| Clone Name | bags26p15 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_185521.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2383 Score = 658 bits (332), Expect = 0.0 Identities = 488/540 (90%) Strand = Plus / Plus Query: 12 acactggaaagactatggttgatgcttcattaggtgagataatgaccacatgtgagaaga 71 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 655 acactggaaagactatggttgatgcttcattaggtgagataatgaccacctgtgagaaga 714 Query: 72 ttcactggcttttggatgagggtgagaagtggttaaagcctgagtacaggtcttgtggga 131 || ||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||| Sbjct: 715 ttacctggcttttggatgagggtgagaagtggttaaaacctgaatacaggtcctgtggga 774 Query: 132 gatcaatgctacacaaaacagcgaaggttgaattctatcctctcggggtgattggtgcaa 191 |||||||||| ||||| | ||| || ||||| |||||||| || || || |||||||| | Sbjct: 775 gatcaatgcttcacaagaaagcaaaagttgagttctatccacttggagttattggtgcga 834 Query: 192 ttgtatcatggaattatcctttccacaatgtgtttaatccgatgctggctgcagtattct 251 |||| || |||||||| || ||||||||||| || ||||| |||||||||||| |||||| Sbjct: 835 ttgtgtcttggaattaccccttccacaatgtattcaatccaatgctggctgcaatattct 894 Query: 252 ctggtaatgcagcagttataaaggtttcagagcatgcgagttggtccggctgtttttatt 311 ||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||| Sbjct: 895 ctggtaatgcagcagttataaaggtttcagagcatgcaagttggtcaggctgcttttatt 954 Query: 312 ctcgcatcatacaagcagctctgttagctgttggtgccccagataatctggttcacatag 371 ||| ||||||||||||||||| |||||||||||| |||||||||||||| || ||| Sbjct: 955 ttcgtatcatacaagcagctcttgcagctgttggtgcaccagataatctggtgcatataa 1014 Query: 372 taactggttttgcagaaacgggtcaagctcttgtatcttcagtggacaaaataatatttg 431 ||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 1015 taactggttttgcggaaacaggtcaagctcttgtatcttcagtcgacaaaataatatttg 1074 Query: 432 ttggatcacctggcgttggaaggatgattatgcaaaaagcatcggaaacattaatacctg 491 ||||||||||||| |||||||||||||| ||| | | ||||||||| ||||||||||||| Sbjct: 1075 ttggatcacctggtgttggaaggatgatcatgaacagagcatcggatacattaatacctg 1134 Query: 492 taactcttgagcttggtggcaaagatgcatttattgtgtgcgaagatgtggatttaccca 551 |||||||||| |||||||| ||||||||||||||||| || |||||||| || ||||||| Sbjct: 1135 taactcttgaacttggtggtaaagatgcatttattgtatgtgaagatgtagacttaccca 1194
>dbj|AK068462.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155B06, full insert sequence Length = 2383 Score = 658 bits (332), Expect = 0.0 Identities = 488/540 (90%) Strand = Plus / Plus Query: 12 acactggaaagactatggttgatgcttcattaggtgagataatgaccacatgtgagaaga 71 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 655 acactggaaagactatggttgatgcttcattaggtgagataatgaccacctgtgagaaga 714 Query: 72 ttcactggcttttggatgagggtgagaagtggttaaagcctgagtacaggtcttgtggga 131 || ||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||| Sbjct: 715 ttacctggcttttggatgagggtgagaagtggttaaaacctgaatacaggtcctgtggga 774 Query: 132 gatcaatgctacacaaaacagcgaaggttgaattctatcctctcggggtgattggtgcaa 191 |||||||||| ||||| | ||| || ||||| |||||||| || || || |||||||| | Sbjct: 775 gatcaatgcttcacaagaaagcaaaagttgagttctatccacttggagttattggtgcga 834 Query: 192 ttgtatcatggaattatcctttccacaatgtgtttaatccgatgctggctgcagtattct 251 |||| || |||||||| || ||||||||||| || ||||| |||||||||||| |||||| Sbjct: 835 ttgtgtcttggaattaccccttccacaatgtattcaatccaatgctggctgcaatattct 894 Query: 252 ctggtaatgcagcagttataaaggtttcagagcatgcgagttggtccggctgtttttatt 311 ||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||| Sbjct: 895 ctggtaatgcagcagttataaaggtttcagagcatgcaagttggtcaggctgcttttatt 954 Query: 312 ctcgcatcatacaagcagctctgttagctgttggtgccccagataatctggttcacatag 371 ||| ||||||||||||||||| |||||||||||| |||||||||||||| || ||| Sbjct: 955 ttcgtatcatacaagcagctcttgcagctgttggtgcaccagataatctggtgcatataa 1014 Query: 372 taactggttttgcagaaacgggtcaagctcttgtatcttcagtggacaaaataatatttg 431 ||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 1015 taactggttttgcggaaacaggtcaagctcttgtatcttcagtcgacaaaataatatttg 1074 Query: 432 ttggatcacctggcgttggaaggatgattatgcaaaaagcatcggaaacattaatacctg 491 ||||||||||||| |||||||||||||| ||| | | ||||||||| ||||||||||||| Sbjct: 1075 ttggatcacctggtgttggaaggatgatcatgaacagagcatcggatacattaatacctg 1134 Query: 492 taactcttgagcttggtggcaaagatgcatttattgtgtgcgaagatgtggatttaccca 551 |||||||||| |||||||| ||||||||||||||||| || |||||||| || ||||||| Sbjct: 1135 taactcttgaacttggtggtaaagatgcatttattgtatgtgaagatgtagacttaccca 1194
