| Clone Name | bags26o06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009299.1| Triticum aestivum clone wlm1.pk0008.c11:fis, full insert mRNA sequence Length = 1344 Score = 1035 bits (522), Expect = 0.0 Identities = 558/570 (97%) Strand = Plus / Plus Query: 1 attacccttcagtgaagggcgcaaaagttgtgactgacaagatgacaatgcgttcaaagg 60 ||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 242 attacccttcagtaaagggcgcaaaggttgtcactgacaagatgacaatgcgttcaaagg 301 Query: 61 gttatgggtttgtcaagtttggtgatcccacagagcaagctcgtgccatgactgagatga 120 ||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 302 gttatgggtttgtgaagtttggtgatcctacagagcaagctcgtgccatgactgaaatga 361 Query: 121 atggaatgccctgttcttccagacctatgcgcattggtccagcagcaaataggaagacaa 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 362 atggaatgccctgttcttccagacctatgcgcattggcccagcagcaaataggaagacaa 421 Query: 181 caggggttcaggagagagtaccaattccaaatacaaatactcaaggagctcagtctgaca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 caggggttcaggagagagtaccaattccaaatacaaatactcaaggagctcagtctgaca 481 Query: 241 atgatcctaacaataccaccatatttgttggcggccttgaccccaatgtcactgaagatg 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 482 atgatcctaacaataccaccatatttgttggtggccttgaccccaatgtcactgaagatg 541 Query: 301 ccttgaaacaagtgtttgctccatatggggaagtcgtccatgtcaagatccctgttggga 360 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 542 ccttgaaacaagtgtttgctccatatggggaagttgtccatgtcaagatccctgttggga 601 Query: 361 agagatgtggctttgttcagtatgctaacaggccttctgctgagcaagctctgcaattgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 602 agagatgtggctttgttcagtatgctaacaggccttctgctgagcaagctctgcaattgc 661 Query: 421 tgcaagggaccttggttggtggtcagaacgtgaggctttcatggggacgaagcccttcga 480 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 662 tgcaagggaccttggttggtggtcagaatgtgaggctttcatggggacgaagcccttcaa 721 Query: 481 acaaacaaactcagcctcaggaagccacccagtggggtgcaggtgctgctgccggtgctg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 722 acaaacaaactcagcctcaggaagccacccagtggggtgcaggtgctgctgctggtgctg 781 Query: 541 ctggtggttactatgctggatatggacaag 570 |||||||||||||||||||||||||||||| Sbjct: 782 ctggtggttactatgctggatatggacaag 811
>ref|XM_473964.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1245 Score = 289 bits (146), Expect = 5e-75 Identities = 242/274 (88%) Strand = Plus / Plus Query: 214 caaatactcaaggagctcagtctgacaatgatcctaacaataccaccatatttgttggcg 273 ||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 776 caaatgctcaaggagctcagtctgagaatgatcctaacaataccaccatattcgttggtg 835 Query: 274 gccttgaccccaatgtcactgaagatgccttgaaacaagtgtttgctccatatggggaag 333 | ||||||||||| ||||||||||||| |||||||||||| || ||||| ||||| |||| Sbjct: 836 gtcttgaccccaacgtcactgaagatgtcttgaaacaagttttcgctccttatggagaag 895 Query: 334 tcgtccatgtcaagatccctgttgggaagagatgtggctttgttcagtatgctaacaggc 393 | |||||||| ||||| ||||||||||| |||||||| |||||||| |||| |||||||| Sbjct: 896 ttgtccatgttaagattcctgttgggaaaagatgtggttttgttcaatatgttaacaggc 955 Query: 394 cttctgctgagcaagctctgcaattgctgcaagggaccttggttggtggtcagaacgtga 453 |||||||||||||||| ||| | |||| |||||||||||| ||||||| ||||| || | Sbjct: 956 cttctgctgagcaagcactggcagtgctacaagggaccttgattggtgggcagaatgtta 1015 Query: 454 ggctttcatggggacgaagcccttcgaacaaaca 487 | ||||| ||||| ||||||| ||| |||||||| Sbjct: 1016 gactttcgtggggtcgaagcctttcaaacaaaca 1049 Score = 262 bits (132), Expect = 1e-66 Identities = 186/204 (91%) Strand = Plus / Plus Query: 1 attacccttcagtgaagggcgcaaaagttgtgactgacaagatgacaatgcgttcaaagg 60 |||||||||| || ||||| ||||||||||| |||||||| ||||||||||||||||||| Sbjct: 575 attacccttcggttaagggtgcaaaagttgtaactgacaaaatgacaatgcgttcaaagg 634 Query: 61 gttatgggtttgtcaagtttggtgatcccacagagcaagctcgtgccatgactgagatga 120 ||||||||||||| || ||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 635 gttatgggtttgtgaaatttggtgatcctacagagcaagctcgtgcaatgactgaaatga 694 Query: 121 atggaatgccctgttcttccagacctatgcgcattggtccagcagcaaataggaagacaa 180 ||||||||| || ||||||||||| ||||| ||||||||||| ||||||| ||| |||| Sbjct: 695 atggaatgctttgctcttccagaccgatgcgtattggtccagcggcaaataagaaaacaa 754 Query: 181 caggggttcaggagagagtaccaa 204 |||||||||||||||||||||||| Sbjct: 755 caggggttcaggagagagtaccaa 778 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 539 tgctggtggttactatgctggatatggacaag 570 ||||||||||||||||| ||| |||||||||| Sbjct: 1089 tgctggtggttactatggtggctatggacaag 1120
>dbj|AK120834.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019P13, full insert sequence Length = 1599 Score = 289 bits (146), Expect = 5e-75 Identities = 242/274 (88%) Strand = Plus / Plus Query: 214 caaatactcaaggagctcagtctgacaatgatcctaacaataccaccatatttgttggcg 273 ||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 870 caaatgctcaaggagctcagtctgagaatgatcctaacaataccaccatattcgttggtg 929 Query: 274 gccttgaccccaatgtcactgaagatgccttgaaacaagtgtttgctccatatggggaag 333 | ||||||||||| ||||||||||||| |||||||||||| || ||||| ||||| |||| Sbjct: 930 gtcttgaccccaacgtcactgaagatgtcttgaaacaagttttcgctccttatggagaag 989 Query: 334 tcgtccatgtcaagatccctgttgggaagagatgtggctttgttcagtatgctaacaggc 393 | |||||||| ||||| ||||||||||| |||||||| |||||||| |||| |||||||| Sbjct: 990 ttgtccatgttaagattcctgttgggaaaagatgtggttttgttcaatatgttaacaggc 1049 Query: 394 cttctgctgagcaagctctgcaattgctgcaagggaccttggttggtggtcagaacgtga 453 |||||||||||||||| ||| | |||| |||||||||||| ||||||| ||||| || | Sbjct: 1050 cttctgctgagcaagcactggcagtgctacaagggaccttgattggtgggcagaatgtta 1109 Query: 454 ggctttcatggggacgaagcccttcgaacaaaca 487 | ||||| ||||| ||||||| ||| |||||||| Sbjct: 1110 gactttcgtggggtcgaagcctttcaaacaaaca 1143 Score = 262 bits (132), Expect = 1e-66 Identities = 186/204 (91%) Strand = Plus / Plus Query: 1 attacccttcagtgaagggcgcaaaagttgtgactgacaagatgacaatgcgttcaaagg 60 |||||||||| || ||||| ||||||||||| |||||||| ||||||||||||||||||| Sbjct: 669 attacccttcggttaagggtgcaaaagttgtaactgacaaaatgacaatgcgttcaaagg 728 Query: 61 gttatgggtttgtcaagtttggtgatcccacagagcaagctcgtgccatgactgagatga 120 ||||||||||||| || ||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 729 gttatgggtttgtgaaatttggtgatcctacagagcaagctcgtgcaatgactgaaatga 788 Query: 121 atggaatgccctgttcttccagacctatgcgcattggtccagcagcaaataggaagacaa 180 ||||||||| || ||||||||||| ||||| ||||||||||| ||||||| ||| |||| Sbjct: 789 atggaatgctttgctcttccagaccgatgcgtattggtccagcggcaaataagaaaacaa 848 Query: 181 caggggttcaggagagagtaccaa 204 |||||||||||||||||||||||| Sbjct: 849 caggggttcaggagagagtaccaa 872 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 539 tgctggtggttactatgctggatatggacaag 570 ||||||||||||||||| ||| |||||||||| Sbjct: 1183 tgctggtggttactatggtggctatggacaag 1214
>gb|BT018319.1| Zea mays clone EL01T0208A09.c mRNA sequence Length = 1019 Score = 260 bits (131), Expect = 4e-66 Identities = 248/287 (86%) Strand = Plus / Plus Query: 214 caaatactcaaggagctcagtctgacaatgatcctaacaataccaccatatttgttggcg 273 ||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||| | Sbjct: 227 caaattctcaaggagctcagtctgagaatgatcctaacaataccactatatttgttggtg 286 Query: 274 gccttgaccccaatgtcactgaagatgccttgaaacaagtgtttgctccatatggggaag 333 | |||||||||||||||||||||||| || | |||||||| ||| |||| || || |||| Sbjct: 287 ggcttgaccccaatgtcactgaagataccctaaaacaagttttttctccttacggtgaag 346 Query: 334 tcgtccatgtcaagatccctgttgggaagagatgtggctttgttcagtatgctaacaggc 393 |||||||||| |||||||||||||||||||||||||| |||||||||| | || ||| | Sbjct: 347 tcgtccatgttaagatccctgttgggaagagatgtggttttgttcagttcgttaccagac 406 Query: 394 cttctgctgagcaagctctgcaattgctgcaagggaccttggttggtggtcagaacgtga 453 |||||||||| ||||| |||| | ||||||||||| ||||| |||||| ||||| || Sbjct: 407 cttctgctgaacaagcgctgctaatgctgcaaggggccttgattggtgcacagaatgttc 466 Query: 454 ggctttcatggggacgaagcccttcgaacaaacaaactcagcctcag 500 | ||||||||||| |||||| |||||||| || ||||||||||| Sbjct: 467 gactttcatggggtagaagcctgtcgaacaagcaggctcagcctcag 513 Score = 170 bits (86), Expect = 3e-39 Identities = 134/150 (89%) Strand = Plus / Plus Query: 26 agttgtgactgacaagatgacaatgcgttcaaagggttatgggtttgtcaagtttggtga 85 |||||||||||| || |||||||||| ||||||||||||| ||||| || |||||||| Sbjct: 45 agttgtgactgataaattgacaatgcgcacaaagggttatggatttgtgaaatttggtga 104 Query: 86 tcccacagagcaagctcgtgccatgactgagatgaatggaatgccctgttcttccagacc 145 ||| ||||||||||||||||| |||||||| |||||||||||||| ||||||||||| || Sbjct: 105 tcctacagagcaagctcgtgcaatgactgaaatgaatggaatgccttgttcttccaggcc 164 Query: 146 tatgcgcattggtccagcagcaaataggaa 175 |||||| |||||||| ||||||| |||||| Sbjct: 165 tatgcgtattggtcctgcagcaagtaggaa 194
>gb|AF402959.1| Oryza sativa chromosome 4 clones V17 and 214, genomic sequence Length = 64224 Score = 258 bits (130), Expect = 2e-65 Identities = 181/198 (91%) Strand = Plus / Plus Query: 1 attacccttcagtgaagggcgcaaaagttgtgactgacaagatgacaatgcgttcaaagg 60 |||||||||| || ||||| ||||||||||| |||||||| ||||||||||||||||||| Sbjct: 21516 attacccttcggttaagggtgcaaaagttgtaactgacaaaatgacaatgcgttcaaagg 21575 Query: 61 gttatgggtttgtcaagtttggtgatcccacagagcaagctcgtgccatgactgagatga 120 ||||||||||||| || ||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 21576 gttatgggtttgtgaaatttggtgatcctacagagcaagctcgtgcgatgactgaaatga 21635 Query: 121 atggaatgccctgttcttccagacctatgcgcattggtccagcagcaaataggaagacaa 180 ||||||||| |||||||||||||| ||||| ||||||||||| ||||||| ||| |||| Sbjct: 21636 atggaatgctttgttcttccagaccgatgcgtattggtccagcggcaaataagaaaacaa 21695 Query: 181 caggggttcaggagagag 198 |||||||||||||||||| Sbjct: 21696 caggggttcaggagagag 21713 Score = 135 bits (68), Expect = 2e-28 Identities = 116/132 (87%) Strand = Plus / Plus Query: 261 atatttgttggcggccttgaccccaatgtcactgaagatgccttgaaacaagtgtttgct 320 ||||| ||||| ||||||||||||| ||||||||||||| |||||||||||| || ||| Sbjct: 23208 atattcgttggtggccttgaccccagcgtcactgaagatgtcttgaaacaagttttcgct 23267 Query: 321 ccatatggggaagtcgtccatgtcaagatccctgttgggaagagatgtggctttgttcag 380 || ||||| ||||| |||||||| ||||| ||||||||||| |||||||| |||||||| Sbjct: 23268 ccttatggagaagttgtccatgttaagattcctgttgggaaaagatgtggttttgttcaa 23327 Query: 381 tatgctaacagg 392 |||| ||||||| Sbjct: 23328 tatgttaacagg 23339 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 389 caggccttctgctgagcaagctctgcaattgctgcaagggaccttggttggtggtcagaa 448 ||||||||||||||||||||| ||| | |||| |||||||||||| ||||||| ||||| Sbjct: 23442 caggccttctgctgagcaagcactggcagtgctacaagggaccttgattggtgggcagaa 23501 Query: 449 cgtgaggctttcatggggacgaagcccttcgaacaaaca 487 || || ||||||||||| ||||||| ||| |||||||| Sbjct: 23502 tgttagactttcatggggtcgaagcctttcaaacaaaca 23540 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 214 caaatactcaaggagctcagtctgacaatgatcctaacaataccacc 260 ||||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 23079 caaatgctcaaggagctcagtctgagaatgatcctaacaataccacc 23125 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 539 tgctggtggttactatgctggatatggacaag 570 ||||||||||||||||| ||| |||||||||| Sbjct: 23672 tgctggtggttactatggtggctatggacaag 23703
