ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags27h20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK071863.1| Oryza sativa (japonica cultivar-group) cDNA clon... 311 1e-81
2ref|NM_191365.1| Oryza sativa (japonica cultivar-group), predic... 242 1e-60
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
4dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
5emb|AL355102.5|CNS05TCL Human chromosome 14 DNA sequence BAC R-4... 44 0.46
6gb|AC166830.3| Mus musculus BAC clone RP23-246O1 from chromosome... 42 1.8
7gb|AC161000.5| Mus musculus BAC clone RP23-51A9 from chromosome ... 42 1.8
8gb|AC090457.6| Homo sapiens chromosome 18, clone RP11-357H3, com... 42 1.8
9gb|AC011095.5|AC011095 Homo sapiens, clone RP11-1O2, complete se... 42 1.8
10gb|AY665587.1| Rattus norvegicus strain CD aldehyde oxidase 2 (A... 40 7.2
11gb|AC105981.10| Mus musculus chromosome 8, clone RP24-210I22, co... 40 7.2
12gb|AC146500.2| Danio rerio clone CH211-130P22, complete sequence 40 7.2
13gb|AC126257.4| Mus musculus BAC clone RP24-247A8 from chromosome... 40 7.2
14emb|CR392003.9| Zebrafish DNA sequence from clone DKEY-242N9 in ... 40 7.2
15gb|AC102819.5| Mus musculus chromosome 8, clone RP23-117H21, com... 40 7.2
16gb|AY325166.1| Rattus norvegicus Aa2-245 mRNA, complete cds 40 7.2
17gb|AC123518.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.2
18emb|AL607091.12| Mouse DNA sequence from clone RP23-287F5 on chr... 40 7.2
19emb|CR925757.8| Zebrafish DNA sequence from clone CH211-208H16 i... 40 7.2
20emb|BX649211.10| Zebrafish DNA sequence from clone DKEY-215O18 i... 40 7.2
21dbj|AK095653.1| Homo sapiens cDNA FLJ38334 fis, clone FCBBF3026236 40 7.2
22dbj|AK139536.1| Mus musculus 2 cells egg cDNA, RIKEN full-length... 40 7.2
23gb|AC073333.5| Homo sapiens BAC clone RP11-455J15 from 7, comple... 40 7.2
24dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
25dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
26emb|BX817085.1|CNS0ABU3 Arabidopsis thaliana Full-length cDNA Co... 40 7.2
27gb|AC108049.5| Homo sapiens BAC clone RP11-325P16 from 2, comple... 40 7.2
28ref|XM_579192.1| PREDICTED: Rattus norvegicus hypothetical gene ... 40 7.2
29gb|AC098485.6| Homo sapiens BAC clone CTD-2053I13 from 2, comple... 40 7.2
30gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.2
31gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.2
32ref|NM_001008523.1| Rattus norvegicus similar to aldehyde oxidas... 40 7.2
33emb|AL731883.4|CNS08C8N Oryza sativa chromosome 12, . BAC OSJNBa... 40 7.2
34emb|AL731785.2|CNS08C89 Oryza sativa chromosome 12, . BAC OSJNBa... 40 7.2
35dbj|AB058780.1| Homo sapiens mRNA for KIAA1877 protein, partial cds 40 7.2

>dbj|AK071863.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023122I17, full
           insert sequence
          Length = 1238

 Score =  311 bits (157), Expect = 1e-81
 Identities = 331/389 (85%)
 Strand = Plus / Plus

                                                                       
Query: 50  aaaacaggattgccttgcctctgagtgtcttgggtaggacaaagacaaacatcaatttga 109
           |||| ||||| || |||||||| ||||| ||| | |||||||||||||||||||  ||||
Sbjct: 376 aaaataggatcgcattgcctctaagtgtattgagcaggacaaagacaaacatcagcttga 435

                                                                       
Query: 110 tggcagacgatttcaaaacactggttaacaattactcccttgccgggcttgttgtgggtt 169
           |||| || ||||||  |||  ||||    || ||||||||||| ||  ||||||| || |
Sbjct: 436 tggcggatgatttcgtaactttggtctcaaaatactcccttgcaggctttgttgtcggct 495

