Clone Information

BLAST Search Result

Clone Name	bags26n09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	dbj\|AK061283.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	618	e-174
2	dbj\|AK101300.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	611	e-171
3	ref\|XM_482607.1\| Oryza sativa (japonica cultivar-group), mRNA	496	e-137
4	ref\|XM_507241.1\| PREDICTED Oryza sativa (japonica cultivar-group...	496	e-137
5	dbj\|AK102539.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	496	e-137
6	dbj\|AK060959.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	496	e-137
7	gb\|AY106351.1\| Zea mays PCO100185 mRNA sequence	450	e-123
8	dbj\|AP008215.1\| Oryza sativa (japonica cultivar-group) genomic D...	349	7e-93
9	dbj\|AP005636.2\| Oryza sativa (japonica cultivar-group) genomic D...	349	7e-93
10	dbj\|AP005784.3\| Oryza sativa (japonica cultivar-group) genomic D...	349	7e-93
11	dbj\|AP008214.1\| Oryza sativa (japonica cultivar-group) genomic D...	283	3e-73
12	dbj\|AP004702.3\| Oryza sativa (japonica cultivar-group) genomic D...	283	3e-73
13	gb\|AC162365.5\| Mus musculus chromosome 19, clone RP23-75P11, com...	46	0.13
14	gb\|AC113075.9\| Mus musculus chromosome 19, clone RP23-278F24, co...	46	0.13
15	gb\|AC140471.2\| Mus musculus BAC clone RP24-400H5 from chromosome...	44	0.52
16	gb\|AC162855.6\| Mus musculus chromosome 19, clone RP24-166N3, com...	44	0.52
17	dbj\|BS000080.1\| Pan troglodytes chromosome 22 clone:PTB-090L14, ...	44	0.52
18	dbj\|BS000079.1\| Pan troglodytes chromosome 22 clone:RP43-047O12,...	44	0.52
19	dbj\|AP000959.3\| Homo sapiens genomic DNA, chromosome 21 clone:RP...	44	0.52
20	dbj\|AP001684.1\| Homo sapiens genomic DNA, chromosome 21q, sectio...	44	0.52
21	emb\|AL133548.6\| Human DNA sequence from clone RP11-235O14 on chr...	42	2.0
22	emb\|AL035459.6\|HS81G23 Human DNA sequence from clone RP1-81G23 o...	42	2.0
23	gb\|AE004385.1\| Vibrio cholerae O1 biovar eltor str. N16961 chrom...	40	8.1
24	gb\|CP000272.1\| Burkholderia xenovorans LB400 chromosome 3, compl...	40	8.1
25	gb\|CP000271.1\| Burkholderia xenovorans LB400 chromosome 2, compl...	40	8.1
26	gb\|AC123769.5\| Homo sapiens chromosome 17, clone RP11-1086I4, co...	40	8.1
27	emb\|AL939131.1\|SCO939131 Streptomyces coelicolor A3(2) complete ...	40	8.1
28	gb\|AC024610.6\| Homo sapiens chromosome 17, clone RP11-17M24, com...	40	8.1
29	gb\|AC083837.4\| Homo sapiens chromosome 8, clone RP11-79H23, comp...	40	8.1
30	gb\|AC090686.4\| Homo sapiens chromosome 8, clone RP11-771F20, com...	40	8.1
31	emb\|BX284113.5\| Zebrafish DNA sequence from clone CH211-247M3 in...	40	8.1
32	gb\|AC093641.5\| Homo sapiens BAC clone RP11-335N7 from 2, complet...	40	8.1
33	ref\|XM_214825.3\| PREDICTED: Rattus norvegicus neuro-oncological ...	40	8.1
34	gb\|AY106278.1\| Zea mays PCO137999 mRNA sequence	40	8.1
35	gb\|AC007751.3\|AC007751 Homo sapiens, clone 5_A_11, complete sequ...	40	8.1
36	dbj\|AP006544.1\| Homo sapiens genomic DNA, chromosome 8q22.3, clo...	40	8.1
37	gb\|AC124354.4\| Mus musculus BAC clone RP24-481K12 from 12, compl...	40	8.1
38	emb\|CT030643.5\| Mouse DNA sequence from clone RP23-348M4 on chro...	40	8.1
39	emb\|AL807800.7\| Mouse DNA sequence from clone RP23-438D2 on chro...	40	8.1
40	dbj\|AB022197.1\| Halocynthia roretzi mRNA for homologue of mammli...	40	8.1

>dbj|AK061283.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-G01, full
           insert sequence
          Length = 1082