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 180 bits (91), Expect = 3e-42 Identities = 106/111 (95%) Strand = Plus / Minus Query: 12 acactggaaagactatggttgatgcttcattaggtgagataatgaccacatgtgagaaga 71 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 29222084 acactggaaagactatggttgatgcttcattaggtgagataatgaccacctgtgagaaga 29222025 Query: 72 ttcactggcttttggatgagggtgagaagtggttaaagcctgagtacaggt 122 || ||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 29222024 ttacctggcttttggatgagggtgagaagtggttaaaacctgaatacaggt 29221974 Score = 157 bits (79), Expect = 5e-35 Identities = 139/159 (87%) Strand = Plus / Minus Query: 118 caggtcttgtgggagatcaatgctacacaaaacagcgaaggttgaattctatcctctcgg 177 |||||| ||||||||||||||||| ||||| | ||| || ||||| |||||||| || || Sbjct: 29221360 caggtcctgtgggagatcaatgcttcacaagaaagcaaaagttgagttctatccacttgg 29221301 Query: 178 ggtgattggtgcaattgtatcatggaattatcctttccacaatgtgtttaatccgatgct 237 || |||||||| ||||| || |||||||| || ||||||||||| || ||||| ||||| Sbjct: 29221300 agttattggtgcgattgtgtcttggaattaccccttccacaatgtattcaatccaatgct 29221241 Query: 238 ggctgcagtattctctggtaatgcagcagttataaaggt 276 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 29221240 ggctgcaatattctctggtaatgcagcagttataaaggt 29221202 Score = 153 bits (77), Expect = 7e-34 Identities = 105/112 (93%), Gaps = 3/112 (2%) Strand = Plus / Minus Query: 12 acactggaaagactatggttgatgcttcattaggtgagataatgaccacatgtgagaaga 71 ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 29236511 acactggaaagactatggttgatgcttcactaggtgagataatgaccacctgtgagaag- 29236453 Query: 72 ttca-ctggcttttggatgagggtgagaagtggttaaagcctgagtacaggt 122 ||| ||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 29236452 -tcacctggcttttggatgagggtgagaagtggttaaaacctgaatacaggt 29236402 Score = 127 bits (64), Expect = 4e-26 Identities = 76/80 (95%) Strand = Plus / Minus Query: 378 gttttgcagaaacgggtcaagctcttgtatcttcagtggacaaaataatatttgttggat 437 ||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 29220661 gttttgcggaaacaggtcaagctcttgtatcttcagtcgacaaaataatatttgttggat 29220602 Query: 438 cacctggcgttggaaggatg 457 ||||||| |||||||||||| Sbjct: 29220601 cacctggtgttggaaggatg 29220582 Score = 115 bits (58), Expect = 2e-22 Identities = 94/106 (88%) Strand = Plus / Minus Query: 273 aggtttcagagcatgcgagttggtccggctgtttttattctcgcatcatacaagcagctc 332 |||||||||||||||| |||||||| ||||| ||||||| ||| |||||||||||||||| Sbjct: 29220855 aggtttcagagcatgcaagttggtcaggctgcttttattttcgtatcatacaagcagctc 29220796 Query: 333 tgttagctgttggtgccccagataatctggttcacatagtaactgg 378 | |||||||||||| |||||||||||||| || ||| ||||||| Sbjct: 29220795 ttgcagctgttggtgcaccagataatctggtgcatataataactgg 29220750 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Minus Query: 469 agcatcggaaacattaatacctgtaactcttgagcttggtggcaaagatgcatttattgt 528 ||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 29220221 agcatcggatacattaatacctgtaactcttgaacttggtggtaaagatgcatttattgt 29220162 Query: 529 gtgcgaagatgtggatttaccca 551 || |||||||| || ||||||| Sbjct: 29220161 atgtgaagatgtagacttaccca 29220139
>dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0597G07 Length = 152928 Score = 180 bits (91), Expect = 3e-42 Identities = 106/111 (95%) Strand = Plus / Minus Query: 12 acactggaaagactatggttgatgcttcattaggtgagataatgaccacatgtgagaaga 71 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 10773 acactggaaagactatggttgatgcttcattaggtgagataatgaccacctgtgagaaga 10714 Query: 72 ttcactggcttttggatgagggtgagaagtggttaaagcctgagtacaggt 122 || ||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 10713 ttacctggcttttggatgagggtgagaagtggttaaaacctgaatacaggt 10663 Score = 157 bits (79), Expect = 5e-35 Identities = 139/159 (87%) Strand = Plus / Minus Query: 118 caggtcttgtgggagatcaatgctacacaaaacagcgaaggttgaattctatcctctcgg 177 |||||| ||||||||||||||||| ||||| | ||| || ||||| |||||||| || || Sbjct: 10049 caggtcctgtgggagatcaatgcttcacaagaaagcaaaagttgagttctatccacttgg 9990 Query: 178 ggtgattggtgcaattgtatcatggaattatcctttccacaatgtgtttaatccgatgct 237 || |||||||| ||||| || |||||||| || ||||||||||| || ||||| ||||| Sbjct: 9989 agttattggtgcgattgtgtcttggaattaccccttccacaatgtattcaatccaatgct 9930 Query: 238 ggctgcagtattctctggtaatgcagcagttataaaggt 276 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 9929 ggctgcaatattctctggtaatgcagcagttataaaggt 9891 Score = 153 bits (77), Expect = 7e-34 Identities = 105/112 (93%), Gaps = 3/112 (2%) Strand = Plus / Minus Query: 12 acactggaaagactatggttgatgcttcattaggtgagataatgaccacatgtgagaaga 71 ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 25200 acactggaaagactatggttgatgcttcactaggtgagataatgaccacctgtgagaag- 25142 Query: 72 ttca-ctggcttttggatgagggtgagaagtggttaaagcctgagtacaggt 122 ||| ||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 25141 -tcacctggcttttggatgagggtgagaagtggttaaaacctgaatacaggt 25091 Score = 127 bits (64), Expect = 4e-26 Identities = 76/80 (95%) Strand = Plus / Minus Query: 378 gttttgcagaaacgggtcaagctcttgtatcttcagtggacaaaataatatttgttggat 437 ||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9350 gttttgcggaaacaggtcaagctcttgtatcttcagtcgacaaaataatatttgttggat 9291 Query: 438 cacctggcgttggaaggatg 457 ||||||| |||||||||||| Sbjct: 9290 cacctggtgttggaaggatg 9271 Score = 115 bits (58), Expect = 2e-22 Identities = 94/106 (88%) Strand = Plus / Minus Query: 273 aggtttcagagcatgcgagttggtccggctgtttttattctcgcatcatacaagcagctc 332 |||||||||||||||| |||||||| ||||| ||||||| ||| |||||||||||||||| Sbjct: 9544 aggtttcagagcatgcaagttggtcaggctgcttttattttcgtatcatacaagcagctc 9485 Query: 333 tgttagctgttggtgccccagataatctggttcacatagtaactgg 378 | |||||||||||| |||||||||||||| || ||| ||||||| Sbjct: 9484 ttgcagctgttggtgcaccagataatctggtgcatataataactgg 9439 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Minus Query: 469 agcatcggaaacattaatacctgtaactcttgagcttggtggcaaagatgcatttattgt 528 ||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 8910 agcatcggatacattaatacctgtaactcttgaacttggtggtaaagatgcatttattgt 8851 Query: 529 gtgcgaagatgtggatttaccca 551 || |||||||| || ||||||| Sbjct: 8850 atgtgaagatgtagacttaccca 8828
