| Clone Name | bags27i05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK119801.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-A08, full insert sequence Length = 537 Score = 317 bits (160), Expect = 2e-83 Identities = 220/240 (91%) Strand = Plus / Plus Query: 178 aggtatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactccaag 237 ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 126 aggtatggtgccagtttgcgtaagcaaatcaagaagatggaggtttctcagcactccaag 185 Query: 238 tacttctgtgaattctgcgggaagtttgctgtgaagaggaaagctgttggaatttgggga 297 ||||||||||| ||||| ||||||||||| |||||||||||||| |||||||| |||||| Sbjct: 186 tacttctgtgagttctgtgggaagtttgccgtgaagaggaaagcagttggaatctgggga 245 Query: 298 tgcaaggactgtgggaaggtcaaggctggtggtgcctataccatgaacacggctagtgcg 357 |||||||||||||||||||| ||||| |||||||| || ||||||||||| ||||||||| Sbjct: 246 tgcaaggactgtgggaaggtgaaggccggtggtgcttacaccatgaacactgctagtgcg 305 Query: 358 gtcaccgtcaggagcaccatccgccgtttgagggagcagaccgaagcttgatcgcactac 417 ||||| ||||||||||| ||||| ||| ||||||||||||| ||||| |||| ||||||| Sbjct: 306 gtcactgtcaggagcacaatccgtcgtctgagggagcagactgaagcctgattgcactac 365 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 49 atgacgaagcgcaccaagaaggctggaatcgtcgggaagtatggta 94 ||||||||||||||||||||||||||||| || || || ||||||| Sbjct: 78 atgacgaagcgcaccaagaaggctggaattgttggcaaatatggta 123
>gb|AY109323.1| Zea mays CL4004_3 mRNA sequence Length = 1730 Score = 317 bits (160), Expect = 2e-83 Identities = 220/240 (91%) Strand = Plus / Plus Query: 172 ggaaccaggtatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcac 231 ||||||||||||||||| || |||||||||| ||||||||||||||||| ||||||||| Sbjct: 1300 ggaaccaggtatggtgctagcttgcgtaagcaaatcaagaagatggaggtatctcagcac 1359 Query: 232 tccaagtacttctgtgaattctgcgggaagtttgctgtgaagaggaaagctgttggaatt 291 |||||||| |||||||| ||||| |||||||||||||||||||||||||| ||||| ||| Sbjct: 1360 tccaagtatttctgtgagttctgtgggaagtttgctgtgaagaggaaagcggttgggatt 1419 Query: 292 tggggatgcaaggactgtgggaaggtcaaggctggtggtgcctataccatgaacacggct 351 |||||||||||||||||||||||||||||||| |||||||| || ||||||||||| ||| Sbjct: 1420 tggggatgcaaggactgtgggaaggtcaaggccggtggtgcttacaccatgaacactgct 1479 Query: 352 agtgcggtcaccgtcaggagcaccatccgccgtttgagggagcagaccgaagcttgatcg 411 ||||||||||| ||||||||||| ||||| || |||||||||||||| ||||| |||||| Sbjct: 1480 agtgcggtcactgtcaggagcacgatccgtcgcttgagggagcagactgaagcatgatcg 1539 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 49 atgacgaagcgcaccaagaaggctggaat 77 ||||||||||| ||||||||||| ||||| Sbjct: 1258 atgacgaagcgaaccaagaaggccggaat 1286
>dbj|AK119702.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-D09, full insert sequence Length = 564 Score = 315 bits (159), Expect = 1e-82 Identities = 219/239 (91%) Strand = Plus / Plus Query: 179 ggtatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactccaagt 238 |||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 127 ggtatggtgccagtttgcgtaagcaaatcaagaagatggaggtttctcagcactccaagt 186 Query: 239 acttctgtgaattctgcgggaagtttgctgtgaagaggaaagctgttggaatttggggat 298 |||||||||| ||||| ||||||||||| |||||||||||||| |||||||| ||||||| Sbjct: 187 acttctgtgagttctgtgggaagtttgccgtgaagaggaaagcagttggaatctggggat 246 Query: 299 gcaaggactgtgggaaggtcaaggctggtggtgcctataccatgaacacggctagtgcgg 358 ||||||||||||||||||| ||||| |||||||| || ||||||||||| |||||||||| Sbjct: 247 gcaaggactgtgggaaggtgaaggccggtggtgcttacaccatgaacactgctagtgcgg 306 Query: 359 tcaccgtcaggagcaccatccgccgtttgagggagcagaccgaagcttgatcgcactac 417 |||| ||||||||||| ||||| ||| ||||||||||||| ||||| |||| ||||||| Sbjct: 307 tcactgtcaggagcacaatccgtcgtctgagggagcagactgaagcctgattgcactac 365 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 49 atgacgaagcgcaccaagaaggctggaatcgtcgggaagtatggta 94 ||||||||||||||||||||||||||||| || || || ||||||| Sbjct: 78 atgacgaagcgcaccaagaaggctggaattgttggcaaatatggta 123
>ref|NM_192041.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 369 Score = 307 bits (155), Expect = 2e-80 Identities = 209/227 (92%) Strand = Plus / Plus Query: 178 aggtatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactccaag 237 ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 139 aggtatggtgccagtttgcgtaagcaaatcaagaagatggaggtttctcagcactccaag 198 Query: 238 tacttctgtgaattctgcgggaagtttgctgtgaagaggaaagctgttggaatttgggga 297 ||||||||||| ||||| ||||||||||| |||||||||||||| |||||||| |||||| Sbjct: 199 tacttctgtgagttctgtgggaagtttgccgtgaagaggaaagcagttggaatctgggga 258 Query: 298 tgcaaggactgtgggaaggtcaaggctggtggtgcctataccatgaacacggctagtgcg 357 |||||||||||||||||||| ||||| |||||||| || ||||||||||| ||||||||| Sbjct: 259 tgcaaggactgtgggaaggtgaaggccggtggtgcttacaccatgaacactgctagtgcg 318 Query: 358 gtcaccgtcaggagcaccatccgccgtttgagggagcagaccgaagc 404 ||||| ||||||||||| ||||| ||| ||||||||||||| ||||| Sbjct: 319 gtcactgtcaggagcacaatccgtcgtctgagggagcagactgaagc 365 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 52 acgaagcgcaccaagaaggctggaatcgtcgggaagtatggta 94 |||||||||||||||||||||||||| || || || ||||||| Sbjct: 94 acgaagcgcaccaagaaggctggaattgttggcaaatatggta 136
>dbj|AK059395.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-A05, full insert sequence Length = 547 Score = 301 bits (152), Expect = 1e-78 Identities = 215/236 (91%) Strand = Plus / Plus Query: 175 accaggtatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactcc 234 |||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||| Sbjct: 127 accaggtatggtgccagtttgcgtaagcagatcaagaagatggaggtttcccagcactcc 186 Query: 235 aagtacttctgtgaattctgcgggaagtttgctgtgaagaggaaagctgttggaatttgg 294 ||||||||||| || ||||| || ||||||||||||||||||||||| |||||||| ||| Sbjct: 187 aagtacttctgcgagttctgtggcaagtttgctgtgaagaggaaagcagttggaatctgg 246 Query: 295 ggatgcaaggactgtgggaaggtcaaggctggtggtgcctataccatgaacacggctagt 354 ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || ||| Sbjct: 247 ggatgcaaggactgtggcaaggtcaaggctggtggtgcctacaccatgaacactgccagt 306 Query: 355 gcggtcaccgtcaggagcaccatccgccgtttgagggagcagaccgaagcttgatc 410 |||||||| ||||| ||||| ||||| || ||||||||||||| ||||| ||||| Sbjct: 307 gcggtcacggtcagaagcacaatccgtcgcctgagggagcagacagaagcctgatc 362 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 49 atgacgaagcgcaccaagaaggctggaatcgtcgggaagtatggta 94 ||||||||||||||||||||||| |||||||| || || ||||||| Sbjct: 82 atgacgaagcgcaccaagaaggcaggaatcgttggcaaatatggta 127