>gb|AY109460.1| Zea mays CL862_1 mRNA sequence Length = 1796 Score = 252 bits (127), Expect = 1e-63 Identities = 247/287 (86%) Strand = Plus / Plus Query: 214 caaatactcaaggagctcagtctgacaatgatcctaacaataccaccatatttgttggcg 273 ||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||| | Sbjct: 967 caaattctcaaggagctcagtctgagaatgatcctaacaataccactatatttgttggtg 1026 Query: 274 gccttgaccccaatgtcactgaagatgccttgaaacaagtgtttgctccatatggggaag 333 | ||||||||||||||||||||||||| | | ||||||| ||| |||| ||||| |||| Sbjct: 1027 ggcttgaccccaatgtcactgaagatgtcctaaaacaagcattttctccttatggcgaag 1086 Query: 334 tcgtccatgtcaagatccctgttgggaagagatgtggctttgttcagtatgctaacaggc 393 || ||||||| |||||||||||||||||||||||||| |||||||||| | || ||| | Sbjct: 1087 tcatccatgttaagatccctgttgggaagagatgtggttttgttcagttcgttaccagac 1146 Query: 394 cttctgctgagcaagctctgcaattgctgcaagggaccttggttggtggtcagaacgtga 453 ||||||||||||| || |||| | || |||||||| ||||| |||||| ||||| || Sbjct: 1147 cttctgctgagcaggcgctgctaatgttgcaaggggccttgattggtgcacagaatgttc 1206 Query: 454 ggctttcatggggacgaagcccttcgaacaaacaaactcagcctcag 500 ||||||| ||||| |||||| |||||||| || |||||||||||| Sbjct: 1207 ggctttcgtggggtagaagcctgtcgaacaagcagactcagcctcag 1253 Score = 95.6 bits (48), Expect = 2e-16 Identities = 81/92 (88%) Strand = Plus / Plus Query: 12 gtgaagggcgcaaaagttgtgactgacaagatgacaatgcgttcaaagggttatgggttt 71 |||||||| ||||||||||||||||| || |||||||||| | ||||||||||| ||| Sbjct: 771 gtgaagggtgcaaaagttgtgactgataaattgacaatgcgcaccaagggttatggattt 830 Query: 72 gtcaagtttggtgatcccacagagcaagctcg 103 || || ||||||||||| |||||||||||||| Sbjct: 831 gtgaaatttggtgatcctacagagcaagctcg 862 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 132 tgttcttccagacctatgcgcattggtccagcagcaaatagg 173 ||||||||||| |||||||| |||||||| ||||||| |||| Sbjct: 891 tgttcttccaggcctatgcgtattggtcctgcagcaagtagg 932
>emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060E08, complete sequence Length = 166951 Score = 250 bits (126), Expect = 4e-63 Identities = 180/198 (90%) Strand = Plus / Plus Query: 1 attacccttcagtgaagggcgcaaaagttgtgactgacaagatgacaatgcgttcaaagg 60 |||||||||| || ||||| ||||||||||| |||||||| ||||||||||||||||||| Sbjct: 27442 attacccttcggttaagggtgcaaaagttgtaactgacaaaatgacaatgcgttcaaagg 27501 Query: 61 gttatgggtttgtcaagtttggtgatcccacagagcaagctcgtgccatgactgagatga 120 ||||||||||||| || ||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 27502 gttatgggtttgtgaaatttggtgatcctacagagcaagctcgtgcaatgactgaaatga 27561 Query: 121 atggaatgccctgttcttccagacctatgcgcattggtccagcagcaaataggaagacaa 180 ||||||||| || ||||||||||| ||||| ||||||||||| ||||||| ||| |||| Sbjct: 27562 atggaatgctttgctcttccagaccgatgcgtattggtccagcggcaaataagaaaacaa 27621 Query: 181 caggggttcaggagagag 198 |||||||||||||||||| Sbjct: 27622 caggggttcaggagagag 27639 Score = 135 bits (68), Expect = 2e-28 Identities = 116/132 (87%) Strand = Plus / Plus Query: 261 atatttgttggcggccttgaccccaatgtcactgaagatgccttgaaacaagtgtttgct 320 ||||| ||||| || ||||||||||| ||||||||||||| |||||||||||| || ||| Sbjct: 29199 atattcgttggtggtcttgaccccaacgtcactgaagatgtcttgaaacaagttttcgct 29258 Query: 321 ccatatggggaagtcgtccatgtcaagatccctgttgggaagagatgtggctttgttcag 380 || ||||| ||||| |||||||| ||||| ||||||||||| |||||||| |||||||| Sbjct: 29259 ccttatggagaagttgtccatgttaagattcctgttgggaaaagatgtggttttgttcaa 29318 Query: 381 tatgctaacagg 392 |||| ||||||| Sbjct: 29319 tatgttaacagg 29330 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 389 caggccttctgctgagcaagctctgcaattgctgcaagggaccttggttggtggtcagaa 448 ||||||||||||||||||||| ||| | |||| |||||||||||| ||||||| ||||| Sbjct: 29432 caggccttctgctgagcaagcactggcagtgctacaagggaccttgattggtgggcagaa 29491 Query: 449 cgtgaggctttcatggggacgaagcccttcgaacaaaca 487 || || ||||| ||||| ||||||| ||| |||||||| Sbjct: 29492 tgttagactttcgtggggtcgaagcctttcaaacaaaca 29530 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 214 caaatactcaaggagctcagtctgacaatgatcctaacaataccacc 260 ||||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 29070 caaatgctcaaggagctcagtctgagaatgatcctaacaataccacc 29116 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 539 tgctggtggttactatgctggatatggacaag 570 ||||||||||||||||| ||| |||||||||| Sbjct: 29663 tgctggtggttactatggtggctatggacaag 29694
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 250 bits (126), Expect = 4e-63 Identities = 180/198 (90%) Strand = Plus / Plus Query: 1 attacccttcagtgaagggcgcaaaagttgtgactgacaagatgacaatgcgttcaaagg 60 |||||||||| || ||||| ||||||||||| |||||||| ||||||||||||||||||| Sbjct: 31854576 attacccttcggttaagggtgcaaaagttgtaactgacaaaatgacaatgcgttcaaagg 31854635 Query: 61 gttatgggtttgtcaagtttggtgatcccacagagcaagctcgtgccatgactgagatga 120 ||||||||||||| || ||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 31854636 gttatgggtttgtgaaatttggtgatcctacagagcaagctcgtgcaatgactgaaatga 31854695 Query: 121 atggaatgccctgttcttccagacctatgcgcattggtccagcagcaaataggaagacaa 180 ||||||||| || ||||||||||| ||||| ||||||||||| ||||||| ||| |||| Sbjct: 31854696 atggaatgctttgctcttccagaccgatgcgtattggtccagcggcaaataagaaaacaa 31854755 Query: 181 caggggttcaggagagag 198 |||||||||||||||||| Sbjct: 31854756 caggggttcaggagagag 31854773 Score = 135 bits (68), Expect = 2e-28 Identities = 116/132 (87%) Strand = Plus / Plus Query: 261 atatttgttggcggccttgaccccaatgtcactgaagatgccttgaaacaagtgtttgct 320 ||||| ||||| || ||||||||||| ||||||||||||| |||||||||||| || ||| Sbjct: 31856333 atattcgttggtggtcttgaccccaacgtcactgaagatgtcttgaaacaagttttcgct 31856392 Query: 321 ccatatggggaagtcgtccatgtcaagatccctgttgggaagagatgtggctttgttcag 380 || ||||| ||||| |||||||| ||||| ||||||||||| |||||||| |||||||| Sbjct: 31856393 ccttatggagaagttgtccatgttaagattcctgttgggaaaagatgtggttttgttcaa 31856452 Query: 381 tatgctaacagg 392 |||| ||||||| Sbjct: 31856453 tatgttaacagg 31856464 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 389 caggccttctgctgagcaagctctgcaattgctgcaagggaccttggttggtggtcagaa 448 ||||||||||||||||||||| ||| | |||| |||||||||||| ||||||| ||||| Sbjct: 31856566 caggccttctgctgagcaagcactggcagtgctacaagggaccttgattggtgggcagaa 31856625 Query: 449 cgtgaggctttcatggggacgaagcccttcgaacaaaca 487 || || ||||| ||||| ||||||| ||| |||||||| Sbjct: 31856626 tgttagactttcgtggggtcgaagcctttcaaacaaaca 31856664 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 214 caaatactcaaggagctcagtctgacaatgatcctaacaataccacc 260 ||||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 31856204 caaatgctcaaggagctcagtctgagaatgatcctaacaataccacc 31856250 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 539 tgctggtggttactatgctggatatggacaag 570 ||||||||||||||||| ||| |||||||||| Sbjct: 31856797 tgctggtggttactatggtggctatggacaag 31856828
>gb|AY107345.1| Zea mays PCO104090 mRNA sequence Length = 999 Score = 214 bits (108), Expect = 2e-52 Identities = 237/280 (84%) Strand = Plus / Plus Query: 220 ctcaaggagctcagtctgacaatgatcctaacaataccaccatatttgttggcggccttg 279 |||| |||| ||||||||||||||||||||||||||| ||||| |||||||| || |||| Sbjct: 252 ctcagggagttcagtctgacaatgatcctaacaatacaaccatttttgttggtggtcttg 311 Query: 280 accccaatgtcactgaagatgccttgaaacaagtgtttgctccatatggggaagtcgtcc 339 |||||||||||||||||||| ||||||||||| || | || |||||||| || |||| Sbjct: 312 accccaatgtcactgaagatatgttgaaacaagttttcaccccttatggggacgtagtcc 371 Query: 340 atgtcaagatccctgttgggaagagatgtggctttgttcagtatgctaacaggccttctg 399 |||| ||||| |||||||| || |||||||| |||||||| ||||||||||| |||| | Sbjct: 372 atgttaagattcctgttggcaaaagatgtggttttgttcaatatgctaacagatcttcgg 431 Query: 400 ctgagcaagctctgcaattgctgcaagggaccttggttggtggtcagaacgtgaggcttt 459 | ||| | || || | | |||||||| ||||||||||| || ||||| |||||||||| Sbjct: 432 cagaggaggcattggtaattctgcaaggcaccttggttggagggcagaatgtgaggcttt 491 Query: 460 catggggacgaagcccttcgaacaaacaaactcagcctca 499 ||||||| || |||||||| ||||||||| ||||||||| Sbjct: 492 catggggtcgcagcccttcaaacaaacaagttcagcctca 531 Score = 109 bits (55), Expect = 1e-20 Identities = 91/103 (88%) Strand = Plus / Plus Query: 55 caaagggttatgggtttgtcaagtttggtgatcccacagagcaagctcgtgccatgactg 114 ||||||||||||| ||||| |||||||||||||| | |||||||||||||| ||||||| Sbjct: 28 caaagggttatggttttgtgaagtttggtgatcctaatgagcaagctcgtgcaatgactg 87 Query: 115 agatgaatggaatgccctgttcttccagacctatgcgcattgg 157 |||||||||| |||| |||||||| || |||||||| ||||| Sbjct: 88 agatgaatggcatgctatgttcttctaggcctatgcgtattgg 130
>ref|XM_480466.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1284 Score = 182 bits (92), Expect = 8e-43 Identities = 233/280 (83%) Strand = Plus / Plus Query: 220 ctcaaggagctcagtctgacaatgatcctaacaataccaccatatttgttggcggccttg 279 ||||||||| ||||||||||| |||||||| ||||||||| ||||||||||| ||||||| Sbjct: 830 ctcaaggagttcagtctgacagtgatcctagcaataccactatatttgttggtggccttg 889 Query: 280 accccaatgtcactgaagatgccttgaaacaagtgtttgctccatatggggaagtcgtcc 339 | |||| ||||||||| ||| ||||||||||| || |||| ||||| || || |||| Sbjct: 890 atcccagtgtcactgacgatatgttgaaacaagttttcactccctatggagatgtggtcc 949 Query: 340 atgtcaagatccctgttgggaagagatgtggctttgttcagtatgctaacaggccttctg 399 |||| |||||||| ||||| || |||||||| |||||||| | ||||||||| |||||| Sbjct: 950 atgttaagatcccagttggaaaaagatgtggttttgttcaatttgctaacagagcttctg 1009 Query: 400 ctgagcaagctctgcaattgctgcaagggaccttggttggtggtcagaacgtgaggcttt 459 | || ||||| || | | || ||||| |||||| |||| || ||||| |||||||||| Sbjct: 1010 cagatgaagctttggtacttctacaaggtaccttgattggaggacagaatgtgaggcttt 1069 Query: 460 catggggacgaagcccttcgaacaaacaaactcagcctca 499 ||||||| || |||||||| || | |||| |||||||||| Sbjct: 1070 catggggccgcagcccttcaaatagacaagctcagcctca 1109 Score = 131 bits (66), Expect = 3e-27 Identities = 168/202 (83%) Strand = Plus / Plus Query: 1 attacccttcagtgaagggcgcaaaagttgtgactgacaagatgacaatgcgttcaaagg 60 ||||||| || |||||||| ||||| |||||||| || || ||||||||||||||||||| Sbjct: 623 attacccatctgtgaagggtgcaaaggttgtgacagataaaatgacaatgcgttcaaagg 682 Query: 61 gttatgggtttgtcaagtttggtgatcccacagagcaagctcgtgccatgactgagatga 120 | ||||| || ||||| ||||||||||| | |||||||| ||||| ||||| || |||| Sbjct: 683 gctatggcttcgtcaaatttggtgatccttccgagcaagcccgtgcaatgacagaaatga 742 Query: 121 atggaatgccctgttcttccagacctatgcgcattggtccagcagcaaataggaagacaa 180 |||| ||| |||||||| ||||||||||| || || ||||| ||||||| ||| ||| Sbjct: 743 atgggatggtttgttcttcaagacctatgcgtatcggcccagctgcaaataagaaagcaa 802 Query: 181 caggggttcaggagagagtacc 202 | || ||||| |||| |||||| Sbjct: 803 ctggagttcaagagaaagtacc 824