>dbj|AP003816.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1165_F02 Length = 125993 Score = 180 bits (91), Expect = 3e-42 Identities = 106/111 (95%) Strand = Plus / Minus Query: 12 acactggaaagactatggttgatgcttcattaggtgagataatgaccacatgtgagaaga 71 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 62158 acactggaaagactatggttgatgcttcattaggtgagataatgaccacctgtgagaaga 62099 Query: 72 ttcactggcttttggatgagggtgagaagtggttaaagcctgagtacaggt 122 || ||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 62098 ttacctggcttttggatgagggtgagaagtggttaaaacctgaatacaggt 62048 Score = 157 bits (79), Expect = 5e-35 Identities = 139/159 (87%) Strand = Plus / Minus Query: 118 caggtcttgtgggagatcaatgctacacaaaacagcgaaggttgaattctatcctctcgg 177 |||||| ||||||||||||||||| ||||| | ||| || ||||| |||||||| || || Sbjct: 61434 caggtcctgtgggagatcaatgcttcacaagaaagcaaaagttgagttctatccacttgg 61375 Query: 178 ggtgattggtgcaattgtatcatggaattatcctttccacaatgtgtttaatccgatgct 237 || |||||||| ||||| || |||||||| || ||||||||||| || ||||| ||||| Sbjct: 61374 agttattggtgcgattgtgtcttggaattaccccttccacaatgtattcaatccaatgct 61315 Query: 238 ggctgcagtattctctggtaatgcagcagttataaaggt 276 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 61314 ggctgcaatattctctggtaatgcagcagttataaaggt 61276 Score = 153 bits (77), Expect = 7e-34 Identities = 105/112 (93%), Gaps = 3/112 (2%) Strand = Plus / Minus Query: 12 acactggaaagactatggttgatgcttcattaggtgagataatgaccacatgtgagaaga 71 ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 76585 acactggaaagactatggttgatgcttcactaggtgagataatgaccacctgtgagaag- 76527 Query: 72 ttca-ctggcttttggatgagggtgagaagtggttaaagcctgagtacaggt 122 ||| ||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 76526 -tcacctggcttttggatgagggtgagaagtggttaaaacctgaatacaggt 76476 Score = 127 bits (64), Expect = 4e-26 Identities = 76/80 (95%) Strand = Plus / Minus Query: 378 gttttgcagaaacgggtcaagctcttgtatcttcagtggacaaaataatatttgttggat 437 ||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 60735 gttttgcggaaacaggtcaagctcttgtatcttcagtcgacaaaataatatttgttggat 60676 Query: 438 cacctggcgttggaaggatg 457 ||||||| |||||||||||| Sbjct: 60675 cacctggtgttggaaggatg 60656 Score = 115 bits (58), Expect = 2e-22 Identities = 94/106 (88%) Strand = Plus / Minus Query: 273 aggtttcagagcatgcgagttggtccggctgtttttattctcgcatcatacaagcagctc 332 |||||||||||||||| |||||||| ||||| ||||||| ||| |||||||||||||||| Sbjct: 60929 aggtttcagagcatgcaagttggtcaggctgcttttattttcgtatcatacaagcagctc 60870 Query: 333 tgttagctgttggtgccccagataatctggttcacatagtaactgg 378 | |||||||||||| |||||||||||||| || ||| ||||||| Sbjct: 60869 ttgcagctgttggtgcaccagataatctggtgcatataataactgg 60824 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Minus Query: 469 agcatcggaaacattaatacctgtaactcttgagcttggtggcaaagatgcatttattgt 528 ||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 60295 agcatcggatacattaatacctgtaactcttgaacttggtggtaaagatgcatttattgt 60236 Query: 529 gtgcgaagatgtggatttaccca 551 || |||||||| || ||||||| Sbjct: 60235 atgtgaagatgtagacttaccca 60213
>ref|NM_185525.1| Oryza sativa (japonica cultivar-group), mRNA Length = 612 Score = 113 bits (57), Expect = 6e-22 Identities = 79/84 (94%), Gaps = 3/84 (3%) Strand = Plus / Plus Query: 12 acactggaaagactatggttgatgcttcattaggtgagataatgaccacatgtgagaaga 71 ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 428 acactggaaagactatggttgatgcttcactaggtgagataatgaccacctgtgagaag- 486 Query: 72 ttca-ctggcttttggatgagggt 94 ||| ||||||||||||||||||| Sbjct: 487 -tcacctggcttttggatgagggt 509
>gb|DQ059318.1| Zea mays RFLP core bin marker probe p-umc168 (CBM7.06), complete sequence Length = 1072 Score = 91.7 bits (46), Expect = 2e-15 Identities = 91/106 (85%) Strand = Plus / Plus Query: 273 aggtttcagagcatgcgagttggtccggctgtttttattctcgcatcatacaagcagctc 332 |||| ||||| ||||||| |||||| ||||| ||||||| ||| || ||||||||||||| Sbjct: 569 aggtctcagaacatgcgacttggtcgggctgcttttattttcgtattatacaagcagctc 628 Query: 333 tgttagctgttggtgccccagataatctggttcacatagtaactgg 378 | | |||||||||||| || || |||||||| |||||| ||||||| Sbjct: 629 tttcagctgttggtgcacctgagaatctggtgcacataataactgg 674 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 378 gttttgcagaaacgggtcaagctcttgtatcttcagtggacaaaataatatttgttggat 437 ||||||| ||||| || |||||||||||||| ||||| ||||||||||||||||| |||| Sbjct: 760 gttttgcggaaacaggccaagctcttgtatcatcagtagacaaaataatatttgtgggat 819 Query: 438 cacctggcgttggaa 452 |||| || ||||||| Sbjct: 820 caccaggtgttggaa 834
