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 84871 gcaagcaccaccacacccagct 84892
>gb|AY278439.1| Mus musculus receptor tyrosine kinase gene, 5' flanking region Length = 2380 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 144 gcaagcaccaccacacccagct 123
>gb|AC103828.2| Homo sapiens chromosome 11, clone CTD1-2183M20, complete sequence Length = 136372 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 134324 gcaagcaccaccacacccagct 134303
>gb|AC092132.2| Homo sapiens chromosome 16 clone RP11-204E4, complete sequence Length = 166533 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 567 agcaccaccacacccagctgat 588 |||||||||||||||||||||| Sbjct: 16185 agcaccaccacacccagctgat 16206
>gb|AC007540.3| Homo sapiens 12q24.1 BAC RPCI11-128P10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174652 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 123992 gcaagcaccaccacacccagct 124013 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgatcaaa 592 |||||||||||||||||| |||||| Sbjct: 62319 gcaccaccacacccagctcatcaaa 62343
>gb|AC036154.17| Homo sapiens chromosome 17, clone RP11-346N15, complete sequence Length = 55100 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 17233 gcaagcaccaccacacccagct 17212
>gb|AC026467.6| Homo sapiens chromosome 16 clone RP11-410M9, complete sequence Length = 148054 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 20429 gcaagcaccaccacacccagct 20450
>gb|AC026639.6| Homo sapiens chromosome 11, clone RP11-4B7, complete sequence Length = 174711 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgatc 589 |||||||||||||||||||||| Sbjct: 77486 gcaccaccacacccagctgatc 77465
>gb|AC091609.2| Homo sapiens chromosome 1 clone RP11-109I2, complete sequence Length = 183521 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 50753 gcaagcaccaccacacccagct 50774
>gb|AC005089.3| Homo sapiens BAC clone CTA-315H11 from 7, complete sequence Length = 177893 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgatc 589 |||||||||||||||||||||| Sbjct: 173019 gcaccaccacacccagctgatc 172998
>gb|AC163758.3| Pan troglodytes BAC clone CH251-221N15 from chromosome 7, complete sequence Length = 157318 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 12907 gcaagcaccaccacacccagct 12886
>emb|AL512624.5|CNS07EFD Human chromosome 14 DNA sequence BAC C-2311B13 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 154078 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 59309 gcaagcaccaccacacccagct 59330
>emb|AL929601.4|CNS08CCG Human chromosome 14 DNA sequence Partial sequence from BAC R-244H18 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 176156 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 122181 gcaagcaccaccacacccagct 122160
>gb|AC048387.16| Homo sapiens chromosome 8, clone RP11-465K16, complete sequence Length = 193896 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 129095 gcaagcaccaccacacccagct 129074
>gb|AC119193.9| Mus musculus chromosome 7, clone RP24-178L6, complete sequence Length = 162310 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 19148 gcaagcaccaccacacccagct 19169
>gb|AC034251.6| Homo sapiens chromosome 5 clone RP3-508I20, complete sequence Length = 144290 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 111275 gcaagcaccaccacacccagct 111254
>gb|AC148663.1| Macaca mulatta Major Histocompatibility Complex BAC MMU012K22, complete sequence Length = 174897 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagctgatc 589 |||||||||||||| ||||||||||| Sbjct: 148675 gcaagcaccaccacgcccagctgatc 148650
>gb|AC148661.1| Macaca mulatta Major Histocompatibility Complex BAC MMU007H18, complete sequence Length = 215614 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagctgatc 589 |||||||||||||| ||||||||||| Sbjct: 100023 gcaagcaccaccacgcccagctgatc 99998
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Minus Query: 184 ctaccacaaggcctgcttcaggtgccaccactgcaagggcaccctc 229 |||||||||| | ||||||| |||| |||||||||||| |||||| Sbjct: 25759459 ctaccacaagacatgcttcaagtgcagccactgcaaggggaccctc 25759414 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tgctgccatggagggtgcac 519 |||||||||||||||||||| Sbjct: 7027384 tgctgccatggagggtgcac 7027365
>dbj|AP000280.3| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone:CMP21-S12, complete sequence Length = 73687 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 56275 gcaagcaccaccacacccagct 56296
>gb|AC127430.4| Homo sapiens chromosome 3 clone CTD-2563A18, complete sequence Length = 181750 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 152487 gcaagcaccaccacacccagct 152508
>gb|AC018638.5|AC018638 Homo sapiens chromosome 7 clone RP11-274B21, complete sequence Length = 176875 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 567 agcaccaccacacccagctgat 588 |||||||||||||||||||||| Sbjct: 23081 agcaccaccacacccagctgat 23060
>gb|AC106796.3| Homo sapiens chromosome 16 clone RP11-429K17, complete sequence Length = 168892 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 567 agcaccaccacacccagctgat 588 |||||||||||||||||||||| Sbjct: 29276 agcaccaccacacccagctgat 29255
>dbj|AP000039.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 10/28, complete sequence Length = 100000 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 42331 gcaagcaccaccacacccagct 42352