>dbj|AK072804.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135B10, full insert sequence Length = 1693 Score = 182 bits (92), Expect = 8e-43 Identities = 233/280 (83%) Strand = Plus / Plus Query: 220 ctcaaggagctcagtctgacaatgatcctaacaataccaccatatttgttggcggccttg 279 ||||||||| ||||||||||| |||||||| ||||||||| ||||||||||| ||||||| Sbjct: 982 ctcaaggagttcagtctgacagtgatcctagcaataccactatatttgttggtggccttg 1041 Query: 280 accccaatgtcactgaagatgccttgaaacaagtgtttgctccatatggggaagtcgtcc 339 | |||| ||||||||| ||| ||||||||||| || |||| ||||| || || |||| Sbjct: 1042 atcccagtgtcactgacgatatgttgaaacaagttttcactccctatggagatgtggtcc 1101 Query: 340 atgtcaagatccctgttgggaagagatgtggctttgttcagtatgctaacaggccttctg 399 |||| |||||||| ||||| || |||||||| |||||||| | ||||||||| |||||| Sbjct: 1102 atgttaagatcccagttggaaaaagatgtggttttgttcaatttgctaacagagcttctg 1161 Query: 400 ctgagcaagctctgcaattgctgcaagggaccttggttggtggtcagaacgtgaggcttt 459 | || ||||| || | | || ||||| |||||| |||| || ||||| |||||||||| Sbjct: 1162 cagatgaagctttggtacttctacaaggtaccttgattggaggacagaatgtgaggcttt 1221 Query: 460 catggggacgaagcccttcgaacaaacaaactcagcctca 499 ||||||| || |||||||| || | |||| |||||||||| Sbjct: 1222 catggggccgcagcccttcaaatagacaagctcagcctca 1261 Score = 131 bits (66), Expect = 3e-27 Identities = 168/202 (83%) Strand = Plus / Plus Query: 1 attacccttcagtgaagggcgcaaaagttgtgactgacaagatgacaatgcgttcaaagg 60 ||||||| || |||||||| ||||| |||||||| || || ||||||||||||||||||| Sbjct: 775 attacccatctgtgaagggtgcaaaggttgtgacagataaaatgacaatgcgttcaaagg 834 Query: 61 gttatgggtttgtcaagtttggtgatcccacagagcaagctcgtgccatgactgagatga 120 | ||||| || ||||| ||||||||||| | |||||||| ||||| ||||| || |||| Sbjct: 835 gctatggcttcgtcaaatttggtgatccttccgagcaagcccgtgcaatgacagaaatga 894 Query: 121 atggaatgccctgttcttccagacctatgcgcattggtccagcagcaaataggaagacaa 180 |||| ||| |||||||| ||||||||||| || || ||||| ||||||| ||| ||| Sbjct: 895 atgggatggtttgttcttcaagacctatgcgtatcggcccagctgcaaataagaaagcaa 954 Query: 181 caggggttcaggagagagtacc 202 | || ||||| |||| |||||| Sbjct: 955 ctggagttcaagagaaagtacc 976
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 125 bits (63), Expect = 2e-25 Identities = 144/171 (84%) Strand = Plus / Minus Query: 1 attacccttcagtgaagggcgcaaaagttgtgactgacaagatgacaatgcgttcaaagg 60 ||||||| || |||||||| ||||| |||||||| || || ||||||||||||||||||| Sbjct: 5265463 attacccatctgtgaagggtgcaaaggttgtgacagataaaatgacaatgcgttcaaagg 5265404 Query: 61 gttatgggtttgtcaagtttggtgatcccacagagcaagctcgtgccatgactgagatga 120 | ||||| || ||||| ||||||||||| | |||||||| ||||| ||||| || |||| Sbjct: 5265403 gctatggcttcgtcaaatttggtgatccttccgagcaagcccgtgcaatgacagaaatga 5265344 Query: 121 atggaatgccctgttcttccagacctatgcgcattggtccagcagcaaata 171 |||| ||| |||||||| ||||||||||| || || ||||| ||||||| Sbjct: 5265343 atgggatggtttgttcttcaagacctatgcgtatcggcccagctgcaaata 5265293 Score = 95.6 bits (48), Expect = 2e-16 Identities = 111/132 (84%) Strand = Plus / Minus Query: 261 atatttgttggcggccttgaccccaatgtcactgaagatgccttgaaacaagtgtttgct 320 ||||||||||| |||||||| |||| ||||||||| ||| ||||||||||| || || Sbjct: 5263180 atatttgttggtggccttgatcccagtgtcactgacgatatgttgaaacaagttttcact 5263121 Query: 321 ccatatggggaagtcgtccatgtcaagatccctgttgggaagagatgtggctttgttcag 380 || ||||| || || |||||||| |||||||| ||||| || |||||||| |||||||| Sbjct: 5263120 ccctatggagatgtggtccatgttaagatcccagttggaaaaagatgtggttttgttcaa 5263061 Query: 381 tatgctaacagg 392 | |||||||||| Sbjct: 5263060 tttgctaacagg 5263049 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 220 ctcaaggagctcagtctgacaatgatcctaacaataccac 259 ||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 5263303 ctcaaggagttcagtctgacagtgatcctagcaataccac 5263264 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 423 caagggaccttggttggtggtcagaacgtgaggctttcatggggacgaagcccttc 478 ||||| |||||| |||| || ||||| ||||||||||||||||| || |||||||| Sbjct: 5262921 caaggtaccttgattggaggacagaatgtgaggctttcatggggccgcagcccttc 5262866
>dbj|AP005531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1099H05 Length = 186036 Score = 125 bits (63), Expect = 2e-25 Identities = 144/171 (84%) Strand = Plus / Minus Query: 1 attacccttcagtgaagggcgcaaaagttgtgactgacaagatgacaatgcgttcaaagg 60 ||||||| || |||||||| ||||| |||||||| || || ||||||||||||||||||| Sbjct: 133819 attacccatctgtgaagggtgcaaaggttgtgacagataaaatgacaatgcgttcaaagg 133760 Query: 61 gttatgggtttgtcaagtttggtgatcccacagagcaagctcgtgccatgactgagatga 120 | ||||| || ||||| ||||||||||| | |||||||| ||||| ||||| || |||| Sbjct: 133759 gctatggcttcgtcaaatttggtgatccttccgagcaagcccgtgcaatgacagaaatga 133700 Query: 121 atggaatgccctgttcttccagacctatgcgcattggtccagcagcaaata 171 |||| ||| |||||||| ||||||||||| || || ||||| ||||||| Sbjct: 133699 atgggatggtttgttcttcaagacctatgcgtatcggcccagctgcaaata 133649 Score = 95.6 bits (48), Expect = 2e-16 Identities = 111/132 (84%) Strand = Plus / Minus Query: 261 atatttgttggcggccttgaccccaatgtcactgaagatgccttgaaacaagtgtttgct 320 ||||||||||| |||||||| |||| ||||||||| ||| ||||||||||| || || Sbjct: 131536 atatttgttggtggccttgatcccagtgtcactgacgatatgttgaaacaagttttcact 131477 Query: 321 ccatatggggaagtcgtccatgtcaagatccctgttgggaagagatgtggctttgttcag 380 || ||||| || || |||||||| |||||||| ||||| || |||||||| |||||||| Sbjct: 131476 ccctatggagatgtggtccatgttaagatcccagttggaaaaagatgtggttttgttcaa 131417 Query: 381 tatgctaacagg 392 | |||||||||| Sbjct: 131416 tttgctaacagg 131405 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 220 ctcaaggagctcagtctgacaatgatcctaacaataccac 259 ||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 131659 ctcaaggagttcagtctgacagtgatcctagcaataccac 131620 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 423 caagggaccttggttggtggtcagaacgtgaggctttcatggggacgaagcccttc 478 ||||| |||||| |||| || ||||| ||||||||||||||||| || |||||||| Sbjct: 131277 caaggtaccttgattggaggacagaatgtgaggctttcatggggccgcagcccttc 131222
>dbj|AP005505.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0610E02 Length = 135816 Score = 125 bits (63), Expect = 2e-25 Identities = 144/171 (84%) Strand = Plus / Minus Query: 1 attacccttcagtgaagggcgcaaaagttgtgactgacaagatgacaatgcgttcaaagg 60 ||||||| || |||||||| ||||| |||||||| || || ||||||||||||||||||| Sbjct: 57051 attacccatctgtgaagggtgcaaaggttgtgacagataaaatgacaatgcgttcaaagg 56992 Query: 61 gttatgggtttgtcaagtttggtgatcccacagagcaagctcgtgccatgactgagatga 120 | ||||| || ||||| ||||||||||| | |||||||| ||||| ||||| || |||| Sbjct: 56991 gctatggcttcgtcaaatttggtgatccttccgagcaagcccgtgcaatgacagaaatga 56932 Query: 121 atggaatgccctgttcttccagacctatgcgcattggtccagcagcaaata 171 |||| ||| |||||||| ||||||||||| || || ||||| ||||||| Sbjct: 56931 atgggatggtttgttcttcaagacctatgcgtatcggcccagctgcaaata 56881 Score = 95.6 bits (48), Expect = 2e-16 Identities = 111/132 (84%) Strand = Plus / Minus Query: 261 atatttgttggcggccttgaccccaatgtcactgaagatgccttgaaacaagtgtttgct 320 ||||||||||| |||||||| |||| ||||||||| ||| ||||||||||| || || Sbjct: 54768 atatttgttggtggccttgatcccagtgtcactgacgatatgttgaaacaagttttcact 54709 Query: 321 ccatatggggaagtcgtccatgtcaagatccctgttgggaagagatgtggctttgttcag 380 || ||||| || || |||||||| |||||||| ||||| || |||||||| |||||||| Sbjct: 54708 ccctatggagatgtggtccatgttaagatcccagttggaaaaagatgtggttttgttcaa 54649 Query: 381 tatgctaacagg 392 | |||||||||| Sbjct: 54648 tttgctaacagg 54637 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 220 ctcaaggagctcagtctgacaatgatcctaacaataccac 259 ||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 54891 ctcaaggagttcagtctgacagtgatcctagcaataccac 54852 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 423 caagggaccttggttggtggtcagaacgtgaggctttcatggggacgaagcccttc 478 ||||| |||||| |||| || ||||| ||||||||||||||||| || |||||||| Sbjct: 54509 caaggtaccttgattggaggacagaatgtgaggctttcatggggccgcagcccttc 54454
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 151 gcattggtccagcagcaaataggaagacaacaggggttcaggagagag 198 ||||||||||||||||||||| || ||||| |||||||||||||||| Sbjct: 18414602 gcattggtccagcagcaaataagagaacaactggggttcaggagagag 18414555 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 93 gagcaagctcgtgccatgactgagatgaatgga 125 |||||| | ||||| |||||||||||||||||| Sbjct: 19868286 gagcaaacacgtgctatgactgagatgaatgga 19868318
>dbj|AP003864.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_B11 Length = 102824 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 151 gcattggtccagcagcaaataggaagacaacaggggttcaggagagag 198 ||||||||||||||||||||| || ||||| |||||||||||||||| Sbjct: 6450 gcattggtccagcagcaaataagagaacaactggggttcaggagagag 6403
>dbj|AP004266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0038F10 Length = 153929 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 151 gcattggtccagcagcaaataggaagacaacaggggttcaggagagag 198 ||||||||||||||||||||| || ||||| |||||||||||||||| Sbjct: 144097 gcattggtccagcagcaaataagagaacaactggggttcaggagagag 144050
>gb|AY107267.1| Zea mays PCO073795 mRNA sequence Length = 1599 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 243 gatcctaacaataccaccatatttgttggcggccttgaccc 283 ||||| |||||||| || |||||||||||||||||||||| Sbjct: 935 gatccgaacaatactactgtatttgttggcggccttgaccc 975
>gb|BT012902.1| Lycopersicon esculentum clone 114011F, mRNA sequence Length = 1635 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Plus Query: 252 aataccaccatatttgttggcggccttgaccccaatgtca 291 |||||||| || |||||||| || |||||||||||||||| Sbjct: 975 aataccacaatttttgttggaggtcttgaccccaatgtca 1014
>ref|NM_101037.2| Arabidopsis thaliana ATRBP45B; RNA binding AT1G11650 (ATRBP45B) transcript variant AT1G11650.2 mRNA, complete cds Length = 1561 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 453 aggctttcatggggacgaagcccttcgaacaaaca 487 ||||| |||||||| ||||| |||||||||||||| Sbjct: 1100 aggctctcatggggccgaagtccttcgaacaaaca 1134
>ref|NM_179310.1| Arabidopsis thaliana ATRBP45B; RNA binding AT1G11650 (ATRBP45B) transcript variant AT1G11650.1 mRNA, complete cds Length = 1562 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 453 aggctttcatggggacgaagcccttcgaacaaaca 487 ||||| |||||||| ||||| |||||||||||||| Sbjct: 1101 aggctctcatggggccgaagtccttcgaacaaaca 1135
>gb|BT018995.1| Zea mays clone Contig483.F mRNA sequence Length = 1456 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 266 tgttggcggccttgaccccaatgtcactgaagatg 300 |||||| || |||||||||||||||| |||||||| Sbjct: 750 tgttggtgggcttgaccccaatgtcagtgaagatg 784