>gb|AC149545.1| Populus trichocarpa clone Pop1-71J23, complete sequence Length = 103543 Score = 75.8 bits (38), Expect = 1e-10 Identities = 88/102 (86%), Gaps = 2/102 (1%) Strand = Plus / Minus Query: 14 actggaaagactatggttgatgcttcattaggtgagataatgaccacatgtgagaagatt 73 ||||||||||| ||||| |||||||| ||||| || |||||||| ||||||||||||| | Sbjct: 72858 actggaaagacaatggtagatgcttctttaggagaaataatgacaacatgtgagaaga-t 72800 Query: 74 cac-tggcttttggatgagggtgagaagtggttaaagcctga 114 ||| |||||| | ||||||||||||||| |||||||||| Sbjct: 72799 cacttggcttctttcagagggtgagaagtggctaaagcctga 72758 Score = 69.9 bits (35), Expect = 8e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 485 atacctgtaactcttgagcttggtggcaaagatgcatttattgtgtgcgaagatg 539 ||||| ||||| |||||||||||||| |||||| ||||||||||||| ||||||| Sbjct: 71407 ataccggtaacacttgagcttggtggaaaagatccatttattgtgtgtgaagatg 71353 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 410 tcagtggacaaaataatatttgttggatcacctgg 444 ||||| || ||||| |||||||||||||||||||| Sbjct: 71812 tcagttgataaaatcatatttgttggatcacctgg 71778
>emb|BX824959.1|CNS0A6P2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH85ZG04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2107 Score = 69.9 bits (35), Expect = 8e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 487 acctgtaactcttgagcttggtggcaaagatgcatttat 525 |||||||||||||||||||||||| |||||||||||||| Sbjct: 999 acctgtaactcttgagcttggtggaaaagatgcatttat 1037 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 198 catggaattatcctttccacaatgtgtttaatccgatgctggctgcagtattctctggta 257 ||||||||||||| ||||||||| | || || || |||||||||||||| |||||||| | Sbjct: 714 catggaattatcccttccacaatattttcaaccctatgctggctgcagtcttctctggga 773 Query: 258 atg 260 ||| Sbjct: 774 atg 776
>ref|NM_202513.1| Arabidopsis thaliana ALDH22a1; aldehyde dehydrogenase/ oxidoreductase AT3G66658 (ALDH22a1) transcript variant AT3G66658.2 mRNA, complete cds Length = 2151 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 487 acctgtaactcttgagcttggtggcaaagatgcatttat 525 |||||| ||||||||||||||||| |||||||||||||| Sbjct: 1003 acctgtcactcttgagcttggtggaaaagatgcatttat 1041 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 198 catggaattatcctttccacaatgtgtttaatccgatgctggctgcagtattctctggta 257 ||||||||||||| ||||||||| | || || || |||||||||||||| |||||||| | Sbjct: 714 catggaattatcccttccacaatattttcaaccctatgctggctgcagtcttctctggga 773 Query: 258 atg 260 ||| Sbjct: 774 atg 776
>ref|NM_111545.3| Arabidopsis thaliana ALDH22a1; aldehyde dehydrogenase/ oxidoreductase AT3G66658 (ALDH22a1) transcript variant AT3G66658.1 mRNA, complete cds Length = 2155 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 487 acctgtaactcttgagcttggtggcaaagatgcatttat 525 |||||| ||||||||||||||||| |||||||||||||| Sbjct: 1003 acctgtcactcttgagcttggtggaaaagatgcatttat 1041 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 198 catggaattatcctttccacaatgtgtttaatccgatgctggctgcagtattctctggta 257 ||||||||||||| ||||||||| | || || || |||||||||||||| |||||||| | Sbjct: 714 catggaattatcccttccacaatattttcaaccctatgctggctgcagtcttctctggga 773 Query: 258 atg 260 ||| Sbjct: 774 atg 776
>emb|AJ584646.1| Arabidopsis thaliana mRNA for putative aldehyde dehydrogenase (aldh22A1 gene) Length = 1810 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 487 acctgtaactcttgagcttggtggcaaagatgcatttat 525 |||||| ||||||||||||||||| |||||||||||||| Sbjct: 886 acctgtcactcttgagcttggtggaaaagatgcatttat 924 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 198 catggaattatcctttccacaatgtgtttaatccgatgctggctgcagtattctctggta 257 ||||||||||||| ||||||||| | || || || |||||||||||||| |||||||| | Sbjct: 597 catggaattatcccttccacaatattttcaaccctatgctggctgcagtcttctctggga 656 Query: 258 atg 260 ||| Sbjct: 657 atg 659
>gb|AC036106.6|AC036106 Arabidopsis thaliana chromosome 3 BAC T8E24 genomic sequence, complete sequence Length = 51646 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 487 acctgtaactcttgagcttggtggcaaagatgcatttat 525 |||||| ||||||||||||||||| |||||||||||||| Sbjct: 23970 acctgtcactcttgagcttggtggaaaagatgcatttat 24008 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 198 catggaattatcctttccacaatgtgtttaatccgatgctggctgcagtattctctggta 257 ||||||||||||| ||||||||| | || || || |||||||||||||| |||||||| | Sbjct: 23294 catggaattatcccttccacaatattttcaaccctatgctggctgcagtcttctctggga 23353 Query: 258 atg 260 ||| Sbjct: 23354 atg 23356