>gb|AC024952.4|AC024952 Homo sapiens chromosome 7 clone RP11-66F23, complete sequence Length = 182426 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 567 agcaccaccacacccagctgat 588 |||||||||||||||||||||| Sbjct: 49513 agcaccaccacacccagctgat 49534
>gb|AC121343.6| Homo sapiens X BAC RP11-438J7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164000 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 16718 gcaagcaccaccacacccagct 16697
>gb|AC011302.3|AC011302 Homo sapiens BAC clone RP11-333E9 from Y, complete sequence Length = 178137 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 166327 gcaagcaccaccacacccagct 166348
>gb|AC022013.3|AC022013 Homo sapiens chromosome 3 clone RP11-83C2 map 3, complete sequence Length = 169258 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 90796 gcaagcaccaccacacccagct 90817
>gb|AC018507.3|AC018507 Homo sapiens chromosome 3 clone RP11-66L17 map 3, complete sequence Length = 173728 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 122477 gcaagcaccaccacacccagct 122498
>emb|AL590763.2|HSXDPB Homo sapiens chromosome X sequence from 6 PACs 1 BAC and 1 cosmid, region GJB1-DXS559 map Xq13.1, complete sequence Length = 248968 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 67373 gcaagcaccaccacacccagct 67394
>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0010C01 Length = 186185 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Minus Query: 184 ctaccacaaggcctgcttcaggtgccaccactgcaagggcaccctc 229 |||||||||| | ||||||| |||| |||||||||||| |||||| Sbjct: 162135 ctaccacaagacatgcttcaagtgcagccactgcaaggggaccctc 162090
>dbj|AP004133.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G03 Length = 106401 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Minus Query: 184 ctaccacaaggcctgcttcaggtgccaccactgcaagggcaccctc 229 |||||||||| | ||||||| |||| |||||||||||| |||||| Sbjct: 6065 ctaccacaagacatgcttcaagtgcagccactgcaaggggaccctc 6020
>dbj|BS000129.1| Pan troglodytes chromosome 22 clone:PTB-242K04, map 22, complete sequences Length = 30054 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 14774 gcaagcaccaccacacccagct 14753
>dbj|AP001741.1| Homo sapiens genomic DNA, chromosome 21q, section 85/105 Length = 39322 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 35401 gcaagcaccaccacacccagct 35380
>dbj|AK130845.1| Homo sapiens cDNA FLJ27335 fis, clone TMS09309 Length = 1313 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 1188 gcaagcaccaccacacccagct 1167
>gb|AC003071.1|AC003071 Homo sapiens BAC clone CTA-85E5 from 22q12.1-qter, complete sequence Length = 150228 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 57869 gcaagcaccaccacacccagct 57890
>gb|AC005074.1|AC005074 Homo sapiens BAC clone CTA-208H19 from 7q11.23, complete sequence Length = 50604 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgatc 589 |||||||||||||||||||||| Sbjct: 14200 gcaccaccacacccagctgatc 14179
>emb|AL391262.3|CNS06C86 Human chromosome 14 DNA sequence BAC R-817G13 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 171296 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 31315 gcaagcaccaccacacccagct 31294
>gb|AC122197.4| Mus musculus BAC clone RP23-55A6 from 10, complete sequence Length = 232763 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgatcaaag 593 |||||||||||||||||| ||||||| Sbjct: 29527 gcaccaccacacccagctaatcaaag 29502
>emb|AL359317.3|CNS05TDQ Human chromosome 14 DNA sequence BAC R-363J20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 208222 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 3849 gcaagcaccaccacacccagct 3870
>dbj|AP000237.3| Homo sapiens genomic DNA, chromosome 21 clone:RP11-269P7, complete sequence Length = 153265 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 10410 gcaagcaccaccacacccagct 10431
>gb|AC006227.1|AC006227 Homo sapiens, clone hRPK.16_A_1, complete sequence Length = 153337 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 141508 gcaagcaccaccacacccagct 141487
>dbj|AP001715.1| Homo sapiens genomic DNA, chromosome 21q, section 59/105 Length = 340000 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 107468 gcaagcaccaccacacccagct 107489
>dbj|AP001706.1| Homo sapiens genomic DNA, chromosome 21q, section 50/105 Length = 340000 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 37629 gcaagcaccaccacacccagct 37650
>dbj|AP002495.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2313N18, complete sequence Length = 131570 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 52484 gcaagcaccaccacacccagct 52463
>gb|AC005725.1|AC005725 Homo sapiens chromosome 17, clone hRPK.680_C_21, complete sequence Length = 197915 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 29871 gcaagcaccaccacacccagct 29850
>gb|AC004242.1|AC004242 Homo sapiens 12q13 PAC RPCI1-316M24 (Roswell Park Cancer Institute Human PAC library) complete sequence Length = 104913 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 76717 gcaagcaccaccacacccagct 76738
>emb|AL355433.6|HS179D22 Homo sapiens chromosome 9 BAC RP11-179D22, complete sequence Length = 177219 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 64454 gcaagcaccaccacacccagct 64433
>gb|AC150597.4| Aotus nancymaae clone CH258-191N23, complete sequence Length = 97432 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 90358 gcaagcaccaccacacccagct 90379
>dbj|AP000529.1| Homo sapiens genomic DNA, chromosome 22q11.2, Cat Eye Syndrome region, clone:c3G11 Length = 37981 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 24284 gcaagcaccaccacacccagct 24305