 Score =  618 bits (312), Expect = e-174
 Identities = 444/485 (91%), Gaps = 6/485 (1%)
 Strand = Plus / Plus

                                                                       
Query: 103 ggagccatggaggcgtcgtcctgggacgcccttcgcaagcaggcgaggaggttggaagct 162
           ||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||
Sbjct: 182 ggagccatggaggcgtcttcttgggacgcccttcgcaagcaggcaaggaggttggaagct 241

                                                                       
Query: 163 cagttagacgaccaaatgattgcataccgtaaattggtttctatgaaatcagatggttca 222
           |||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 242 cagttagatgatcaaatgattgcataccgtaaattggtgtctatgaaatcagatggttca 301

                                                                       
Query: 223 gagaatgatatcgagactgatatagaaagatcactaaagcaacttcagcaagtaaattct 282
           ||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 302 gagaatgatatcgagtctgatatagaaagatcactgaagcagcttcagcaagtaaattct 361

                                                                       
Query: 283 caaatgcaaacctgggtatcgtcaggaggctcggaagttctttctcatacattaacccgt 342
           ||||||||||| |||||||| ||||||||||| |||||||||||||| ||||| ||||||
Sbjct: 362 caaatgcaaacttgggtatcatcaggaggctctgaagttctttctcacacattgacccgt 421

                                                                       
Query: 343 catatggagattttgcaagaccttacacaggaattctatcggcttcgatcaagtctcaga 402
           |||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||
Sbjct: 422 catatggagattttgcaagatcttactcaggaattctatcggcttcgatcaagcctcaga 481

                                                                       
Query: 403 gtgaagcaacaacatgcttccctccttgacttgagagactttgacagagcaaagtttgac 462
           |||||||||||||||||||| ||||||||| | ||||| |||||||||||||||||||| 
Sbjct: 482 gtgaagcaacaacatgcttcgctccttgacctaagagattttgacagagcaaagtttgat 541

                                                                       
Query: 463 gtggaagagtctggggactca---gaacaagctcttcttagagaacaagctgcaatcagc 519
           || | ||||  ||| ||||||   || |||||||||||||||||||||||||||||||| 
Sbjct: 542 gttg-agag--tggagactcagccgatcaagctcttcttagagaacaagctgcaatcagt 598

                                                                       
Query: 520 aggaattccggacaggtggatactgtgatatcacaagctcaagcaacactgggcgctctc 579
           |||| ||| |||||| |||||| |||||||||||| ||||||||||| || ||  |||||
Sbjct: 599 aggagttctggacagatggataatgtgatatcacatgctcaagcaacgctaggaactctc 658

                
Query: 580 atgtc 584
           |||||
Sbjct: 659 atgtc 663

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>dbj|AK101300.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033J17, full
           insert sequence
          Length = 1087

 Score =  611 bits (308), Expect = e-171
 Identities = 443/485 (91%), Gaps = 6/485 (1%)
 Strand = Plus / Plus

                                                                       
Query: 103 ggagccatggaggcgtcgtcctgggacgcccttcgcaagcaggcgaggaggttggaagct 162
           ||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||
Sbjct: 175 ggagccatggaggcgtcttcttgggacgcccttcgcaagcaggcaaggaggttggaagct 234

                                                                       
Query: 163 cagttagacgaccaaatgattgcataccgtaaattggtttctatgaaatcagatggttca 222
           |||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 235 cagttagatgatcaaatgattgcataccgtaaattggtgtctatgaaatcagatggttca 294

                                                                       
Query: 223 gagaatgatatcgagactgatatagaaagatcactaaagcaacttcagcaagtaaattct 282
           ||||||||||||||| ||||||||||||||||||| ||||| |||||||||| |||||||
Sbjct: 295 gagaatgatatcgagtctgatatagaaagatcactgaagcagcttcagcaagaaaattct 354

                                                                       
Query: 283 caaatgcaaacctgggtatcgtcaggaggctcggaagttctttctcatacattaacccgt 342
           ||||||||||| |||||||| ||||||||||| |||||||||||||| ||||| ||||||
Sbjct: 355 caaatgcaaacttgggtatcatcaggaggctctgaagttctttctcacacattgacccgt 414

                                                                       
Query: 343 catatggagattttgcaagaccttacacaggaattctatcggcttcgatcaagtctcaga 402
           |||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||
Sbjct: 415 catatggagattttgcaagatcttactcaggaattctatcggcttcgatcaagcctcaga 474

                                                                       
Query: 403 gtgaagcaacaacatgcttccctccttgacttgagagactttgacagagcaaagtttgac 462
           |||||||||||||||||||| ||||||||| | ||||| |||||||||||||||||||| 
Sbjct: 475 gtgaagcaacaacatgcttcgctccttgacctaagagattttgacagagcaaagtttgat 534

