ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags27j17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_472717.1| Oryza sativa (japonica cultivar-group), predic... 74 7e-10
2dbj|AK073427.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 7e-10
3dbj|AK066187.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 7e-10
4dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 68 4e-08
5dbj|AP005903.3| Oryza sativa (japonica cultivar-group) genomic D... 68 4e-08
6dbj|AK102054.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 4e-08
7dbj|AK099488.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 4e-08
8dbj|AK101647.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 2e-07
9ref|NM_187649.1| Oryza sativa (japonica cultivar-group), predic... 60 1e-05
10dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 60 1e-05
11dbj|AP005729.3| Oryza sativa (japonica cultivar-group) genomic D... 60 1e-05
12dbj|AP005550.3| Oryza sativa (japonica cultivar-group) genomic D... 60 1e-05
13gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 60 1e-05
14emb|AL732533.4|CNS08C98 Oryza sativa chromosome 12, . BAC OSJNBa... 60 1e-05
15emb|AL731584.3|OSJN00224 Oryza sativa genomic DNA, chromosome 4,... 58 4e-05
16emb|AL662937.4|OSJN00140 Oryza sativa genomic DNA, chromosome 4,... 58 4e-05
17dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
18ref|NM_185894.1| Oryza sativa (japonica cultivar-group), mRNA 54 6e-04
19ref|XM_472683.1| Oryza sativa (japonica cultivar-group), predic... 54 6e-04
20emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromosome 4,... 54 6e-04
21dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 54 6e-04
22dbj|AP005455.5| Oryza sativa (japonica cultivar-group) genomic D... 54 6e-04
23ref|NM_195726.1| Oryza sativa (japonica cultivar-group) hypothet... 52 0.002
24gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 52 0.002
25gb|AC099774.6| Oryza sativa chromosome 10 BAC OSJNBa0073L20 geno... 52 0.002
26gb|AC090486.3| Genomic sequence for Oryza sativa (japonica cult... 52 0.002
27dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
28dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
29dbj|AK121936.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
30dbj|AK100836.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
31gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
32gb|AC113930.2| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
33ref|XM_479331.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.010
34ref|XM_479329.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.010
35dbj|AP003822.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.010
36dbj|AK069929.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.010
37dbj|AK066044.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.010
38gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.038
39dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.038
40gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 48 0.038
41dbj|AK066342.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.59
42gb|AC157546.7| Mus musculus chromosome 19, clone RP23-325I11, co... 42 2.3
43gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 40 9.3
44gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 40 9.3
45gb|AC124388.4| Mus musculus BAC clone RP24-426O7 from chromosome... 40 9.3
46gb|AF490259.2| Chikungunya virus strain Ross, complete genome 40 9.3
47gb|AY358831.1| Homo sapiens clone DNA142930 MUC13 (UNQ6194) mRNA... 40 9.3
48gb|AC106914.5| Rattus norvegicus BAC CH230-12M19 (Children's Ho... 40 9.3
49gb|DQ443544.1| Chikungunya virus strain LR2006_OPY1, complete ge... 40 9.3
50ref|NM_033049.2| Homo sapiens mucin 13, cell surface associated ... 40 9.3
51gb|AC010303.7| Homo sapiens chromosome 5 clone CTB-37A13, comple... 40 9.3
52gb|AC060809.7| Homo sapiens chromosome 15, clone RP11-404B13, co... 40 9.3
53gb|AC023034.9| Homo sapiens, clone RP11-499F3, complete sequence 40 9.3
54gb|AC008449.6| Homo sapiens chromosome 5 clone CTC-341A9, comple... 40 9.3
55gb|AF286113.1|AF286113 Homo sapiens transmembrane mucin MUC13 (M... 40 9.3
56gb|AF294917.1|AF294917 Aplysia californica ribosomal protein S6 ... 40 9.3
57gb|AC026342.34| Homo sapiens 3 BAC RP11-559L12 (Roswell Park Can... 40 9.3
58ref|XM_573444.1| PREDICTED: Rattus norvegicus similar to specifi... 40 9.3
59gb|AF369024.2| Chikungunya virus strain S27-African prototype, c... 40 9.3
60emb|X80774.1|SGPREPG Streptomyces ghanaensis plasmid DNA for prg... 40 9.3
61gb|AC147473.3| Mus musculus BAC clone RP24-353P11 from 13, compl... 40 9.3
62emb|AL672254.9| Mouse DNA sequence from clone RP23-409H23 on chr... 40 9.3
63dbj|AB035807.1| Homo sapiens DRCC1 mRNA for down-regulated in co... 40 9.3
64dbj|AP004606.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 9.3 
>ref|XM_472717.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1446

