ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags26o04 |
|---|---|
| Clone Library Name | barley_pub |
>MPCP_CHOFU (O61703) Phosphate carrier protein, mitochondrial precursor| (Phosphate transport protein) (PTP) Length = 349 Score = 144 bits (364), Expect = 9e-35 Identities = 77/126 (61%), Positives = 90/126 (71%) Frame = +3 Query: 12 MKFASFETIVELIYKHAVPVPKAECSKSSQLGISFAGGYIAGVFCAIVSHPADNLVSFLN 191 MKFA FE VEL+YKH VP P+AECSK QL ++FA GYIAGVFCAIVSHPAD +VS LN Sbjct: 218 MKFACFEKTVELLYKHVVPKPRAECSKGEQLVVTFAAGYIAGVFCAIVSHPADTVVSKLN 277 Query: 192 NAKGATVGDAVKKIGMLGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTGGAPPV 371 K ATVG V K+G G++ +GL RI+MIGTLT QW IYDA KV + +P PP Sbjct: 278 QDKTATVGSIVGKLGFAGVW-KGLGPRIIMIGTLTALQWFIYDAVKVWLRMP----RPPP 332 Query: 372 APVEES 389 A + ES Sbjct: 333 AEMPES 338
>MPCP_CAEEL (P40614) Phosphate carrier protein, mitochondrial precursor (PTP)| Length = 340 Score = 134 bits (336), Expect = 2e-31 Identities = 70/127 (55%), Positives = 86/127 (67%) Frame = +3 Query: 12 MKFASFETIVELIYKHAVPVPKAECSKSSQLGISFAGGYIAGVFCAIVSHPADNLVSFLN 191 MKFA FE VE +Y++ VP P+AECSK+ QL ++F GYIAGVFCAIVSHPAD +VS LN Sbjct: 211 MKFACFEKTVEALYQYVVPKPRAECSKAEQLVVTFVAGYIAGVFCAIVSHPADTVVSKLN 270 Query: 192 NAKGATVGDAVKKIGMLGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTGGAPPV 371 AT G +KK+G G++ +GL RI+MIGTLT QW IYD+ KV + LP PP Sbjct: 271 QDSQATAGGILKKLGFAGVW-KGLVPRIIMIGTLTALQWFIYDSVKVALNLPRP--PPPE 327 Query: 372 APVEESA 392 P A Sbjct: 328 MPASLKA 334
>MPCP_BOVIN (P12234) Phosphate carrier protein, mitochondrial precursor (PTP)| (Solute carrier family 25 member 3) Length = 362 Score = 132 bits (332), Expect = 5e-31 Identities = 68/126 (53%), Positives = 87/126 (69%) Frame = +3 Query: 12 MKFASFETIVELIYKHAVPVPKAECSKSSQLGISFAGGYIAGVFCAIVSHPADNLVSFLN 191 MKFA FE VE +YK VP P++ECSK QL ++F GYIAGVFCAIVSHPAD++VS LN Sbjct: 233 MKFACFERTVEALYKFVVPKPRSECSKPEQLVVTFVAGYIAGVFCAIVSHPADSVVSVLN 292 Query: 192 NAKGATVGDAVKKIGMLGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTGGAPPV 371 KG++ + +K++G G++ +GL RI+MIGTLT QW IYD+ KV LP PP Sbjct: 293 KEKGSSASEVLKRLGFRGVW-KGLFARIIMIGTLTALQWFIYDSVKVYFRLP----RPPP 347 Query: 372 APVEES 389 + ES Sbjct: 348 PEMPES 353
>MPCP_MOUSE (Q8VEM8) Phosphate carrier protein, mitochondrial precursor (PTP)| (Solute carrier family 25 member 3) Length = 357 Score = 131 bits (329), Expect = 1e-30 Identities = 67/126 (53%), Positives = 87/126 (69%) Frame = +3 Query: 12 MKFASFETIVELIYKHAVPVPKAECSKSSQLGISFAGGYIAGVFCAIVSHPADNLVSFLN 191 MKFA FE VE +YK VP P++EC+K+ QL ++F GYIAGVFCAIVSHPAD++VS LN Sbjct: 228 MKFACFERTVEALYKFVVPKPRSECTKAEQLVVTFVAGYIAGVFCAIVSHPADSVVSVLN 287 Query: 192 NAKGATVGDAVKKIGMLGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTGGAPPV 371 KG+T ++++G G++ +GL RI+MIGTLT QW IYD+ KV LP PP Sbjct: 288 KEKGSTASQVLQRLGFRGVW-KGLFARIIMIGTLTALQWFIYDSVKVYFRLP----RPPP 342 Query: 372 APVEES 389 + ES Sbjct: 343 PEMPES 348
