ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags26o13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009287.1| Triticum aestivum clone wlm0.pk0014.b1:fis, full ... 420 e-115
2gb|BT009096.1| Triticum aestivum clone wkm2c.pk005.g2:fis, full ... 335 4e-89
3ref|XM_483751.1| Oryza sativa (japonica cultivar-group), mRNA 167 2e-38
4dbj|AK102459.1| Oryza sativa (japonica cultivar-group) cDNA clon... 167 2e-38
5dbj|AB026731.1| Oryza sativa (japonica cultivar-group) mRNA for ... 167 2e-38
6gb|AY107597.1| Zea mays PCO071961 mRNA sequence 141 1e-30
7dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 105 7e-20
8dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic D... 105 7e-20
9dbj|AK071558.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 7e-17
10dbj|D85764.1| Oryza sativa (japonica cultivar-group) mRNA for cy... 96 7e-17
11gb|AY103967.1| Zea mays PCO066827 mRNA sequence 84 3e-13
12emb|AJ301553.1|MCR301553 Mesembryanthemum crystallinum mRNA for ... 74 2e-10
13dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 68 2e-08
14dbj|AP005558.3| Oryza sativa (japonica cultivar-group) genomic D... 68 2e-08
15gb|AY039786.1| Brassica rapa subsp. pekinensis monodehydroascorb... 58 1e-05
16ref|NM_115148.2| Arabidopsis thaliana disulfide oxidoreductase/ ... 50 0.004
17ref|NM_120444.2| Arabidopsis thaliana disulfide oxidoreductase/ ... 50 0.004
18gb|AY125492.1| Arabidopsis thaliana putative monodehydroascorbat... 50 0.004
19gb|AY091403.1| Arabidopsis thaliana putative monodehydroascorbat... 50 0.004
20gb|AY057576.1| Arabidopsis thaliana putative (NADH) monodehydroa... 50 0.004
21gb|AF360197.1| Arabidopsis thaliana putative (NADH) monodehydroa... 50 0.004
22gb|AY142000.1| Arabidopsis thaliana At5g03630/F17C15_50 mRNA, co... 50 0.004
23gb|AY070718.1| Arabidopsis thaliana AT3g52880/F8J2_50 mRNA, comp... 50 0.004
24gb|AY060525.1| Arabidopsis thaliana AT3g52880/F8J2_50 mRNA, comp... 50 0.004
25gb|AY057628.1| Arabidopsis thaliana AT5g03630/F17C15_50 mRNA, co... 50 0.004
26gb|AF428317.1|AF428317 Arabidopsis thaliana AT5g03630/F17C15_50 ... 50 0.004
27gb|AY045666.1| Arabidopsis thaliana AT3g52880/F8J2_50 mRNA, comp... 50 0.004
28gb|AY087318.1| Arabidopsis thaliana clone 34156 mRNA, complete s... 50 0.004
29gb|AY086968.1| Arabidopsis thaliana clone 30012 mRNA, complete s... 48 0.014
30gb|AY730589.1| Pisum sativum monodehydroascorbate reductase II m... 46 0.056
31dbj|AB125637.1| Brassica oleracea BO-MDAR 2 mRNA for monodehydro... 46 0.056
32gb|U06461.1|PSU06461 Pisum sativum monodehydroascorbate reductas... 46 0.056
33gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.22
34gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare str... 44 0.22
35dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.22
36dbj|AK060680.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.22
37emb|BX823908.1|CNS0A6NU Arabidopsis thaliana Full-length cDNA Co... 42 0.87
38ref|NM_196346.1| Oryza sativa (japonica cultivar-group) putative... 40 3.5
39gb|BT022164.1| Drosophila melanogaster IP01345 full insert cDNA 40 3.5
40emb|BX927155.1| Corynebacterium glutamicum ATCC 13032, IS finger... 40 3.5
41emb|AL132969.2|ATF8J2 Arabidopsis thaliana DNA chromosome 3, BAC... 40 3.5
42gb|AC010713.5| Drosophila melanogaster 3L BAC RP98-17E13 (Roswel... 40 3.5
43gb|AC108884.1| Oryza sativa (japonica cultivar-group) cultivar N... 40 3.5
44ref|NM_080079.2| Drosophila melanogaster senseless CG32120-RA (s... 40 3.5
45gb|BT023706.1| Drosophila melanogaster IP01347 full insert cDNA 40 3.5
46dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
47dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, compl... 40 3.5
48gb|AF212313.1|AF212313 Drosophila melanogaster senseless protein... 40 3.5
49gb|AF212312.1|AF212312 Drosophila melanogaster senseless protein... 40 3.5
50dbj|AK111949.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.5
51gb|AE003538.4| Drosophila melanogaster chromosome 3L, section 47... 40 3.5
52gb|AC121114.10| Mus musculus chromosome 15, clone RP23-63M19, co... 40 3.5
53gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 3.5 
>gb|BT009287.1| Triticum aestivum clone wlm0.pk0014.b1:fis, full insert mRNA
           sequence
          Length = 1486