>gb|AC132580.2| Mus musculus BAC clone RP24-388H18 from chromosome 9, complete sequence Length = 127200 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 522 ggtgctgctgccggtgctgctggtggt 548 ||||||||||| ||||||||||||||| Sbjct: 31679 ggtgctgctgctggtgctgctggtggt 31653
>gb|AC166078.2| Mus musculus BAC clone RP23-13G1 from chromosome 9, complete sequence Length = 225128 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 522 ggtgctgctgccggtgctgctggtggt 548 ||||||||||| ||||||||||||||| Sbjct: 149989 ggtgctgctgctggtgctgctggtggt 149963
>emb|Z73587.1|SCYPL231W S.cerevisiae chromosome XVI reading frame ORF YPL231w Length = 7164 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 516 ggtgcaggtgctgctgccggtgc 538 ||||||||||||||||||||||| Sbjct: 1441 ggtgcaggtgctgctgccggtgc 1463
>emb|X94561.1|SCCHXVILA S.cerevisiae chromosome XVI left arm (EU) DNA segment Length = 20297 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 516 ggtgcaggtgctgctgccggtgc 538 ||||||||||||||||||||||| Sbjct: 7044 ggtgcaggtgctgctgccggtgc 7066
>emb|X76890.1|SCFAS2 S.cerevisiae FAS2 gene Length = 8989 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 516 ggtgcaggtgctgctgccggtgc 538 ||||||||||||||||||||||| Sbjct: 3599 ggtgcaggtgctgctgccggtgc 3621
>gb|BT008494.1| Arabidopsis thaliana At1g11650 gene, complete cds Length = 1218 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 453 aggctttcatggggacgaagcccttcgaacaaaca 487 ||||| |||||||| ||||| |||||||||||||| Sbjct: 979 aggctctcatggggccgaagtccttcgaacaaaca 1013
>gb|AY093201.1| Arabidopsis thaliana similar to gb|U90212 DNA binding protein ACBF from Nicotiana tabacum and contains 3 PF|00076 RNA recognition motif domains (At1g11650) mRNA, complete cds Length = 1511 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 453 aggctttcatggggacgaagcccttcgaacaaaca 487 ||||| |||||||| ||||| |||||||||||||| Sbjct: 1071 aggctctcatggggccgaagtccttcgaacaaaca 1105
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 518 tgcaggtgctgctgccggtgctgctgg 544 |||||||||||||||||| |||||||| Sbjct: 1381271 tgcaggtgctgctgccggcgctgctgg 1381245
>gb|AY086969.1| Arabidopsis thaliana clone 30022 mRNA, complete sequence Length = 1486 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 453 aggctttcatggggacgaagcccttcgaacaaaca 487 ||||| |||||||| ||||| |||||||||||||| Sbjct: 1045 aggctctcatggggccgaagtccttcgaacaaaca 1079
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 524 tgctgctgccggtgctgctggtg 546 ||||||||||||||||||||||| Sbjct: 2696361 tgctgctgccggtgctgctggtg 2696383
>ref|NM_212208.1| Eremothecium gossypii AFR525Cp (AFR525C), mRNA Length = 1194 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 518 tgcaggtgctgctgccggtgctgctgg 544 |||||||||||||||||| |||||||| Sbjct: 269 tgcaggtgctgctgccggcgctgctgg 295
>gb|AY104980.1| Zea mays PCO111857 mRNA sequence Length = 1651 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 266 tgttggcggccttgaccccaatgtcactgaagatg 300 |||||| || |||||||||||||||| |||||||| Sbjct: 959 tgttggtgggcttgaccccaatgtcagtgaagatg 993
>gb|AC007296.2|F25C20 Arabidopsis thaliana chromosome 1 BAC F25C20 sequence, complete sequence Length = 91566 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 453 aggctttcatggggacgaagcccttcgaacaaaca 487 ||||| |||||||| ||||| |||||||||||||| Sbjct: 73960 aggctctcatggggccgaagtccttcgaacaaaca 73926
>gb|J03936.1|YSCFAS2A S.cerevisiae FAS2 gene encoding alpha-subunit of fatty acid synthase, complete cds Length = 7555 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 516 ggtgcaggtgctgctgccggtgc 538 ||||||||||||||||||||||| Sbjct: 2305 ggtgcaggtgctgctgccggtgc 2327
>gb|AY493286.1| Anas platyrhynchos microsatellite CAUD041 sequence Length = 384 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Minus Query: 515 gggtgcaggtgctgctgccggtgctgctggtggt 548 |||||| | ||||||||| ||||||||||||||| Sbjct: 334 gggtgctgctgctgctgcgggtgctgctggtggt 301 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||| ||||||||||| |||||||||| Sbjct: 351 ggtgctggtgctgctgcgggtgctgctg 324
>ref|XM_960499.1| Neurospora crassa OR74A hypothetical protein (NCU02910.1) partial mRNA Length = 1185 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 522 ggtgctgctgccggtgctgctggtgg 547 |||||||||| ||||||||||||||| Sbjct: 871 ggtgctgctggcggtgctgctggtgg 896
>ref|XM_330097.1| Neurospora crassa OR74A hypothetical protein (NCU02910.1) partial mRNA Length = 1185 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 522 ggtgctgctgccggtgctgctggtgg 547 |||||||||| ||||||||||||||| Sbjct: 871 ggtgctgctggcggtgctgctggtgg 896
>gb|AC122896.4| Mus musculus BAC clone RP23-69N8 from chromosome 10, complete sequence Length = 232473 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 522 ggtgctgctgccggtgctgctggtgg 547 ||||||||||| |||||||||||||| Sbjct: 30926 ggtgctgctgctggtgctgctggtgg 30951
>ref|XM_754825.1| Ustilago maydis 521 hypothetical protein (UM03771.1) partial mRNA Length = 2217 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 521 aggtgctgctgccggtgctgctggtg 546 ||||| |||||||||||||||||||| Sbjct: 2110 aggtggtgctgccggtgctgctggtg 2085
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 523 gtgctgctgccggtgctgctggtggt 548 |||||||||| ||||||||||||||| Sbjct: 8988691 gtgctgctgcaggtgctgctggtggt 8988716
>emb|AL928985.24| Mouse DNA sequence from clone RP23-477P11 on chromosome 2, complete sequence Length = 83772 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 523 gtgctgctgccggtgctgctggtggt 548 |||||||||| ||||||||||||||| Sbjct: 54370 gtgctgctgctggtgctgctggtggt 54395
>gb|AC104809.5| Homo sapiens BAC clone RP11-637O3 from 2, complete sequence Length = 167196 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 512 gtggggtgcaggtgctgctgcc 533 |||||||||||||||||||||| Sbjct: 34302 gtggggtgcaggtgctgctgcc 34323
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 526 ctgctgccggtgctgctggtgg 547 |||||||||||||||||||||| Sbjct: 6199546 ctgctgccggtgctgctggtgg 6199567
>dbj|AP005387.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0084K06 Length = 177895 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 523 gtgctgctgccggtgctgctggtggt 548 |||||||||| ||||||||||||||| Sbjct: 36009 gtgctgctgcaggtgctgctggtggt 36034
>dbj|AK122070.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117I22, full insert sequence Length = 2126 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 523 gtgctgctgccggtgctgctggtggt 548 |||||||||| ||||||||||||||| Sbjct: 1599 gtgctgctgcaggtgctgctggtggt 1574
>dbj|AK064807.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000D18, full insert sequence Length = 1896 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 523 gtgctgctgccggtgctgctggtggt 548 |||||||||| ||||||||||||||| Sbjct: 1452 gtgctgctgcaggtgctgctggtggt 1427
>gb|AC079444.28| Mus musculus strain C57BL/6J chromosome 10 clone rp23-395k5, complete sequence Length = 171451 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 522 ggtgctgctgccggtgctgctggtgg 547 ||||||||||| |||||||||||||| Sbjct: 80943 ggtgctgctgctggtgctgctggtgg 80918
>gb|AC079681.38| Mus musculus strain C57BL/6J chromosome 10 clone rp23-310n21, complete sequence Length = 216807 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 522 ggtgctgctgccggtgctgctggtgg 547 ||||||||||| |||||||||||||| Sbjct: 26265 ggtgctgctgctggtgctgctggtgg 26240
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 521 aggtgctgctgccggtgctgct 542 |||||||||||||||||||||| Sbjct: 389817 aggtgctgctgccggtgctgct 389838 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 ctgctgccggtgctgctggt 545 |||||||||||||||||||| Sbjct: 2528207 ctgctgccggtgctgctggt 2528188
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 525 gctgctgccggtgctgctggt 545 ||||||||||||||||||||| Sbjct: 1610687 gctgctgccggtgctgctggt 1610667
>ref|NM_103642.2| Arabidopsis thaliana ATRBP47C; RNA binding AT1G47490 (ATRBP47C) transcript variant AT1G47490.1 mRNA, complete cds Length = 1724 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 54 tcaaagggttatgggtttgtcaagtttggtgat 86 |||||||| ||||||||||| | |||||||||| Sbjct: 844 tcaaaggggtatgggtttgtgaggtttggtgat 876
>ref|NM_202255.1| Arabidopsis thaliana ATRBP47C; RNA binding AT1G47490 (ATRBP47C) transcript variant AT1G47490.2 mRNA, complete cds Length = 1837 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 54 tcaaagggttatgggtttgtcaagtttggtgat 86 |||||||| ||||||||||| | |||||||||| Sbjct: 844 tcaaaggggtatgggtttgtgaggtttggtgat 876
>ref|NM_103848.2| Arabidopsis thaliana ATRBP47A; RNA binding AT1G49600 (ATRBP47A) mRNA, complete cds Length = 1688 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Plus Query: 345 aagatccctgttgggaagagatgtggctttgttcagtatgctaacaggc 393 |||||||| || ||||| ||||||||||||| || | ||||||||||| Sbjct: 1069 aagatcccagtagggaaaggatgtggctttgtccaatttgctaacaggc 1117
>ref|XM_478418.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1302 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 93 gagcaagctcgtgccatgactgagatgaatgga 125 |||||| | ||||| |||||||||||||||||| Sbjct: 622 gagcaaacacgtgctatgactgagatgaatgga 654
>ref|XM_478419.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1156 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 93 gagcaagctcgtgccatgactgagatgaatgga 125 |||||| | ||||| |||||||||||||||||| Sbjct: 722 gagcaaacacgtgctatgactgagatgaatgga 754
>gb|AC146131.4| Pan troglodytes BAC clone RP43-4F15 from 7, complete sequence Length = 179576 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 516 ggtgcaggtgctgctgccggtgctgctggtggt 548 ||||| ||||||| ||| ||||||||||||||| Sbjct: 60642 ggtgctggtgctggtgctggtgctgctggtggt 60674
>ref|XM_538486.2| PREDICTED: Canis familiaris luteinizing hormone receptor (LHR), mRNA Length = 2272 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 522 ggtgctgctgccggtgctgctggtg 546 |||||||||||||||||||| |||| Sbjct: 30 ggtgctgctgccggtgctgccggtg 54
>emb|AL590362.12| Human DNA sequence from clone RP11-214G2 on chromosome 9 Contains a CpG island, complete sequence Length = 154698 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 518 tgcaggtgctgctgccggtgctgctggtg 546 ||||| ||||| ||||||||||||||||| Sbjct: 138734 tgcagctgctggtgccggtgctgctggtg 138762