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                    
Query: 444 gatgatcccatcattgtggaacagggttctcttattgagatgactggccctaagcga 500
           |||||||||||||||||||| |||||||| || || || ||||||||||||||||||
Sbjct: 868 gatgatcccatcattgtggagcagggttccctcatcgaaatgactggccctaagcga 924



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                        
Query: 536  tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 595
            ||||||||| ||||||| |||||| | ||| || |||||||||||||| || ||||||||
Sbjct: 960  tgacatgagaatcaagacaggagaacgagaggaagatgatctacaactgattgatggtgc 1019

             
Query: 596  a 596
            |
Sbjct: 1020 a 1020
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>dbj|AK073427.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044A13, full
            insert sequence
          Length = 2846

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                     
Query: 444  gatgatcccatcattgtggaacagggttctcttattgagatgactggccctaagcga 500
            |||||||||||||||||||| |||||||| || || || ||||||||||||||||||
Sbjct: 1090 gatgatcccatcattgtggagcagggttccctcatcgaaatgactggccctaagcga 1146



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                        
Query: 536  tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 595
            ||||||||| ||||||| |||||| | ||| || |||||||||||||| || ||||||||
Sbjct: 1182 tgacatgagaatcaagacaggagaacgagaggaagatgatctacaactgattgatggtgc 1241

             
Query: 596  a 596
            |
Sbjct: 1242 a 1242
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>dbj|AK066187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058P10, full
            insert sequence
          Length = 1829

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                     
Query: 444  gatgatcccatcattgtggaacagggttctcttattgagatgactggccctaagcga 500
            |||||||||||||||||||| |||||||| || || || ||||||||||||||||||
Sbjct: 1155 gatgatcccatcattgtggagcagggttccctcatcgaaatgactggccctaagcga 1211



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                        
Query: 536  tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 595
            ||||||||| ||||||| |||||| | ||| || |||||||||||||| || ||||||||
Sbjct: 1247 tgacatgagaatcaagacaggagaacgagaggaagatgatctacaactgattgatggtgc 1306

             
Query: 596  a 596
            |
Sbjct: 1307 a 1307
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                           
Query: 531     gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagat 590
               ||||||||||||||||| || |||||||| | |||||||||||||||| |||| || |||
Sbjct: 4938881 gagtttgacatgaggataaaaaaaggagatcgagaagaggatgatctagaactgattgat 4938822

                 
Query: 591     gg 592
               ||
Sbjct: 4938821 gg 4938820



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                 
Query: 531     gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctaca 580
               ||||||||||||||||| || ||||||||||||||| | ||||| |||||
Sbjct: 3446991 gagtttgacatgaggataaaaaaaggagagcaagaaaaagatgacctaca 3446942



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 655     attgtggcgcggttgacatcacttt 679
               |||||||||| ||||||||||||||
Sbjct: 4938754 attgtggcgcagttgacatcacttt 4938730
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>dbj|AP005903.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1012G11
          Length = 167168

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                          
Query: 531    gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagat 590
              ||||||||||||||||| || |||||||| | |||||||||||||||| |||| || |||
Sbjct: 121413 gagtttgacatgaggataaaaaaaggagatcgagaagaggatgatctagaactgattgat 121354

                
Query: 591    gg 592
              ||
Sbjct: 121353 gg 121352



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 655    attgtggcgcggttgacatcacttt 679
              |||||||||| ||||||||||||||
Sbjct: 121286 attgtggcgcagttgacatcacttt 121262
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>dbj|AK102054.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082C15, full
           insert sequence
          Length = 1326

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                       
Query: 531 gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagat 590
           ||||||||||||||||| || |||||||| | |||||||||||||||| |||| || |||
Sbjct: 718 gagtttgacatgaggataaaaaaaggagatcgagaagaggatgatctagaactgattgat 777

             
Query: 591 gg 592
           ||
Sbjct: 778 gg 779



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 444 gatgatcccatcattgtggaacagggttctcttattgagatgactggccctaagcga 500
           |||||||||||||| ||| | |||||||||   ||||| |||| |||||||||||||
Sbjct: 632 gatgatcccatcatcgtgaagcagggttcttgcattgaaatgattggccctaagcga 688