>ref|XM_475898.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 288 Score = 297 bits (150), Expect = 2e-77 Identities = 210/230 (91%) Strand = Plus / Plus Query: 175 accaggtatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactcc 234 |||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||| Sbjct: 55 accaggtatggtgccagtttgcgtaagcagatcaagaagatggaggtttcccagcactcc 114 Query: 235 aagtacttctgtgaattctgcgggaagtttgctgtgaagaggaaagctgttggaatttgg 294 ||||||||||| || ||||| || ||||||||||||||||||||||| |||||||| ||| Sbjct: 115 aagtacttctgcgagttctgtggcaagtttgctgtgaagaggaaagcagttggaatctgg 174 Query: 295 ggatgcaaggactgtgggaaggtcaaggctggtggtgcctataccatgaacacggctagt 354 ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || ||| Sbjct: 175 ggatgcaaggactgtggcaaggtcaaggctggtggtgcctacaccatgaacactgccagt 234 Query: 355 gcggtcaccgtcaggagcaccatccgccgtttgagggagcagaccgaagc 404 |||||||| ||||| ||||| ||||| || ||||||||||||| ||||| Sbjct: 235 gcggtcacggtcagaagcacaatccgtcgcctgagggagcagacagaagc 284 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 51 gacgaagcgcaccaagaaggctggaatcgtcgggaagtatggta 94 ||||||||||||||||||||| |||||||| || || ||||||| Sbjct: 12 gacgaagcgcaccaagaaggcaggaatcgttggcaaatatggta 55
>gb|AY103695.1| Zea mays PCO065803 mRNA sequence Length = 774 Score = 281 bits (142), Expect = 1e-72 Identities = 214/238 (89%) Strand = Plus / Plus Query: 172 ggaaccaggtatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcac 231 |||||||||||||| || || |||||||||| ||||||||||||||||| ||||||||| Sbjct: 147 ggaaccaggtatggcgctagcttgcgtaagcaaatcaagaagatggaggtatctcagcac 206 Query: 232 tccaagtacttctgtgaattctgcgggaagtttgctgtgaagaggaaagctgttggaatt 291 |||||||||||||| || || || |||||||||||||||||||||||||| ||||||||| Sbjct: 207 tccaagtacttctgcgagttttgtgggaagtttgctgtgaagaggaaagcagttggaatt 266 Query: 292 tggggatgcaaggactgtgggaaggtcaaggctggtggtgcctataccatgaacacggct 351 ||||||||||||||||||||||||||||||||||| ||||| || ||||||||||| ||| Sbjct: 267 tggggatgcaaggactgtgggaaggtcaaggctggcggtgcttacaccatgaacactgct 326 Query: 352 agtgcggtcaccgtcaggagcaccatccgccgtttgagggagcagaccgaagcttgat 409 ||||| ||||| ||||||||||| || || || ||||| |||||||| ||||| |||| Sbjct: 327 agtgcagtcactgtcaggagcacgattcgtcgcttgagagagcagactgaagcatgat 384 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 49 atgacgaagcgcaccaagaaggctggaat 77 ||||||||||||||||||||||||||||| Sbjct: 105 atgacgaagcgcaccaagaaggctggaat 133
>gb|AY111949.1| Zea mays CL4004_2 mRNA sequence Length = 536 Score = 244 bits (123), Expect = 3e-61 Identities = 207/235 (88%) Strand = Plus / Plus Query: 175 accaggtatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactcc 234 |||||||||||||||||| | ||||| |||||||||||||||||||| || ||||||||| Sbjct: 119 accaggtatggtgccagtttacgtaaacagatcaagaagatggaggtctcgcagcactcc 178 Query: 235 aagtacttctgtgaattctgcgggaagtttgctgtgaagaggaaagctgttggaatttgg 294 || ||||||||||| ||||| || |||||||| |||||||||||||| ||||| || ||| Sbjct: 179 aaatacttctgtgagttctgtggcaagtttgccgtgaagaggaaagcagttggtatctgg 238 Query: 295 ggatgcaaggactgtgggaaggtcaaggctggtggtgcctataccatgaacacggctagt 354 ||||||||||||||||||||||| ||||| ||||| ||||| || |||||||| |||||| Sbjct: 239 ggatgcaaggactgtgggaaggttaaggccggtggcgcctacacaatgaacactgctagt 298 Query: 355 gcggtcaccgtcaggagcaccatccgccgtttgagggagcagaccgaagcttgat 409 |||||||| || || ||||| ||||| || || |||||||||||||||| |||| Sbjct: 299 gcggtcactgtgagaagcacaatccggcgcctgcgggagcagaccgaagcatgat 353 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 49 atgacgaagcgcaccaagaaggctggaatcgtcgggaagtatggta 94 |||||||| |||||||||||||| |||||||| || || ||||||| Sbjct: 74 atgacgaaacgcaccaagaaggcaggaatcgttggcaaatatggta 119
>dbj|D29723.1|RICYK36 Oryza sativa mRNA, partial homologous to ribosomal protein L37a gene Length = 283 Score = 232 bits (117), Expect = 1e-57 Identities = 160/173 (92%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 175 accaggtatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactcc 234 |||||||||||||||||| |||||||| ||||||||||||||||||| || ||||||||| Sbjct: 110 accaggtatggtgccagtttgcgtaag-agatcaagaagatggaggtttcccagcactcc 168 Query: 235 aagtacttctgtgaattctgcgggaagtttgctgtgaagaggaaagctgttggaatttgg 294 ||||||||||| || ||||| || ||||||||||||||||||||||| |||||||| ||| Sbjct: 169 aagtacttctgcgagttctgtggcaagtttgctgtgaagaggaaagcagttggaatctgg 228 Query: 295 ggatgcaaggactgtgggaaggtcaaggctggtggtgcctataccatgaacac 347 ||||||||||||||||| ||||||||||||||||||||||| | ||||||||| Sbjct: 229 ggatgcaaggactgtggcaaggtcaaggctggtggtgcctacaacatgaacac 281 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 49 atgacgaagcgcaccaagaaggctggaatcgtcgggaagtatggta 94 ||||||||||||||||||||||| |||||||| || || ||||||| Sbjct: 65 atgacgaagcgcaccaagaaggcaggaatcgttggcaaatatggta 110
>gb|DQ083180.1| Oryza sativa (indica cultivar-group) clone 2S8C47 mRNA sequence Length = 308 Score = 228 bits (115), Expect = 2e-56 Identities = 163/179 (91%) Strand = Plus / Plus Query: 239 acttctgtgaattctgcgggaagtttgctgtgaagaggaaagctgttggaatttggggat 298 |||||||||| ||||| ||||||||||| |||||||||||||| |||||||| ||||||| Sbjct: 1 acttctgtgagttctgtgggaagtttgccgtgaagaggaaagcagttggaatctggggat 60 Query: 299 gcaaggactgtgggaaggtcaaggctggtggtgcctataccatgaacacggctagtgcgg 358 ||||||||||||||||||| ||||| |||||||| || ||||||||||| |||||||||| Sbjct: 61 gcaaggactgtgggaaggtgaaggccggtggtgcttacaccatgaacactgctagtgcgg 120 Query: 359 tcaccgtcaggagcaccatccgccgtttgagggagcagaccgaagcttgatcgcactac 417 |||||||||||||||| ||||| ||| ||||||||||||| ||||| |||| ||||||| Sbjct: 121 tcaccgtcaggagcacaatccgtcgtctgagggagcagactgaagcctgattgcactac 179
>dbj|AK059643.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-B10, full insert sequence Length = 370 Score = 206 bits (104), Expect = 6e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 250 ttctgcgggaagtttgctgtgaagaggaaagctgttggaatttggggatgcaaggactgt 309 ||||| ||||||||||| |||||||||||||| |||||||| |||||||||||||||||| Sbjct: 4 ttctgtgggaagtttgccgtgaagaggaaagcagttggaatctggggatgcaaggactgt 63 Query: 310 gggaaggtcaaggctggtggtgcctataccatgaacacggctagtgcggtcaccgtcagg 369 |||||||| ||||| |||||||| || ||||||||||| |||||||||||||| |||||| Sbjct: 64 gggaaggtgaaggccggtggtgcttacaccatgaacactgctagtgcggtcactgtcagg 123 Query: 370 agcaccatccgccgtttgagggagcagaccgaagcttgatcgcactac 417 ||||| ||||| ||| ||||||||||||| ||||| |||| ||||||| Sbjct: 124 agcacaatccgtcgtctgagggagcagactgaagcctgattgcactac 171