>emb|AL160269.14| Human DNA sequence from clone RP11-240L7 on chromosome 9 Contains the 3' end of a gene for a novel protein similar to a zinc finger protein, the gene for a nucleotide-sugar transporter (SQV7L) the HSD17B3 gene for hydroxysteroid (17-beta) dehydrogenase 3, 2 novel genes and two CpG islands, complete sequence Length = 169646 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 507 acccagtggggtgcaggtgct 527 ||||||||||||||||||||| Sbjct: 38618 acccagtggggtgcaggtgct 38638
>gb|BT009238.1| Triticum aestivum clone wlk1.pk0001.f8:fis, full insert mRNA sequence Length = 1160 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 102 cgtgccatgactgagatgaatggaatgcc 130 ||||| |||||||||||||||||| |||| Sbjct: 312 cgtgctatgactgagatgaatggagtgcc 340
>emb|BX017996.1|CNS08M1S Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA27AG08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 980 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 522 ggtgctgctgccggtgctgctggtggttactat 554 ||||||||||| |||||||||||| ||| |||| Sbjct: 98 ggtgctgctgctggtgctgctggtagttgctat 66
>gb|AF344325.1| Arabidopsis thaliana putative DNA binding protein (At1g47490) mRNA, complete cds Length = 1299 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 54 tcaaagggttatgggtttgtcaagtttggtgat 86 |||||||| ||||||||||| | |||||||||| Sbjct: 712 tcaaaggggtatgggtttgtgaggtttggtgat 744
>gb|AY062960.1| Arabidopsis thaliana putative DNA binding protein (At1g47490) mRNA, complete cds Length = 1330 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 54 tcaaagggttatgggtttgtcaagtttggtgat 86 |||||||| ||||||||||| | |||||||||| Sbjct: 712 tcaaaggggtatgggtttgtgaggtttggtgat 744
>gb|AY035180.1| Arabidopsis thaliana putative DNA binding protein (At1g47490) mRNA, complete cds Length = 1709 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 54 tcaaagggttatgggtttgtcaagtttggtgat 86 |||||||| ||||||||||| | |||||||||| Sbjct: 844 tcaaaggggtatgggtttgtgaggtttggtgat 876
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16 Length = 348624 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 516 ggtgcaggtgctgctgccggtgctg 540 ||||| ||||||||||||||||||| Sbjct: 34250 ggtgctggtgctgctgccggtgctg 34274
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14 Length = 348866 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 516 ggtgcaggtgctgctgccggtgctg 540 ||||| ||||||||||||||||||| Sbjct: 147412 ggtgctggtgctgctgccggtgctg 147436
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12 Length = 349672 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 516 ggtgcaggtgctgctgccggtgctg 540 ||||| ||||||||||||||||||| Sbjct: 101564 ggtgctggtgctgctgccggtgctg 101588
>emb|AJ313097.1|BVU313097 Beta vulgaris mRNA for salt tolerance protein 6 (sato6 gene) Length = 969 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 96 caagctcgtgccatgactgagatgaatggaatg 128 ||||| ||||||||| | ||||||||||||||| Sbjct: 412 caagcacgtgccatgtcagagatgaatggaatg 444
>dbj|AK061900.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-H03, full insert sequence Length = 1152 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 93 gagcaagctcgtgccatgactgagatgaatgga 125 |||||| | ||||| |||||||||||||||||| Sbjct: 144 gagcaaacacgtgctatgactgagatgaatgga 176
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 524 tgctgctgccggtgctgctgg 544 ||||||||||||||||||||| Sbjct: 1497398 tgctgctgccggtgctgctgg 1497378
>ref|NM_137930.2| Drosophila melanogaster CG3124-RA (CG3124), mRNA Length = 1169 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 524 tgctgctgccggtgctgctggtggt 548 ||||||||| ||||||||||||||| Sbjct: 782 tgctgctgctggtgctgctggtggt 758
>gb|AY089280.1| Drosophila melanogaster AT07821 full insert cDNA Length = 1181 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 524 tgctgctgccggtgctgctggtggt 548 ||||||||| ||||||||||||||| Sbjct: 774 tgctgctgctggtgctgctggtggt 750
>gb|AF441320.1|AF441320 PAH-contaminated sludge bacterium PB-25 16S ribosomal RNA gene, partial sequence Length = 430 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 gtgatcccacagagcaagctc 102 ||||||||||||||||||||| Sbjct: 28 gtgatcccacagagcaagctc 8
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 tgccatgactgagatgaatgg 124 ||||||||||||||||||||| Sbjct: 17446348 tgccatgactgagatgaatgg 17446368
>gb|AC008304.3|AC008304 Drosophila melanogaster, chromosome 2R, region 59D2-59D3, BAC clone BACR04G19, complete sequence Length = 181955 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 524 tgctgctgccggtgctgctggtggt 548 ||||||||| ||||||||||||||| Sbjct: 51247 tgctgctgctggtgctgctggtggt 51271
>emb|BX813781.1|CNS0AC3C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB39ZG06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1614 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 54 tcaaagggttatgggtttgtcaagtttggtgat 86 |||||||| ||||||||||| | |||||||||| Sbjct: 684 tcaaaggggtatgggtttgtgaggtttggtgat 716
>emb|BX815706.1|CNS0AAGP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS86ZA12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1618 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 54 tcaaagggttatgggtttgtcaagtttggtgat 86 |||||||| ||||||||||| | |||||||||| Sbjct: 812 tcaaaggggtatgggtttgtgaggtttggtgat 844
>dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome Length = 1358633 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 ccaattccaaatacaaatact 221 ||||||||||||||||||||| Sbjct: 730356 ccaattccaaatacaaatact 730376
>dbj|AP005755.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0019B14 Length = 127570 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 tgccatgactgagatgaatgg 124 ||||||||||||||||||||| Sbjct: 10526 tgccatgactgagatgaatgg 10546
>dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0054F02 Length = 180651 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 tgccatgactgagatgaatgg 124 ||||||||||||||||||||| Sbjct: 170261 tgccatgactgagatgaatgg 170281
>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0036M16 Length = 158880 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 93 gagcaagctcgtgccatgactgagatgaatgga 125 |||||| | ||||| |||||||||||||||||| Sbjct: 32936 gagcaaacacgtgctatgactgagatgaatgga 32968
>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0650C03 Length = 144337 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 93 gagcaagctcgtgccatgactgagatgaatgga 125 |||||| | ||||| |||||||||||||||||| Sbjct: 108445 gagcaaacacgtgctatgactgagatgaatgga 108477
>ref|XM_315414.2| Anopheles gambiae str. PEST ENSANGP00000014064 (ENSANGG00000011575), partial mRNA Length = 1290 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 520 caggtgctgctgccggtgctgctggtggt 548 |||||||||||| ||||| |||||||||| Sbjct: 635 caggtgctgctggcggtggtgctggtggt 663
>dbj|AK067260.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096N13, full insert sequence Length = 1615 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 tgccatgactgagatgaatgg 124 ||||||||||||||||||||| Sbjct: 797 tgccatgactgagatgaatgg 817
>dbj|AK062798.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-C10, full insert sequence Length = 1157 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 93 gagcaagctcgtgccatgactgagatgaatgga 125 |||||| | ||||| |||||||||||||||||| Sbjct: 723 gagcaaacacgtgctatgactgagatgaatgga 755
>dbj|AK060597.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-G08, full insert sequence Length = 1356 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 tgccatgactgagatgaatgg 124 ||||||||||||||||||||| Sbjct: 541 tgccatgactgagatgaatgg 561
>gb|AY110306.1| Zea mays CL773_2 mRNA sequence Length = 1267 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 tgccatgactgagatgaatgg 124 ||||||||||||||||||||| Sbjct: 382 tgccatgactgagatgaatgg 402
>gb|AC007519.2|F16N3 Sequence of BAC F16N3 from Arabidopsis thaliana chromosome 1, complete sequence Length = 171769 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 54 tcaaagggttatgggtttgtcaagtttggtgat 86 |||||||| ||||||||||| | |||||||||| Sbjct: 140510 tcaaaggggtatgggtttgtgaggtttggtgat 140478
>emb|AJ718892.1| Nicotiana tabacum cDNA-AFLP-fragment BSTC14-2-275, cultivar Bright Yellow 2 Length = 210 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 100 ctcgtgccatgactgagatgaatgg 124 |||| |||||||||||||||||||| Sbjct: 127 ctcgggccatgactgagatgaatgg 103
>gb|AE003460.2| Drosophila melanogaster chromosome 2R, section 68 of 73 of the complete sequence Length = 299331 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 524 tgctgctgccggtgctgctggtggt 548 ||||||||| ||||||||||||||| Sbjct: 103724 tgctgctgctggtgctgctggtggt 103748
>gb|BC063993.1| Danio rerio tRNA selenocysteine associated protein 1, mRNA (cDNA clone MGC:77884 IMAGE:6996630), complete cds Length = 2232 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 56 aaagggttatgggtttgtcaagttt 80 |||||||||||| |||||||||||| Sbjct: 1007 aaagggttatggctttgtcaagttt 1031
>ref|NM_213251.1| Danio rerio tRNA selenocysteine associated protein 1 (trspap1), mRNA Length = 2232 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 56 aaagggttatgggtttgtcaagttt 80 |||||||||||| |||||||||||| Sbjct: 1007 aaagggttatggctttgtcaagttt 1031
>gb|U90212.1|NTU90212 Nicotiana tabacum DNA binding protein ACBF mRNA, complete cds Length = 1556 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 ctcgtgccatgactgagatgaatgg 124 |||| |||||||||||||||||||| Sbjct: 737 ctcgggccatgactgagatgaatgg 761
>gb|L37336.1|TRBC1PG Trypanosoma congolense phosphoglycerate kinase (c1PGK) gene, 3' end of cds, and phosphoglycerate kinase (c2PGK) gene, complete cds Length = 2207 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 gtgcaggtgctgctgccggtg 537 ||||||||||||||||||||| Sbjct: 1453 gtgcaggtgctgctgccggtg 1473
>gb|L37337.1|TRB56PG Trypanosoma congolense phosphoglycerate kinase (56PGK, c1PGK, c2PGK) genes, complete cds Length = 4418 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 gtgcaggtgctgctgccggtg 537 ||||||||||||||||||||| Sbjct: 2857 gtgcaggtgctgctgccggtg 2877 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 gtgcaggtgctgctgccggtg 537 ||||||||||||||||||||| Sbjct: 1204 gtgcaggtgctgctgccggtg 1224
>gb|AC134623.5| Mus musculus BAC clone RP23-20K21 from 8, complete sequence Length = 234976 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 cacagagcaagctcgtgccat 109 ||||||||||||||||||||| Sbjct: 53098 cacagagcaagctcgtgccat 53078
>gb|AF029351.1|AF029351 Nicotiana tabacum putative RNA binding protein (QRRBP-1) mRNA, partial cds Length = 1682 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 ctcgtgccatgactgagatgaatgg 124 |||| |||||||||||||||||||| Sbjct: 862 ctcgggccatgactgagatgaatgg 886