                                                                       
Query: 170 atccattcaacttacagggtcaatcttctccagatgcatcacaagtaagccttctcgtag 229
           |||| |||||||| ||||||||||||  |||| |||||| ||||||||| ||||| || |
Sbjct: 496 atccgttcaacttgcagggtcaatctagtccaaatgcattacaagtaaggcttcttgttg 555

                                                                       
Query: 230 gagaactttgtaaaactgggaaacttgatgatttgagctacacatattgggatgaaaatt 289
           |||| || |||||||||||||||||||||||| |||| ||||| ||||||||||||||||
Sbjct: 556 gagagctctgtaaaactgggaaacttgatgatatgagttacacctattgggatgaaaatt 615

                                                                       
Query: 290 ttacctcaaagtgcgtagaagcccttttaaatcctctgaacctaaacgatcgagttgaga 349
           ||||||| ||||| ||||||||||||||| |||||||||| ||| | || | |||||| |
Sbjct: 616 ttacctcgaagtgtgtagaagcccttttacatcctctgaaactacatgacccagttgaaa 675

                                                                       
Query: 350 cgaaaacaatgacagataaatttgctgcagtttgcatactccagggttatttagataaca 409
           | |||||||||||||||||||||||||| ||||||||||||||| | ||  ||||||| |
Sbjct: 676 ccaaaacaatgacagataaatttgctgcggtttgcatactccagcgctacctagataata 735

                                        
Query: 410 tgaacagagcattgacatctgctgataat 438
           ||||||||| ||||| |||||| ||||||
Sbjct: 736 tgaacagagaattgagatctgcagataat 764



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>ref|NM_191365.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1704

 Score =  242 bits (122), Expect = 1e-60
 Identities = 206/234 (88%)
 Strand = Plus / Plus

                                                                       
Query: 205 gcatcacaagtaagccttctcgtaggagaactttgtaaaactgggaaacttgatgatttg 264
           |||| ||||||||| ||||| || ||||| || |||||||||||||||||||||||| ||
Sbjct: 208 gcattacaagtaaggcttcttgttggagagctctgtaaaactgggaaacttgatgatatg 267

                                                                       
Query: 265 agctacacatattgggatgaaaattttacctcaaagtgcgtagaagcccttttaaatcct 324
           || ||||| ||||||||||||||||||||||| ||||| ||||||||||||||| |||||
Sbjct: 268 agttacacctattgggatgaaaattttacctcgaagtgtgtagaagcccttttacatcct 327

                                                                       
Query: 325 ctgaacctaaacgatcgagttgagacgaaaacaatgacagataaatttgctgcagtttgc 384
           ||||| ||| | || | |||||| || |||||||||||||||||||||||||| ||||||
Sbjct: 328 ctgaaactacatgacccagttgaaaccaaaacaatgacagataaatttgctgcggtttgc 387

                                                                 
Query: 385 atactccagggttatttagataacatgaacagagcattgacatctgctgataat 438
           ||||||||| | ||  ||||||| |||||||||| ||||| |||||| ||||||
Sbjct: 388 atactccagcgctacctagataatatgaacagagaattgagatctgcagataat 441



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                       
Query: 50  aaaacaggattgccttgcctctgagtgtcttgggtaggacaaagacaaacatcaatttga 109
           |||| ||||| || |||||||| ||||| ||| | |||||||||||||||||||  ||||
Sbjct: 125 aaaataggatcgcattgcctctaagtgtattgagcaggacaaagacaaacatcagcttga 184

                         
Query: 110 tggcagacgatttc 123
           |||| || ||||||
Sbjct: 185 tggcggatgatttc 198



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  111 bits (56), Expect = 2e-21
 Identities = 86/96 (89%)
 Strand = Plus / Plus

                                                                            
Query: 299      agtgcgtagaagcccttttaaatcctctgaacctaaacgatcgagttgagacgaaaacaa 358
                |||| ||||||||||||||| |||||||||| ||| | || | |||||| || |||||||
Sbjct: 32185748 agtgtgtagaagcccttttacatcctctgaaactacatgacccagttgaaaccaaaacaa 32185807