>gb|AC152185.1| Medicago truncatula chromosome 2 BAC clone mth2-97e5, complete sequence Length = 132467 Score = 58.0 bits (29), Expect = 3e-05 Identities = 89/109 (81%) Strand = Plus / Minus Query: 14 actggaaagactatggttgatgcttcattaggtgagataatgaccacatgtgagaagatt 73 |||||||| || ||||| |||||||| |||| || |||||||| |||||||||||||| Sbjct: 93195 actggaaaaacaatggtagatgcttctctaggagaaataatgacaacatgtgagaagata 93136 Query: 74 cactggcttttggatgagggtgagaagtggttaaagcctgagtacaggt 122 | ||||| ||| |||||||| || || || || ||||||||||||| Sbjct: 93135 aattggctattgtcagagggtgaaaaatgtttgaaacctgagtacaggt 93087 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 500 gagcttggtggcaaagatgcatttattgtgtgcgaagatgtggat 544 ||||||||||| ||||||||||||||||| || ||||| |||||| Sbjct: 91624 gagcttggtggaaaagatgcatttattgtttgtgaagacgtggat 91580 Score = 40.1 bits (20), Expect = 7.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 407 tcttcagtggacaaaataatatttgttggatcacctggcgttgg 450 ||||| ||||| ||| | || ||||||||||||||||| ||||| Sbjct: 92114 tcttctgtggataaagtcatttttgttggatcacctggggttgg 92071
>ref|XM_452673.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C10615g predicted mRNA Length = 1923 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 191 attgtatcatggaattatcctttccacaa 219 ||||| || |||||||||||||||||||| Sbjct: 724 attgtttcttggaattatcctttccacaa 752
>ref|XM_382270.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG02094.1) partial mRNA Length = 1401 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 497 cttgagcttggtggcaaagatgcat 521 ||||||||||||||||||| ||||| Sbjct: 987 cttgagcttggtggcaaagttgcat 963
>emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome C of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1753957 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 191 attgtatcatggaattatcctttccacaa 219 ||||| || |||||||||||||||||||| Sbjct: 913276 attgtttcttggaattatcctttccacaa 913248
>gb|AC136454.4| Mus musculus BAC clone RP24-340J10 from 8, complete sequence Length = 172160 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 aaagactatggttgatgcttc 39 ||||||||||||||||||||| Sbjct: 122513 aaagactatggttgatgcttc 122533
>gb|AY744273.1| Penaeus monodon 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 468 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 20 taatgcagcagttataaagg 1
>gb|AY744272.1| Penaeus monodon 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 467 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 20 taatgcagcagttataaagg 1
>gb|AC161286.2| Pan troglodytes BAC clone CH251-332L6 from chromosome 7, complete sequence Length = 172473 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 cagtggacaaaataatattt 430 |||||||||||||||||||| Sbjct: 35039 cagtggacaaaataatattt 35058
>gb|DQ187946.1| Marsupenaeus japonicus 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 514 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 462 taatgcagcagttataaagg 481
>gb|AY046914.1| Litopenaeus vannamei 12S ribosomal RNA gene, partial sequence; tRNA-Val gene, complete sequence; and 16S ribosomal RNA gene, partial sequence; mitochondrial genes for mitochondrial products Length = 1379 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 1331 taatgcagcagttataaagg 1350
>gb|AY046913.1| Litopenaeus stylirostris 12S ribosomal RNA gene, partial sequence; tRNA-Val gene, complete sequence; and 16S ribosomal RNA gene, partial sequence; mitochondrial genes for mitochondrial products Length = 1380 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 1332 taatgcagcagttataaagg 1351
>gb|AY046912.1| Farfantepenaeus californiensis 12S ribosomal RNA gene, partial sequence; tRNA-Val gene, complete sequence; and 16S ribosomal RNA gene, partial sequence; mitochondrial genes for mitochondrial products Length = 1378 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 1330 taatgcagcagttataaagg 1349
>gb|AY853416.1| Marsupenaeus japonicus isolate AU32 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 468 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 448 taatgcagcagttataaagg 467
>gb|AY853415.1| Marsupenaeus japonicus isolate VN12 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 468 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 448 taatgcagcagttataaagg 467
>gb|AY853414.1| Marsupenaeus japonicus isolate PH1 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 468 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 448 taatgcagcagttataaagg 467
>gb|AY853413.1| Marsupenaeus japonicus isolate MB2 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 468 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 448 taatgcagcagttataaagg 467
>gb|AY853411.1| Marsupenaeus japonicus isolate ZJ1 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 468 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 448 taatgcagcagttataaagg 467
>gb|AY853410.1| Marsupenaeus japonicus isolate TW8 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 468 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 448 taatgcagcagttataaagg 467
>gb|AY853409.1| Marsupenaeus japonicus isolate HK20 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 468 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 448 taatgcagcagttataaagg 467
>gb|AY853408.1| Marsupenaeus japonicus isolate CB2 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 468 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 448 taatgcagcagttataaagg 467