>dbj|AP000198.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone B355D16-T1073, segment 4/8, complete sequence Length = 100000 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 1364 gcaagcaccaccacacccagct 1343
>dbj|AP000344.1| Homo sapiens genomic DNA, chromosome 22q11.2, clone KB1269D1 Length = 186421 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 9192 gcaagcaccaccacacccagct 9213
>dbj|AP000343.1| Homo sapiens genomic DNA, chromosome 22q11.2, clone KB282B12 Length = 111249 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 89526 gcaagcaccaccacacccagct 89547
>dbj|AP000183.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone Q78C10-f32E9, segment 10/21, complete sequence Length = 100000 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 48307 gcaagcaccaccacacccagct 48328
>dbj|AP000107.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related, Q78C10-149C3 region, segment 10/20, complete sequence Length = 100000 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 48307 gcaagcaccaccacacccagct 48328
>dbj|AP001611.2| Homo sapiens genomic DNA, chromosome 21, clone:P1104C7, MX1-D21S171 region, complete sequence Length = 4601 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 694 gcaagcaccaccacacccagct 673
>dbj|AP000094.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related, B335D16-P10G11 region, segment 4/7 Length = 100000 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 1364 gcaagcaccaccacacccagct 1343
>dbj|AP003717.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-167N4, complete sequences Length = 156370 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 46263 gcaagcaccaccacacccagct 46242
>dbj|AP003531.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-535C12, complete sequences Length = 199384 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 183806 gcaagcaccaccacacccagct 183785
>dbj|AP000915.5| Homo sapiens genomic DNA, chromosome 18p clone:RP11-720L2, complete sequences Length = 188439 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 564 gcaagcaccaccacacccagct 585 |||||||||||||||||||||| Sbjct: 25453 gcaagcaccaccacacccagct 25474
>gb|AC170422.1| Rhesus Macaque BAC CH250-106F22 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 185455 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 3167 gcaccaccacacccagctgat 3187
>gb|AC110880.10| Mus musculus chromosome 7, clone RP24-456G3, complete sequence Length = 162685 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagc 584 ||||||||||||||||||||| Sbjct: 64774 gcaagcaccaccacacccagc 64754
>gb|AF109907.1|DJ534K4 Homo sapiens S164 gene, partial cds; PS1 and hypothetical protein genes, complete cds; and S171 gene, partial cds Length = 216387 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 118830 gcaccaccacacccagctgat 118810
>gb|AC005179.1| Homo sapiens chromosome 5, P1 clone 1041F10 (LBNL H88), complete sequence Length = 59765 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 5044 gcaccaccacacccagctgat 5064
>ref|NG_002433.1| Homo sapiens major histocompatibility complex, class II, DR53 haplotype (DR53) on chromosome 6 Length = 150447 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 148656 gcaccaccacacccagctgat 148636
>gb|AC154431.2| Mus musculus BAC clone RP23-174B22 from chromosome 13, complete sequence Length = 195030 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 794 gcaccaccacacccagctgat 774
>gb|AC164703.3| Mus musculus BAC clone RP23-266K19 from chromosome 7, complete sequence Length = 238433 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 565 caagcaccaccacacccagct 585 ||||||||||||||||||||| Sbjct: 84829 caagcaccaccacacccagct 84809
>ref|XM_322143.1| Neurospora crassa OR74A hypothetical protein (NCU00058.1) partial mRNA Length = 4164 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 486 agagctgcttcaaatgctgccatgg 510 ||||||||||||||||| ||||||| Sbjct: 551 agagctgcttcaaatgcagccatgg 527
>ref|XM_950708.1| Neurospora crassa OR74A hypothetical protein (NCU00058.1) partial mRNA Length = 4164 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 486 agagctgcttcaaatgctgccatgg 510 ||||||||||||||||| ||||||| Sbjct: 551 agagctgcttcaaatgcagccatgg 527
>gb|AC149133.1| Pan troglodytes chromosome X clone RP43-010O16 map human ortholog p11.23 complete sequence Length = 179327 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 59247 gcaccaccacacccagctgat 59227
>gb|AC158789.4| Mus musculus chromosome 5, clone RP23-192C21, complete sequence Length = 218871 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 122135 gcaccaccacacccagctgat 122115
>gb|AY585721.1| Homo sapiens CDC7 cell division cycle 7 (S. cerevisiae) (CDC7) gene, complete cds Length = 28768 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 17988 gcaccaccacacccagctgat 17968
>gb|AY663410.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA00576 MHC class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*030302 allele and MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*0302 allele, complete cds; and MHC class II antigen (HLA-DRB1) gene, partial cds Length = 105171 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 91941 gcaccaccacacccagctgat 91961