>emb|AL732564.12| Mouse DNA sequence from clone RP23-442G9 on chromosome 2, complete sequence Length = 211657 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 522 ggtgctgctgccggtgctgctggtg 546 ||||||||||| ||||||||||||| Sbjct: 206935 ggtgctgctgctggtgctgctggtg 206911
>emb|AL592403.6| Mouse DNA sequence from clone RP23-90A8 on chromosome 1, complete sequence Length = 165527 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 524 tgctgctgccggtgctgctggtggt 548 ||||||||| ||||||||||||||| Sbjct: 15452 tgctgctgctggtgctgctggtggt 15428
>dbj|AB052339.1| Lampetra japonica LjTTF-1 mRNA for thyroid transcription factor-1, complete cds Length = 2110 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 524 tgctgctgccggtgctgctggtggt 548 ||||||||| ||||||||||||||| Sbjct: 1060 tgctgctgctggtgctgctggtggt 1036
>gb|AY851689.1| Uncultured Microbacterium sp. clone p5 16S ribosomal RNA gene, partial sequence Length = 1491 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 1401 tgatcccacagagcaagctc 1420
>ref|NM_118834.2| Arabidopsis thaliana RNA binding AT4G27000 mRNA, complete cds Length = 1696 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 tcgtgccatgactgagatgaatgg 124 ||||||||||||||| |||||||| Sbjct: 778 tcgtgccatgactgaaatgaatgg 801
>gb|DQ228730.1| Bacterium ID5-18 16S ribosomal RNA gene, partial sequence Length = 488 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 70 tgatcccacagagcaagctc 51
>gb|AC164883.5| Mus musculus BAC clone RP23-88A20 from chromosome 15, complete sequence Length = 260402 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 agatccctgttgggaagaga 365 |||||||||||||||||||| Sbjct: 222599 agatccctgttgggaagaga 222580
>gb|AY398370.1| Danio rerio clone RK105A4F05 poly(A)-binding protein, cytoplasmic 1 (KM0002) mRNA, complete cds Length = 2175 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 tcaaagggttatgggtttgt 73 |||||||||||||||||||| Sbjct: 516 tcaaagggttatgggtttgt 535
>gb|DQ227343.1| Microbacterium sp. PHD-5 16S ribosomal RNA gene, partial sequence Length = 1489 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 93 tgatcccacagagcaagctc 74
>gb|BT018852.1| Zea mays clone EL01N0555H08.d mRNA sequence Length = 1780 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 93 gagcaagctcgtgccatgactgagatgaatggaatg 128 ||||| || ||||| ||||| ||||||||||||||| Sbjct: 908 gagcaggcacgtgctatgaccgagatgaatggaatg 943
>gb|AY622232.1| Uncultured actinobacterium clone C-CO51 16S ribosomal RNA gene, complete sequence Length = 1447 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 70 tgatcccacagagcaagctc 51
>gb|AY730719.1| Microbacterium sp. 130704Ws9 16S ribosomal RNA gene, partial sequence Length = 1343 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 72 tgatcccacagagcaagctc 53
>gb|DQ119293.3| Microbacterium sp. SK 18 16S ribosomal RNA gene, partial sequence Length = 1432 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 93 tgatcccacagagcaagctc 74
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 tgctgccggtgctgctggtg 546 |||||||||||||||||||| Sbjct: 2122789 tgctgccggtgctgctggtg 2122770
>gb|AF417868.1| Microbacterium sp. YSS/2001-1 16S ribosomal RNA gene, partial sequence Length = 1420 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 30 tgatcccacagagcaagctc 11
>ref|XM_424078.1| PREDICTED: Gallus gallus similar to Ornithine aminotransferase, mitochondrial precursor (Ornithine--oxo-acid aminotransferase) (LOC426431), partial mRNA Length = 979 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 524 tgctgctgccggtgctgctg 543 |||||||||||||||||||| Sbjct: 46 tgctgctgccggtgctgctg 27
>gb|DQ490451.1| Microbacteriaceae bacterium KVD-1982-06 16S ribosomal RNA gene, partial sequence Length = 1488 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 90 tgatcccacagagcaagctc 71
>gb|BC044513.1| Danio rerio zgc:55855, mRNA (cDNA clone MGC:55855 IMAGE:3818253), complete cds Length = 2256 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 tcaaagggttatgggtttgt 73 |||||||||||||||||||| Sbjct: 505 tcaaagggttatgggtttgt 524
>ref|XM_716050.1| Candida albicans SC5314 hypothetical protein (CaO19_8522), mRNA Length = 747 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 tgctgctgccggtgctgctg 543 |||||||||||||||||||| Sbjct: 699 tgctgctgccggtgctgctg 718
>ref|XM_715929.1| Candida albicans SC5314 phosphoglycerate mutase (CaO19_903), mRNA Length = 747 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 tgctgctgccggtgctgctg 543 |||||||||||||||||||| Sbjct: 699 tgctgctgccggtgctgctg 718
>gb|AF047639.1| Uncultured eubacterium TRB50 16S ribosomal RNA gene, partial sequence Length = 435 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 70 tgatcccacagagcaagctc 51
>gb|DQ460219.1| Microbacterium sp. 05-7823 16S ribosomal RNA gene, partial sequence Length = 426 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 24 tgatcccacagagcaagctc 5
>gb|DQ191237.1| Bacterium W5(2005) 16S ribosomal RNA gene, partial sequence Length = 742 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 68 tgatcccacagagcaagctc 49
>ref|NM_199839.1| Danio rerio zgc:55855 (zgc:55855), mRNA Length = 2256 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 tcaaagggttatgggtttgt 73 |||||||||||||||||||| Sbjct: 505 tcaaagggttatgggtttgt 524
>gb|AY038632.1| Uncultured eubacterium clone GL184.20 16S ribosomal RNA gene, partial sequence Length = 1322 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 57 tgatcccacagagcaagctc 38
>gb|AY038631.1| Uncultured eubacterium clone GL182.38 16S ribosomal RNA gene, partial sequence Length = 1322 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 57 tgatcccacagagcaagctc 38
>gb|AY038630.1| Uncultured eubacterium clone GL178.9 16S ribosomal RNA gene, partial sequence Length = 1322 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 57 tgatcccacagagcaagctc 38
>gb|AF423215.1| Uncultured soil bacterium clone 1245-2 16S ribosomal RNA gene, partial sequence Length = 1448 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 70 tgatcccacagagcaagctc 51
>gb|AY350712.1| Arabidopsis arenosa clone BAC Aer6D24, complete sequence Length = 87863 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 36377 ggtgcaggtgctgctgctgctgctgctg 36350
>gb|AC145799.2| Xenopus tropicalis clone CH216-55B16, complete sequence Length = 163674 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 gctgctgccggtgctgctgg 544 |||||||||||||||||||| Sbjct: 135086 gctgctgccggtgctgctgg 135067
>gb|DQ189973.1| Uncultured Microbacterium sp. clone SIMO-2998 16S ribosomal RNA gene, partial sequence Length = 728 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 38 tgatcccacagagcaagctc 19
>gb|AY275515.1| Microbacterium sp. MSB2098 16S ribosomal RNA gene, partial sequence Length = 507 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 90 tgatcccacagagcaagctc 71
>gb|AY504445.1| Bacillaceae bacterium C19 16S ribosomal RNA gene, partial sequence Length = 507 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 93 tgatcccacagagcaagctc 74
>gb|AC165352.2| Mus musculus BAC clone RP23-205C7 from chromosome 15, complete sequence Length = 202977 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 agatccctgttgggaagaga 365 |||||||||||||||||||| Sbjct: 89379 agatccctgttgggaagaga 89398
>gb|AY547556.1| Microbacterium sp. CME1 16S ribosomal RNA gene, complete sequence Length = 1532 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 1435 tgatcccacagagcaagctc 1454
>gb|BC023950.1| Mus musculus ethanolamine kinase 1, mRNA (cDNA clone IMAGE:5320201), partial cds Length = 3543 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 gctgctgccggtgctgctgg 544 |||||||||||||||||||| Sbjct: 345 gctgctgccggtgctgctgg 364
>gb|BC034743.1| Mus musculus ethanolamine kinase 1, mRNA (cDNA clone IMAGE:4952607), partial cds Length = 3475 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 gctgctgccggtgctgctgg 544 |||||||||||||||||||| Sbjct: 276 gctgctgccggtgctgctgg 295
>gb|AC139759.4| Mus musculus BAC clone RP23-385E10 from chromosome 18, complete sequence Length = 200426 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cccacagagcaagctcgtgccatg 110 |||||||||| ||||||||||||| Sbjct: 13731 cccacagagccagctcgtgccatg 13708
>gb|AY395032.1| Uncultured Microbacterium sp. clone NAB25 16S ribosomal RNA gene, partial sequence Length = 1444 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 48 tgatcccacagagcaagctc 29
>gb|AY395021.1| Microbacterium sp. NAB17 16S ribosomal RNA gene, partial sequence Length = 1468 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 69 tgatcccacagagcaagctc 50
>gb|AF176819.1| Xenopus tropicalis twist transcription factor mRNA, complete cds Length = 501 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 gctgctgccggtgctgctgg 544 |||||||||||||||||||| Sbjct: 189 gctgctgccggtgctgctgg 170
>gb|AC111142.16| Mus musculus chromosome 3, clone RP23-370L24, complete sequence Length = 171774 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||| ||||||||||| |||||||||| Sbjct: 137998 ggtgctggtgctgctgctggtgctgctg 137971
>ref|XM_991485.1| PREDICTED: Mus musculus ethanolamine kinase 1 (Etnk1), mRNA Length = 6635 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 gctgctgccggtgctgctgg 544 |||||||||||||||||||| Sbjct: 3424 gctgctgccggtgctgctgg 3443
>ref|XM_908334.2| PREDICTED: Mus musculus ethanolamine kinase 1 (Etnk1), mRNA Length = 6857 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 gctgctgccggtgctgctgg 544 |||||||||||||||||||| Sbjct: 3646 gctgctgccggtgctgctgg 3665
>ref|XM_979562.1| PREDICTED: Mus musculus ethanolamine kinase 1 (Etnk1), mRNA Length = 6857 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 gctgctgccggtgctgctgg 544 |||||||||||||||||||| Sbjct: 3646 gctgctgccggtgctgctgg 3665
>gb|AY439239.1| Microbacterium sp. GIC27y 16S ribosomal RNA gene, partial sequence Length = 720 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 32 tgatcccacagagcaagctc 13
>gb|AY509223.1| Microbacterium oxydans strain S28n 16S ribosomal RNA gene, partial sequence Length = 1445 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 57 tgatcccacagagcaagctc 38
>gb|AY509222.1| Microbacterium oxydans strain 187 16S ribosomal RNA gene, partial sequence Length = 1450 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 58 tgatcccacagagcaagctc 39
>gb|AY785738.1| Microbacterium oxydans isolate OUCZ46 16S ribosomal RNA gene, partial sequence Length = 1441 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 42 tgatcccacagagcaagctc 23