>MPCP_RAT (P16036) Phosphate carrier protein, mitochondrial precursor (PTP)| (Solute carrier family 25 member 3) Length = 356 Score = 131 bits (329), Expect = 1e-30 Identities = 67/126 (53%), Positives = 87/126 (69%) Frame = +3 Query: 12 MKFASFETIVELIYKHAVPVPKAECSKSSQLGISFAGGYIAGVFCAIVSHPADNLVSFLN 191 MKFA FE VE +YK VP P++EC+K+ QL ++F GYIAGVFCAIVSHPAD++VS LN Sbjct: 227 MKFACFERTVEALYKFVVPKPRSECTKAEQLVVTFVAGYIAGVFCAIVSHPADSVVSVLN 286 Query: 192 NAKGATVGDAVKKIGMLGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTGGAPPV 371 KG+T ++++G G++ +GL RI+MIGTLT QW IYD+ KV LP PP Sbjct: 287 KEKGSTASQVLQRLGFRGVW-KGLFARIIMIGTLTALQWFIYDSVKVYFRLP----RPPP 341 Query: 372 APVEES 389 + ES Sbjct: 342 PEMPES 347
>MPCP_HUMAN (Q00325) Phosphate carrier protein, mitochondrial precursor (PTP)| (Solute carrier family 25 member 3) Length = 362 Score = 130 bits (326), Expect = 2e-30 Identities = 68/126 (53%), Positives = 86/126 (68%) Frame = +3 Query: 12 MKFASFETIVELIYKHAVPVPKAECSKSSQLGISFAGGYIAGVFCAIVSHPADNLVSFLN 191 MKFA FE VE +YK VP P++ECSK QL ++F GYIAGVFCAIVSHPAD++VS LN Sbjct: 233 MKFACFERTVEALYKFVVPKPRSECSKPEQLVVTFVAGYIAGVFCAIVSHPADSVVSVLN 292 Query: 192 NAKGATVGDAVKKIGMLGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTGGAPPV 371 KG++ +K++G G++ +GL RI+MIGTLT QW IYD+ KV LP PP Sbjct: 293 KEKGSSASLVLKRLGFKGVW-KGLFARIIMIGTLTALQWFIYDSVKVYFRLP----RPPP 347 Query: 372 APVEES 389 + ES Sbjct: 348 PEMPES 353
>PIC2_YEAST (P40035) Mitochondrial phosphate carrier protein 2 (Phosphate| transport protein 2) (PTP 2) (mPic 2) (Pi carrier isoform 2) Length = 300 Score = 112 bits (281), Expect = 4e-25 Identities = 63/120 (52%), Positives = 79/120 (65%), Gaps = 6/120 (5%) Frame = +3 Query: 15 KFASFETIVELIYKHAVPVPKAECSKSSQLGISFAGGYIAGVFCAIVSHPADNLVSFLNN 194 KF SFE IV+ IY +P K E + Q+ +SF GGY+AG+ CA VSHPAD +VS +N+ Sbjct: 183 KFTSFEKIVQKIYS-VLPKKKEEMNALQQISVSFVGGYLAGILCAAVSHPADVMVSKINS 241 Query: 195 AKGATVGDAV------KKIGMLGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTG 356 + A +V +KIG GL+ GL +RIVMIGTLT QW IYD+FK VGLPTTG Sbjct: 242 ERKANESMSVASKRIYQKIGFTGLWN-GLMVRIVMIGTLTSFQWLIYDSFKAYVGLPTTG 300