>gb|AY663404.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA10540 MHC class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*030302 allele and MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*0302 allele, complete cds; and MHC class II antigen (HLA-DRB1) gene, partial cds Length = 109441 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 97235 gcaccaccacacccagctgat 97255
>gb|AY663393.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA14661 MHC class II antigen (HLA-DQB1) gene and MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*0303 allele, complete cds; and MHC class II antigen (HLA-DRB1) gene, partial cds Length = 78546 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 71119 gcaccaccacacccagctgat 71139
>gb|AC160652.2| Pan troglodytes BAC clone CH251-490H15 from chromosome 6, complete sequence Length = 169342 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 68103 gcaccaccacacccagctgat 68083
>gb|AC073221.9| Homo sapiens BAC clone RP11-543D8 from 7, complete sequence Length = 94027 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 61140 gcaccaccacacccagctgat 61160
>gb|AC005160.1| Homo sapiens BAC clone GS1-572E2 from 7, complete sequence Length = 127178 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 115060 gcaccaccacacccagctgat 115040
>gb|AC146089.2| Pan troglodytes BAC clone RP43-47D18 from 7, complete sequence Length = 178573 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 51218 gcaccaccacacccagctgat 51198
>emb|CT025531.9| Mouse DNA sequence from clone RP23-280C13 on chromosome 9, complete sequence Length = 206038 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 565 caagcaccaccacacccagct 585 ||||||||||||||||||||| Sbjct: 160919 caagcaccaccacacccagct 160899
>gb|AC146204.3| Pan troglodytes BAC clone RP43-25M3 from 7, complete sequence Length = 188265 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 101737 gcaccaccacacccagctgat 101757
>gb|AC004382.1|HUAC004382 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-152E5, complete sequence Length = 217873 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 25030 gcaccaccacacccagctgat 25010
>gb|AC002400.1|HUAC002400 Human Chromosome 16 BAC clone CIT987SK-A-735G6, complete sequence Length = 138839 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 90097 gcaccaccacacccagctgat 90117
>gb|AC002045.1|HUAC002045 Human Chromosome 16 BAC clone CIT987SK-A-589H1, complete sequence Length = 124048 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 13491 gcaccaccacacccagctgat 13471
>gb|AC103810.5| Homo sapiens chromosome 17, clone RP11-927P21, complete sequence Length = 203192 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 5601 gcaccaccacacccagctgat 5621
>gb|AC091296.3| Pan troglodytes clone RP43-109G19, complete sequence Length = 185979 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 42330 gcaccaccacacccagctgat 42350
>gb|AC073310.7| Homo sapiens BAC clone RP11-49G5 from 7, complete sequence Length = 125685 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 34359 gcaccaccacacccagctgat 34379
>gb|AC006000.3| Homo sapiens PAC clone RP4-741M6 from 7, complete sequence Length = 124170 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 34657 gcaccaccacacccagctgat 34677
>gb|AC117805.8| Mus musculus chromosome 19, clone RP24-565L9, complete sequence Length = 156701 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagc 584 ||||||||||||||||||||| Sbjct: 92360 gcaagcaccaccacacccagc 92340
>gb|AC006088.1| Homo sapiens 12q24.1 PAC RP1-305I20 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 122605 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 63393 gcaccaccacacccagctgat 63413
>gb|AC158340.9| Mus musculus chromosome 1, clone RP24-161N8, complete sequence Length = 163123 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 142308 gcaccaccacacccagctgat 142328
>gb|AC183690.3| Cavia porcellus clone CH234-212D11, complete sequence Length = 108490 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 10214 gcaccaccacacccagctgat 10234
>gb|AC102781.5| Mus musculus chromosome 1, clone RP23-271G2, complete sequence Length = 198393 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 107240 gcaccaccacacccagctgat 107220
>gb|AC012184.7| Homo sapiens chromosome 16 clone RP11-529K1, complete sequence Length = 196010 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 564 gcaagcaccaccacacccagctgat 588 |||||||||||||| |||||||||| Sbjct: 105865 gcaagcaccaccacgcccagctgat 105841
>emb|Z98051.7|HS501A4 Human DNA sequence from clone RP3-501A4 on chromosome Xp11.1-11.22 Contains part of the gene for a novel protein similar to PHD finger protein 2 PHF2, complete sequence Length = 7570 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 5650 gcaccaccacacccagctgat 5630
>emb|Z82178.2|HSB79B4 Human DNA sequence from clone SC22CB-79B4 on chromosome 22, complete sequence Length = 43748 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 23613 gcaccaccacacccagctgat 23633
>emb|AL772197.12| Human DNA sequence from clone RP11-24O6 on chromosome X Contains the 5' end of the SH3KBP1 gene for SH3-domain kinase binding protein 1 (CIN85), two novel genes and one CpG island, complete sequence Length = 106342 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 24024 gcaccaccacacccagctgat 24044