>gb|AY332192.1| Microbacterium sp. GWS-TZ-H111 16S ribosomal RNA gene, partial sequence Length = 695 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 86 tgatcccacagagcaagctc 67
>gb|AY332149.1| Microbacterium sp. GWS-SE-H100 16S ribosomal RNA gene, partial sequence Length = 830 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 86 tgatcccacagagcaagctc 67
>emb|AM110940.1| Bacillus subtilis partial 16S rRNA gene, isolate B-2032 Length = 1440 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 58 tgatcccacagagcaagctc 39
>ref|XM_849692.1| PREDICTED: Canis familiaris similar to non-POU domain containing, octamer-binding (LOC483074), mRNA Length = 1891 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 525 gctgctgccggtgctgctggtggt 548 |||||||| ||||||||||||||| Sbjct: 178 gctgctgctggtgctgctggtggt 155
>emb|AJ879106.1| Microbacterium sp. R1_3_cr partial 16S rRNA gene, strain R1_3_cr Length = 475 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 84 tgatcccacagagcaagctc 65
>emb|AJ879104.1| Microbacterium sp. B2_10_cr partial 16S rRNA gene, strain B2_10_cr Length = 609 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 53 tgatcccacagagcaagctc 34
>emb|AJ879101.1| Microbacterium sp. B2_4_cr partial 16S rRNA gene, strain B2_4_cr Length = 476 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 84 tgatcccacagagcaagctc 65
>emb|AJ879099.1| Microbacterium sp. B3_13_cr partial 16S rRNA gene, strain B3_13_cr Length = 639 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 57 tgatcccacagagcaagctc 38
>emb|AJ879095.1| Microbacterium sp. B3_1_cr partial 16S rRNA gene, strain B3_1_cr Length = 470 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 80 tgatcccacagagcaagctc 61
>gb|AC132955.3| Mus musculus BAC clone RP24-266J20 from chromosome 6, complete sequence Length = 174507 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 gctgctgccggtgctgctgg 544 |||||||||||||||||||| Sbjct: 128378 gctgctgccggtgctgctgg 128359
>gb|AY526712.1| Microbacterium sp. Muzt-I71 16S ribosomal RNA gene, partial sequence Length = 715 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 43 tgatcccacagagcaagctc 24
>gb|AY526705.1| Microbacterium sp. Muzt-G32 16S ribosomal RNA gene, partial sequence Length = 670 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 56 tgatcccacagagcaagctc 37
>emb|AJ863312.1| Uncultured bacterium partial 16S rRNA gene, clone 27RHU11 Length = 1010 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 70 tgatcccacagagcaagctc 51
>emb|AJ717357.1| Microbacterium oxydans 16S rRNA gene, isolate AC44 Length = 1510 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 80 tgatcccacagagcaagctc 61
>emb|AJ863358.1| Uncultured bacterium partial 16S rRNA gene, clone 5RHF39 Length = 1447 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 70 tgatcccacagagcaagctc 51
>emb|AJ717358.1| Microbacterium oxydans 16S rRNA gene, isolate CV71a Length = 1510 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 80 tgatcccacagagcaagctc 61
>emb|AJ717356.1| Microbacterium oxydans 16S rRNA gene, isolate AC94 Length = 1509 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 84 tgatcccacagagcaagctc 65
>gb|AC115123.4| Mus musculus BAC clone RP24-129O20 from 3, complete sequence Length = 181380 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||| ||||||||||| |||||||||| Sbjct: 1107 ggtgctggtgctgctgctggtgctgctg 1080
>gb|DQ129728.1| Microbacterium sp. HPC408 16S ribosomal RNA gene, partial sequence Length = 864 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 76 tgatcccacagagcaagctc 57
>gb|DQ129726.1| Microbacterium sp. HPC405 16S ribosomal RNA gene, partial sequence Length = 979 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 68 tgatcccacagagcaagctc 49
>gb|DQ448707.1| Microbacterium sp. CNJ743 PL04 16S ribosomal RNA gene, partial sequence Length = 1488 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 90 tgatcccacagagcaagctc 71
>emb|AJ864858.1| Microbacterium sp. J72 partial 16S rRNA gene, isolate J72 Length = 1480 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 70 tgatcccacagagcaagctc 51
>emb|Z99128.1|HS422H11 Human DNA sequence from clone RP3-422H11 on chromosome 6p21.1-22.2 Contains the 3' end of a novel gene, the SRPK1 gene for SFRS protein kinase 1 and two CpG islands, complete sequence Length = 112984 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 atgccttgaaacaagtgttt 317 |||||||||||||||||||| Sbjct: 65594 atgccttgaaacaagtgttt 65575
>ref|XM_795604.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC592333 (LOC592333), partial mRNA Length = 472 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 tgctgctgccggtgctgctg 543 |||||||||||||||||||| Sbjct: 205 tgctgctgccggtgctgctg 224
>emb|AJ876731.1| Microbacterium sp. R2_5 cr partial 16S rRNA gene, strain R2_5 cr Length = 472 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 80 tgatcccacagagcaagctc 61
>emb|AJ969168.1| Microbacterium sp. R-23195 16S rRNA gene, strain R-23195 Length = 921 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 70 tgatcccacagagcaagctc 51
>emb|AJ634952.1| Microbacterium sp. B0L3 partial 16S rRNA gene, isolate B0L3 Length = 427 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 38 tgatcccacagagcaagctc 19
>gb|AY062999.1| Arabidopsis thaliana putative DNA binding protein (At4g27000) mRNA, complete cds Length = 1279 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 tcgtgccatgactgagatgaatgg 124 ||||||||||||||| |||||||| Sbjct: 687 tcgtgccatgactgaaatgaatgg 710
>gb|AF370339.1| Arabidopsis thaliana putative DNA binding protein (At4g27000) mRNA, complete cds Length = 1691 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 tcgtgccatgactgagatgaatgg 124 ||||||||||||||| |||||||| Sbjct: 778 tcgtgccatgactgaaatgaatgg 801
>emb|X55735.1|DPBCD D.pseudoobscura bcd (bicoid) gene involved in anterior positional specification during embryogenesis Length = 3476 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 1583 ggtgcaggtgctgctgctgttgctgctg 1556
>gb|DQ105974.1| Microbacterium oxydans 16S ribosomal RNA gene, partial sequence Length = 1429 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 44 tgatcccacagagcaagctc 25
>gb|AY526672.1| Microbacterium sp. Muzt-F72 16S ribosomal RNA gene, partial sequence Length = 588 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 53 tgatcccacagagcaagctc 34
>gb|AY526635.1| Microbacterium sp. Muzt-B35 16S ribosomal RNA gene, partial sequence Length = 649 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 51 tgatcccacagagcaagctc 32
>gb|DQ122280.1| Actinobacterium iEAIC68 16S ribosomal RNA gene gene, partial sequence Length = 456 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 90 tgatcccacagagcaagctc 71
>gb|DQ122234.1| Microbacterium sp. iMCIII8 16S ribosomal RNA gene, partial sequence Length = 459 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 90 tgatcccacagagcaagctc 71
>gb|DQ122233.1| Microbacterium sp. iMCIII16 16S ribosomal RNA gene, partial sequence Length = 453 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 90 tgatcccacagagcaagctc 71
>gb|DQ122216.1| Microbacterium oxydans strain iDLIII10 16S ribosomal RNA gene, partial sequence Length = 466 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 86 tgatcccacagagcaagctc 67
>emb|BX569693.1| Synechococcus sp. WH8102 complete genome; segment 5/7 Length = 349213 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 tgctgctgccggtgctgctg 543 |||||||||||||||||||| Sbjct: 193569 tgctgctgccggtgctgctg 193588
>gb|DQ395689.1| Uncultured organism clone ctg_CGOF008 16S ribosomal RNA gene, partial sequence Length = 1518 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 89 tgatcccacagagcaagctc 70
>emb|AL935253.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 2/11 Length = 324050 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 524 tgctgctgccggtgctgctggtgg 547 ||||| |||||||||||||||||| Sbjct: 246724 tgctgttgccggtgctgctggtgg 246747
>emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 66 Length = 198372 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 101 tcgtgccatgactgagatgaatgg 124 ||||||||||||||| |||||||| Sbjct: 60845 tcgtgccatgactgaaatgaatgg 60822
>emb|AL035440.2|ATF10M23 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M23 (ESSA project) Length = 128574 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 101 tcgtgccatgactgagatgaatgg 124 ||||||||||||||| |||||||| Sbjct: 105002 tcgtgccatgactgaaatgaatgg 104979
>gb|AY822572.1| Bacterium PSD-1-5 16S ribosomal RNA gene, partial sequence Length = 711 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 31 tgatcccacagagcaagctc 12
>gb|AY822543.1| Bacterium RHA-3-12 16S ribosomal RNA gene, partial sequence Length = 849 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 68 tgatcccacagagcaagctc 49
>gb|AY822510.1| Bacterium RSB-1-14 16S ribosomal RNA gene, partial sequence Length = 857 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 61 tgatcccacagagcaagctc 42
>gb|BC074558.1| Xenopus tropicalis twist transcription factor, mRNA (cDNA clone MGC:69439 IMAGE:5335836), complete cds Length = 1338 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 gctgctgccggtgctgctgg 544 |||||||||||||||||||| Sbjct: 327 gctgctgccggtgctgctgg 308
>gb|AY661931.1| Bacterium 005-J small subunit ribosomal RNA gene, partial sequence Length = 432 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 82 tgatcccacagagcaagctc 63
>gb|DQ298378.1| Uncultured bacterium clone PR66 16S ribosomal RNA gene, partial sequence Length = 1380 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 90 tgatcccacagagcaagctc 71
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 gctgctgccggtgctgctgg 544 |||||||||||||||||||| Sbjct: 6245460 gctgctgccggtgctgctgg 6245479
>emb|AJ785984.1| Actinobacterium TH-G25 partial 16S rRNA gene Length = 636 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 52 tgatcccacagagcaagctc 33
>gb|DQ417926.1| Microbacterium sp. ZD-M2 16S ribosomal RNA gene, partial sequence Length = 1464 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 63 tgatcccacagagcaagctc 44
>dbj|AB234881.1| Trifolium pratense mRNA for putative DNA binding protein, complete cds Length = 3067 Score = 40.1 bits (20), Expect = 7.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 454 ggctttcatggggacgaagcccttcgaacaaacaaactca 493 ||||||||||||| |||||||| | |||||||| ||||| Sbjct: 2630 ggctttcatggggccgaagcccagcaaacaaacagactca 2669