                                                                       
Query: 463 gtggaagagtctggggactca---gaacaagctcttcttagagaacaagctgcaatcagc 519
           || | ||||  ||| ||||||   || |||||||||||||||||||||||||||||||| 
Sbjct: 535 gttg-agag--tggagactcagccgatcaagctcttcttagagaacaagctgcaatcagt 591

                                                                       
Query: 520 aggaattccggacaggtggatactgtgatatcacaagctcaagcaacactgggcgctctc 579
           |||| ||| |||||| |||||| |||||||||||| ||||||||||| || ||  |||||
Sbjct: 592 aggagttctggacagatggataatgtgatatcacatgctcaagcaacgctaggaactctc 651

                
Query: 580 atgtc 584
           |||||
Sbjct: 652 atgtc 656

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>ref|XM_482607.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1021

 Score =  496 bits (250), Expect = e-137
 Identities = 406/458 (88%)
 Strand = Plus / Plus

                                                                       
Query: 106 gccatggaggcgtcgtcctgggacgcccttcgcaagcaggcgaggaggttggaagctcag 165
           |||||||||||||| |||||||||||||| ||||||||||| |||||| | |||||||||
Sbjct: 169 gccatggaggcgtcttcctgggacgccctccgcaagcaggcaaggaggctagaagctcag 228

                                                                       
Query: 166 ttagacgaccaaatgattgcataccgtaaattggtttctatgaaatcagatggttcagag 225
           ||||| |||||||||| ||| |||||||||||| |||| |||||||| |||||||| |||
Sbjct: 229 ttagatgaccaaatgagtgcttaccgtaaattgatttccatgaaatctgatggttctgag 288

                                                                       
Query: 226 aatgatatcgagactgatatagaaagatcactaaagcaacttcagcaagtaaattctcaa 285
           |||||||||||| | |||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 289 aatgatatcgagtccgatatagaaagatcgctgaagcaacttcagcaagtaaattctcaa 348

                                                                       
Query: 286 atgcaaacctgggtatcgtcaggaggctcggaagttctttctcatacattaacccgtcat 345
           ||||| || |||||||| ||||||||||| ||||| |||||||||||||| || ||||||
Sbjct: 349 atgcagacatgggtatcatcaggaggctcagaagtcctttctcatacattgactcgtcat 408

                                                                       
Query: 346 atggagattttgcaagaccttacacaggaattctatcggcttcgatcaagtctcagagtg 405
           |||||||| ||||||||||||||||||||||||||||| || |||||||| || ||||  
Sbjct: 409 atggagatattgcaagaccttacacaggaattctatcgcctccgatcaagccttagagca 468

                                                                       
Query: 406 aagcaacaacatgcttccctccttgacttgagagactttgacagagcaaagtttgacgtg 465
           ||||||||||||||||| || |||||||||||||| ||||||||||| |||||||| || 
Sbjct: 469 aagcaacaacatgcttctcttcttgacttgagagattttgacagagcgaagtttgatgtt 528

                                                                       
Query: 466 gaagagtctggggactcagaacaagctcttcttagagaacaagctgcaatcagcaggaat 525
           ||||||  ||  ||||| || |||||||| || | |||||||||||| |||||||||| |
Sbjct: 529 gaagagggtgctgactctgatcaagctctgctcaaagaacaagctgcgatcagcaggagt 588

                                                 
Query: 526 tccggacaggtggatactgtgatatcacaagctcaagc 563
            | || ||| ||||||| ||||||||||||||||||||
Sbjct: 589 actgggcagatggataccgtgatatcacaagctcaagc 626

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>ref|XM_507241.1| PREDICTED Oryza sativa (japonica cultivar-group), P0524F03.27 mRNA
          Length = 1088

 Score =  496 bits (250), Expect = e-137
 Identities = 406/458 (88%)
 Strand = Plus / Plus

                                                                       
Query: 106 gccatggaggcgtcgtcctgggacgcccttcgcaagcaggcgaggaggttggaagctcag 165
           |||||||||||||| |||||||||||||| ||||||||||| |||||| | |||||||||
Sbjct: 228 gccatggaggcgtcttcctgggacgccctccgcaagcaggcaaggaggctagaagctcag 287

                                                                       
Query: 166 ttagacgaccaaatgattgcataccgtaaattggtttctatgaaatcagatggttcagag 225
           ||||| |||||||||| ||| |||||||||||| |||| |||||||| |||||||| |||
Sbjct: 288 ttagatgaccaaatgagtgcttaccgtaaattgatttccatgaaatctgatggttctgag 347