>emb|Z24739.1|BRRBPL37A B.rapa ribosomal protein L37a mRNA, complete CDS Length = 461 Score = 139 bits (70), Expect = 1e-29 Identities = 145/170 (85%) Strand = Plus / Plus Query: 199 aagcagatcaagaagatggaggtgtctcagcactccaagtacttctgtgaattctgcggg 258 |||||||| |||||||||||||| |||||| ||||||||||||||| |||||||| Sbjct: 103 aagcagattaagaagatggaggtcagccagcacagcaagtacttctgtgagttctgcggc 162 Query: 259 aagtttgctgtgaagaggaaagctgttggaatttggggatgcaaggactgtgggaaggtc 318 |||| | |||||||| || || ||||| || |||||||||||||| ||||| |||||| Sbjct: 163 aagtacggagtgaagagaaaggcagttggtatctggggatgcaaggattgtggcaaggtc 222 Query: 319 aaggctggtggtgcctataccatgaacacggctagtgcggtcaccgtcag 368 |||||||||||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 223 aaggctggtggtgcatacaccatgaacaccgccagtgccgtcaccgtcag 272
>gb|L21897.1|BRRRPL37A Brassica rapa ribosomal protein L37A (RPL37A) mRNA, complete cds Length = 446 Score = 139 bits (70), Expect = 1e-29 Identities = 145/170 (85%) Strand = Plus / Plus Query: 199 aagcagatcaagaagatggaggtgtctcagcactccaagtacttctgtgaattctgcggg 258 |||||||| |||||||||||||| |||||| ||||||||||||||| |||||||| Sbjct: 103 aagcagattaagaagatggaggtcagccagcacagcaagtacttctgtgagttctgcggc 162 Query: 259 aagtttgctgtgaagaggaaagctgttggaatttggggatgcaaggactgtgggaaggtc 318 |||| | |||||||| || || ||||| || |||||||||||||| ||||| |||||| Sbjct: 163 aagtacggagtgaagagaaaggcagttggtatctggggatgcaaggattgtggcaaggtc 222 Query: 319 aaggctggtggtgcctataccatgaacacggctagtgcggtcaccgtcag 368 |||||||||||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 223 aaggctggtggtgcatacaccatgaacaccgccagtgccgtcaccgtcag 272
>gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1214_E03, complete sequence Length = 144601 Score = 137 bits (69), Expect = 5e-29 Identities = 81/85 (95%) Strand = Plus / Plus Query: 260 agtttgctgtgaagaggaaagctgttggaatttggggatgcaaggactgtgggaaggtca 319 |||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||| Sbjct: 77193 agtttgctgtgaagaggaaagcagttggaatctggggatgcaaggactgtggcaaggtca 77252 Query: 320 aggctggtggtgcctataccatgaa 344 |||||||||||||||| |||||||| Sbjct: 77253 aggctggtggtgcctacaccatgaa 77277 Score = 119 bits (60), Expect = 1e-23 Identities = 75/80 (93%) Strand = Plus / Plus Query: 175 accaggtatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactcc 234 |||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||| Sbjct: 76609 accaggtatggtgccagtttgcgtaagcagatcaagaagatggaggtttcccagcactcc 76668 Query: 235 aagtacttctgtgaattctg 254 ||||||||||| || ||||| Sbjct: 76669 aagtacttctgcgagttctg 76688 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 51 gacgaagcgcaccaagaaggctggaatcgtcgggaagtatggta 94 ||||||||||||||||||||| |||||||| || || ||||||| Sbjct: 76468 gacgaagcgcaccaagaaggcaggaatcgttggcaaatatggta 76511 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 352 agtgcggtcaccgtcaggagcaccatccgccgtttgagggagcagaccgaagcttgatc 410 ||||||||||| ||||| ||||| ||||| || ||||||||||||| ||||| ||||| Sbjct: 77356 agtgcggtcacggtcagaagcacaatccgtcgcctgagggagcagacagaagcctgatc 77414
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 137 bits (69), Expect = 5e-29 Identities = 81/85 (95%) Strand = Plus / Plus Query: 260 agtttgctgtgaagaggaaagctgttggaatttggggatgcaaggactgtgggaaggtca 319 |||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||| Sbjct: 27481063 agtttgctgtgaagaggaaagcagttggaatctggggatgcaaggactgtggcaaggtca 27481122 Query: 320 aggctggtggtgcctataccatgaa 344 |||||||||||||||| |||||||| Sbjct: 27481123 aggctggtggtgcctacaccatgaa 27481147 Score = 119 bits (60), Expect = 1e-23 Identities = 75/80 (93%) Strand = Plus / Plus Query: 175 accaggtatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactcc 234 |||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||| Sbjct: 27480479 accaggtatggtgccagtttgcgtaagcagatcaagaagatggaggtttcccagcactcc 27480538 Query: 235 aagtacttctgtgaattctg 254 ||||||||||| || ||||| Sbjct: 27480539 aagtacttctgcgagttctg 27480558 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 51 gacgaagcgcaccaagaaggctggaatcgtcgggaagtatggta 94 ||||||||||||||||||||| |||||||| || || ||||||| Sbjct: 27480338 gacgaagcgcaccaagaaggcaggaatcgttggcaaatatggta 27480381 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 352 agtgcggtcaccgtcaggagcaccatccgccgtttgagggagcagaccgaagcttgatc 410 ||||||||||| ||||| ||||| ||||| || ||||||||||||| ||||| ||||| Sbjct: 27481226 agtgcggtcacggtcagaagcacaatccgtcgcctgagggagcagacagaagcctgatc 27481284
>gb|AC004667.3| Arabidopsis thaliana chromosome 2 clone T4C15 map ve016, complete sequence Length = 91863 Score = 135 bits (68), Expect = 2e-28 Identities = 170/204 (83%) Strand = Plus / Plus Query: 175 accaggtatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactcc 234 ||||| |||||||||||||| | ||||| |||||||||||||| ||| ||||||| | Sbjct: 39456 accagatatggtgccagtcttaggaagcaaatcaagaagatggaagtgagtcagcacagc 39515 Query: 235 aagtacttctgtgaattctgcgggaagtttgctgtgaagaggaaagctgttggaatttgg 294 || |||||||| | ||||| || |||| |||||| || |||| ||||||||||||||| Sbjct: 39516 aaatacttctgctagttctgtggcaagtatgctgttaaacggaaggctgttggaatttgg 39575 Query: 295 ggatgcaaggactgtgggaaggtcaaggctggtggtgcctataccatgaacacggctagt 354 ||||| |||||||||||||| || |||||||| |||||||| || ||||| || |||||| Sbjct: 39576 ggatgtaaggactgtgggaaagttaaggctggaggtgcctacacgatgaatactgctagt 39635 Query: 355 gcggtcaccgtcaggagcaccatc 378 || || || || ||||| |||||| Sbjct: 39636 gctgtaactgttaggagtaccatc 39659
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 135 bits (68), Expect = 2e-28 Identities = 92/100 (92%) Strand = Plus / Minus Query: 162 caatgttataggaaccaggtatggtgccagtctgcgtaagcagatcaagaagatggaggt 221 |||| ||||||| || ||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 27960319 caatattataggtactaggtatggtgccagtttgcgtaagcaaatcaagaagatggaggt 27960260 Query: 222 gtctcagcactccaagtacttctgtgaattctgcgggaag 261 |||||||||||||||||||||||||| ||||| |||||| Sbjct: 27960259 ttctcagcactccaagtacttctgtgagttctgtgggaag 27960220 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Minus Query: 260 agtttgctgtgaagaggaaagctgttggaatttggggatgcaaggactgtgggaaggtca 319 ||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||| | Sbjct: 27959426 agtttgccgtgaagaggaaagcagttggaatctggggatgcaaggactgtgggaaggtga 27959367 Query: 320 aggctggtggtgcctataccatgaa 344 |||| |||||||| || |||||||| Sbjct: 27959366 aggccggtggtgcttacaccatgaa 27959342 Score = 81.8 bits (41), Expect = 3e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 349 gctagtgcggtcaccgtcaggagcaccatccgccgtttgagggagcagaccgaagcttga 408 |||||||||||||| ||||||||||| ||||| ||| ||||||||||||| ||||| ||| Sbjct: 27959247 gctagtgcggtcactgtcaggagcacaatccgtcgtctgagggagcagactgaagcctga 27959188 Query: 409 tcgcactac 417 | ||||||| Sbjct: 27959187 ttgcactac 27959179 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 51 gacgaagcgcaccaagaaggctggaatcgtcgggaagtatggtatg 96 ||||||||||||||||||||||||||| || || || ||||||||| Sbjct: 27960428 gacgaagcgcaccaagaaggctggaattgttggcaaatatggtatg 27960383