 Score =  420 bits (212), Expect = e-115
 Identities = 254/266 (95%), Gaps = 3/266 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctacataggcacttgagctcagcgcagcactgtaagnatcaacaattttgatgtcaccat 60
           ||||||||| |||||||||||||||||||||| ||  ||||||||||| |||||||| ||
Sbjct: 481 ctacatagg-acttgagctcagcgcagcactgaaa--atcaacaatttcgatgtcactat 537

                                                                       
Query: 61  ggtgtacccagagccgtggtgcatgccccgtctcttcactgccggcattgctcatttcta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ggtgtacccagagccgtggtgcatgccccgtctcttcactgccggcattgctcatttcta 597

                                                                       
Query: 121 tgagggttactacgctagcaaagggatcaatatcgtgaagggtactgtggctagtggttt 180
            ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 598 cgagggttactacgctagcaaaggaatcaatatcgtgaagggtactgtggctagtggttt 657

                                                                       
Query: 181 tgatgccgatgccaatggagatgttagtgtcgngaagctgaaggatggaagagtactcga 240
           |||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 658 tgatgctgatgccaatggagatgttagtgtggtgaagctgaaggatggaagagtactcga 717

                                     
Query: 241 tgccgacatggtcatcgttggagtcg 266
           ||||||||| ||||||||||||||||
Sbjct: 718 tgccgacatcgtcatcgttggagtcg 743
to top
>gb|BT009096.1| Triticum aestivum clone wkm2c.pk005.g2:fis, full insert mRNA
           sequence
          Length = 933

 Score =  335 bits (169), Expect = 4e-89
 Identities = 189/196 (96%)
 Strand = Plus / Plus

                                                                       
Query: 71  gagccgtggtgcatgccccgtctcttcactgccggcattgctcatttctatgagggttac 130
           ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 5   gagccgtggtgcatgccacgtctcttcactgccggcattgctcatttctacgagggttac 64

                                                                       
Query: 131 tacgctagcaaagggatcaatatcgtgaagggtactgtggctagtggttttgatgccgat 190
           |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 65  tacgctagcaaaggaatcaatatcgtgaagggtactgtggctagtggttttgatgctgat 124

                                                                       
Query: 191 gccaatggagatgttagtgtcgngaagctgaaggatggaagagtactcgatgccgacatg 250
           |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| 
Sbjct: 125 gccaatggagatgttagtgtggtgaagctgaaggatggaagagtactcgatgccgacatc 184

                           
Query: 251 gtcatcgttggagtcg 266
           ||||||||||||||||
Sbjct: 185 gtcatcgttggagtcg 200
to top
>ref|XM_483751.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1721

 Score =  167 bits (84), Expect = 2e-38
 Identities = 164/191 (85%)
 Strand = Plus / Plus

                                                                       
Query: 40  caacaattttgatgtcaccatggtgtacccagagccgtggtgcatgccccgtctcttcac 99
           |||||||||||||||||| ||||||||||| || || |||||||||||||||||||||||
Sbjct: 652 caacaattttgatgtcactatggtgtaccctgaaccttggtgcatgccccgtctcttcac 711

                                                                       
Query: 100 tgccggcattgctcatttctatgagggttactacgctagcaaagggatcaatatcgtgaa 159
           | | ||| |||||  |||||| ||||| |||||||||| |||||| ||| ||||| | ||
Sbjct: 712 ttctggccttgctgctttctacgagggatactacgctaacaaaggaatccatatcataaa 771

                                                                       
Query: 160 gggtactgtggctagtggttttgatgccgatgccaatggagatgttagtgtcgngaagct 219
           ||| || ||||||  |||||||||||| ||||||||||||||||||| ||  | ||||||
Sbjct: 772 gggaaccgtggctgttggttttgatgctgatgccaatggagatgttactgcggtgaagct 831

                      
Query: 220 gaaggatggaa 230
            ||| ||||||
Sbjct: 832 aaagaatggaa 842
to top
>dbj|AK102459.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094C01, full
           insert sequence
          Length = 1720

 Score =  167 bits (84), Expect = 2e-38
 Identities = 164/191 (85%)
 Strand = Plus / Plus

                                                                       
Query: 40  caacaattttgatgtcaccatggtgtacccagagccgtggtgcatgccccgtctcttcac 99
           |||||||||||||||||| ||||||||||| || || |||||||||||||||||||||||
Sbjct: 652 caacaattttgatgtcactatggtgtaccctgaaccttggtgcatgccccgtctcttcac 711

                                                                       
Query: 100 tgccggcattgctcatttctatgagggttactacgctagcaaagggatcaatatcgtgaa 159
           | | ||| |||||  |||||| ||||| |||||||||| |||||| ||| ||||| | ||
Sbjct: 712 ttctggccttgctgctttctacgagggatactacgctaacaaaggaatccatatcataaa 771