                                                                       
Query: 226 aatgatatcgagactgatatagaaagatcactaaagcaacttcagcaagtaaattctcaa 285
           |||||||||||| | |||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 348 aatgatatcgagtccgatatagaaagatcgctgaagcaacttcagcaagtaaattctcaa 407

                                                                       
Query: 286 atgcaaacctgggtatcgtcaggaggctcggaagttctttctcatacattaacccgtcat 345
           ||||| || |||||||| ||||||||||| ||||| |||||||||||||| || ||||||
Sbjct: 408 atgcagacatgggtatcatcaggaggctcagaagtcctttctcatacattgactcgtcat 467

                                                                       
Query: 346 atggagattttgcaagaccttacacaggaattctatcggcttcgatcaagtctcagagtg 405
           |||||||| ||||||||||||||||||||||||||||| || |||||||| || ||||  
Sbjct: 468 atggagatattgcaagaccttacacaggaattctatcgcctccgatcaagccttagagca 527

                                                                       
Query: 406 aagcaacaacatgcttccctccttgacttgagagactttgacagagcaaagtttgacgtg 465
           ||||||||||||||||| || |||||||||||||| ||||||||||| |||||||| || 
Sbjct: 528 aagcaacaacatgcttctcttcttgacttgagagattttgacagagcgaagtttgatgtt 587

                                                                       
Query: 466 gaagagtctggggactcagaacaagctcttcttagagaacaagctgcaatcagcaggaat 525
           ||||||  ||  ||||| || |||||||| || | |||||||||||| |||||||||| |
Sbjct: 588 gaagagggtgctgactctgatcaagctctgctcaaagaacaagctgcgatcagcaggagt 647

                                                 
Query: 526 tccggacaggtggatactgtgatatcacaagctcaagc 563
            | || ||| ||||||| ||||||||||||||||||||
Sbjct: 648 actgggcagatggataccgtgatatcacaagctcaagc 685

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>dbj|AK102539.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033096J21, full
           insert sequence
          Length = 1088

 Score =  496 bits (250), Expect = e-137
 Identities = 406/458 (88%)
 Strand = Plus / Plus

                                                                       
Query: 106 gccatggaggcgtcgtcctgggacgcccttcgcaagcaggcgaggaggttggaagctcag 165
           |||||||||||||| |||||||||||||| ||||||||||| |||||| | |||||||||
Sbjct: 228 gccatggaggcgtcttcctgggacgccctccgcaagcaggcaaggaggctagaagctcag 287

                                                                       
Query: 166 ttagacgaccaaatgattgcataccgtaaattggtttctatgaaatcagatggttcagag 225
           ||||| |||||||||| ||| |||||||||||| |||| |||||||| |||||||| |||
Sbjct: 288 ttagatgaccaaatgagtgcttaccgtaaattgatttccatgaaatctgatggttctgag 347

                                                                       
Query: 226 aatgatatcgagactgatatagaaagatcactaaagcaacttcagcaagtaaattctcaa 285
           |||||||||||| | |||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 348 aatgatatcgagtccgatatagaaagatcgctgaagcaacttcagcaagtaaattctcaa 407

                                                                       
Query: 286 atgcaaacctgggtatcgtcaggaggctcggaagttctttctcatacattaacccgtcat 345
           ||||| || |||||||| ||||||||||| ||||| |||||||||||||| || ||||||
Sbjct: 408 atgcagacatgggtatcatcaggaggctcagaagtcctttctcatacattgactcgtcat 467

                                                                       
Query: 346 atggagattttgcaagaccttacacaggaattctatcggcttcgatcaagtctcagagtg 405
           |||||||| ||||||||||||||||||||||||||||| || |||||||| || ||||  
Sbjct: 468 atggagatattgcaagaccttacacaggaattctatcgcctccgatcaagccttagagca 527

                                                                       
Query: 406 aagcaacaacatgcttccctccttgacttgagagactttgacagagcaaagtttgacgtg 465
           ||||||||||||||||| || |||||||||||||| ||||||||||| |||||||| || 
Sbjct: 528 aagcaacaacatgcttctcttcttgacttgagagattttgacagagcgaagtttgatgtt 587

                                                                       
Query: 466 gaagagtctggggactcagaacaagctcttcttagagaacaagctgcaatcagcaggaat 525
           ||||||  ||  ||||| || |||||||| || | |||||||||||| |||||||||| |
Sbjct: 588 gaagagggtgctgactctgatcaagctctgctcaaagaacaagctgcgatcagcaggagt 647