>dbj|AP003335.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144G04 Length = 194459 Score = 135 bits (68), Expect = 2e-28 Identities = 92/100 (92%) Strand = Plus / Minus Query: 162 caatgttataggaaccaggtatggtgccagtctgcgtaagcagatcaagaagatggaggt 221 |||| ||||||| || ||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 147000 caatattataggtactaggtatggtgccagtttgcgtaagcaaatcaagaagatggaggt 146941 Query: 222 gtctcagcactccaagtacttctgtgaattctgcgggaag 261 |||||||||||||||||||||||||| ||||| |||||| Sbjct: 146940 ttctcagcactccaagtacttctgtgagttctgtgggaag 146901 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Minus Query: 260 agtttgctgtgaagaggaaagctgttggaatttggggatgcaaggactgtgggaaggtca 319 ||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||| | Sbjct: 146107 agtttgccgtgaagaggaaagcagttggaatctggggatgcaaggactgtgggaaggtga 146048 Query: 320 aggctggtggtgcctataccatgaa 344 |||| |||||||| || |||||||| Sbjct: 146047 aggccggtggtgcttacaccatgaa 146023 Score = 81.8 bits (41), Expect = 3e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 349 gctagtgcggtcaccgtcaggagcaccatccgccgtttgagggagcagaccgaagcttga 408 |||||||||||||| ||||||||||| ||||| ||| ||||||||||||| ||||| ||| Sbjct: 145928 gctagtgcggtcactgtcaggagcacaatccgtcgtctgagggagcagactgaagcctga 145869 Query: 409 tcgcactac 417 | ||||||| Sbjct: 145868 ttgcactac 145860 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 51 gacgaagcgcaccaagaaggctggaatcgtcgggaagtatggtatg 96 ||||||||||||||||||||||||||| || || || ||||||||| Sbjct: 147109 gacgaagcgcaccaagaaggctggaattgttggcaaatatggtatg 147064
>emb|AJ131732.1|PME131732 Pseudotsuga menziesii mRNA for ribosomal protein L37A Length = 607 Score = 127 bits (64), Expect = 5e-26 Identities = 139/164 (84%) Strand = Plus / Plus Query: 175 accaggtatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactcc 234 |||||||||||||||||| | | || ||||| || || ||||| ||| |||||| ||| Sbjct: 212 accaggtatggtgccagtttaagaaaacagattaaaaaaatggaagtgagtcagcattcc 271 Query: 235 aagtacttctgtgaattctgcgggaagtttgctgtgaagaggaaagctgttggaatttgg 294 |||| || ||||||||||| || |||||||| ||||| || ||||| ||||| |||||| Sbjct: 272 aagtttttttgtgaattctgtggcaagtttgcagtgaaaagaaaagcagttgggatttgg 331 Query: 295 ggatgcaaggactgtgggaaggtcaaggctggtggtgcctatac 338 ||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct: 332 ggatgcaaggattgtgggaaggtgaaggcaggtggtgcctatac 375
>ref|NM_111932.1| Arabidopsis thaliana structural constituent of ribosome AT3G10950 mRNA, complete cds Length = 279 Score = 121 bits (61), Expect = 3e-24 Identities = 181/221 (81%) Strand = Plus / Plus Query: 181 tatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactccaagtac 240 |||||||||||||| | |||||||||||||||||||| ||| ||| ||| ||||||| Sbjct: 52 tatggtgccagtcttaggaagcagatcaagaagatggaagtgagtcaacacaacaagtac 111 Query: 241 ttctgtgaattctgcgggaagtttgctgtgaagaggaaagctgttggaatttggggatgc 300 |||||||| |||||||| |||| | || |||||||||| |||||| |||||||| ||| Sbjct: 112 ttctgtgagttctgcggaaagtactccgttaagaggaaagttgttggcatttgggggtgc 171 Query: 301 aaggactgtgggaaggtcaaggctggtggtgcctataccatgaacacggctagtgcggtc 360 || || || ||||| || || || || ||||| || || ||||||||||||||||| || Sbjct: 172 aaagattgcgggaaagtgaaagcaggcggtgcatacacaatgaacacggctagtgctgtg 231 Query: 361 accgtcaggagcaccatccgccgtttgagggagcagaccga 401 || || ||||| |||||| | || ||||| ||||| ||||| Sbjct: 232 actgttaggagtaccatcaggcggttgagagagcaaaccga 272
>gb|AY491666.1| Capsicum annuum unknown mRNA Length = 504 Score = 111 bits (56), Expect = 3e-21 Identities = 164/200 (82%) Strand = Plus / Plus Query: 181 tatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactccaagtac 240 |||||||||||||||||||||||||| || || |||||||| ||||| ||||||| Sbjct: 78 tatggtgccagtctgcgtaagcagattaaaaaaatggaggtcagccagcatagcaagtac 137 Query: 241 ttctgtgaattctgcgggaagtttgctgtgaagaggaaagctgttggaatttggggatgc 300 ||||| || || || || |||| ||| || |||||||||||||| ||||||||||| ||| Sbjct: 138 ttctgcgagttttgtggaaagtatgcagtaaagaggaaagctgtaggaatttggggttgc 197 Query: 301 aaggactgtgggaaggtcaaggctggtggtgcctataccatgaacacggctagtgcggtc 360 || || ||||| |||||||| || |||||||| || || ||||||| || ||||| || Sbjct: 198 aaagattgtggcaaggtcaaagccggtggtgcttacacattgaacactgcaagtgctgtt 257 Query: 361 accgtcaggagcaccatccg 380 || || ||||| |||||||| Sbjct: 258 acagttaggagtaccatccg 277 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 61 accaagaaggctggaatcgtcgggaagtatggta 94 |||||||||||||||||||| ||||||||||||| Sbjct: 39 accaagaaggctggaatcgttgggaagtatggta 72
>ref|NM_115888.2| Arabidopsis thaliana structural constituent of ribosome AT3G60245 mRNA, complete cds Length = 592 Score = 109 bits (55), Expect = 1e-20 Identities = 163/199 (81%) Strand = Plus / Plus Query: 199 aagcagatcaagaagatggaggtgtctcagcactccaagtacttctgtgaattctgcggg 258 |||||||| |||||||||||||| |||||| ||||||||||||||| ||||| || Sbjct: 127 aagcagattaagaagatggaggtcagccagcacagcaagtacttctgtgagttctgtggc 186 Query: 259 aagtttgctgtgaagaggaaagctgttggaatttggggatgcaaggactgtgggaaggtc 318 |||| | |||||| | || |||||||| || ||||| |||||||| ||||| |||||| Sbjct: 187 aagtacggagtgaagcgaaaggctgttggtatctggggttgcaaggattgtggcaaggtc 246 Query: 319 aaggctggtggtgcctataccatgaacacggctagtgcggtcaccgtcaggagcaccatc 378 ||||| |||||||| || || |||||||| || ||||||||||| || || ||||| ||| Sbjct: 247 aaggcaggtggtgcttacacaatgaacaccgccagtgcggtcactgttagaagcacgatc 306 Query: 379 cgccgtttgagggagcaga 397 | | ||||||||||||| Sbjct: 307 agaaggttgagggagcaga 325
>gb|AY117196.1| Arabidopsis thaliana unknown protein (At3g60245) mRNA, complete cds Length = 310 Score = 109 bits (55), Expect = 1e-20 Identities = 163/199 (81%) Strand = Plus / Plus Query: 199 aagcagatcaagaagatggaggtgtctcagcactccaagtacttctgtgaattctgcggg 258 |||||||| |||||||||||||| |||||| ||||||||||||||| ||||| || Sbjct: 70 aagcagattaagaagatggaggtcagccagcacagcaagtacttctgtgagttctgtggc 129 Query: 259 aagtttgctgtgaagaggaaagctgttggaatttggggatgcaaggactgtgggaaggtc 318 |||| | |||||| | || |||||||| || ||||| |||||||| ||||| |||||| Sbjct: 130 aagtacggagtgaagcgaaaggctgttggtatctggggttgcaaggattgtggcaaggtc 189 Query: 319 aaggctggtggtgcctataccatgaacacggctagtgcggtcaccgtcaggagcaccatc 378 ||||| |||||||| || || |||||||| || ||||||||||| || || ||||| ||| Sbjct: 190 aaggcaggtggtgcttacacaatgaacaccgccagtgcggtcactgttagaagcacgatc 249 Query: 379 cgccgtttgagggagcaga 397 | | ||||||||||||| Sbjct: 250 agaaggttgagggagcaga 268