                                                    
Query: 359      tgacagataaatttgctgcagtttgcatactccagg 394
                ||||||||||||||||||| ||||||||||||||||
Sbjct: 32185808 tgacagataaatttgctgcggtttgcatactccagg 32185843



 Score =  111 bits (56), Expect = 2e-21
 Identities = 83/92 (90%)
 Strand = Plus / Plus

                                                                            
Query: 205      gcatcacaagtaagccttctcgtaggagaactttgtaaaactgggaaacttgatgatttg 264
                |||| ||||||||| ||||| || ||||| || |||||||||||||||||||||||| ||
Sbjct: 32185511 gcattacaagtaaggcttcttgttggagagctctgtaaaactgggaaacttgatgatatg 32185570

                                                
Query: 265      agctacacatattgggatgaaaattttacctc 296
                || ||||| |||||||||||||||||||||||
Sbjct: 32185571 agttacacctattgggatgaaaattttacctc 32185602



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                      
Query: 142      tactcccttgccgggcttgttgtgggttatccattcaacttacagggtcaatct 195
                ||||||||||| ||  ||||||| || ||||| |||||||| ||||||||||||
Sbjct: 32185360 tactcccttgcaggctttgttgtcggctatccgttcaacttgcagggtcaatct 32185413



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                       
Query: 85       aggacaaagacaaacatcaatttgatggcagacgatttc 123
                |||||||||||||||||||  |||||||| || ||||||
Sbjct: 32184830 aggacaaagacaaacatcagcttgatggcggatgatttc 32184868



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>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0403C05
          Length = 151085

 Score =  111 bits (56), Expect = 2e-21
 Identities = 86/96 (89%)
 Strand = Plus / Plus

                                                                         
Query: 299   agtgcgtagaagcccttttaaatcctctgaacctaaacgatcgagttgagacgaaaacaa 358
             |||| ||||||||||||||| |||||||||| ||| | || | |||||| || |||||||
Sbjct: 56501 agtgtgtagaagcccttttacatcctctgaaactacatgacccagttgaaaccaaaacaa 56560

                                                 
Query: 359   tgacagataaatttgctgcagtttgcatactccagg 394
             ||||||||||||||||||| ||||||||||||||||
Sbjct: 56561 tgacagataaatttgctgcggtttgcatactccagg 56596



 Score =  111 bits (56), Expect = 2e-21
 Identities = 83/92 (90%)
 Strand = Plus / Plus

                                                                         
Query: 205   gcatcacaagtaagccttctcgtaggagaactttgtaaaactgggaaacttgatgatttg 264
             |||| ||||||||| ||||| || ||||| || |||||||||||||||||||||||| ||
Sbjct: 56264 gcattacaagtaaggcttcttgttggagagctctgtaaaactgggaaacttgatgatatg 56323

                                             
Query: 265   agctacacatattgggatgaaaattttacctc 296
             || ||||| |||||||||||||||||||||||
Sbjct: 56324 agttacacctattgggatgaaaattttacctc 56355



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                   
Query: 142   tactcccttgccgggcttgttgtgggttatccattcaacttacagggtcaatct 195
             ||||||||||| ||  ||||||| || ||||| |||||||| ||||||||||||
Sbjct: 56113 tactcccttgcaggctttgttgtcggctatccgttcaacttgcagggtcaatct 56166



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 85    aggacaaagacaaacatcaatttgatggcagacgatttc 123
             |||||||||||||||||||  |||||||| || ||||||
Sbjct: 55583 aggacaaagacaaacatcagcttgatggcggatgatttc 55621



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>emb|AL355102.5|CNS05TCL Human chromosome 14 DNA sequence BAC R-404P21 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 201844

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 277    tgggatgaaaattttacctcaa 298
              ||||||||||||||||||||||
Sbjct: 146750 tgggatgaaaattttacctcaa 146729



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>gb|AC166830.3| Mus musculus BAC clone RP23-246O1 from chromosome 13, complete sequence
          Length = 213487

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 476    catttgcctcttaaaagttcc 496
              |||||||||||||||||||||
Sbjct: 205936 catttgcctcttaaaagttcc 205956