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 655 attgtggcgcggttgacatcacttt 679
           |||||||||| ||||||||||||||
Sbjct: 845 attgtggcgcagttgacatcacttt 869
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>dbj|AK099488.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026J10, full
            insert sequence
          Length = 4054

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                        
Query: 531  gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagat 590
            ||||||||||||||||| || |||||||| | |||||||||||||||| |||| || |||
Sbjct: 3049 gagtttgacatgaggataaaaaaaggagatcgagaagaggatgatctagaactgattgat 3108

              
Query: 591  gg 592
            ||
Sbjct: 3109 gg 3110



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 655  attgtggcgcggttgacatcacttt 679
            |||||||||| ||||||||||||||
Sbjct: 3176 attgtggcgcagttgacatcacttt 3200
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>dbj|AK101647.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033055P18, full
            insert sequence
          Length = 3322

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                     
Query: 444  gatgatcccatcattgtggaacagggttctcttattgagatgactggccctaagcga 500
            |||||||||||||||||||| |||||||| || || || |||||||| |||||||||
Sbjct: 1042 gatgatcccatcattgtggagcagggttccctcatcgaaatgactggacctaagcga 1098



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                        
Query: 536  tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 595
            ||||||||| ||||||| |||||| | ||| || |||||||||||||| || ||||||||
Sbjct: 1134 tgacatgagaatcaagacaggagaacgagaggaagatgatctacaactgattgatggtgc 1193

             
Query: 596  a 596
            |
Sbjct: 1194 a 1194
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>ref|NM_187649.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2874

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                      
Query: 440  cagagatgatcccatcattgtggaacagggttctcttattgagatgactggccctaag 497
            ||||||||||||||||   ||| | |||||||||||||| || |||||||||||||||
Sbjct: 2382 cagagatgatcccatcgccgtgaaccagggttctcttatcgaaatgactggccctaag 2439



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                              
Query: 531  gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctaca 580
            |||||||||||||| ||||| |  || ||| ||||||| |||||||||||
Sbjct: 2473 gagtttgacatgagaatcaaaactggggagaaagaagaagatgatctaca 2522
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                                 
Query: 531     gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctaca 580
               |||||||||||||| |||||||| || ||| ||||||| |||||||||||
Sbjct: 6975053 gagtttgacatgagaatcaagaatggggagaaagaagaagatgatctaca 6975102



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                
Query: 465     cagggttctcttattgagatgactggccctaag 497
               ||||||||| ||||||| |||||||||||||||
Sbjct: 6974987 cagggttctattattgaaatgactggccctaag 6975019
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>dbj|AP005729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0069P02
          Length = 163033

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                
Query: 531    gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctaca 580
              ||||||||||||||||| || ||||||||||||||| | ||||| |||||
Sbjct: 162923 gagtttgacatgaggataaaaaaaggagagcaagaaaaagatgacctaca 162874
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>dbj|AP005550.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1058_F03
          Length = 150486

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                
Query: 531    gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctaca 580
              ||||||||||||||||| || ||||||||||||||| | ||||| |||||
Sbjct: 115472 gagtttgacatgaggataaaaaaaggagagcaagaaaaagatgacctaca 115423
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                                 
Query: 531     gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctaca 580
               |||||||||||||| |||||||| || ||| ||||||| |||||||||||
Sbjct: 6974932 gagtttgacatgagaatcaagaatggggagaaagaagaagatgatctaca 6974981



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                
Query: 465     cagggttctcttattgagatgactggccctaag 497
               ||||||||| ||||||| |||||||||||||||
Sbjct: 6974866 cagggttctattattgaaatgactggccctaag 6974898
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>emb|AL732533.4|CNS08C98 Oryza sativa chromosome 12, . BAC OSJNBa0084K07 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 147611

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                
Query: 531    gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctaca 580
              |||||||||||||| |||||||| || ||| ||||||| |||||||||||
Sbjct: 105160 gagtttgacatgagaatcaagaatggggagaaagaagaagatgatctaca 105111



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                               
Query: 465    cagggttctcttattgagatgactggccctaag 497
              ||||||||| ||||||| |||||||||||||||
Sbjct: 105226 cagggttctattattgaaatgactggccctaag 105194
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>emb|AL731584.3|OSJN00224 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006M15,
             complete sequence
          Length = 143109