                                                                       
Query: 160 gggtactgtggctagtggttttgatgccgatgccaatggagatgttagtgtcgngaagct 219
           ||| || ||||||  |||||||||||| ||||||||||||||||||| ||  | ||||||
Sbjct: 772 gggaaccgtggctgttggttttgatgctgatgccaatggagatgttactgcggtgaagct 831

                      
Query: 220 gaaggatggaa 230
            ||| ||||||
Sbjct: 832 aaagaatggaa 842
to top
>dbj|AB026731.1| Oryza sativa (japonica cultivar-group) mRNA for
           monodehydroascorbate reductase, partial cds
          Length = 1339

 Score =  167 bits (84), Expect = 2e-38
 Identities = 164/191 (85%)
 Strand = Plus / Plus

                                                                       
Query: 40  caacaattttgatgtcaccatggtgtacccagagccgtggtgcatgccccgtctcttcac 99
           |||||||||||||||||| ||||||||||| || || |||||||||||||||||||||||
Sbjct: 700 caacaattttgatgtcactatggtgtaccctgaaccttggtgcatgccccgtctcttcac 759

                                                                       
Query: 100 tgccggcattgctcatttctatgagggttactacgctagcaaagggatcaatatcgtgaa 159
           | | ||| |||||  |||||| ||||| |||||||||| |||||| ||| ||||| | ||
Sbjct: 760 ttctggccttgctgctttctacgagggatactacgctaacaaaggaatccatatcataaa 819

                                                                       
Query: 160 gggtactgtggctagtggttttgatgccgatgccaatggagatgttagtgtcgngaagct 219
           ||| || ||||||  |||||||||||| ||||||||||||||||||| ||  | ||||||
Sbjct: 820 gggaaccgtggctgttggttttgatgctgatgccaatggagatgttactgcggtgaagct 879

                      
Query: 220 gaaggatggaa 230
            ||| ||||||
Sbjct: 880 aaagaatggaa 890
to top
>gb|AY107597.1| Zea mays PCO071961 mRNA sequence
          Length = 1745

 Score =  141 bits (71), Expect = 1e-30
 Identities = 143/167 (85%)
 Strand = Plus / Plus

                                                                       
Query: 38  atcaacaattttgatgtcaccatggtgtacccagagccgtggtgcatgccccgtctcttc 97
           |||||||| || ||||| |||||||||||||| || ||||||||||||||||||||||||
Sbjct: 760 atcaacaacttcgatgtgaccatggtgtaccctgaaccgtggtgcatgccccgtctcttc 819

                                                                       
Query: 98  actgccggcattgctcatttctatgagggttactacgctagcaaagggatcaatatcgtg 157
           ||||| || |||||||||||||||||||| ||||| |||| |||||| |||||  | || 
Sbjct: 820 actgctggtattgctcatttctatgagggctactatgctaacaaaggaatcaaggttgta 879

                                                          
Query: 158 aagggtactgtggctagtggttttgatgccgatgccaatggagatgt 204
           ||||| || || |||  |||||| || || |||||||| ||||||||
Sbjct: 880 aagggcacggttgctgttggtttcgacgctgatgccaacggagatgt 926
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  105 bits (53), Expect = 7e-20
 Identities = 104/121 (85%)
 Strand = Plus / Plus

                                                                            
Query: 84       tgccccgtctcttcactgccggcattgctcatttctatgagggttactacgctagcaaag 143
                ||||||||||||||||| | ||| |||||  |||||| ||||| |||||||||| |||||
Sbjct: 27894475 tgccccgtctcttcacttctggccttgctgctttctacgagggatactacgctaacaaag 27894534

                                                                            
Query: 144      ggatcaatatcgtgaagggtactgtggctagtggttttgatgccgatgccaatggagatg 203
                | ||| ||||| | ||||| || ||||||  |||||||||||| ||||||||||||||||
Sbjct: 27894535 gaatccatatcataaagggaaccgtggctgttggttttgatgctgatgccaatggagatg 27894594

                 
Query: 204      t 204
                |
Sbjct: 27894595 t 27894595



 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                            
Query: 40       caacaattttgatgtcaccatggtgtacccagagccgtggtgca 83
                |||||||||||||||||| ||||||||||| || || |||||||
Sbjct: 27894278 caacaattttgatgtcactatggtgtaccctgaaccttggtgca 27894321
to top
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1150_A11
          Length = 142010

 Score =  105 bits (53), Expect = 7e-20
 Identities = 104/121 (85%)
 Strand = Plus / Plus

                                                                          
Query: 84     tgccccgtctcttcactgccggcattgctcatttctatgagggttactacgctagcaaag 143
              ||||||||||||||||| | ||| |||||  |||||| ||||| |||||||||| |||||
Sbjct: 102553 tgccccgtctcttcacttctggccttgctgctttctacgagggatactacgctaacaaag 102612