>MPCP_YEAST (P23641) Mitochondrial phosphate carrier protein (Phosphate| transport protein) (PTP) (mPic 1) (Mitochondrial import receptor) (p32) Length = 311 Score = 76.3 bits (186), Expect = 4e-14 Identities = 51/120 (42%), Positives = 65/120 (54%), Gaps = 7/120 (5%) Frame = +3 Query: 15 KFASFETIVELIYKHAVPVPKAECSKSSQLGISFAGGYIAGVFCAIVSHPADNLVSFLNN 194 KF FE E Y A P K + S +S ++ G AG+ AIVS PAD L+S +N Sbjct: 187 KFLVFERASEFYYGFAGP--KEKLSSTSTTLLNLLSGLTAGLAAAIVSQPADTLLSKVNK 244 Query: 195 AKGA----TVG---DAVKKIGMLGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTT 353 K A TVG K++G G F GLP R+VM+GTLT Q+GIY + K +G P T Sbjct: 245 TKKAPGQSTVGLLAQLAKQLGFFGSFA-GLPTRLVMVGTLTSLQFGIYGSLKSTLGCPPT 303
>MFRN_CAEBR (Q620A6) Mitoferrin| Length = 311 Score = 35.0 bits (79), Expect = 0.11 Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 22/96 (22%) Frame = +3 Query: 117 AGGYIAGVFCAIVSHPADNLVSFLNNAKGAT------------------VGDAVKKI--- 233 AGG +AG A V+ P D + + LN + A + DAV+ I Sbjct: 210 AGG-LAGGLAAAVTTPMDCVKTVLNTQQAAEADPSNRRIFLKARYRYRGISDAVRTIYSQ 268 Query: 234 -GMLGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVMV 338 GM G F+ GL R++ T W +Y+ FK M+ Sbjct: 269 RGMAG-FSCGLQARVIFQVPATALSWSVYELFKFML 303
>YQ51_CAEEL (Q09461) Putative mitochondrial carrier C16C10.1| Length = 360 Score = 32.3 bits (72), Expect = 0.69 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Frame = +3 Query: 108 ISFAGGYIAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKIGM----------LGLFTR 257 +SF G AGV +I +HP D + + G ++ D K I + F+ Sbjct: 270 VSFVSGAAAGVVASIFTHPFDVIKTNCQIRIGGSIDDMNKSITTVIKDMYHSRGISAFSS 329 Query: 258 GLPLRIVMIGTLTGAQWGIYDAFKVM 335 GL R+V + Y+ FK + Sbjct: 330 GLVPRLVKVSPSCAIMISFYEYFKFL 355
>SRFAA_BACSU (P27206) Surfactin synthetase subunit 1| Length = 3588 Score = 32.3 bits (72), Expect = 0.69 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Frame = -2 Query: 356 AGGRESHHNFKRIIDSPLSTSKSTN---HDDTKGEPSGEKAQHANLLNSIAHCSTLGIVE 186 A ES+H R + PL ++ N T G P G HAN+L ++ + L I E Sbjct: 1626 ADEEESYHADARNLALPLDSAAMANLTYTSGTTGTPKGNIVTHANILRTVKETNYLSITE 1685 Query: 185 E 183 + Sbjct: 1686 Q 1686
>MFRN_CAEEL (Q23125) Mitoferrin| Length = 312 Score = 32.3 bits (72), Expect = 0.69 Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 22/96 (22%) Frame = +3 Query: 117 AGGYIAGVFCAIVSHPADNLVSFLNNAKGAT------------------VGDAVKKI--- 233 AGG +AG A ++ P D + + LN + A + DAV+ I Sbjct: 211 AGG-LAGGLAAALTTPMDCVKTVLNTQQAAEADPANRRIFLQARYRYRGISDAVRTIYSQ 269 Query: 234 -GMLGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVMV 338 G+ G F+ GL R++ T W +Y+ FK M+ Sbjct: 270 RGLSG-FSCGLQARVIFQVPATALSWSVYELFKFML 304