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                         
Query: 536   tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 595
             ||||||||| ||||||| |||||| | ||| || |||||||||||||| || ||||||||
Sbjct: 98941 tgacatgagaatcaagacaggagaacgagaggaagatgatctacaactgattgatggtgc 98882

              
Query: 596   a 596
             |
Sbjct: 98881 a 98881



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                         
Query: 536   tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 595
             ||||||||| ||||||| |||||| | ||| || |||||||||||||| || ||||||||
Sbjct: 73814 tgacatgagaatcaagacaggagaacgagaggaagatgatctacaactgattgatggtgc 73755

              
Query: 596   a 596
             |
Sbjct: 73754 a 73754



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 444    gatgatcccatcattgtggaacagg 468
              |||||||||||||||||||| ||||
Sbjct: 100584 gatgatcccatcattgtggagcagg 100560



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 444   gatgatcccatcattgtggaacagg 468
             |||||||||||||||||||| ||||
Sbjct: 75455 gatgatcccatcattgtggagcagg 75431
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>emb|AL662937.4|OSJN00140 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027G07,
              complete sequence
          Length = 179021

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                          
Query: 536    tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 595
              ||||||||| ||||||| |||||| | ||| || |||||||||||||| || ||||||||
Sbjct: 178717 tgacatgagaatcaagacaggagaacgagaggaagatgatctacaactgattgatggtgc 178658

               
Query: 596    a 596
              |
Sbjct: 178657 a 178657
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                            
Query: 536      tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 595
                ||||||||| ||||||| |||||| | ||| || |||||||||||||| || ||||||||
Sbjct: 22761745 tgacatgagaatcaagacaggagaacgagaggaagatgatctacaactgattgatggtgc 22761686

                 
Query: 596      a 596
                |
Sbjct: 22761685 a 22761685



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                            
Query: 536      tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 595
                ||||||||| ||||||| |||||| | ||| || |||||||||||||| || ||||||||
Sbjct: 22736617 tgacatgagaatcaagacaggagaacgagaggaagatgatctacaactgattgatggtgc 22736558

                 
Query: 596      a 596
                |
Sbjct: 22736557 a 22736557



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                           
Query: 536      tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtg 594
                ||||||||||||||||| |||||| | ||| ||| |||||||||| || || |||||||
Sbjct: 22537886 tgacatgaggatcaagacaggagaacgagatgagaatgatctacagctgattgatggtg 22537828



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 444      gatgatcccatcattgtggaacagg 468
                |||||||||||||||||||| ||||
Sbjct: 22763388 gatgatcccatcattgtggagcagg 22763364



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 444      gatgatcccatcattgtggaacagg 468
                |||||||||||||||||||| ||||
Sbjct: 22738258 gatgatcccatcattgtggagcagg 22738234
to top
>ref|NM_185894.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 549

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 534 tttgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggt 593
           |||||| |||||||||||| ||| || |||||| | ||||| ||||| ||||| ||||||
Sbjct: 49  tttgacgtgaggatcaagacaggcgaacaagaaaaagatgacctacagctaattgatggt 108

              
Query: 594 gca 596
           |||
Sbjct: 109 gca 111
to top
>ref|XM_472683.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1065

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 536 tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtg 594
           ||||||||||||||||| |||||| | ||| ||| |||||||||| || || |||||||
Sbjct: 738 tgacatgaggatcaagacaggagaacgagatgagaatgatctacagctgattgatggtg 796
to top
>emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086B14,
              complete sequence
          Length = 175698

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                         
Query: 536    tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtg 594
              ||||||||||||||||| |||||| | ||| ||| |||||||||| || || |||||||
Sbjct: 141641 tgacatgaggatcaagacaggagaacgagatgagaatgatctacagctgattgatggtg 141583
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                            
Query: 534      tttgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggt 593
                |||||| |||||||||||| ||| || |||||| | ||||| ||||| ||||| ||||||
Sbjct: 26889001 tttgacgtgaggatcaagacaggcgaacaagaaaaagatgacctacagctaattgatggt 26888942