>emb|AL731566.7| Human DNA sequence from clone RP11-500G22 on chromosome 10 Contains the 5' end of the ATE1 gene for arginyltransferase 1, a novel gene, the gene for a novel protein (FLJ20003), the 5' end of the TACC2 gene for transforming, acidic coiled-coil containing protein 2 (AZU-1) and three CpG islands, complete sequence Length = 125922 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 89510 gcaccaccacacccagctgat 89530
>emb|AL844527.6| Human DNA sequence from clone DAQB-314F24 on chromosome 6 Contains the 5' end of the COL11A2 gene for collagen type XI alpha 2, the RXRB gene for retinoid X receptor, beta, the SLC39A7 gene for solute carrier family 39 (zinc transporter), member 7, the HSD17B8 gene for hydroxysteroid (17-beta) dehydrogenase 8, the RING1 gene for ring finger protein 1, the ZNF314P pseudogene for zinc finger protein 314, the HTATSF1P pseudogene for HIV TAT specific factor 1, the HCG25 gene for HLA complex group 25, the VPS52 gene for vacuolar protein sorting 52 (yeast), the RPS18 gene for ribosomal protein S18, the B3GALT4 gene for UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 4, the 3'end of the C6orf11 gene for chromosome 6 open reading frame 11, and 7 CpG islands, complete sequence Length = 109523 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 52609 gcaccaccacacccagctgat 52589
>emb|BX296568.4| Human DNA sequence from clone DASS-233C19 on chromosome 6, complete sequence Length = 87738 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 61339 gcaccaccacacccagctgat 61319
>emb|BX248408.4| Human DNA sequence from clone DASS-63A3 on chromosome 6, complete sequence Length = 61953 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 10538 gcaccaccacacccagctgat 10518
>emb|AL732326.4| Human DNA sequence from clone RP11-723P2 on chromosome X Contains the PDHA1 gene for pyruvate dehydrogenase (lipoamide) alpha 1, the 3' end of the gene for a novel protein similar to mitogen-activated protein kinase kinase kinase 5 (MAP3K5) and a CpG island, complete sequence Length = 158420 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 143962 gcaccaccacacccagctgat 143982
>emb|AL672040.10| Human DNA sequence from clone RP11-449L4 on chromosome X, complete sequence Length = 117297 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 75939 gcaccaccacacccagctgat 75959
>emb|AL607042.10| Human DNA sequence from clone RP11-413G1 on chromosome 10, complete sequence Length = 53085 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 10439 gcaccaccacacccagctgat 10419
>emb|AL713971.7| Human DNA sequence from clone XXbac-269C15 on chromosome 6 contains the FABGL gene for hydroxysteroid (17-beta) dehydrogenase 8, the RING1 gene for ring finger protein 1, a zinger finger protein pseudogene, a HIV TAT specific factor 1 (HTATSF1) pseudogene, a novel transcript, the SACML2 gene for SAC2 suppressor of actin mutations 2-like (yeast), the 5' end of the RPS18 gene for ribosomal protein S18 and four CpG islands, complete sequence Length = 70621 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 19798 gcaccaccacacccagctgat 19778
>emb|AL645940.4| Human DNA sequence from clone XXbac-157A10 on chromosome 6 contains the 3' end of the gene for a novel protein similar to major histocompatibility complex, class II, DP beta 2 pseudogene, a major histocompatibility complex, class II, DP beta 1 pseudogene, two putative novel transcripts, the COL11A2 gene for collagen, type XI, alpha 2, the RXRB gene for retinoid X receptor, beta, the HKE4 gene for HLA-class II region expressed gene KE4, the FABGL gene for hydroxysteroid (17-beta) dehydrogenase 8, the RING1 gene for ring finger protein 1, a zinger finger protein pseudogene, a HIV TAT specific factor 1 (HTATSF1) pseudogene, a novel transcript, the SACM2L gene for SAC2 suppressor of actin mutations 2-like (yeast), the 5' end of the RPS18 gene for ribosomal protein S18 and six CpG islands, complete sequence Length = 158033 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 109177 gcaccaccacacccagctgat 109157
>emb|AL591806.16| Human DNA sequence from clone RP11-544M22 on chromosome 1 Contains the 3' end of a novel gene, the 5' end of the ITLN2 gene for intelectin 2, the F11R gene for F11 receptor, the gene for KAT protein, the USF1 gene for upstream transcription factor 1, the gene for a novel protein, the PVRL4 gene for poliovirus receptor-related 4, a novel gene, the gene for a novel protein (MGC33338), the PFDN2 gene for prefoldin 2, the NIT1 gene for nitrilase 1 and the DEDD gene for death effector domain containing, complete sequence Length = 200822 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 132457 gcaccaccacacccagctgat 132477
>emb|AL592295.25| Human DNA sequence from clone RP11-122G18 on chromosome 1 Contains the 3' end of a novel gene, the MPZ gene for myelin protein zero (Charcot-Marie-Tooth neuropathy 1B), the SDHC gene for succinate dehydrogenase complex subunit C integral membrane protein 15kDa, the gene for a novel protein, a novel gene, a pseudogene similar to part of ribonucleotide reductase M2 polypeptide (RRM2), a ribosomal protein S2 (RPS2) pseudogene and two CpG islands, complete sequence Length = 162189 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 95066 gcaccaccacacccagctgat 95086
>emb|AL591431.8| Human DNA sequence from clone RP11-1057F13 on chromosome Xq21.1-21.2 Contains the 5' end of a novel pseudogene, gene MGC26999 and a CpG island, complete sequence Length = 151017 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 39842 gcaccaccacacccagctgat 39862