>ESPC_ECO27 (Q9EZE7) Serine protease espC precursor (EC 3.4.21.-)| (EPEC-secreted protein C) Length = 1305 Score = 31.6 bits (70), Expect = 1.2 Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 7/109 (6%) Frame = -2 Query: 407 SKNQSS*FLYRSNWWSTAGGRESHHNF-------KRIIDSPLSTSKSTNHDDTKGEPSGE 249 S N S ++Y S +G E +H F + I+D + + N +++ G Sbjct: 508 SVNNQSNYMYHG---SVSGNTEINHQFDTQKNNSRLILDGNVDITNDINIKNSQLTMQGH 564 Query: 248 KAQHANLLNSIAHCSTLGIVEERDKVVSRMRNNSTENTGNVATSKADTQ 102 HA C G++ E+D V + ++ N N K + Q Sbjct: 565 ATSHAVFREGGVTCMLPGVICEKDYVSGIQQQENSANKNNNTDYKTNNQ 613
>TENR_CHICK (Q00546) Tenascin-R precursor (TN-R) (Restrictin)| Length = 1353 Score = 31.2 bits (69), Expect = 1.5 Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 1/53 (1%) Frame = +2 Query: 299 CSVGNL*CV*SYGGTP-DHRRCSTSCSGRGISLIDFCCYDDVFLVVVIGGWDC 454 C G C Y G RC +CSGRG+ C +D + GG DC Sbjct: 275 CDNGTCVCAEGYAGEDCGWLRCPNACSGRGVCQDGLCICEDGY-----GGQDC 322
>DNC_PONPY (Q5NVC1) Mitochondrial deoxynucleotide carrier (Solute carrier| family 25 member 19) Length = 320 Score = 31.2 bits (69), Expect = 1.5 Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 7/113 (6%) Frame = +3 Query: 12 MKFASFETIVELIYKHAVPVPKAECSKSSQLGISFAGGYIAGVFCAIVSHPADNL-VSFL 188 ++F SFE + EL+++ +V + + + F G +A + HP D L F Sbjct: 95 VQFLSFEMLTELVHRGSV-------YDAREFSVHFVCGGLAACMATLTVHPVDVLRTRFA 147 Query: 189 NNAKGATVGDAVKKIGML------GLFTRGLPLRIVMIGTLTGAQWGIYDAFK 329 + +G + +F +GL ++ I G Q+ Y + K Sbjct: 148 AQGEPKVYNTLCHAVGTMYRSEGPQVFYKGLAPTLIAIFPYAGLQFSCYSSLK 200
>DNC_HUMAN (Q9HC21) Mitochondrial deoxynucleotide carrier (Solute carrier| family 25 member 19) (Mitochondrial uncoupling protein 1) Length = 320 Score = 30.4 bits (67), Expect = 2.6 Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 8/114 (7%) Frame = +3 Query: 12 MKFASFETIVELIYKHAVPVPKAECSKSSQLGISFAGGYIAGVFCAIVSHPADNLVS--- 182 ++F SFE + EL+++ +V + + + F G +A + HP D L + Sbjct: 95 VQFLSFEMLTELVHRGSV-------YDAREFSVHFVCGGLAACMATLTVHPVDVLRTRFA 147 Query: 183 -----FLNNAKGATVGDAVKKIGMLGLFTRGLPLRIVMIGTLTGAQWGIYDAFK 329 + N VG + G +F +GL ++ I G Q+ Y + K Sbjct: 148 AQGEPKVYNTLRHAVGTMYRSEGP-QVFYKGLAPTLIAIFPYAGLQFSCYSSLK 200
>KUP_XANCP (Q8P6E6) Probable potassium transport system protein kup| Length = 635 Score = 30.4 bits (67), Expect = 2.6 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = -3 Query: 262 SPLVKRPNMPIFLTASPTVAPLALLRN 182 +P + P M +FLTA P V P AL+ N Sbjct: 480 APPARVPGMAVFLTADPMVVPHALMHN 506
>HDA4_CAEBR (Q613L4) Histone deacetylase 4| Length = 892 Score = 30.0 bits (66), Expect = 3.4 Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 3/44 (6%) Frame = -3 Query: 439 NNHNQEYIVIAAKINQADSSTGATGGAP---PVVGSPTITLNAS 317 ++ + + V+ A++ +A SSTG+TGGA PV+ S + L A+ Sbjct: 5 SSSSSSFPVVFARMEEASSSTGSTGGAMAGIPVIPSTSAALLAN 48