>gb|AY080669.1| Arabidopsis thaliana unknown protein (At3g60245) mRNA, complete cds Length = 462 Score = 109 bits (55), Expect = 1e-20 Identities = 163/199 (81%) Strand = Plus / Plus Query: 199 aagcagatcaagaagatggaggtgtctcagcactccaagtacttctgtgaattctgcggg 258 |||||||| |||||||||||||| |||||| ||||||||||||||| ||||| || Sbjct: 119 aagcagattaagaagatggaggtcagccagcacagcaagtacttctgtgagttctgtggc 178 Query: 259 aagtttgctgtgaagaggaaagctgttggaatttggggatgcaaggactgtgggaaggtc 318 |||| | |||||| | || |||||||| || ||||| |||||||| ||||| |||||| Sbjct: 179 aagtacggagtgaagcgaaaggctgttggtatctggggttgcaaggattgtggcaaggtc 238 Query: 319 aaggctggtggtgcctataccatgaacacggctagtgcggtcaccgtcaggagcaccatc 378 ||||| |||||||| || || |||||||| || ||||||||||| || || ||||| ||| Sbjct: 239 aaggcaggtggtgcttacacaatgaacaccgccagtgcggtcactgttagaagcacgatc 298 Query: 379 cgccgtttgagggagcaga 397 | | ||||||||||||| Sbjct: 299 agaaggttgagggagcaga 317
>emb|BX825839.1|CNS0A7IO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL66ZG08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 451 Score = 109 bits (55), Expect = 1e-20 Identities = 163/199 (81%) Strand = Plus / Plus Query: 199 aagcagatcaagaagatggaggtgtctcagcactccaagtacttctgtgaattctgcggg 258 |||||||| |||||||||||||| |||||| ||||||||||||||| ||||| || Sbjct: 115 aagcagattaagaagatggaggtcagccagcacagcaagtacttctgtgagttctgtggc 174 Query: 259 aagtttgctgtgaagaggaaagctgttggaatttggggatgcaaggactgtgggaaggtc 318 |||| | |||||| | || |||||||| || ||||| |||||||| ||||| |||||| Sbjct: 175 aagtacggagtgaagcgaaaggctgttggtatctggggttgcaaggattgtggcaaggtc 234 Query: 319 aaggctggtggtgcctataccatgaacacggctagtgcggtcaccgtcaggagcaccatc 378 ||||| |||||||| || || |||||||| || ||||||||||| || || ||||| ||| Sbjct: 235 aaggcaggtggtgcttacacaatgaacaccgccagtgcggtcactgttagaagcacgatc 294 Query: 379 cgccgtttgagggagcaga 397 | | ||||||||||||| Sbjct: 295 agaaggttgagggagcaga 313
>emb|BX825643.1|CNS0A7I6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL52ZF12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 472 Score = 109 bits (55), Expect = 1e-20 Identities = 163/199 (81%) Strand = Plus / Plus Query: 199 aagcagatcaagaagatggaggtgtctcagcactccaagtacttctgtgaattctgcggg 258 |||||||| |||||||||||||| |||||| ||||||||||||||| ||||| || Sbjct: 110 aagcagattaagaagatggaggtcagccagcacagcaagtacttctgtgagttctgtggc 169 Query: 259 aagtttgctgtgaagaggaaagctgttggaatttggggatgcaaggactgtgggaaggtc 318 |||| | |||||| | || |||||||| || ||||| |||||||| ||||| |||||| Sbjct: 170 aagtacggagtgaagcgaaaggctgttggtatctggggttgcaaggattgtggcaaggtc 229 Query: 319 aaggctggtggtgcctataccatgaacacggctagtgcggtcaccgtcaggagcaccatc 378 ||||| |||||||| || || |||||||| || ||||||||||| || || ||||| ||| Sbjct: 230 aaggcaggtggtgcttacacaatgaacaccgccagtgcggtcactgttagaagcacgatc 289 Query: 379 cgccgtttgagggagcaga 397 | | ||||||||||||| Sbjct: 290 agaaggttgagggagcaga 308
>gb|AY088178.1| Arabidopsis thaliana clone 42545 mRNA, complete sequence Length = 466 Score = 109 bits (55), Expect = 1e-20 Identities = 163/199 (81%) Strand = Plus / Plus Query: 199 aagcagatcaagaagatggaggtgtctcagcactccaagtacttctgtgaattctgcggg 258 |||||||| |||||||||||||| |||||| ||||||||||||||| ||||| || Sbjct: 127 aagcagattaagaagatggaggtcagccagcacagcaagtacttctgtgagttctgtggc 186 Query: 259 aagtttgctgtgaagaggaaagctgttggaatttggggatgcaaggactgtgggaaggtc 318 |||| | |||||| | || |||||||| || ||||| |||||||| ||||| |||||| Sbjct: 187 aagtacggagtgaagcgaaaggctgttggtatctggggttgcaaggattgtggcaaggtc 246 Query: 319 aaggctggtggtgcctataccatgaacacggctagtgcggtcaccgtcaggagcaccatc 378 ||||| |||||||| || || |||||||| || ||||||||||| || || ||||| ||| Sbjct: 247 aaggcaggtggtgcttacacaatgaacaccgccagtgcggtcactgttagaagcacgatc 306 Query: 379 cgccgtttgagggagcaga 397 | | ||||||||||||| Sbjct: 307 agaaggttgagggagcaga 325
>emb|AJ879068.1| Capsicum chinense mRNA for 60S ribosomal protein L37a Length = 536 Score = 103 bits (52), Expect = 7e-19 Identities = 163/200 (81%) Strand = Plus / Plus Query: 181 tatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactccaagtac 240 |||||||||||||||||||||||||| || || |||||||| ||||| | ||||| Sbjct: 106 tatggtgccagtctgcgtaagcagattaaaaaaatggaggtcagccagcatagcgagtac 165 Query: 241 ttctgtgaattctgcgggaagtttgctgtgaagaggaaagctgttggaatttggggatgc 300 ||||| || || || || |||| ||| || |||||||||||||| ||||||||||| ||| Sbjct: 166 ttctgcgagttttgtggaaagtatgcagtaaagaggaaagctgtaggaatttggggttgc 225 Query: 301 aaggactgtgggaaggtcaaggctggtggtgcctataccatgaacacggctagtgcggtc 360 || || ||||| |||||||| || |||||||| || || ||||||| || ||||| || Sbjct: 226 aaagattgtggcaaggtcaaagccggtggtgcttacacattgaacactgcaagtgctgtt 285 Query: 361 accgtcaggagcaccatccg 380 || || ||||| |||||||| Sbjct: 286 acagttaggagtaccatccg 305 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 61 accaagaaggctggaatcgtcgggaagtatggta 94 |||||||||||||||||||| ||||||||||||| Sbjct: 67 accaagaaggctggaatcgttgggaagtatggta 100
>emb|BX822513.1|CNS0A7MD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB44ZB04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 437 Score = 93.7 bits (47), Expect = 7e-16 Identities = 161/199 (80%) Strand = Plus / Plus Query: 199 aagcagatcaagaagatggaggtgtctcagcactccaagtacttctgtgaattctgcggg 258 |||||||| |||||||||||||| |||||| |||| |||||||||| ||||| || Sbjct: 110 aagcagattaagaagatggaggtcagccagcacagcaagaacttctgtgagttctgtggc 169 Query: 259 aagtttgctgtgaagaggaaagctgttggaatttggggatgcaaggactgtgggaaggtc 318 |||| | |||||| | || ||||| || || ||||| |||||||| ||||| |||||| Sbjct: 170 aagtacggagtgaagcgaaaggctgtaggtatctggggttgcaaggattgtggcaaggtc 229 Query: 319 aaggctggtggtgcctataccatgaacacggctagtgcggtcaccgtcaggagcaccatc 378 ||||| |||||||| || || |||||||| || ||||||||||| || || ||||| ||| Sbjct: 230 aaggcaggtggtgcttacacaatgaacaccgccagtgcggtcactgtaagaagcacgatc 289 Query: 379 cgccgtttgagggagcaga 397 | | ||||||||||||| Sbjct: 290 agaaggttgagggagcaga 308
>gb|AF127042.1|AF127042 Gossypium hirsutum 60S ribosomal protein L37a (RL37a) mRNA, complete cds Length = 619 Score = 93.7 bits (47), Expect = 7e-16 Identities = 137/167 (82%) Strand = Plus / Plus Query: 181 tatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactccaagtac 240 |||||||||||| || | ||||| || ||||||||||||||| ||| ||| ||||||| Sbjct: 86 tatggtgccagtttgaggaagcaaattaagaagatggaggtgagtcaacacagcaagtac 145 Query: 241 ttctgtgaattctgcgggaagtttgctgtgaagaggaaagctgttggaatttggggatgc 300 ||||| || ||||| || |||| ||| |||||||| || ||||| ||||| ||||| ||| Sbjct: 146 ttctgcgagttctgtggaaagtatgcagtgaagagaaaggctgtaggaatctggggctgc 205 Query: 301 aaggactgtgggaaggtcaaggctggtggtgcctataccatgaacac 347 |||| || ||||| || || ||||||||||| ||||| ||||||| Sbjct: 206 aaggcttgcgggaaagttaaagctggtggtgcttatactttgaacac 252