>emb|AL596342.3| Human DNA sequence from clone RP11-198A7 on chromosome 1 Contains the 5' end of the RGS18 gene for regulator of G-protein signalling 18, complete sequence Length = 154968 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 138977 gcaccaccacacccagctgat 138997
>emb|AL590666.8| Human DNA sequence from clone RP11-66D17 on chromosome 1 Contains the 3' end of the SH2D2A gene for SH2 domain protein 2A, the PRCC gene for papillary renal cell carcinoma (translocation-associated), the HDGF gene for hepatoma-derived growth factor (high-mobility group protein 1-like), the MRPL24 gene for mitochondrial ribosomal protein L24, the gene for CGI-41 protein (CGI-41), a novel gene (FLJ12671), a novel gene, the CRABP2 gene for cellular retinoic acid binding protein 2, a novel gene, the gene for NES nestin, the 5' end of a novel gene, the 3' end of the BCAN gene for brevican and 5 CpG islands, complete sequence Length = 160597 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 142730 gcaccaccacacccagctgat 142750
>emb|AL589723.7| Human DNA sequence from clone RP11-204B7 on chromosome 6 Contains the TPMT gene for thiopurine S-methyltransferase, the gene for a novel protein similar to (TAT-interactive protein, 72-KD; tripartite motif protein TRIM32; zinc-finger protein HT2A), complete sequence Length = 147927 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 31578 gcaccaccacacccagctgat 31598
>gb|AC183921.2| Pan troglodytes BAC clone CH251-617M1 from chromosome unknown, complete sequence Length = 188195 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 122939 gcaccaccacacccagctgat 122959
>emb|AL513526.19| Human DNA sequence from clone RP11-14N7 on chromosome 1 Contains the 3' end of a myeloid/lymphoid or mixed-lineage leukemia 3 (MLL3) pseudogene, a seven transmembrane helix receptor pseudogene, the 5' end of a novel gene and a CpG island, complete sequence Length = 57598 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 45317 gcaccaccacacccagctgat 45337
>emb|AL451165.19| Human DNA sequence from clone RP11-140K17 on chromosome 6 Contain the 5' end of gene FLJ32402, an H+ transporting lysosomal ATPase (vacuolar proton pump) 14kD (ATP6S14) pseudogene and a CpG island, complete sequence Length = 38833 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 24020 gcaccaccacacccagctgat 24040
>emb|AL450998.19| Human DNA sequence from clone RP11-169K16 on chromosome 1 Contains the 3' end of the gene for a novel RUN and PH domain-containing protein (KIAA0842), the 5' end of a novel gene, two genes for a novel proteins, a novel gene, the gene for filamin-binding LIM protein-1 (FBLP-1), a ribosomal protein L12 (RPL12) pseudogene, a ubiquinol-cytochrome c reductase hinge protein (UQCRH) pseudogene, a ribosomal protein S16 (RPS16) pseudogene, a novel gene (FLJ42024), the 5' end of the gene for SMART/HDAC1 associated repressor protein (SHARP) and three CpG islands, complete sequence Length = 163108 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 140947 gcaccaccacacccagctgat 140927
>emb|AL512329.17| Human DNA sequence from clone RP11-157J24 on chromosome 6 Contains a E74-like factor 2 (ets domain transcription factor) (ELF2) pseudogene, complete sequence Length = 72333 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 6013 gcaccaccacacccagctgat 6033
>emb|AL512268.10| Human DNA sequence from clone RP11-477A22 on chromosome X Contains a CpG island, complete sequence Length = 26359 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 7029 gcaccaccacacccagctgat 7009
>emb|AL513220.9| Human DNA sequence from clone RP11-566C13 on chromosome 1 Contains the 5' end of the gene for nucleolar GTPase (HUMAUANTIG), the gene for a novel protein (FLJ40906) and a CpG island, complete sequence Length = 94638 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 37198 gcaccaccacacccagctgat 37218
>emb|AL451083.5| Human DNA sequence from clone RP11-286F20 on chromosome 1 Contains a novel gene (KIAA1383) and a CpG island, complete sequence Length = 98078 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 38325 gcaccaccacacccagctgat 38345
>emb|AL451107.6| Human DNA sequence from clone RP11-14C22 on chromosome 10 Contains the gene for a novel protein similar to lysozyme C-1 (1 4-beta-N-acylmuramidase C EC 3.2.1.17) (MGC33408), three novel genes and a supervillin pseudogene (SVIL), complete sequence Length = 172779 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 117807 gcaccaccacacccagctgat 117827
>emb|AL445704.18| Human DNA sequence from clone RP11-99F4 on chromosome 1 Contains the 5' end of a novel gene (FLJ40773) and a CpG island, complete sequence Length = 163621 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 57865 gcaccaccacacccagctgat 57845
>emb|AL391827.18| Human DNA sequence from clone RP11-63G20 on chromosome 10 Contains the 5' end of a novel gene (FLJ13114 FLJ40653) and two CpG islands, complete sequence Length = 183430 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 41388 gcaccaccacacccagctgat 41408
>emb|AL391497.9| Human DNA sequence from clone RP11-302M6 on chromosome 1 Contains the 3' end of the LRRC5 gene for leucine rich repeat containing 5, a two novel genes, a novel pseudogene, the 5' end of a novel gene (FLJ20403) and a CpG island, complete sequence Length = 189762 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 143507 gcaccaccacacccagctgat 143487