>FA57B_MOUSE (Q7TNV1) Protein FAM57B| Length = 225 Score = 30.0 bits (66), Expect = 3.4 Identities = 17/48 (35%), Positives = 23/48 (47%) Frame = +1 Query: 124 ATLPVFSVLLFLIRLTTLSRSSTMPRVLQWAMLLRRLACWAFSPEGSP 267 A LP+ SV + + L + + L W L+ R AC F P GSP Sbjct: 169 AGLPLLSVPMAIPAHVNLGAALLLAPQLYWFFLICRGACRLFRPRGSP 216
>MFRN2_MOUSE (Q8R0Z5) Mitoferrin-2 (Mitochondrial iron transporter 2) (Solute| carrier family 25 member 28) (Mitochondrial RNA splicing protein 3/4 homolog) (MRS3/4) Length = 364 Score = 30.0 bits (66), Expect = 3.4 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 14/86 (16%) Frame = +3 Query: 123 GYIAGVFCAIVSHPADNLVSFLN---------NAKGATVGDA-----VKKIGMLGLFTRG 260 G AG A + P D + LN N G G A V ++G + + RG Sbjct: 268 GACAGAVAAAATTPLDVCKTLLNTQESLALNSNITGHITGMASAFRTVYQVGGVTAYFRG 327 Query: 261 LPLRIVMIGTLTGAQWGIYDAFKVMV 338 + R++ T W +Y+ FK ++ Sbjct: 328 VQARVIYQIPSTAIAWSVYEFFKYLI 353
>ITB5_MOUSE (O70309) Integrin beta-5 precursor| Length = 798 Score = 29.6 bits (65), Expect = 4.4 Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 7/46 (15%) Frame = +2 Query: 47 YLQTRCSCSEGRVQQVF------PVGYQLCWWL-HCRCFLCYCFSS 163 YL TRC C EG Q + G LC C C C CF S Sbjct: 493 YLGTRCECQEGENQSGYQNLCREAEGKPLCSGRGECSCNQCSCFES 538
>YG5F_YEAST (P53320) Putative mitochondrial carrier YGR257C| Length = 366 Score = 29.6 bits (65), Expect = 4.4 Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 15/92 (16%) Frame = +3 Query: 111 SFAGGYIAGVFCAIVSHPADN-----LVSFLNNA--KGATVGDAVKKI--------GMLG 245 SFA G I+G+ AI +HP D +S +NN+ KG + K G+ Sbjct: 271 SFASGCISGMIAAICTHPFDVGKTRWQISMMNNSDPKGGNRSRNMFKFLETIWRTEGLAA 330 Query: 246 LFTRGLPLRIVMIGTLTGAQWGIYDAFKVMVG 341 L+T GL R++ I Y+ K + G Sbjct: 331 LYT-GLAARVIKIRPSCAIMISSYEISKKVFG 361
>Y076_MYCPN (P75041) Hypothetical protein MG061 homolog 1 (R02_orf564o)| Length = 564 Score = 29.6 bits (65), Expect = 4.4 Identities = 21/72 (29%), Positives = 30/72 (41%) Frame = +3 Query: 225 KKIGMLGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTGGAPPVAPVEESA*LIF 404 K IGM G+ +V++ LTG W I A G + P+ E A F Sbjct: 305 KMIGMYGICL------VVLVNPLTGGWWNILQAVSPASSFNVKDGVKTLKPL-EGAGGYF 357 Query: 405 AAMTMYSWLWLL 440 A + + LW+L Sbjct: 358 AGLPTLAILWVL 369
>DNC_MACFA (Q5IS35) Mitochondrial deoxynucleotide carrier (Solute carrier| family 25 member 19) Length = 320 Score = 29.6 bits (65), Expect = 4.4 Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 8/114 (7%) Frame = +3 Query: 12 MKFASFETIVELIYKHAVPVPKAECSKSSQLGISFAGGYIAGVFCAIVSHPADNLVS--- 182 ++F SFE + EL+++ +V + + + F G +A + HP D L + Sbjct: 95 VQFLSFEMLTELVHRGSV-------YDAREFSVHFVCGGLAACTATLTVHPVDVLRTRFA 147 Query: 183 -----FLNNAKGATVGDAVKKIGMLGLFTRGLPLRIVMIGTLTGAQWGIYDAFK 329 + N VG + G +F +GL ++ I G Q+ Y + K Sbjct: 148 AQGEPKVYNTLRHAVGTMYRSEGP-QVFYKGLAPTLIAIFPYAGLQFSCYSSLK 200