                   
Query: 594      gca 596
                |||
Sbjct: 26888941 gca 26888939



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                            
Query: 536      tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 595
                ||||||||||||||||| ||| || |||||| | ||||| ||||| || || ||||||||
Sbjct: 26942309 tgacatgaggatcaagacaggtgaacaagaaaaagatgacctacagctgattgatggtgc 26942250

                 
Query: 596      a 596
                |
Sbjct: 26942249 a 26942249



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                            
Query: 536      tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 595
                ||||||||||||||||| ||| || |||||| | ||||| ||||| || || ||||||||
Sbjct: 26925661 tgacatgaggatcaagacaggtgaacaagaaaaagatgacctacagctgattgatggtgc 26925602

                 
Query: 596      a 596
                |
Sbjct: 26925601 a 26925601



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 444      gatgatcccatcattgtggaacagg 468
                |||||||||||||||||||| ||||
Sbjct: 26944613 gatgatcccatcattgtggagcagg 26944589



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 444      gatgatcccatcattgtggaacagg 468
                |||||||||||||||||||| ||||
Sbjct: 26927969 gatgatcccatcattgtggagcagg 26927945
to top
>dbj|AP005455.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0503D09
          Length = 144443

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                         
Query: 534   tttgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggt 593
             |||||| |||||||||||| ||| || |||||| | ||||| ||||| ||||| ||||||
Sbjct: 37592 tttgacgtgaggatcaagacaggcgaacaagaaaaagatgacctacagctaattgatggt 37533

                
Query: 594   gca 596
             |||
Sbjct: 37532 gca 37530



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                         
Query: 536   tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 595
             ||||||||||||||||| ||| || |||||| | ||||| ||||| || || ||||||||
Sbjct: 90900 tgacatgaggatcaagacaggtgaacaagaaaaagatgacctacagctgattgatggtgc 90841

              
Query: 596   a 596
             |
Sbjct: 90840 a 90840



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                         
Query: 536   tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 595
             ||||||||||||||||| ||| || |||||| | ||||| ||||| || || ||||||||
Sbjct: 74252 tgacatgaggatcaagacaggtgaacaagaaaaagatgacctacagctgattgatggtgc 74193

              
Query: 596   a 596
             |
Sbjct: 74192 a 74192



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 444   gatgatcccatcattgtggaacagg 468
             |||||||||||||||||||| ||||
Sbjct: 93204 gatgatcccatcattgtggagcagg 93180



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 444   gatgatcccatcattgtggaacagg 468
             |||||||||||||||||||| ||||
Sbjct: 76560 gatgatcccatcattgtggagcagg 76536
to top
>ref|NM_195726.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0093I09.32), mRNA
          Length = 597

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 531 gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctaca 580
           |||| ||| ||||| ||||||| |||||| ||||||||||||||| ||||
Sbjct: 97  gagtatgatatgagaatcaagacaggagaacaagaagaggatgatataca 146
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                
Query: 464    acagggttctcttattgagatgactggccctaag 497
              ||||||||||||||| || |||||||||||||||
Sbjct: 437005 acagggttctcttatcgaaatgactggccctaag 437038



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                
Query: 531    gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctaca 580
              |||||||||||||| ||||| |  || ||| ||||||| |||||||||||
Sbjct: 437072 gagtttgacatgagaatcaaaactggggagaaagaagaagatgatctaca 437121
to top
>gb|AC099774.6| Oryza sativa chromosome 10 BAC OSJNBa0073L20 genomic sequence, complete
             sequence
          Length = 147651

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                               
Query: 531   gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctaca 580
             |||| ||| ||||| ||||||| |||||| ||||||||||||||| ||||
Sbjct: 78269 gagtatgatatgagaatcaagacaggagaacaagaagaggatgatataca 78318
to top
>gb|AC090486.3| Genomic sequence for  Oryza sativa (japonica cultivar-group) cultivar
              Nipponbare  clone OSJNBa0093I09, from Chromosome 10,
              complete sequence
          Length = 172434

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                
Query: 531    gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctaca 580
              |||| ||| ||||| ||||||| |||||| ||||||||||||||| ||||
Sbjct: 168725 gagtatgatatgagaatcaagacaggagaacaagaagaggatgatataca 168774
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                 
Query: 531     gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctaca 580
               |||| ||| ||||| ||||||| |||||| ||||||||||||||| ||||
Sbjct: 8687628 gagtatgatatgagaatcaagacaggagaacaagaagaggatgatataca 8687677
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                
Query: 464    acagggttctcttattgagatgactggccctaag 497
              ||||||||||||||| || |||||||||||||||
Sbjct: 437003 acagggttctcttatcgaaatgactggccctaag 437036