>emb|AL391121.29| Human DNA sequence from clone RP11-47A8 on chromosome 10 Contains the 3' end of the SUFU gene for suppressor of fused homolog (Drosophila), the TRIM8 gene for tripartite motif-containing 8, the ARL3 gene for ADP-ribosylation factor-like 3, the SFXN2 gene for sideroflexin 2 and three CpG islands, complete sequence Length = 166600 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 47788 gcaccaccacacccagctgat 47768
>emb|AL365444.11| Human DNA sequence from clone RP11-115P16 on chromosome 1 Contains the 3' UTR of a novel gene (DKFZp761P211), the ITPKB gene for inositol 1,4,5-trisphosphate 3-kinase B, two novel genes, a ribosomal protein S27 (metallopanstimulin 1) (RPS27) pseudogene and a CpG island, complete sequence Length = 181144 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 65519 gcaccaccacacccagctgat 65499
>emb|AL359267.37| Human DNA sequence from clone RP11-384P3 on chromosome 10 Contains the 5' end of the ANK3 gene for ankyrin 3, node of Ranvier (ankyrin G), complete sequence Length = 119526 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 565 caagcaccaccacacccagct 585 ||||||||||||||||||||| Sbjct: 58964 caagcaccaccacacccagct 58944
>emb|AL357556.18| Human DNA sequence from clone RP11-517I24 on chromosome 1 Contains a dentatorubral-pallidoluysian atrophy (atrophin-1) (DRPLA) processed pseudogene and the 5' end of the TBCE gene for tubulin-specific chaperone e protein, complete sequence Length = 51407 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 13930 gcaccaccacacccagctgat 13950
>emb|AL358117.11| Human DNA sequence from clone RP11-325K2 on chromosome 9 Contains a CpG island, complete sequence Length = 54787 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 17610 gcaccaccacacccagctgat 17630
>emb|AL359074.12| Human DNA sequence from clone RP11-137L10 on chromosome 10 Contains the 5' end of the PPP3CB gene for protein phosphatase 3 (formerly 2B) catalytic subunit beta isoform (calcineurin A beta), two novel genes (FLJ37318), the 3' end of a novel gene, a ribosomal protein S26 (RPS26) pseudogene and a CpG island, complete sequence Length = 152161 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 76439 gcaccaccacacccagctgat 76419
>emb|AL355598.26| Human DNA sequence from clone RP11-435O11 on chromosome 10 Contains the EIF3S10 gene for eukaryotic translation initiation factor 3, subunit 10 theta, 150/170kDa, the gene for a novel protein similar to uncharacterized hypothalamus protein HT011, the 3' end of a novel gene and three CpG islands, complete sequence Length = 128228 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 35115 gcaccaccacacccagctgat 35135
>emb|AL356133.17| Human DNA sequence from clone RP11-337A23 on chromosome 9 Contains a novel gene (FLJ13657), the PLAA gene for phospholipase A2-activating protein (PLAP), a novel gene, the 5' end of capillary morphogenesis protein 1 (CMG-1, FLJ22621)(CMG1) and 3 CpG islands, complete sequence Length = 187805 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 26907 gcaccaccacacccagctgat 26887
>emb|AL355871.6| Human DNA sequence from clone RP11-47K11 on chromosome 1p21.3-22.3 Contains the CDC7 gene for CDC7 cell division cycle 7 (S. cerevisiae) and a novel pseudogene, complete sequence Length = 44564 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 17429 gcaccaccacacccagctgat 17409
>emb|AL355390.4| Human DNA sequence from clone RP11-512C24 on chromosome 13 Contains a 60S ribosomal protein 21 (RPL21) pseudogene and a novel gene, complete sequence Length = 158951 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 99304 gcaccaccacacccagctgat 99284
>emb|AL158076.20| Human DNA sequence from clone RP11-350G13 on chromosome 9q21.32-22.32 Contains a laminin receptor 1 (ribosomal protein SA, 67kDa) (LAMR1) pseudogene and a CpG island, complete sequence Length = 114420 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 47309 gcaccaccacacccagctgat 47329
>emb|AL161912.15| Human DNA sequence from clone RP11-403N16 on chromosome 9 Contains a novel pseudogene and a novel gene, complete sequence Length = 102624 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 86741 gcaccaccacacccagctgat 86761
>emb|AL159977.10| Human DNA sequence from clone RP11-428O18 on chromosome 13 Contains the RPL21 gene for ribosomal protein L21 (60S ribosomal protein L21, L21), a novel gene for a Ras family protein similar to 1110065D03RIK, a novel gene, the 5' end of novel gene and two CpG islands, complete sequence Length = 173965 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 145066 gcaccaccacacccagctgat 145046
>emb|AL139405.11| Human DNA sequence from clone RP11-393E10 on chromosome 10 Contains the 5' end of a variant of the gene for a novel protein (FLJ10210) and the 3' end of the gene for a novel protein (MGC11034), complete sequence Length = 179829 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 142859 gcaccaccacacccagctgat 142879
>emb|AL138894.11| Human DNA sequence from clone RP11-28O4 on chromosome 9 Contains the 5' end of the DBCCR1 gene for deleted in bladder cancer chromosome region candidate 1 (IB3089A) and a CpG island, complete sequence Length = 152366 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 122938 gcaccaccacacccagctgat 122958