>gb|AY853407.1| Marsupenaeus japonicus isolate CA2 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 468 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 448 taatgcagcagttataaagg 467
>gb|AF279829.1| Penaeus monodon 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 468 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 449 taatgcagcagttataaagg 468
>gb|AF279825.1| Melicertus canaliculatus 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 466 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 447 taatgcagcagttataaagg 466
>gb|AF279823.1| Melicertus longistylus 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 466 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 447 taatgcagcagttataaagg 466
>gb|AF279822.1| Melicertus plebejus 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 466 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 447 taatgcagcagttataaagg 466
>gb|AF279821.1| Melicertus latisulcatus 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 466 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 447 taatgcagcagttataaagg 466
>gb|AF279820.1| Marsupenaeus japonicus 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 466 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 447 taatgcagcagttataaagg 466
>gb|AF279819.1| Litopenaeus setiferus 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 468 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 449 taatgcagcagttataaagg 468
>gb|AF279818.1| Litopenaeus vannamei 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 467 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 448 taatgcagcagttataaagg 467
>gb|AF279812.1| Farfantepenaeus duorarum 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 467 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 448 taatgcagcagttataaagg 467
>gb|AY344192.1| Litopenaeus vannamei clone 104 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 530 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 463 taatgcagcagttataaagg 482
>gb|AY344191.1| Litopenaeus vannamei clone 100 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 529 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 462 taatgcagcagttataaagg 481
>gb|AY344190.1| Litopenaeus vannamei clone 208 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 527 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 460 taatgcagcagttataaagg 479
>gb|AY344189.1| Litopenaeus vannamei clone 290 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 529 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 461 taatgcagcagttataaagg 480
>gb|AY344188.1| Litopenaeus vannamei clone 238 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 529 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 461 taatgcagcagttataaagg 480
>gb|AY344187.1| Litopenaeus vannamei clone 240 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 528 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 461 taatgcagcagttataaagg 480
>gb|AY344186.1| Litopenaeus vannamei clone 236 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 528 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 461 taatgcagcagttataaagg 480
>gb|AY344185.1| Litopenaeus vannamei clone 298 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 530 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 462 taatgcagcagttataaagg 481
>gb|AY344184.1| Litopenaeus vannamei clone 280 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 529 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 462 taatgcagcagttataaagg 481
>emb|AL354752.11| Human DNA sequence from clone RP11-570O20 on chromosome Xq27.1-27.3, complete sequence Length = 69126 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 attatcctttccacaatgtg 223 |||||||||||||||||||| Sbjct: 38591 attatcctttccacaatgtg 38572
>gb|AE008806.1| Salmonella typhimurium LT2, section 110 of 220 of the complete genome Length = 21521 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 caagcagctctgttagctgt 342 |||||||||||||||||||| Sbjct: 19535 caagcagctctgttagctgt 19516
>emb|AL627274.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 10/20 Length = 256050 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 caagcagctctgttagctgt 342 |||||||||||||||||||| Sbjct: 137930 caagcagctctgttagctgt 137911
>gb|AY742276.1| Marsupenaeus japonicus isolate 19 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 468 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 448 taatgcagcagttataaagg 467
>gb|AY742275.1| Marsupenaeus japonicus isolate 9 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 468 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 448 taatgcagcagttataaagg 467
>gb|AY742274.1| Marsupenaeus japonicus isolate 6 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 468 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 448 taatgcagcagttataaagg 467