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                
Query: 531    gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctaca 580
              |||||||||||||| ||||| |  || ||| ||||||| |||||||||||
Sbjct: 437070 gagtttgacatgagaatcaaaactggggagaaagaagaagatgatctaca 437119
to top
>dbj|AK121936.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107C02, full
           insert sequence
          Length = 1436

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 531 gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctaca 580
           ||||||||||||||||| || ||||||||| ||||| | ||||| |||||
Sbjct: 791 gagtttgacatgaggataaaaaaaggagagtaagaaaaagatgacctaca 840
to top
>dbj|AK100836.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123E13, full
           insert sequence
          Length = 1514

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 531 gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctaca 580
           |||| ||| ||||| ||||||| |||||| ||||||||||||||| ||||
Sbjct: 866 gagtatgatatgagaatcaagacaggagaacaagaagaggatgatataca 915
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                 
Query: 531     gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctaca 580
               |||| ||| ||||| ||||||| |||||| ||||||||||||||| ||||
Sbjct: 8692767 gagtatgatatgagaatcaagacaggagaacaagaagaggatgatataca 8692816
to top
>gb|AC113930.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1384D03,
             complete sequence
          Length = 116214

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                               
Query: 464   acagggttctcttattgagatgactggccctaag 497
             ||||||||||||||| || |||||||||||||||
Sbjct: 35465 acagggttctcttatcgaaatgactggccctaag 35498



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                               
Query: 531   gagtttgacatgaggatcaagaaaggagagcaagaagaggatgatctaca 580
             |||||||||||||| ||||| |  || ||| ||||||| |||||||||||
Sbjct: 35532 gagtttgacatgagaatcaaaactggggagaaagaagaagatgatctaca 35581
to top
>ref|XM_479331.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1777

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                        
Query: 536  tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 595
            ||||||||||||||||| ||| || |||||| | ||||| ||||| || || ||||||||
Sbjct: 963  tgacatgaggatcaagacaggtgaacaagaaaaagatgacctacagctgattgatggtgc 1022

             
Query: 596  a 596
            |
Sbjct: 1023 a 1023



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 444 gatgatcccatcattgtggaacagggttc 472
           |||||||||||||||||||| ||||||||
Sbjct: 871 gatgatcccatcattgtggagcagggttc 899
to top
>ref|XM_479329.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1814

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 536 tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 595
           ||||||||||||||||| ||| || |||||| | ||||| ||||| || || ||||||||
Sbjct: 936 tgacatgaggatcaagacaggtgaacaagaaaaagatgacctacagctgattgatggtgc 995

            
Query: 596 a 596
           |
Sbjct: 996 a 996



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 444 gatgatcccatcattgtggaacagggttc 472
           |||||||||||||||||||| ||||||||
Sbjct: 844 gatgatcccatcattgtggagcagggttc 872
to top
>dbj|AP003822.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1316_A04
          Length = 87144

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                        
Query: 536  tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 595
            ||||||||||||||||| ||| || |||||| | ||||| ||||| || || ||||||||
Sbjct: 6787 tgacatgaggatcaagacaggtgaacaagaaaaagatgacctacagctgattgatggtgc 6728

             
Query: 596  a 596
            |
Sbjct: 6727 a 6727



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 444  gatgatcccatcattgtggaacagg 468
            |||||||||||||||||||| ||||
Sbjct: 9091 gatgatcccatcattgtggagcagg 9067
to top
>dbj|AK069929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036O09, full
            insert sequence
          Length = 1777

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                        
Query: 536  tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 595
            ||||||||||||||||| ||| || |||||| | ||||| ||||| || || ||||||||
Sbjct: 963  tgacatgaggatcaagacaggtgaacaagaaaaagatgacctacagctgattgatggtgc 1022

             
Query: 596  a 596
            |
Sbjct: 1023 a 1023



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 444 gatgatcccatcattgtggaacagggttc 472
           |||||||||||||||||||| ||||||||
Sbjct: 871 gatgatcccatcattgtggagcagggttc 899
to top
>dbj|AK066044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013048P13, full
           insert sequence
          Length = 1814