>gb|AC009991.5|ATAC009991 Arabidopsis thaliana chromosome III BAC F9F8 genomic sequence, complete sequence Length = 101284 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 181 tatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactccaagtac 240 |||||||||||||| | |||||||||||||||||||| ||| ||| ||| ||||||| Sbjct: 91891 tatggtgccagtcttaggaagcagatcaagaagatggaagtgagtcaacacaacaagtac 91832 Query: 241 ttctgtgaattctgcgg 257 |||||||| |||||||| Sbjct: 91831 ttctgtgagttctgcgg 91815 Score = 69.9 bits (35), Expect = 1e-08 Identities = 107/131 (81%) Strand = Plus / Minus Query: 271 aagaggaaagctgttggaatttggggatgcaaggactgtgggaaggtcaaggctggtggt 330 |||||||||| |||||| |||||||| ||||| || || ||||| || || || || ||| Sbjct: 91686 aagaggaaagttgttggcatttgggggtgcaaagattgcgggaaagtgaaagcaggcggt 91627 Query: 331 gcctataccatgaacacggctagtgcggtcaccgtcaggagcaccatccgccgtttgagg 390 || || || ||||||||||||||||| || || || ||||| |||||| | || ||||| Sbjct: 91626 gcatacacaatgaacacggctagtgctgtgactgttaggagtaccatcaggcggttgaga 91567 Query: 391 gagcagaccga 401 ||||| ||||| Sbjct: 91566 gagcaaaccga 91556
>gb|AF363029.3|AF363029 Branchiostoma belcheri 60S ribosomal protein L37A mRNA, complete cds Length = 447 Score = 73.8 bits (37), Expect = 6e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 192 tctgcgtaagcagatcaagaagatggaggtgtctcagcactccaagtac 240 |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 74 tctgcgtaagaccatcaagaagatggaggtgtctcagcactccaagtac 122
>emb|BX826117.1|CNS0A7I3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL85ZD12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 435 Score = 73.8 bits (37), Expect = 6e-10 Identities = 130/161 (80%) Strand = Plus / Plus Query: 199 aagcagatcaagaagatggaggtgtctcagcactccaagtacttctgtgaattctgcggg 258 |||||||| |||||||||||||| |||||| ||||||||||||| | ||||| || Sbjct: 118 aagcagattaagaagatggaggtcagccagcacagcaagtacttctgttagttctgtggc 177 Query: 259 aagtttgctgtgaagaggaaagctgttggaatttggggatgcaaggactgtgggaaggtc 318 |||| | || ||| | || |||||||| || ||||| |||||||| ||||| |||||| Sbjct: 178 aagtacggagtaaagcgaaaggctgttggtatctggggttgcaaggattgtggcaaggtc 237 Query: 319 aaggctggtggtgcctataccatgaacacggctagtgcggt 359 ||||| || ||||| || || |||||||| || |||||||| Sbjct: 238 aaggcagggggtgcttacacaatgaacaccgccagtgcggt 278
>gb|AY168770.1| Branchiostoma belcheri tsingtaunese ribosomal protein L37A mRNA, complete cds Length = 477 Score = 73.8 bits (37), Expect = 6e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 192 tctgcgtaagcagatcaagaagatggaggtgtctcagcactccaagtac 240 |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 87 tctgcgtaagaccatcaagaagatggaggtgtctcagcactccaagtac 135
>dbj|AK062044.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-A08, full insert sequence Length = 1791 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 49 atgacgaagcgcaccaagaaggctggaatcgtcgggaagtatggta 94 ||||||||||||||||||||||| |||||||| || || ||||||| Sbjct: 85 atgacgaagcgcaccaagaaggcaggaatcgttggcaaatatggta 130 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 175 accaggtatggtgccagtctgcgtaagcag 204 |||||||||||||||||| ||||||||||| Sbjct: 130 accaggtatggtgccagtttgcgtaagcag 159
>emb|AL163852.1|ATF27H5 Arabidopsis thaliana DNA chromosome 3, BAC clone F27H5 Length = 88548 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 280 gctgttggaatttggggatgcaaggactgtgggaaggtcaaggctggtggtgc 332 |||||||| || ||||| |||||||| ||||| ||||||||||| |||||||| Sbjct: 44526 gctgttggtatctggggttgcaaggattgtggcaaggtcaaggcaggtggtgc 44578 Score = 48.1 bits (24), Expect = 0.035 Identities = 48/56 (85%) Strand = Plus / Plus Query: 199 aagcagatcaagaagatggaggtgtctcagcactccaagtacttctgtgaattctg 254 |||||||| |||||||||||||| |||||| ||||||||||||||| ||||| Sbjct: 44347 aagcagattaagaagatggaggtcagccagcacagcaagtacttctgtgagttctg 44402
>gb|AF263518.1|AF263518 Arabidopsis thaliana protein synthesis initiation factor 4G (EIF4G) gene, complete cds Length = 10989 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 280 gctgttggaatttggggatgcaaggactgtgggaaggtcaaggctggtggtgc 332 |||||||| || ||||| |||||||| ||||| ||||||||||| |||||||| Sbjct: 7415 gctgttggtatctggggttgcaaggattgtggcaaggtcaaggcaggtggtgc 7467 Score = 48.1 bits (24), Expect = 0.035 Identities = 48/56 (85%) Strand = Plus / Plus Query: 199 aagcagatcaagaagatggaggtgtctcagcactccaagtacttctgtgaattctg 254 |||||||| |||||||||||||| |||||| ||||||||||||||| ||||| Sbjct: 7236 aagcagattaagaagatggaggtcagccagcacagcaagtacttctgtgagttctg 7291
>gb|AY310764.1| Nicotiana benthamiana clone 6-280 unknown mRNA Length = 402 Score = 56.0 bits (28), Expect = 1e-04 Identities = 157/200 (78%) Strand = Plus / Plus Query: 181 tatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactccaagtac 240 |||||||||||| |||| |||||||| ||||| |||||||| ||||| |||||| Sbjct: 51 tatggtgccagtttgcgaaagcagattaagaaaatggaggttagccagcatagcaagtat 110 Query: 241 ttctgtgaattctgcgggaagtttgctgtgaagaggaaagctgttggaatttggggatgc 300 || ||||| || || || |||| || |||||||| ||||| || || |||||||| ||| Sbjct: 111 ttttgtgagttttgtggaaagtacgcagtgaagagaaaagcagtggggatttggggctgc 170 Query: 301 aaggactgtgggaaggtcaaggctggtggtgcctataccatgaacacggctagtgcggtc 360 || || || || || ||||| || || ||||| ||||| ||||||| || ||||| || Sbjct: 171 aaagattgcggcaaagtcaaagcaggcggtgcttatacattgaacactgcaagtgctgtg 230 Query: 361 accgtcaggagcaccatccg 380 || || |||||||| ||||| Sbjct: 231 acagttaggagcacaatccg 250 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Plus Query: 61 accaagaaggctggaatcgtcgggaagtatggta 94 ||||||||||||||||| || ||||| ||||||| Sbjct: 12 accaagaaggctggaatagttgggaaatatggta 45
>gb|AY310766.1| Nicotiana benthamiana clone 7-083 unknown mRNA Length = 195 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 181 tatggtgccagtctgcgtaagcagatcaagaagatggaggt 221 |||||||||||| |||| |||||||| ||||| |||||||| Sbjct: 78 tatggtgccagtttgcgaaagcagattaagaaaatggaggt 118
>ref|NM_164628.1| Drosophila melanogaster Ribosomal protein L37A CG5827-RB, transcript variant B (RpL37A), mRNA Length = 696 Score = 48.1 bits (24), Expect = 0.035 Identities = 36/40 (90%) Strand = Plus / Plus Query: 55 aagcgcaccaagaaggctggaatcgtcgggaagtatggta 94 |||||||||||||||| ||||||||| || || ||||||| Sbjct: 124 aagcgcaccaagaaggttggaatcgttggtaaatatggta 163