                                                                          
Query: 144    ggatcaatatcgtgaagggtactgtggctagtggttttgatgccgatgccaatggagatg 203
              | ||| ||||| | ||||| || ||||||  |||||||||||| ||||||||||||||||
Sbjct: 102613 gaatccatatcataaagggaaccgtggctgttggttttgatgctgatgccaatggagatg 102672

               
Query: 204    t 204
              |
Sbjct: 102673 t 102673



 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                          
Query: 40     caacaattttgatgtcaccatggtgtacccagagccgtggtgca 83
              |||||||||||||||||| ||||||||||| || || |||||||
Sbjct: 102356 caacaattttgatgtcactatggtgtaccctgaaccttggtgca 102399
to top
>dbj|AK071558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100J06, full
           insert sequence
          Length = 1668

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 132/160 (82%)
 Strand = Plus / Plus

                                                                       
Query: 45  attttgatgtcaccatggtgtacccagagccgtggtgcatgccccgtctcttcactgccg 104
           ||||||||||||| |||||||  || || || ||||||||||| |||||||||||||| |
Sbjct: 779 attttgatgtcacgatggtgtttcctgaaccttggtgcatgcctcgtctcttcactgctg 838

                                                                       
Query: 105 gcattgctcatttctatgagggttactacgctagcaaagggatcaatatcgtgaagggta 164
             || ||   |||||||||| |||||||| ||| ||||||  | || |||||||||||||
Sbjct: 839 atatcgcggctttctatgagagttactacactaacaaaggagttaagatcgtgaagggta 898

                                                   
Query: 165 ctgtggctagtggttttgatgccgatgccaatggagatgt 204
           | || |||  |||||||||||| ||||| ||||| |||||
Sbjct: 899 cagtagctgttggttttgatgctgatgctaatggtgatgt 938
to top
>dbj|D85764.1| Oryza sativa (japonica cultivar-group) mRNA for cytosolic
           monodehydroascorbate reductase, complete cds
          Length = 1570

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 132/160 (82%)
 Strand = Plus / Plus

                                                                       
Query: 45  attttgatgtcaccatggtgtacccagagccgtggtgcatgccccgtctcttcactgccg 104
           ||||||||||||| |||||||  || || || ||||||||||| |||||||||||||| |
Sbjct: 657 attttgatgtcacgatggtgtttcctgaaccttggtgcatgcctcgtctcttcactgctg 716

                                                                       
Query: 105 gcattgctcatttctatgagggttactacgctagcaaagggatcaatatcgtgaagggta 164
             || ||   |||||||||| |||||||| ||| ||||||  | || |||||||||||||
Sbjct: 717 atatcgcggctttctatgagagttactacactaacaaaggagttaagatcgtgaagggta 776

                                                   
Query: 165 ctgtggctagtggttttgatgccgatgccaatggagatgt 204
           | || |||  |||||||||||| ||||| ||||| |||||
Sbjct: 777 cagtagctgttggttttgatgctgatgctaatggtgatgt 816
to top
>gb|AY103967.1| Zea mays PCO066827 mRNA sequence
          Length = 1675

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 129/158 (81%)
 Strand = Plus / Plus

                                                                       
Query: 47  tttgatgtcaccatggtgtacccagagccgtggtgcatgccccgtctcttcactgccggc 106
           ||||||||||| |||||||  || || || ||||||||||| || |||||||||||||  
Sbjct: 695 tttgatgtcactatggtgtttcctgaaccttggtgcatgcctcgcctcttcactgccgat 754

                                                                       
Query: 107 attgctcatttctatgagggttactacgctagcaaagggatcaatatcgtgaagggtact 166
           ||||||  ||||||||||| ||||||  ||| ||||||  | || ||| ||||||| || 
Sbjct: 755 attgctgctttctatgaggcttactatactaacaaaggtgtaaagatcttgaagggcacg 814

                                                 
Query: 167 gtggctagtggttttgatgccgatgccaatggagatgt 204
            | |||  |||||||||||| ||||||||||| |||||
Sbjct: 815 ctagctgttggttttgatgctgatgccaatggtgatgt 852
to top
>emb|AJ301553.1|MCR301553 Mesembryanthemum crystallinum mRNA for monodehydroascorbate
           reductase (mdhar1 gene)
          Length = 1592

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                       
Query: 45  attttgatgtcaccatggtgtacccagagccgtggtgcatgccccgtctcttcactgccg 104
           |||| |||||||| ||||| ||||||||||| ||||||||||| || ||||||||||| |
Sbjct: 706 atttggatgtcactatggtttacccagagccctggtgcatgccacgactcttcactgctg 765

                                        
Query: 105 gcattgctcatttctatgagggttactac 133
             || ||  | ||||||||||||||||||
Sbjct: 766 atatagcaaagttctatgagggttactac 794
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 76/90 (84%)
 Strand = Plus / Plus