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>gb|AC161000.5| Mus musculus BAC clone RP23-51A9 from chromosome 13, complete sequence
          Length = 216751

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 476   catttgcctcttaaaagttcc 496
             |||||||||||||||||||||
Sbjct: 93982 catttgcctcttaaaagttcc 94002



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>gb|AC090457.6| Homo sapiens chromosome 18, clone RP11-357H3, complete sequence
          Length = 173765

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 120   tttcaaaacactggttaacaattac 144
             ||||||| |||||||||||||||||
Sbjct: 51846 tttcaaagcactggttaacaattac 51822



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>gb|AC011095.5|AC011095 Homo sapiens, clone RP11-1O2, complete sequence
          Length = 157051

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 120    tttcaaaacactggttaacaattac 144
              ||||||| |||||||||||||||||
Sbjct: 119643 tttcaaagcactggttaacaattac 119619



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>gb|AY665587.1| Rattus norvegicus strain CD aldehyde oxidase 2 (Aoh2) mRNA, complete
            cds
          Length = 4879

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 285  aaattttacctcaaagtgcg 304
            ||||||||||||||||||||
Sbjct: 1689 aaattttacctcaaagtgcg 1708



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>gb|AC105981.10| Mus musculus chromosome 8, clone RP24-210I22, complete sequence
          Length = 167656

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 257   atgatttgagctacacatat 276
             ||||||||||||||||||||
Sbjct: 30147 atgatttgagctacacatat 30128



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>gb|AC146500.2| Danio rerio clone CH211-130P22, complete sequence
          Length = 165269

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 72    gagtgtcttgggtaggacaaagac 95
             |||||||||||| |||||||||||
Sbjct: 29426 gagtgtcttgggaaggacaaagac 29403



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>gb|AC126257.4| Mus musculus BAC clone RP24-247A8 from chromosome 9, complete sequence
          Length = 174764

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 183   acagggtcaatcttctccag 202
             ||||||||||||||||||||
Sbjct: 27431 acagggtcaatcttctccag 27450



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>emb|CR392003.9| Zebrafish DNA sequence from clone DKEY-242N9 in linkage group 3, complete
              sequence
          Length = 182043

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 72     gagtgtcttgggtaggacaaagac 95
              |||||||||||| |||||||||||
Sbjct: 158151 gagtgtcttgggaaggacaaagac 158174



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>gb|AC102819.5| Mus musculus chromosome 8, clone RP23-117H21, complete sequence
          Length = 191116

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 257    atgatttgagctacacatat 276
              ||||||||||||||||||||
Sbjct: 181228 atgatttgagctacacatat 181209



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>gb|AY325166.1| Rattus norvegicus Aa2-245 mRNA, complete cds
          Length = 2878

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 285  aaattttacctcaaagtgcg 304
            ||||||||||||||||||||
Sbjct: 2240 aaattttacctcaaagtgcg 2259



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>gb|AC123518.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0088N01, complete sequence
          Length = 123954

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 275   attgggatgaaaattttacc 294
             ||||||||||||||||||||
Sbjct: 41111 attgggatgaaaattttacc 41130



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>emb|AL607091.12| Mouse DNA sequence from clone RP23-287F5 on chromosome 11 Contains the 3'
              end of the gene for a novel protein similar to human PDZ
              domain containing guanine nucleotide exchange factor (GEF)
              2 PDZGEF2 and the 3' end of the gene for a novel protein
              similar to human non-kinase Cdc42 effector protein SPEC2,
              complete sequence
          Length = 192912

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 500    cgcctgtcagtctttcttgg 519
              ||||||||||||||||||||
Sbjct: 181741 cgcctgtcagtctttcttgg 181760



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>emb|CR925757.8| Zebrafish DNA sequence from clone CH211-208H16 in linkage group 5,
             complete sequence
          Length = 154617

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 351   gaaaacaatgacagataaat 370
             ||||||||||||||||||||
Sbjct: 63963 gaaaacaatgacagataaat 63982



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>emb|BX649211.10| Zebrafish DNA sequence from clone DKEY-215O18 in linkage group 3,
             complete sequence
          Length = 125992