>ref|NM_080042.2| Drosophila melanogaster Ribosomal protein L37A CG5827-RA, transcript variant A (RpL37A), mRNA Length = 659 Score = 48.1 bits (24), Expect = 0.035 Identities = 36/40 (90%) Strand = Plus / Plus Query: 55 aagcgcaccaagaaggctggaatcgtcgggaagtatggta 94 |||||||||||||||| ||||||||| || || ||||||| Sbjct: 87 aagcgcaccaagaaggttggaatcgttggtaaatatggta 126
>gb|AY071725.1| Drosophila melanogaster RH41593 full length cDNA Length = 524 Score = 48.1 bits (24), Expect = 0.035 Identities = 36/40 (90%) Strand = Plus / Plus Query: 55 aagcgcaccaagaaggctggaatcgtcgggaagtatggta 94 |||||||||||||||| ||||||||| || || ||||||| Sbjct: 87 aagcgcaccaagaaggttggaatcgttggtaaatatggta 126
>gb|AY071189.1| Drosophila melanogaster RE23595 full length cDNA Length = 519 Score = 48.1 bits (24), Expect = 0.035 Identities = 36/40 (90%) Strand = Plus / Plus Query: 55 aagcgcaccaagaaggctggaatcgtcgggaagtatggta 94 |||||||||||||||| ||||||||| || || ||||||| Sbjct: 86 aagcgcaccaagaaggttggaatcgttggtaaatatggta 125
>gb|AC008233.3|AC008233 Drosophila melanogaster, chromosome 2L, region 25C-25C, BAC clone BACR13M11, complete sequence Length = 162387 Score = 48.1 bits (24), Expect = 0.035 Identities = 36/40 (90%) Strand = Plus / Plus Query: 55 aagcgcaccaagaaggctggaatcgtcgggaagtatggta 94 |||||||||||||||| ||||||||| || || ||||||| Sbjct: 127533 aagcgcaccaagaaggttggaatcgttggtaaatatggta 127572
>gb|AE003608.5| Drosophila melanogaster chromosome 2L, section 17 of 83 of the complete sequence Length = 174887 Score = 48.1 bits (24), Expect = 0.035 Identities = 36/40 (90%) Strand = Plus / Plus Query: 55 aagcgcaccaagaaggctggaatcgtcgggaagtatggta 94 |||||||||||||||| ||||||||| || || ||||||| Sbjct: 129806 aagcgcaccaagaaggttggaatcgttggtaaatatggta 129845
>ref|XM_675471.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7294.2), mRNA Length = 2133 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 193 ctgcgtaagcagatcaagaagatggaggtgtctcagcac 231 |||||||||||| | ||||||||||| ||||| |||||| Sbjct: 64 ctgcgtaagcaggtgaagaagatggaagtgtcccagcac 102
>ref|XM_675035.1| Plasmodium berghei strain ANKA hypothetical protein (PB001065.02.0) partial mRNA Length = 1821 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 510 taattttgtcttctgattttagg 532 ||||||||||||||||||||||| Sbjct: 1501 taattttgtcttctgattttagg 1479
>dbj|AB226168.1| Aspergillus oryzae cDNA, contig sequence: AoEST3026 Length = 520 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 193 ctgcgtaagcagatcaagaagatggaggtgtctcagcac 231 |||||||||||| | ||||||||||| ||||| |||||| Sbjct: 129 ctgcgtaagcaggtgaagaagatggaagtgtcccagcac 167
>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 Length = 1779707 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 193 ctgcgtaagcagatcaagaagatggaggtgtctcagcac 231 |||||||||||| | ||||||||||| ||||| |||||| Sbjct: 334897 ctgcgtaagcaggtgaagaagatggaagtgtcccagcac 334935
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 19 gcagccgcctcctgctactcgccgccg 45 |||||||||||||||| |||||||||| Sbjct: 1651604 gcagccgcctcctgctcctcgccgccg 1651578
>gb|AE001439.1| Helicobacter pylori J99, complete genome Length = 1643831 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 518 tcttctgattttaggatctttga 540 ||||||||||||||||||||||| Sbjct: 491574 tcttctgattttaggatctttga 491552
>dbj|AB084028.1| Helicobacter pylori gyrB gene for gyrase B, partial cds, strain:ATCC11638 Length = 1168 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 518 tcttctgattttaggatctttga 540 ||||||||||||||||||||||| Sbjct: 1083 tcttctgattttaggatctttga 1061
>ref|XM_817786.1| Trypanosoma brucei TREU927 60S ribosomal proteins L37 (Tb10.70.0465) partial mRNA Length = 282 Score = 42.1 bits (21), Expect = 2.2 Identities = 48/57 (84%) Strand = Plus / Plus Query: 207 caagaagatggaggtgtctcagcactccaagtacttctgtgaattctgcgggaagtt 263 ||||||| |||||||||||||||| | || |||||||| |||||||||||||| Sbjct: 78 caagaagctggaggtgtctcagcatgcgaaacacttctgttccttctgcgggaagtt 134
>ref|XM_720393.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05085) partial mRNA Length = 5438 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 512 attttgtcttctgattttagg 532 ||||||||||||||||||||| Sbjct: 3199 attttgtcttctgattttagg 3179
>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome Length = 2414465 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 450 agtggaattaaagacttcaaatatctgtatttt 482 ||||||||||||| ||||||| |||||||||| Sbjct: 1371185 agtggaattaaagggttcaaatttctgtatttt 1371153
>emb|BX571814.10| Zebrafish DNA sequence from clone XX-7A10 in linkage group 25, complete sequence Length = 87559 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 472 atctgtattttggctattcag 492 ||||||||||||||||||||| Sbjct: 30012 atctgtattttggctattcag 29992
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 206 tcaagaagatggaggtgtctcagca 230 ||||||||||| ||||||||||||| Sbjct: 29190666 tcaagaagatgaaggtgtctcagca 29190642
>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome Length = 3031430 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 591 tttctatttgtgatgccattgttac 615 ||||||||||||||| ||||||||| Sbjct: 927630 tttctatttgtgatgtcattgttac 927606
>dbj|AP004324.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1215_E11 Length = 105301 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 206 tcaagaagatggaggtgtctcagca 230 ||||||||||| ||||||||||||| Sbjct: 57953 tcaagaagatgaaggtgtctcagca 57929
>dbj|AK102136.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085H14, full insert sequence Length = 2244 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 206 tcaagaagatggaggtgtctcagca 230 ||||||||||| ||||||||||||| Sbjct: 1037 tcaagaagatgaaggtgtctcagca 1061
>dbj|AK073179.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033004F21, full insert sequence Length = 2507 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 206 tcaagaagatggaggtgtctcagca 230 ||||||||||| ||||||||||||| Sbjct: 1368 tcaagaagatgaaggtgtctcagca 1392
>dbj|AK061641.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-B03, full insert sequence Length = 1571 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 206 tcaagaagatggaggtgtctcagca 230 ||||||||||| ||||||||||||| Sbjct: 434 tcaagaagatgaaggtgtctcagca 458
>gb|AC150530.4| Bos taurus BAC CH240-86O22 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 190177 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ggtgtctcagcactccaagt 238 |||||||||||||||||||| Sbjct: 8158 ggtgtctcagcactccaagt 8177