                                                                            
Query: 115      tttctatgagggttactacgctagcaaagggatcaatatcgtgaagggtactgtggctag 174
                |||||||||| |||||||| ||| ||||||  | || |||||||||||||| || |||  
Sbjct: 22345538 tttctatgagagttactacactaacaaaggagttaagatcgtgaagggtacagtagctgt 22345597

                                              
Query: 175      tggttttgatgccgatgccaatggagatgt 204
                |||||||||||| ||||| ||||| |||||
Sbjct: 22345598 tggttttgatgctgatgctaatggtgatgt 22345627
to top
>dbj|AP005558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1155_H10
          Length = 140475

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 76/90 (84%)
 Strand = Plus / Plus

                                                                          
Query: 115    tttctatgagggttactacgctagcaaagggatcaatatcgtgaagggtactgtggctag 174
              |||||||||| |||||||| ||| ||||||  | || |||||||||||||| || |||  
Sbjct: 107546 tttctatgagagttactacactaacaaaggagttaagatcgtgaagggtacagtagctgt 107605

                                            
Query: 175    tggttttgatgccgatgccaatggagatgt 204
              |||||||||||| ||||| ||||| |||||
Sbjct: 107606 tggttttgatgctgatgctaatggtgatgt 107635
to top
>gb|AY039786.1| Brassica rapa subsp. pekinensis monodehydroascorbate reductase
           mRNA, complete cds
          Length = 1564

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 67/80 (83%)
 Strand = Plus / Plus

                                                                       
Query: 33  taagnatcaacaattttgatgtcaccatggtgtacccagagccgtggtgcatgccccgtc 92
           |||| |||||||||||||||||||| ||||| | ||| || || |||||||||||  | |
Sbjct: 580 taaggatcaacaattttgatgtcactatggttttccctgaaccctggtgcatgcctaggc 639

                               
Query: 93  tcttcactgccggcattgct 112
           | ||||| |||| |||||||
Sbjct: 640 ttttcaccgccgacattgct 659
to top
>ref|NM_115148.2| Arabidopsis thaliana disulfide oxidoreductase/ oxidoreductase
           AT3G52880 mRNA, complete cds
          Length = 1657

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                       
Query: 33  taagnatcaacaattttgatgtcaccatggtgtacccagagccgtggtgcatgccccgtc 92
           |||| ||||||||||| |||||||| ||||| | ||| || || |||||||||||  | |
Sbjct: 632 taaggatcaacaatttagatgtcactatggttttccctgaaccttggtgcatgcctaggc 691

                                           
Query: 93  tcttcactgccggcattgctcatttctatgag 124
           | ||||| ||||  ||||||  ||||||||||
Sbjct: 692 ttttcaccgccgatattgctgctttctatgag 723
to top
>ref|NM_120444.2| Arabidopsis thaliana disulfide oxidoreductase/ oxidoreductase
           AT5G03630 mRNA, complete cds
          Length = 1581

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 56  accatggtgtacccagagccgtggtgcatgccccgtctcttcactgccggcattgctcat 115
           |||||||| || ||||| || ||||||||||| || || ||||| || |||||||||   
Sbjct: 632 accatggtttatccagaaccttggtgcatgcctcggcttttcaccgctggcattgcttcc 691

                            
Query: 116 ttctatgagggttacta 132
           ||||| |||||||||||
Sbjct: 692 ttctacgagggttacta 708
to top
>gb|AY125492.1| Arabidopsis thaliana putative monodehydroascorbate reductase
           protein (At3g52880) mRNA, complete cds
          Length = 1557

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                       
Query: 33  taagnatcaacaattttgatgtcaccatggtgtacccagagccgtggtgcatgccccgtc 92
           |||| ||||||||||| |||||||| ||||| | ||| || || |||||||||||  | |
Sbjct: 597 taaggatcaacaatttagatgtcactatggttttccctgaaccttggtgcatgcctaggc 656

                                           
Query: 93  tcttcactgccggcattgctcatttctatgag 124
           | ||||| ||||  ||||||  ||||||||||
Sbjct: 657 ttttcaccgccgatattgctgctttctatgag 688
to top
>gb|AY091403.1| Arabidopsis thaliana putative monodehydroascorbate reductase
           (At3g52880) mRNA, complete cds
          Length = 1336

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                       
Query: 33  taagnatcaacaattttgatgtcaccatggtgtacccagagccgtggtgcatgccccgtc 92
           |||| ||||||||||| |||||||| ||||| | ||| || || |||||||||||  | |
Sbjct: 545 taaggatcaacaatttagatgtcactatggttttccctgaaccttggtgcatgcctaggc 604