>NU4M_ACACA (Q37375) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH| dehydrogenase subunit 4) Length = 497 Score = 29.3 bits (64), Expect = 5.8 Identities = 13/36 (36%), Positives = 25/36 (69%) Frame = +1 Query: 118 LVATLPVFSVLLFLIRLTTLSRSSTMPRVLQWAMLL 225 LV+T+P+FS+ LF++ L+ +S T + ++ +LL Sbjct: 375 LVSTMPIFSLCLFILILSNISFPGTSSFIGEFLILL 410
>C43BP_BOVIN (Q9GKI7) Goodpasture antigen-binding protein (EC 2.7.11.9) (GPBP)| (Collagen type IV alpha-3-binding protein) (StAR-related lipid transfer protein 11) (StARD11) (START domain-containing protein 11) Length = 624 Score = 29.3 bits (64), Expect = 5.8 Identities = 19/50 (38%), Positives = 25/50 (50%) Frame = -2 Query: 308 PLSTSKSTNHDDTKGEPSGEKAQHANLLNSIAHCSTLGIVEERDKVVSRM 159 P T K N D KGE KA A +L +++HC L +V+ D RM Sbjct: 229 PHVTPKGINGIDFKGEAITFKATTAGILATLSHCIEL-MVKREDSWQKRM 277
>TM86A_MOUSE (Q9D8N3) Transmembrane protein 86A| Length = 241 Score = 29.3 bits (64), Expect = 5.8 Identities = 14/25 (56%), Positives = 19/25 (76%) Frame = +1 Query: 88 ASLPSWVSALLVATLPVFSVLLFLI 162 +S PSWVSA L+ LP+F + LFL+ Sbjct: 32 SSSPSWVSA-LIKCLPIFCLWLFLL 55
>TM86A_BOVIN (Q3MHQ7) Transmembrane protein 86A| Length = 240 Score = 29.3 bits (64), Expect = 5.8 Identities = 14/25 (56%), Positives = 19/25 (76%) Frame = +1 Query: 88 ASLPSWVSALLVATLPVFSVLLFLI 162 +S PSWVSA L+ LP+F + LFL+ Sbjct: 32 SSSPSWVSA-LIKCLPIFCLWLFLL 55
>MFRN2_HUMAN (Q96A46) Mitoferrin-2 (Mitochondrial iron transporter 2) (Solute| carrier family 25 member 28) (Mitochondrial RNA splicing protein 3/4 homolog) (MRS3/4) (hMRS3/4) Length = 364 Score = 28.9 bits (63), Expect = 7.6 Identities = 18/86 (20%), Positives = 33/86 (38%), Gaps = 14/86 (16%) Frame = +3 Query: 123 GYIAGVFCAIVSHPADNLVSFLNNAKGATVGD--------------AVKKIGMLGLFTRG 260 G AG A + P D + LN + + V ++G + + RG Sbjct: 268 GACAGAVAAAATTPLDVCKTLLNTQESLALNSHITGHITGMASAFRTVYQVGGVTAYFRG 327 Query: 261 LPLRIVMIGTLTGAQWGIYDAFKVMV 338 + R++ T W +Y+ FK ++ Sbjct: 328 VQARVIYQIPSTAIAWSVYEFFKYLI 353
>ACHA3_HUMAN (P32297) Neuronal acetylcholine receptor protein, alpha-3 subunit| precursor Length = 503 Score = 28.5 bits (62), Expect = 9.9 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = +1 Query: 73 RRPSAASLPSWVSALLVATLPVFSVLLFLIRLTTLSRSSTMPRVLQWAML 222 R P+ ++PSWV + + LP ++F+ R T+ ++ PR L A L Sbjct: 329 RTPTTHTMPSWVKTVFLNLLP---RVMFMTRPTSNEGNAQKPRPLYGAEL 375