>emb|AL136526.27| Human DNA sequence from clone RP11-151A6 on chromosome 13q32.21-33.3 Contains the 3' end of the PCCA gene for propionyl Coenzyme A carboxylase alpha polypeptide, the 3' end of a novel gene, a novel gene for a protein similar to ribosomal protein 26, the 3' end of a novel gene, a novel gene and a CpG island, complete sequence Length = 179804 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 115309 gcaccaccacacccagctgat 115289
>emb|AL137074.17| Human DNA sequence from clone RP11-476B13 on chromosome 9 Contains the 5' end of the C9orf12 gene for chromosome 9 open reading frame 12, a ribosomal protein L21 (RPL21) pseudogene, the 3' end of the gene for coiled-coil protein (BICD2) (KIAA0699) and three CpG islands, complete sequence Length = 83039 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 57777 gcaccaccacacccagctgat 57797
>gb|AC127025.7| Homo sapiens chromosome 17, clone CTD-2646J6, complete sequence Length = 141061 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 107683 gcaccaccacacccagctgat 107663
>emb|AL137060.13| Human DNA sequence from clone RP11-34F20 on chromosome 13 Contains the 3' end of the RFP2 gene for ret finger protein 2, the DLEU2 gene for deleted in lymphocytic leukemia 2 (LEU2 BCMSUN), the 5' end of the DLEU1 gene for deleted in lymphocytic leukemia 1 (BCMS LEU1), a ribosomal protein L18 (RPL18) pseudogene, a novel gene and four CpG islands, complete sequence Length = 154887 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 24790 gcaccaccacacccagctgat 24770
>emb|AL136358.13| Human DNA sequence from clone RP11-183L8 on chromosome 13 Contains the 5' end of the LHFP gene for lipoma HMGIC fusion partner and a CpG island, complete sequence Length = 120507 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 43457 gcaccaccacacccagctgat 43437
>emb|AL136231.12| Human DNA sequence from clone RP11-6J24 on chromosome 9p24.1-24.3 Contains the 3' end of the SLC1A1 gene for solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), the 5' end of a novel gene (FLJ10058), the gene for Hsp90-associating relative of Cdc37 (HARC) (FLJ20639), the 3' end of the AK3L1 gene for adenylate kinase 3 like 1 (AK3), a ribosomal protein S6 (RPS6) pseudogene and 3 CpG islands, complete sequence Length = 160012 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 115158 gcaccaccacacccagctgat 115138
>emb|AL137022.8| Human DNA sequence from clone RP11-344A7 on chromosome 9p21.2-22.3 Contains the 5' end of a novel gene, a histone H3 pseudogene, and a CpG island, complete sequence Length = 169854 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 94104 gcaccaccacacccagctgat 94124
>emb|AL121991.50|HSDJ675E8 Human DNA sequence from clone RP4-675E8 on chromosome 1p34.1-35.3 Contains the 3' end of EIF3S2 gene for eukaryotic translation initiation factor 3, subunit 2 beta, the LCK gene for lymphocyte-specific protein tyrosine kinase, a novel gene, a novel gene (MGC10820) and two CpG islands, complete sequence Length = 61515 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 37943 gcaccaccacacccagctgat 37923
>gb|AC026366.20| Homo sapiens 12 BAC RP11-139O18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164429 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 164384 gcaccaccacacccagctgat 164364
>emb|AL133346.10| Human DNA sequence from clone RP1-215F14 on chromosome 6q22.31-23.3, complete sequence Length = 52920 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 41798 gcaccaccacacccagctgat 41818
>emb|AL133387.8| Human DNA sequence from clone RP11-107I14 on chromosome 10 Contains the 3' end of a novel gene, three novel genes (FLJ34886), the 5' end of the BTRC gene for beta-transducin repeat containing and four CpG islands, complete sequence Length = 157912 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 18792 gcaccaccacacccagctgat 18812
>emb|AL133412.7| Human DNA sequence from clone RP11-78H18 on chromosome 9q22.1-22.33 Contains the 5' end of the TNFSF15 gene for tumor necrosis factor (ligand) superfamily, member 15 (TL1, VEG1), a PRP4 pre-mRNA processing factor 4 homolog B (PR4H, Prp4, PRP4H, PRP4K, KIAA0536) (PRPF4B) pseudogene and the TNFSF8 gene for tumor necrosis factor (ligand) superfamily, member 8 (CD153, CD30L, CD30LG), complete sequence Length = 158717 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 95583 gcaccaccacacccagctgat 95563
>emb|AL121978.5|HSJ520B18 Human DNA sequence from clone RP3-520B18 on chromosome 6p24.1-25.3 Contains the 5' end of the gene for phenylalanine-tRNA synthetase (FARS1), a microtubule-associated protein 1A/1B light chain 3 pseudogene and a CpG island, complete sequence Length = 148385 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gcaccaccacacccagctgat 588 ||||||||||||||||||||| Sbjct: 130803 gcaccaccacacccagctgat 130783 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,193,589 Number of Sequences: 3902068 Number of extensions: 5193589 Number of successful extensions: 235658 Number of sequences better than 10.0: 910 Number of HSP's better than 10.0 without gapping: 913 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 228814 Number of HSP's gapped (non-prelim): 6818 length of query: 634 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 611 effective length of database: 17,143,297,704 effective search space: 10474554897144 effective search space used: 10474554897144 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