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 536 tgacatgaggatcaagaaaggagagcaagaagaggatgatctacaactaatagatggtgc 595
           ||||||||||||||||| ||| || |||||| | ||||| ||||| || || ||||||||
Sbjct: 936 tgacatgaggatcaagacaggtgaacaagaaaaagatgacctacagctgattgatggtgc 995

            
Query: 596 a 596
           |
Sbjct: 996 a 996



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 444 gatgatcccatcattgtggaacagggttc 472
           |||||||||||||||||||| ||||||||
Sbjct: 844 gatgatcccatcattgtggagcagggttc 872
to top
>gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0035B18, complete sequence
          Length = 123425

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 529   tcgagtttgacatgaggatcaagaaaggagag 560
             ||||||||||||||| ||||||||| ||||||
Sbjct: 29067 tcgagtttgacatgaagatcaagaacggagag 29098



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 531   gagtttgacatgaggatcaagaaaggagag 560
             ||||||||||||| ||||||||| ||||||
Sbjct: 26562 gagtttgacatgaagatcaagaatggagag 26591
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                               
Query: 529     tcgagtttgacatgaggatcaagaaaggagag 560
               ||||||||||||||| ||||||||| ||||||
Sbjct: 1410272 tcgagtttgacatgaagatcaagaacggagag 1410303



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 531     gagtttgacatgaggatcaagaaaggagag 560
               ||||||||||||| ||||||||| ||||||
Sbjct: 1407767 gagtttgacatgaagatcaagaatggagag 1407796
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                               
Query: 529     tcgagtttgacatgaggatcaagaaaggagag 560
               ||||||||||||||| ||||||||| ||||||
Sbjct: 1407993 tcgagtttgacatgaagatcaagaacggagag 1408024



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 531     gagtttgacatgaggatcaagaaaggagag 560
               ||||||||||||| ||||||||| ||||||
Sbjct: 1405488 gagtttgacatgaagatcaagaatggagag 1405517
to top
>dbj|AK066342.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013068I02, full
           insert sequence
          Length = 1182

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 531 gagtttgacatgaggatcaagaaaggagag 560
           ||||||||||||| ||||||||| ||||||
Sbjct: 664 gagtttgacatgaagatcaagaatggagag 693
to top
>gb|AC157546.7| Mus musculus chromosome 19, clone RP23-325I11, complete sequence
          Length = 173513

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 209    agctctgctgtttcccttgttccag 233
              |||||||||||||| ||||||||||
Sbjct: 101325 agctctgctgtttctcttgttccag 101301
to top
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 383    acaagaggcactctgttttt 402
              ||||||||||||||||||||
Sbjct: 948018 acaagaggcactctgttttt 948037
to top
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 121     ctgggccgcgtttcacgatc 140
               ||||||||||||||||||||
Sbjct: 1117217 ctgggccgcgtttcacgatc 1117198
to top
>gb|AC124388.4| Mus musculus BAC clone RP24-426O7 from chromosome 13, complete
            sequence
          Length = 149152

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 208  cagctctgctgtttcccttg 227
            ||||||||||||||||||||
Sbjct: 5222 cagctctgctgtttcccttg 5203
to top
>gb|AF490259.2| Chikungunya virus strain Ross, complete genome
          Length = 11791

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 426  ccgacgtgatgagacagaga 445
            ||||||||||||||||||||
Sbjct: 2338 ccgacgtgatgagacagaga 2357
to top
>gb|AY358831.1| Homo sapiens clone DNA142930 MUC13 (UNQ6194) mRNA, complete cds
          Length = 2964

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 550 agaaaggagagcaagaagag 569
           ||||||||||||||||||||
Sbjct: 66  agaaaggagagcaagaagag 47
to top
>gb|AC106914.5| Rattus norvegicus  BAC CH230-12M19 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 235005

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 206    agcagctctgctgtttccct 225
              ||||||||||||||||||||
Sbjct: 166626 agcagctctgctgtttccct 166607
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>gb|DQ443544.1| Chikungunya virus strain LR2006_OPY1, complete genome
          Length = 11763

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 426  ccgacgtgatgagacagaga 445
            ||||||||||||||||||||
Sbjct: 2338 ccgacgtgatgagacagaga 2357
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>ref|NM_033049.2| Homo sapiens mucin 13, cell surface associated (MUC13), mRNA
          Length = 2961