>C43BP_MOUSE (Q9EQG9) Goodpasture antigen-binding protein (EC 2.7.11.9) (GPBP)| (Collagen type IV alpha-3-binding protein) (StAR-related lipid transfer protein 11) (StARD11) (START domain-containing protein 11) Length = 624 Score = 28.5 bits (62), Expect = 9.9 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = -2 Query: 308 PLSTSKSTNHDDTKGEPSGEKAQHANLLNSIAHCSTLGIVEE 183 P T K N D KGE KA A +L +++HC L + E Sbjct: 229 PHVTPKGINGIDFKGEAITFKATTAGILATLSHCIELMVKRE 270
>C43BP_HUMAN (Q9Y5P4) Goodpasture antigen-binding protein (EC 2.7.11.9) (GPBP)| (Collagen type IV alpha-3-binding protein) (StAR-related lipid transfer protein 11) (StARD11) (START domain-containing protein 11) Length = 624 Score = 28.5 bits (62), Expect = 9.9 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = -2 Query: 308 PLSTSKSTNHDDTKGEPSGEKAQHANLLNSIAHCSTLGIVEE 183 P T K N D KGE KA A +L +++HC L + E Sbjct: 229 PHVTPKGINGIDFKGEAITFKATTAGILATLSHCIELMVKRE 270
>KUP_GLUOX (Q5FQL0) Probable potassium transport system protein kup| Length = 675 Score = 28.5 bits (62), Expect = 9.9 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = -3 Query: 262 SPLVKRPNMPIFLTASPTVAPLALLRN 182 S ++ P + +FLTA+P + P +LL N Sbjct: 521 SRTIRVPGLAVFLTANPDIVPNSLLHN 547
>AP3B_ASHGO (Q759E2) AP-3 complex subunit beta (Beta-adaptin) (Adapter-related| protein complex 3 beta subunit) (Clathrin assembly protein large beta chain) (Clathrin assembly protein complex 3 beta large chain) Length = 781 Score = 28.5 bits (62), Expect = 9.9 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Frame = -2 Query: 368 WWSTAGGRESHHNFKRIIDSPLSTSKSTNH-DDTKGEPSGEKAQHANLLNS 219 ++S R+S KR+I STS+ T+H DD G SG+++ ++ ++S Sbjct: 725 FFSDVSARQSVPKAKRVIIEE-STSEETDHTDDESGSSSGDESTESSYVSS 774
>KUP_CAUCR (Q9ABT9) Probable potassium transport system protein kup| Length = 665 Score = 28.5 bits (62), Expect = 9.9 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -3 Query: 283 IMTIRRGSPLVKRPNMPIFLTASPTVAPLALLRN 182 +M I R + P IFLT+ P + P+AL+ N Sbjct: 504 LMDILRARAPHRAPGTAIFLTSDPDMTPVALMHN 537
>ACHB_TORCA (P02712) Acetylcholine receptor protein, beta subunit precursor| Length = 493 Score = 28.5 bits (62), Expect = 9.9 Identities = 13/48 (27%), Positives = 25/48 (52%) Frame = +1 Query: 73 RRPSAASLPSWVSALLVATLPVFSVLLFLIRLTTLSRSSTMPRVLQWA 216 R P+ ++P+W+ + + TLP F L++ R T + P ++ A Sbjct: 331 RSPNTHTMPNWIRQIFIETLPPF---LWIQRPVTTPSPDSKPTIISRA 375 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,045,105 Number of Sequences: 219361 Number of extensions: 1709579 Number of successful extensions: 4937 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 4737 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4922 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