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 gctgctgccggtgctgctgg 544 |||||||||||||||||||| Sbjct: 4766730 gctgctgccggtgctgctgg 4766749
>gb|DQ063077.1| Actinobacterium BAL137 16S ribosomal RNA gene, partial sequence Length = 443 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 66 tgatcccacagagcaagctc 47
>gb|DQ412995.1| Bacterium E4B 16S ribosomal RNA gene gene, partial sequence Length = 560 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 27 tgatcccacagagcaagctc 8
>gb|DQ412991.1| Bacterium O1 16S ribosomal RNA gene gene, partial sequence Length = 836 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 68 tgatcccacagagcaagctc 49
>gb|DQ401245.1| Microbacterium sp. iMSN37 16S ribosomal RNA gene, partial sequence Length = 456 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 90 tgatcccacagagcaagctc 71
>gb|DQ403811.1| Microbacterium oxydans isolate NJ6 16S ribosomal RNA gene, partial sequence Length = 1387 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 27 tgatcccacagagcaagctc 8
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 gctgctgccggtgctgctgg 544 |||||||||||||||||||| Sbjct: 508879 gctgctgccggtgctgctgg 508860
>dbj|AB004718.1| Microbacterium luteolum gene for 16S rRNA, partial sequence Length = 1440 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 55 tgatcccacagagcaagctc 36
>gb|AY093292.1| Arabidopsis thaliana putative DNA binding protein (At4g27000) mRNA, complete cds Length = 1408 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 tcgtgccatgactgagatgaatgg 124 ||||||||||||||| |||||||| Sbjct: 687 tcgtgccatgactgaaatgaatgg 710
>gb|AF450964.1| Drosophila miranda strain Mather28 bicoid (bcd) gene, partial cds Length = 1369 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 811 ggtgcaggtgctgctgctgttgctgctg 784
>gb|AF450963.1| Drosophila miranda strain MSH38 bicoid (bcd) gene, partial cds Length = 1369 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 811 ggtgcaggtgctgctgctgttgctgctg 784
>gb|AF450961.1| Drosophila persimilis strain MSH7 bicoid (bcd) gene, partial cds Length = 1387 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 817 ggtgcaggtgctgctgctgttgctgctg 790
>gb|AF450960.1| Drosophila persimilis strain MSH3 bicoid (bcd) gene, partial cds Length = 1378 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 808 ggtgcaggtgctgctgctgttgctgctg 781
>gb|AF450959.1| Drosophila persimilis strain MSH1 bicoid (bcd) gene, partial cds Length = 1378 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 808 ggtgcaggtgctgctgctgttgctgctg 781
>gb|AF450958.1| Drosophila persimilis strain MSH42 bicoid (bcd) gene, partial cds Length = 1378 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 808 ggtgcaggtgctgctgctgttgctgctg 781
>gb|AF450957.1| Drosophila persimilis strain MSH25 bicoid (bcd) gene, partial cds Length = 1378 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 808 ggtgcaggtgctgctgctgttgctgctg 781
>gb|AF450956.1| Drosophila persimilis strain MatherB bicoid (bcd) gene, partial cds Length = 1378 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 808 ggtgcaggtgctgctgctgttgctgctg 781
>gb|AF450955.1| Drosophila persimilis strain MatherG bicoid (bcd) gene, partial cds Length = 1378 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 808 ggtgcaggtgctgctgctgttgctgctg 781
>gb|AF450954.1| Drosophila persimilis strain Mather39 bicoid (bcd) gene, partial cds Length = 1360 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 790 ggtgcaggtgctgctgctgttgctgctg 763
>gb|AF450953.1| Drosophila persimilis strain Mather37 bicoid (bcd) gene, partial cds Length = 1378 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 808 ggtgcaggtgctgctgctgttgctgctg 781
>gb|AF450952.1| Drosophila persimilis strain Mather41 bicoid (bcd) gene, partial cds Length = 1384 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 808 ggtgcaggtgctgctgctgttgctgctg 781
>gb|AF450951.1| Drosophila persimilis strain Mather27 bicoid (bcd) gene, partial cds Length = 1378 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 808 ggtgcaggtgctgctgctgttgctgctg 781
>gb|AF450950.1| Drosophila persimilis strain Mather6 bicoid (bcd) gene, partial cds Length = 1378 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 808 ggtgcaggtgctgctgctgttgctgctg 781
>gb|AF450949.1| Drosophila persimilis strain Mather40 bicoid (bcd) gene, partial cds Length = 1378 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 808 ggtgcaggtgctgctgctgttgctgctg 781
>gb|AF450947.1| Drosophila pseudoobscura bogotana strain Potosi2 bicoid (bcd) gene, partial cds Length = 1378 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 808 ggtgcaggtgctgctgctgttgctgctg 781
>gb|AF450946.1| Drosophila pseudoobscura bogotana strain Toro4 bicoid (bcd) gene, partial cds Length = 1378 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 808 ggtgcaggtgctgctgctgttgctgctg 781
>gb|AF450934.1| Drosophila pseudoobscura strain MSH21 bicoid (bcd) gene, partial cds Length = 1378 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 808 ggtgcaggtgctgctgctgttgctgctg 781
>gb|AF450933.1| Drosophila pseudoobscura strain MSH24 bicoid (bcd) gene, partial cds Length = 1378 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 808 ggtgcaggtgctgctgctgttgctgctg 781
>gb|AF450932.1| Drosophila pseudoobscura strain MSH32 bicoid (bcd) gene, partial cds Length = 1381 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 811 ggtgcaggtgctgctgctgttgctgctg 784
>gb|AF450931.1| Drosophila pseudoobscura strain MSH9 bicoid (bcd) gene, partial cds Length = 1378 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 808 ggtgcaggtgctgctgctgttgctgctg 781
>gb|AF450929.1| Drosophila pseudoobscura strain Mather52 bicoid (bcd) gene, partial cds Length = 1351 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 793 ggtgcaggtgctgctgctgttgctgctg 766
>gb|AF450928.1| Drosophila pseudoobscura strain Mather48 bicoid (bcd) gene, partial cds Length = 1375 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 808 ggtgcaggtgctgctgctgttgctgctg 781
>gb|AF450926.1| Drosophila pseudoobscura strain Mather17 bicoid (bcd) gene, partial cds Length = 1378 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 808 ggtgcaggtgctgctgctgttgctgctg 781
>gb|AF450925.1| Drosophila pseudoobscura strain Mather10 bicoid (bcd) gene, partial cds Length = 1378 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 808 ggtgcaggtgctgctgctgttgctgctg 781
>gb|AF450924.1| Drosophila pseudoobscura strain Flagstaff18 bicoid (bcd) gene, partial cds Length = 1372 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 808 ggtgcaggtgctgctgctgttgctgctg 781
>gb|AF450923.1| Drosophila pseudoobscura strain Flagstaff16 bicoid (bcd) gene, partial cds Length = 1372 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 808 ggtgcaggtgctgctgctgttgctgctg 781
>gb|AF450922.1| Drosophila pseudoobscura strain Flagstaff14 bicoid (bcd) gene, partial cds Length = 1378 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 808 ggtgcaggtgctgctgctgttgctgctg 781
>gb|AF450921.1| Drosophila pseudoobscura strain Flagstaff6 bicoid (bcd) gene, partial cds Length = 1366 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 808 ggtgcaggtgctgctgctgttgctgctg 781
>gb|AF450920.1| Drosophila pseudoobscura strain Flagstaff5 bicoid (bcd) gene, partial cds Length = 1351 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 793 ggtgcaggtgctgctgctgttgctgctg 766
>gb|AF450919.1| Drosophila pseudoobscura strain AFC12 bicoid (bcd) gene, partial cds Length = 1378 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 808 ggtgcaggtgctgctgctgttgctgctg 781
>gb|AF450918.1| Drosophila pseudoobscura strain AFC7 bicoid (bcd) gene, partial cds Length = 1372 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 808 ggtgcaggtgctgctgctgttgctgctg 781
>gb|AF450917.1| Drosophila pseudoobscura strain AFC3 bicoid (bcd) gene, partial cds Length = 1372 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 808 ggtgcaggtgctgctgctgttgctgctg 781
>gb|AF450916.1| Drosophila pseudoobscura strain AF2 bicoid (bcd) gene, partial cds Length = 1369 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 811 ggtgcaggtgctgctgctgttgctgctg 784
>gb|AF450915.1| Drosophila pseudoobscura strain Abajo36 bicoid (bcd) gene, partial cds Length = 1372 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 808 ggtgcaggtgctgctgctgttgctgctg 781
>gb|AC100822.2| Homo sapiens chromosome 8, clone RP11-654O1, complete sequence Length = 186380 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 ggtgcaggtgctgctgccggtgctgctg 543 ||||||||||||||||| | |||||||| Sbjct: 23580 ggtgcaggtgctgctgctgctgctgctg 23553
>gb|AY039502.1| Soil bacterium S86D1 16S ribosomal RNA gene, partial sequence Length = 495 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 49 tgatcccacagagcaagctc 30
>gb|AY039447.1| Earthworm burrow bacterium B11D2 16S ribosomal RNA gene, partial sequence Length = 501 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 46 tgatcccacagagcaagctc 27
>gb|DQ417333.1| Microbacterium oxydans strain 15E 16S ribosomal RNA gene, partial sequence Length = 1380 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 90 tgatcccacagagcaagctc 71
>gb|DQ398000.1| Microbacterium sp. W22B22 16S ribosomal RNA gene, partial sequence Length = 725 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 66 tgatcccacagagcaagctc 47
>gb|DQ397999.1| Microbacterium sp. W22B21 16S ribosomal RNA gene, partial sequence Length = 725 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgatcccacagagcaagctc 102 |||||||||||||||||||| Sbjct: 67 tgatcccacagagcaagctc 48 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,161,536 Number of Sequences: 3902068 Number of extensions: 6161536 Number of successful extensions: 115826 Number of sequences better than 10.0: 355 Number of HSP's better than 10.0 without gapping: 355 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 114412 Number of HSP's gapped (non-prelim): 1411 length of query: 570 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 547 effective length of database: 17,143,297,704 effective search space: 9377383844088 effective search space used: 9377383844088 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)