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 550 agaaaggagagcaagaagag 569
           ||||||||||||||||||||
Sbjct: 66  agaaaggagagcaagaagag 47
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>gb|AC010303.7| Homo sapiens chromosome 5 clone CTB-37A13, complete sequence
          Length = 86533

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 169  aggaacattgcagtaaaagg 188
            ||||||||||||||||||||
Sbjct: 8772 aggaacattgcagtaaaagg 8753
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>gb|AC060809.7| Homo sapiens chromosome 15, clone RP11-404B13, complete sequence
          Length = 172123

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 383   acaagaggcactctgttttt 402
             ||||||||||||||||||||
Sbjct: 14867 acaagaggcactctgttttt 14886
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>gb|AC023034.9| Homo sapiens, clone RP11-499F3, complete sequence
          Length = 189732

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 383   acaagaggcactctgttttt 402
             ||||||||||||||||||||
Sbjct: 95175 acaagaggcactctgttttt 95194
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>gb|AC008449.6| Homo sapiens chromosome 5 clone CTC-341A9, complete sequence
          Length = 124405

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 169   aggaacattgcagtaaaagg 188
             ||||||||||||||||||||
Sbjct: 82670 aggaacattgcagtaaaagg 82651
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>gb|AF286113.1|AF286113 Homo sapiens transmembrane mucin MUC13 (MUC13) mRNA, complete cds
          Length = 2887

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 550 agaaaggagagcaagaagag 569
           ||||||||||||||||||||
Sbjct: 69  agaaaggagagcaagaagag 50
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>gb|AF294917.1|AF294917 Aplysia californica ribosomal protein S6 mRNA, complete cds
          Length = 760

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 546 atcaagaaaggagagcaaga 565
           ||||||||||||||||||||
Sbjct: 344 atcaagaaaggagagcaaga 363
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>gb|AC026342.34| Homo sapiens 3 BAC RP11-559L12 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 109490

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 550   agaaaggagagcaagaagag 569
             ||||||||||||||||||||
Sbjct: 47829 agaaaggagagcaagaagag 47810
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>ref|XM_573444.1| PREDICTED: Rattus norvegicus similar to specifically
           androgen-regulated protein (LOC498222), mRNA
          Length = 2588

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 206 agcagctctgctgtttccct 225
           ||||||||||||||||||||
Sbjct: 33  agcagctctgctgtttccct 14
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>gb|AF369024.2| Chikungunya virus strain S27-African prototype, complete genome
          Length = 11826

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 426  ccgacgtgatgagacagaga 445
            ||||||||||||||||||||
Sbjct: 2337 ccgacgtgatgagacagaga 2356
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>emb|X80774.1|SGPREPG Streptomyces ghanaensis plasmid DNA for prg, traR, spdB3, spdB2,
            traB, rep genes and orf106, orf80, orf73, orf193, orf141
          Length = 12208

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 243  ctgcacctccacctacgcca 262
            ||||||||||||||||||||
Sbjct: 8599 ctgcacctccacctacgcca 8618
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>gb|AC147473.3| Mus musculus BAC clone RP24-353P11 from 13, complete sequence
          Length = 158972

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 208   cagctctgctgtttcccttg 227
             ||||||||||||||||||||
Sbjct: 62555 cagctctgctgtttcccttg 62536
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>emb|AL672254.9| Mouse DNA sequence from clone RP23-409H23 on chromosome X, complete
             sequence
          Length = 173251

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 468   ggttctcttattgagatgac 487
             ||||||||||||||||||||
Sbjct: 57890 ggttctcttattgagatgac 57909
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>dbj|AB035807.1| Homo sapiens DRCC1 mRNA for down-regulated in colon cancer 1,
           complete cds
          Length = 2864

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 550 agaaaggagagcaagaagag 569
           ||||||||||||||||||||
Sbjct: 66  agaaaggagagcaagaagag 47
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>dbj|AP004606.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-138O22, complete
             sequences
          Length = 173185

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 232   agtaactatttctgcacctc 251
             ||||||||||||||||||||
Sbjct: 76672 agtaactatttctgcacctc 76691


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,985,409
Number of Sequences: 3902068
Number of extensions: 4985409
Number of successful extensions: 88644
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88220
Number of HSP's gapped (non-prelim): 424
length of query: 679
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 656
effective length of database: 17,143,297,704
effective search space: 11246003293824
effective search space used: 11246003293824
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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