                                           
Query: 93  tcttcactgccggcattgctcatttctatgag 124
           | ||||| ||||  ||||||  ||||||||||
Sbjct: 605 ttttcaccgccgatattgctgctttctatgag 636
to top
>gb|AY057576.1| Arabidopsis thaliana putative (NADH) monodehydroascorbate reductase
           (At3g52880) mRNA, complete cds
          Length = 1551

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                       
Query: 33  taagnatcaacaattttgatgtcaccatggtgtacccagagccgtggtgcatgccccgtc 92
           |||| ||||||||||| |||||||| ||||| | ||| || || |||||||||||  | |
Sbjct: 627 taaggatcaacaatttagatgtcactatggttttccctgaaccttggtgcatgcctaggc 686

                                           
Query: 93  tcttcactgccggcattgctcatttctatgag 124
           | ||||| ||||  ||||||  ||||||||||
Sbjct: 687 ttttcaccgccgatattgctgctttctatgag 718
to top
>gb|AF360197.1| Arabidopsis thaliana putative (NADH) monodehydroascorbate reductase
           (At3g52880) mRNA, complete cds
          Length = 1527

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                       
Query: 33  taagnatcaacaattttgatgtcaccatggtgtacccagagccgtggtgcatgccccgtc 92
           |||| ||||||||||| |||||||| ||||| | ||| || || |||||||||||  | |
Sbjct: 571 taaggatcaacaatttagatgtcactatggttttccctgaaccttggtgcatgcctaggc 630

                                           
Query: 93  tcttcactgccggcattgctcatttctatgag 124
           | ||||| ||||  ||||||  ||||||||||
Sbjct: 631 ttttcaccgccgatattgctgctttctatgag 662
to top
>gb|AY142000.1| Arabidopsis thaliana At5g03630/F17C15_50 mRNA, complete cds
          Length = 1308

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 56  accatggtgtacccagagccgtggtgcatgccccgtctcttcactgccggcattgctcat 115
           |||||||| || ||||| || ||||||||||| || || ||||| || |||||||||   
Sbjct: 571 accatggtttatccagaaccttggtgcatgcctcggcttttcaccgctggcattgcttcc 630

                            
Query: 116 ttctatgagggttacta 132
           ||||| |||||||||||
Sbjct: 631 ttctacgagggttacta 647
to top
>gb|AY070718.1| Arabidopsis thaliana AT3g52880/F8J2_50 mRNA, complete cds
          Length = 1642

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                       
Query: 33  taagnatcaacaattttgatgtcaccatggtgtacccagagccgtggtgcatgccccgtc 92
           |||| ||||||||||| |||||||| ||||| | ||| || || |||||||||||  | |
Sbjct: 618 taaggatcaacaatttagatgtcactatggttttccctgaaccttggtgcatgcctaggc 677

                                           
Query: 93  tcttcactgccggcattgctcatttctatgag 124
           | ||||| ||||  ||||||  ||||||||||
Sbjct: 678 ttttcaccgccgatattgctgctttctatgag 709
to top
>gb|AY060525.1| Arabidopsis thaliana AT3g52880/F8J2_50 mRNA, complete cds
          Length = 1305

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                       
Query: 33  taagnatcaacaattttgatgtcaccatggtgtacccagagccgtggtgcatgccccgtc 92
           |||| ||||||||||| |||||||| ||||| | ||| || || |||||||||||  | |
Sbjct: 545 taaggatcaacaatttagatgtcactatggttttccctgaaccttggtgcatgcctaggc 604

                                           
Query: 93  tcttcactgccggcattgctcatttctatgag 124
           | ||||| ||||  ||||||  ||||||||||
Sbjct: 605 ttttcaccgccgatattgctgctttctatgag 636
to top
>gb|AY057628.1| Arabidopsis thaliana AT5g03630/F17C15_50 mRNA, complete cds
          Length = 1577

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 56  accatggtgtacccagagccgtggtgcatgccccgtctcttcactgccggcattgctcat 115
           |||||||| || ||||| || ||||||||||| || || ||||| || |||||||||   
Sbjct: 623 accatggtttatccagaaccttggtgcatgcctcggcttttcaccgctggcattgcttcc 682

                            
Query: 116 ttctatgagggttacta 132
           ||||| |||||||||||
Sbjct: 683 ttctacgagggttacta 699
to top
>gb|AF428317.1|AF428317 Arabidopsis thaliana AT5g03630/F17C15_50 mRNA, complete cds
          Length = 1526

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 56  accatggtgtacccagagccgtggtgcatgccccgtctcttcactgccggcattgctcat 115
           |||||||| || ||||| || ||||||||||| || || ||||| || |||||||||   
Sbjct: 620 accatggtttatccagaaccttggtgcatgcctcggcttttcaccgctggcattgcttcc 679

                            
Query: 116 ttctatgagggttacta 132
           ||||| |||||||||||
Sbjct: 680 ttctacgagggttacta 696
to top
>gb|AY045666.1| Arabidopsis thaliana AT3g52880/F8J2_50 mRNA, complete cds
          Length = 1546