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 72    gagtgtcttgggtaggacaaagac 95
             |||||||||||| |||||||||||
Sbjct: 46080 gagtgtcttgggaaggacaaagac 46103



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>dbj|AK095653.1| Homo sapiens cDNA FLJ38334 fis, clone FCBBF3026236
          Length = 2721

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 271  acatattgggatgaaaattt 290
            ||||||||||||||||||||
Sbjct: 1047 acatattgggatgaaaattt 1028



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>dbj|AK139536.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library,
            clone:B020003J24 product:unclassifiable, full insert
            sequence
          Length = 3298

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 500  cgcctgtcagtctttcttgg 519
            ||||||||||||||||||||
Sbjct: 1533 cgcctgtcagtctttcttgg 1552



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>gb|AC073333.5| Homo sapiens BAC clone RP11-455J15 from 7, complete sequence
          Length = 165616

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    acaaagacaaacatcaattt 107
             ||||||||||||||||||||
Sbjct: 52765 acaaagacaaacatcaattt 52746



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 90       aaagacaaacatcaatttga 109
                ||||||||||||||||||||
Sbjct: 13060491 aaagacaaacatcaatttga 13060510



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 275     attgggatgaaaattttacc 294
               ||||||||||||||||||||
Sbjct: 5309104 attgggatgaaaattttacc 5309085



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>emb|BX817085.1|CNS0ABU3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH84ZH11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 402

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 38  gtttctgaccgcaaaacagg 57
           ||||||||||||||||||||
Sbjct: 256 gtttctgaccgcaaaacagg 237



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>gb|AC108049.5| Homo sapiens BAC clone RP11-325P16 from 2, complete sequence
          Length = 89604

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 271   acatattgggatgaaaattt 290
             ||||||||||||||||||||
Sbjct: 75415 acatattgggatgaaaattt 75434



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>ref|XM_579192.1| PREDICTED: Rattus norvegicus hypothetical gene supported by
            NM_001008523 (LOC497839), mRNA
          Length = 4880

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 285  aaattttacctcaaagtgcg 304
            ||||||||||||||||||||
Sbjct: 1690 aaattttacctcaaagtgcg 1709



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>gb|AC098485.6| Homo sapiens BAC clone CTD-2053I13 from 2, complete sequence
          Length = 88404

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    gacaaacatcaatttgatgg 112
             ||||||||||||||||||||
Sbjct: 69493 gacaaacatcaatttgatgg 69474



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 275     attgggatgaaaattttacc 294
               ||||||||||||||||||||
Sbjct: 5375581 attgggatgaaaattttacc 5375562



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 90       aaagacaaacatcaatttga 109
                ||||||||||||||||||||
Sbjct: 13014765 aaagacaaacatcaatttga 13014784



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>ref|NM_001008523.1| Rattus norvegicus similar to aldehyde oxidase structural homolog 2
            (RGD1311975), mRNA
          Length = 4879

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 285  aaattttacctcaaagtgcg 304
            ||||||||||||||||||||
Sbjct: 1689 aaattttacctcaaagtgcg 1708



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>emb|AL731883.4|CNS08C8N Oryza sativa chromosome 12, . BAC OSJNBa0024B03 of library OSJNBa
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 148110

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 90   aaagacaaacatcaatttga 109
            ||||||||||||||||||||
Sbjct: 7477 aaagacaaacatcaatttga 7458



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>emb|AL731785.2|CNS08C89 Oryza sativa chromosome 12, . BAC OSJNBa0037L20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 178827

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    aaagacaaacatcaatttga 109
             ||||||||||||||||||||
Sbjct: 49694 aaagacaaacatcaatttga 49713



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>dbj|AB058780.1| Homo sapiens mRNA for KIAA1877 protein, partial cds
          Length = 6782

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 271  acatattgggatgaaaattt 290
            ||||||||||||||||||||
Sbjct: 2956 acatattgggatgaaaattt 2937


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,774,861
Number of Sequences: 3902068
Number of extensions: 4774861
Number of successful extensions: 90152
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90002
Number of HSP's gapped (non-prelim): 150
length of query: 532
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 509
effective length of database: 17,143,297,704
effective search space: 8725938531336
effective search space used: 8725938531336
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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