>gb|AC110197.9| Mus musculus chromosome 1, clone RP24-405O20, complete sequence Length = 144856 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 tctgctattttctgaaatta 154 |||||||||||||||||||| Sbjct: 110931 tctgctattttctgaaatta 110950
>ref|XM_598735.2| PREDICTED: Bos taurus similar to zinc finger protein 333 (LOC520490), partial mRNA Length = 1119 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 atgcaaggactgtgggaagg 316 |||||||||||||||||||| Sbjct: 453 atgcaaggactgtgggaagg 472
>ref|XM_960237.1| Neurospora crassa OR74A hypothetical protein (NCU03230.1) partial mRNA Length = 1131 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 agatcaagaagatggaggtg 222 |||||||||||||||||||| Sbjct: 956 agatcaagaagatggaggtg 975
>ref|XM_330665.1| Neurospora crassa OR74A hypothetical protein (NCU03230.1) partial mRNA Length = 1131 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 agatcaagaagatggaggtg 222 |||||||||||||||||||| Sbjct: 956 agatcaagaagatggaggtg 975
>ref|XM_817189.1| Trypanosoma brucei TREU927 60S ribosomal protein L37a (Tb10.100.0110) partial mRNA Length = 282 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 207 caagaagatggaggtgtctcagca 230 ||||||| |||||||||||||||| Sbjct: 78 caagaagctggaggtgtctcagca 101
>gb|AY422214.1| Erwinia amylovora strain LebB66 plasmid pEL60 complete sequence Length = 60145 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 tgactcttttccctgttcat 129 |||||||||||||||||||| Sbjct: 9290 tgactcttttccctgttcat 9271
>emb|AL117373.14|HS1188A21 Human DNA sequence from clone RP5-1188A21 on chromosome 6q22.32-22.3, complete sequence Length = 78603 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 462 gacttcaaatatctgtattt 481 |||||||||||||||||||| Sbjct: 23397 gacttcaaatatctgtattt 23378
>gb|AC148582.14| Gasterosteus aculeatus clone ch213-241e10, complete sequence Length = 209278 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 457 ttaaagacttcaaatatctg 476 |||||||||||||||||||| Sbjct: 98092 ttaaagacttcaaatatctg 98111
>gb|AC090858.6| Homo sapiens chromosome 11, clone RP11-676E14, complete sequence Length = 168906 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 506 ttagtaattttgtcttctgatttt 529 |||||| ||||||||||||||||| Sbjct: 135940 ttagtacttttgtcttctgatttt 135917
>dbj|AB232923.1| Oryzias latipes hox gene cluster, complete cds, contains hoxDa Length = 225033 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 457 ttaaagacttcaaatatctg 476 |||||||||||||||||||| Sbjct: 162104 ttaaagacttcaaatatctg 162123
>gb|AC021436.8| Homo sapiens chromosome , clone RP11-121C18, complete sequence Length = 180765 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 506 ttagtaattttgtcttctgatttt 529 |||||| ||||||||||||||||| Sbjct: 40679 ttagtacttttgtcttctgatttt 40656
>gb|AC021735.8| Homo sapiens chromosome 18, clone RP11-107G7, complete sequence Length = 170510 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 507 tagtaattttgtcttctgatttta 530 |||||||||||| ||||||||||| Sbjct: 22877 tagtaattttgtgttctgatttta 22900
>gb|AC091903.2| Homo sapiens chromosome 5 clone RP11-182I21, complete sequence Length = 194860 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 aattttgtcttctgatttta 530 |||||||||||||||||||| Sbjct: 96507 aattttgtcttctgatttta 96526
>gb|AC154830.2| Mus musculus BAC clone RP24-553I3 from chromosome 13, complete sequence Length = 178942 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 152 ttagcccttgcaatgttataggaa 175 |||||||||||||| ||||||||| Sbjct: 86023 ttagcccttgcaattttataggaa 86000
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 cgccgcagcagccgcctcct 31 |||||||||||||||||||| Sbjct: 16205941 cgccgcagcagccgcctcct 16205922
>gb|AC105388.3| Homo sapiens BAC clone RP11-173C9 from 4, complete sequence Length = 120662 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 atcttgaggaattcagtagt 444 |||||||||||||||||||| Sbjct: 118655 atcttgaggaattcagtagt 118674
>gb|AC158540.2| Pan troglodytes BAC clone CH251-315F23 from chromosome unknown, complete sequence Length = 200678 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 gacttcaaatatctgtattt 481 |||||||||||||||||||| Sbjct: 141109 gacttcaaatatctgtattt 141128
>gb|AC158117.2| Pan troglodytes BAC clone CH251-437A17 from chromosome unknown, complete sequence Length = 154069 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 462 gacttcaaatatctgtattt 481 |||||||||||||||||||| Sbjct: 17848 gacttcaaatatctgtattt 17829
>ref|XM_577778.1| PREDICTED: Rattus norvegicus similar to zinc finger protein 545 (LOC502314), mRNA Length = 1581 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 atgcaaggactgtgggaagg 316 |||||||||||||||||||| Sbjct: 999 atgcaaggactgtgggaagg 1018
>gb|AC069462.3| Homo sapiens chromosome 3 clone RP11-271E2 map 3p, complete sequence Length = 161577 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 gctattttctgaaattagcc 157 |||||||||||||||||||| Sbjct: 17979 gctattttctgaaattagcc 17998
>gb|AC090004.2| Homo sapiens chromosome 3 clone RP11-14A10 map 3p, complete sequence Length = 169596 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 gctattttctgaaattagcc 157 |||||||||||||||||||| Sbjct: 125385 gctattttctgaaattagcc 125404
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1344_B01 Length = 170912 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 cgccgcagcagccgcctcct 31 |||||||||||||||||||| Sbjct: 22457 cgccgcagcagccgcctcct 22438
>dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556H01 Length = 149800 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 cgccgcagcagccgcctcct 31 |||||||||||||||||||| Sbjct: 110542 cgccgcagcagccgcctcct 110523
>gb|AC117681.20| Mus musculus chromosome 1, clone RP23-436A22, complete sequence Length = 198868 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 tctgctattttctgaaatta 154 |||||||||||||||||||| Sbjct: 21401 tctgctattttctgaaatta 21420 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,768,378 Number of Sequences: 3902068 Number of extensions: 5768378 Number of successful extensions: 118512 Number of sequences better than 10.0: 87 Number of HSP's better than 10.0 without gapping: 87 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 118153 Number of HSP's gapped (non-prelim): 343 length of query: 630 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 607 effective length of database: 17,143,297,704 effective search space: 10405981706328 effective search space used: 10405981706328 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)