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                       
Query: 33  taagnatcaacaattttgatgtcaccatggtgtacccagagccgtggtgcatgccccgtc 92
           |||| ||||||||||| |||||||| ||||| | ||| || || |||||||||||  | |
Sbjct: 599 taaggatcaacaatttagatgtcactatggttttccctgaaccttggtgcatgcctaggc 658

                                           
Query: 93  tcttcactgccggcattgctcatttctatgag 124
           | ||||| ||||  ||||||  ||||||||||
Sbjct: 659 ttttcaccgccgatattgctgctttctatgag 690
to top
>gb|AY087318.1| Arabidopsis thaliana clone 34156 mRNA, complete sequence
          Length = 1538

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 56  accatggtgtacccagagccgtggtgcatgccccgtctcttcactgccggcattgctcat 115
           |||||||| || ||||| || ||||||||||| || || ||||| || |||||||||   
Sbjct: 633 accatggtttatccagaaccttggtgcatgcctcggcttttcaccgctggcattgcttcc 692

                            
Query: 116 ttctatgagggttacta 132
           ||||| |||||||||||
Sbjct: 693 ttctacgagggttacta 709
to top
>gb|AY086968.1| Arabidopsis thaliana clone 30012 mRNA, complete sequence
          Length = 1575

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                  
Query: 33  taagnatcaacaattttgatgtcaccatggtgtacccagagccgtggtgcatgcc 87
           |||| ||||||||||| |||||||| ||||| | ||| || || |||||||||||
Sbjct: 632 taaggatcaacaatttagatgtcactatggttttccctgaaccttggtgcatgcc 686
to top
>gb|AY730589.1| Pisum sativum monodehydroascorbate reductase II mRNA, partial cds
          Length = 763

 Score = 46.1 bits (23), Expect = 0.056
 Identities = 86/107 (80%)
 Strand = Plus / Plus

                                                                       
Query: 48  ttgatgtcaccatggtgtacccagagccgtggtgcatgccccgtctcttcactgccggca 107
           ||||||| |||||||| |||||||| || ||||| ||||| || || || ||| | |  |
Sbjct: 571 ttgatgttaccatggtctacccagaaccttggtgtatgccacgactttttacttctgaaa 630

                                                          
Query: 108 ttgctcatttctatgagggttactacgctagcaaagggatcaatatc 154
           |||||  |||||||||||| || || || |  |||||||||||||||
Sbjct: 631 ttgctgctttctatgagggatattatgccaataaagggatcaatatc 677
to top
>dbj|AB125637.1| Brassica oleracea BO-MDAR 2 mRNA for monodehydroascorbate
           reductase, complete cds
          Length = 1543

 Score = 46.1 bits (23), Expect = 0.056
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 38  atcaacaattttgatgtcaccatggtgtacccagagccgtggtgcatgccc 88
           |||||| ||||||||||||| ||||| | ||| || || ||||||||||||
Sbjct: 600 atcaacgattttgatgtcactatggttttccctgaaccttggtgcatgccc 650
to top
>gb|U06461.1|PSU06461 Pisum sativum monodehydroascorbate reductase mRNA, complete cds
          Length = 1536

 Score = 46.1 bits (23), Expect = 0.056
 Identities = 86/107 (80%)
 Strand = Plus / Plus

                                                                       
Query: 48  ttgatgtcaccatggtgtacccagagccgtggtgcatgccccgtctcttcactgccggca 107
           ||||||| |||||||| |||||||| || ||||| ||||| || || || ||| | |  |
Sbjct: 600 ttgatgttaccatggtctacccagaaccttggtgtatgccacgactttttacttctgaaa 659

                                                          
Query: 108 ttgctcatttctatgagggttactacgctagcaaagggatcaatatc 154
           |||||  |||||||||||| || || || |  |||||||||||||||
Sbjct: 660 ttgctgctttctatgagggatattatgccaataaagggatcaatatc 706
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 177      gttttgatgccgatgccaatggagat 202
                ||||||||||||||| ||||||||||
Sbjct: 10180982 gttttgatgccgatgacaatggagat 10180957
to top
>gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0045E22, from chromosome 3, complete sequence
          Length = 160920

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 177   gttttgatgccgatgccaatggagat 202
             ||||||||||||||| ||||||||||
Sbjct: 42395 gttttgatgccgatgacaatggagat 42370
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 177      gttttgatgccgatgccaatggagat 202
                ||||||||||||||| ||||||||||
Sbjct: 10179083 gttttgatgccgatgacaatggagat 10179058
to top
>dbj|AK060680.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C12, full
           insert sequence
          Length = 963

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 177 gttttgatgccgatgccaatggagat 202
           ||||||||||||||| ||||||||||
Sbjct: 35  gttttgatgccgatgacaatggagat 10
to top
>emb|BX823908.1|CNS0A6NU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS90ZG06 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1480