>gb|AY742273.1| Marsupenaeus japonicus isolate 15 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 468 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 448 taatgcagcagttataaagg 467
>gb|AY742272.1| Marsupenaeus japonicus isolate 14 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 468 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 448 taatgcagcagttataaagg 467
>gb|AY742271.1| Marsupenaeus japonicus isolate 1 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 468 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 448 taatgcagcagttataaagg 467
>gb|AF105039.1| Penaeus monodon 16S ribosomal RNA gene, mitochondrial gene for mitochondrial RNA, partial sequence Length = 471 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 451 taatgcagcagttataaagg 470
>gb|AY789493.1| Marsupenaeus japonicus isolate SP3 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 468 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 448 taatgcagcagttataaagg 467
>gb|AY789492.1| Marsupenaeus japonicus isolate JP4 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 468 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 448 taatgcagcagttataaagg 467
>gb|AY264914.1| Litopenaeus vannamei 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 504 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 466 taatgcagcagttataaagg 485
>gb|AY264911.1| Marsupenaeus japonicus 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 503 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 465 taatgcagcagttataaagg 484
>gb|AY264907.1| Melicertus canaliculatus 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 503 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 465 taatgcagcagttataaagg 484
>gb|AF255057.1|AF255057 Penaeus (Litopenaeus) stylirostris isolate sty07mxc 16S ribosomal RNA, partial sequence; mitochondrial gene for mitochondrial product Length = 485 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 456 taatgcagcagttataaagg 475
>gb|AF255056.1|AF255056 Penaeus (Litopenaeus) stylirostris isolate sty06mxc 16S ribosomal RNA, partial sequence; mitochondrial gene for mitochondrial product Length = 485 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 456 taatgcagcagttataaagg 475
>gb|AF255055.1|AF255055 Penaeus (Litopenaeus) stylirostris isolate sty2 16S ribosomal RNA, partial sequence; mitochondrial gene for mitochondrial product Length = 485 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 456 taatgcagcagttataaagg 475
>gb|AF255054.1|AF255054 Penaeus (Litopenaeus) stylirostris isolate sty1 16S ribosomal RNA, partial sequence; mitochondrial gene for mitochondrial product Length = 485 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 456 taatgcagcagttataaagg 475
>gb|AF192089.1|AF192089 Penaeus (Litopenaeus) vannamei isolate vn02lcm 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 485 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 456 taatgcagcagttataaagg 475
>gb|AF192088.1|AF192088 Penaeus (Litopenaeus) vannamei isolate vn03lcm 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 485 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 456 taatgcagcagttataaagg 475
>gb|AF192087.1|AF192087 Penaeus (Litopenaeus) vannamei isolate vn01lcm 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 485 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 456 taatgcagcagttataaagg 475
>gb|AF192086.1|AF192086 Penaeus (Litopenaeus) schmitti isolate ch147par 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 485 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 456 taatgcagcagttataaagg 475
>gb|AF192085.1|AF192085 Penaeus (Litopenaeus) schmitti isolate ch02rvv 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 485 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 456 taatgcagcagttataaagg 475
>gb|AF192084.1|AF192084 Penaeus (Litopenaeus) schmitti isolate ch01rvv 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 485 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 456 taatgcagcagttataaagg 475
>gb|AF192083.1|AF192083 Penaeus (Litopenaeus) schmitti isolate ch10for 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 485 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 456 taatgcagcagttataaagg 475
>gb|AF192082.1|AF192082 Penaeus (Litopenaeus) schmitti isolate ch09for 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 485 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 456 taatgcagcagttataaagg 475
>gb|AF192081.1|AF192081 Penaeus (Litopenaeus) schmitti isolate ch08for 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 485 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 456 taatgcagcagttataaagg 475
>gb|AF192080.1|AF192080 Penaeus (Litopenaeus) schmitti isolate ch05for 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 485 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 456 taatgcagcagttataaagg 475
>gb|AF192079.1|AF192079 Penaeus (Litopenaeus) schmitti isolate ch137par 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 485 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 456 taatgcagcagttataaagg 475
>gb|AF192078.1|AF192078 Penaeus (Litopenaeus) setiferus isolate set2 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 486 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 457 taatgcagcagttataaagg 476
>gb|AF192077.1|AF192077 Penaeus (Litopenaeus) setiferus isolate set1 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 486 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 457 taatgcagcagttataaagg 476
>gb|AF192056.1|AF192056 Penaeus (Farfantepenaeus) duorarum isolate duo2 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 485 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 456 taatgcagcagttataaagg 475
>gb|AF192055.1|AF192055 Penaeus (Farfantepenaeus) duorarum isolate duo1 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 485 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 456 taatgcagcagttataaagg 475
>gb|AF192054.1|AF192054 Penaeus (Farfantepenaeus) brasiliensis isolate br91sts 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 485 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 456 taatgcagcagttataaagg 475
>gb|AF192053.1|AF192053 Penaeus (Farfantepenaeus) brasiliensis isolate br81sts 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 485 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 456 taatgcagcagttataaagg 475
>dbj|AP006346.1| Marsupenaeus japonicus mitochondrial DNA, complete genome Length = 15968 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 12859 taatgcagcagttataaagg 12840
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 caagcagctctgttagctgt 342 |||||||||||||||||||| Sbjct: 563999 caagcagctctgttagctgt 564018
>gb|AC078941.6| Homo sapiens BAC clone RP11-180B10 from 2, complete sequence Length = 165176 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 gaaggatgattatgcaaaaa 469 |||||||||||||||||||| Sbjct: 96192 gaaggatgattatgcaaaaa 96211
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome Length = 3940880 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 496 tcttgagcttggtggcaaagatgc 519 ||||||||||||||| |||||||| Sbjct: 3859747 tcttgagcttggtggtaaagatgc 3859770
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 caagcagctctgttagctgt 342 |||||||||||||||||||| Sbjct: 565782 caagcagctctgttagctgt 565801
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 caagcagctctgttagctgt 342 |||||||||||||||||||| Sbjct: 2498320 caagcagctctgttagctgt 2498301
>gb|AF125383.1| Penaeus monodon 16S ribosomal RNA gene, mitochondrial gene for mitochondrial RNA, partial sequence Length = 896 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 702 taatgcagcagttataaagg 721
>emb|AJ880320.1| Clostridium acetobutylicum partial gapN gene for NADP-dependent non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase Length = 702 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 496 tcttgagcttggtggcaaagatgc 519 ||||||||||||||| |||||||| Sbjct: 303 tcttgagcttggtggtaaagatgc 326
>emb|CT033751.4| Mouse DNA sequence from clone RP24-236O3 on chromosome 17, complete sequence Length = 171391 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 tcctttccacaatgtgttta 227 |||||||||||||||||||| Sbjct: 2412 tcctttccacaatgtgttta 2393
>gb|U77618.1|STU77618 Salmonella typhimurium PdxB (pdxB) gene, partial cds, and Flk (flk) gene, complete cds Length = 1313 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 caagcagctctgttagctgt 342 |||||||||||||||||||| Sbjct: 493 caagcagctctgttagctgt 474
>emb|AJ297971.1|PSE297971 Penaeus setiferus mitochondrial partial 16S rRNA gene Length = 1384 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 88 taatgcagcagttataaagg 69
>emb|AJ297970.1|PST297970 Penaeus stylirostris mitochondrial partial 16S rRNA gene Length = 1380 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 87 taatgcagcagttataaagg 68
>emb|AJ132780.1|PVA132780 Penaeus vannamei 16S rRNA gene Length = 1841 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 taatgcagcagttataaagg 275 |||||||||||||||||||| Sbjct: 1641 taatgcagcagttataaagg 1660 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,153,155 Number of Sequences: 3902068 Number of extensions: 5153155 Number of successful extensions: 85570 Number of sequences better than 10.0: 101 Number of HSP's better than 10.0 without gapping: 101 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 85294 Number of HSP's gapped (non-prelim): 271 length of query: 554 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 531 effective length of database: 17,143,297,704 effective search space: 9103091080824 effective search space used: 9103091080824 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)