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 38  atcaacaattttgatgtcaccatggtgtacccagagccgtggtgcatgc 86
           ||||||||||| |||||||| ||||| | ||| || || ||||||||||
Sbjct: 579 atcaacaatttagatgtcactatggttttccctgaaccttggtgcatgc 627
to top
>ref|NM_196346.1| Oryza sativa (japonica cultivar-group) putative Cell elongation
            protein DIMINUTO (Cell elongation protein Dwarf1)
            (OSJNBb0058B20.18), mRNA
          Length = 1686

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 56   accatggtgtacccagagcc 75
            ||||||||||||||||||||
Sbjct: 1294 accatggtgtacccagagcc 1313
to top
>gb|BT022164.1| Drosophila melanogaster IP01345 full insert cDNA
          Length = 2461

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 60  tggtgtacccagagccgtgg 79
           ||||||||||||||||||||
Sbjct: 462 tggtgtacccagagccgtgg 443
to top
>emb|BX927155.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete
              genome; segment 8/10
          Length = 349136

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 237    tcgatgccgacatggtcatcgttg 260
              ||||||||| ||||||||||||||
Sbjct: 347394 tcgatgccgtcatggtcatcgttg 347417
to top
>emb|AL132969.2|ATF8J2 Arabidopsis thaliana DNA chromosome 3, BAC clone F8J2
          Length = 99814

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                            
Query: 33    taagnatcaacaattttgatgtcaccatggt 63
             |||| ||||||||||| |||||||| |||||
Sbjct: 26141 taaggatcaacaatttagatgtcactatggt 26111
to top
>gb|AC010713.5| Drosophila melanogaster 3L BAC RP98-17E13 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 173714

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    tggtgtacccagagccgtgg 79
             ||||||||||||||||||||
Sbjct: 29331 tggtgtacccagagccgtgg 29350
to top
>gb|AC108884.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone
             OSJNBb0058B20 from chromosome 10, complete sequence
          Length = 156232

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    accatggtgtacccagagcc 75
             ||||||||||||||||||||
Sbjct: 75827 accatggtgtacccagagcc 75846
to top
>ref|NM_080079.2| Drosophila melanogaster senseless CG32120-RA (sens), mRNA
          Length = 2450

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 60  tggtgtacccagagccgtgg 79
           ||||||||||||||||||||
Sbjct: 470 tggtgtacccagagccgtgg 451
to top
>gb|BT023706.1| Drosophila melanogaster IP01347 full insert cDNA
          Length = 2462

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 60  tggtgtacccagagccgtgg 79
           ||||||||||||||||||||
Sbjct: 462 tggtgtacccagagccgtgg 443
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 56       accatggtgtacccagagcc 75
                ||||||||||||||||||||
Sbjct: 12845023 accatggtgtacccagagcc 12845004
to top
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome
          Length = 3309401

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 237     tcgatgccgacatggtcatcgttg 260
               ||||||||| ||||||||||||||
Sbjct: 2818586 tcgatgccgtcatggtcatcgttg 2818609
to top
>gb|AF212313.1|AF212313 Drosophila melanogaster senseless protein (sens) gene, complete cds
          Length = 8733

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 60   tggtgtacccagagccgtgg 79
            ||||||||||||||||||||
Sbjct: 2068 tggtgtacccagagccgtgg 2049
to top
>gb|AF212312.1|AF212312 Drosophila melanogaster senseless protein (sens) mRNA, complete cds
          Length = 2496

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 60  tggtgtacccagagccgtgg 79
           ||||||||||||||||||||
Sbjct: 471 tggtgtacccagagccgtgg 452
to top
>dbj|AK111949.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-C04, full
           insert sequence
          Length = 1124

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 56  accatggtgtacccagagcc 75
           ||||||||||||||||||||
Sbjct: 429 accatggtgtacccagagcc 448
to top
>gb|AE003538.4| Drosophila melanogaster chromosome 3L, section 47 of 83 of the complete
              sequence
          Length = 303314

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     tggtgtacccagagccgtgg 79
              ||||||||||||||||||||
Sbjct: 254543 tggtgtacccagagccgtgg 254562
to top
>gb|AC121114.10| Mus musculus chromosome 15, clone RP23-63M19, complete sequence
          Length = 337658

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   gggtactgtggctagtggtt 179
             ||||||||||||||||||||
Sbjct: 85749 gggtactgtggctagtggtt 85768
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 56       accatggtgtacccagagcc 75
                ||||||||||||||||||||
Sbjct: 12852363 accatggtgtacccagagcc 12852344


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,823,165
Number of Sequences: 3902068
Number of extensions: 1823165
Number of successful extensions: 37739
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 37605
Number of HSP's gapped (non-prelim): 133
length of query: 266
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 244
effective length of database: 17,147,199,772
effective search space: 4183916744368
effective search space used: 4183916744368
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top