                                                 
Query: 526 tccggacaggtggatactgtgatatcacaagctcaagc 563
            | || ||| ||||||| ||||||||||||||||||||
Sbjct: 648 actgggcagatggataccgtgatatcacaagctcaagc 685

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>dbj|AK060959.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-H08, full
           insert sequence
          Length = 1021

 Score =  496 bits (250), Expect = e-137
 Identities = 406/458 (88%)
 Strand = Plus / Plus

                                                                       
Query: 106 gccatggaggcgtcgtcctgggacgcccttcgcaagcaggcgaggaggttggaagctcag 165
           |||||||||||||| |||||||||||||| ||||||||||| |||||| | |||||||||
Sbjct: 169 gccatggaggcgtcttcctgggacgccctccgcaagcaggcaaggaggctagaagctcag 228

                                                                       
Query: 166 ttagacgaccaaatgattgcataccgtaaattggtttctatgaaatcagatggttcagag 225
           ||||| |||||||||| ||| |||||||||||| |||| |||||||| |||||||| |||
Sbjct: 229 ttagatgaccaaatgagtgcttaccgtaaattgatttccatgaaatctgatggttctgag 288

                                                                       
Query: 226 aatgatatcgagactgatatagaaagatcactaaagcaacttcagcaagtaaattctcaa 285
           |||||||||||| | |||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 289 aatgatatcgagtccgatatagaaagatcgctgaagcaacttcagcaagtaaattctcaa 348

                                                                       
Query: 286 atgcaaacctgggtatcgtcaggaggctcggaagttctttctcatacattaacccgtcat 345
           ||||| || |||||||| ||||||||||| ||||| |||||||||||||| || ||||||
Sbjct: 349 atgcagacatgggtatcatcaggaggctcagaagtcctttctcatacattgactcgtcat 408

                                                                       
Query: 346 atggagattttgcaagaccttacacaggaattctatcggcttcgatcaagtctcagagtg 405
           |||||||| ||||||||||||||||||||||||||||| || |||||||| || ||||  
Sbjct: 409 atggagatattgcaagaccttacacaggaattctatcgcctccgatcaagccttagagca 468

                                                                       
Query: 406 aagcaacaacatgcttccctccttgacttgagagactttgacagagcaaagtttgacgtg 465
           ||||||||||||||||| || |||||||||||||| ||||||||||| |||||||| || 
Sbjct: 469 aagcaacaacatgcttctcttcttgacttgagagattttgacagagcgaagtttgatgtt 528

                                                                       
Query: 466 gaagagtctggggactcagaacaagctcttcttagagaacaagctgcaatcagcaggaat 525
           ||||||  ||  ||||| || |||||||| || | |||||||||||| |||||||||| |
Sbjct: 529 gaagagggtgctgactctgatcaagctctgctcaaagaacaagctgcgatcagcaggagt 588

                                                 
Query: 526 tccggacaggtggatactgtgatatcacaagctcaagc 563
            | || ||| ||||||| ||||||||||||||||||||
Sbjct: 589 actgggcagatggataccgtgatatcacaagctcaagc 626

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>gb|AY106351.1| Zea mays PCO100185 mRNA sequence
          Length = 1179

 Score =  450 bits (227), Expect = e-123
 Identities = 415/477 (87%), Gaps = 3/477 (0%)
 Strand = Plus / Plus

                                                                       
Query: 109 atggaggcgtcgtcctgggacgcccttcgcaagcaggcgaggaggttggaagctcagtta 168
           ||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 155 atggaggcgtcttcctgggacgccgttcgcaagcaggcaaggaggttggaagctcagtta 214

                                                                       
Query: 169 gacgaccaaatgattgcataccgtaaattggtttctatgaaatcagatggttcagagaat 228
           || |||||||||||||||||||||||||||||||||||||||||||| ||||||||| | 
Sbjct: 215 gatgaccaaatgattgcataccgtaaattggtttctatgaaatcagacggttcagaggac 274

                                                                       
Query: 229 gatatcgagactgatatagaaagatcactaaagcaacttcagcaagtaaattctcaaatg 288
            | || ||| ||||||||||||||||||| |||||  | |||||||| ||||| ||||||
Sbjct: 275 aacattgagtctgatatagaaagatcactgaagcagttacagcaagtgaattcgcaaatg 334

                                                                       
Query: 289 caaacctgggtatcgtcaggaggctcggaagttctttctcatacattaacccgtcatatg 348
           ||||| |||||||| |||||||| || |||||||||||||||||  | || |||||||||
Sbjct: 335 caaacttgggtatcatcaggaggttctgaagttctttctcatactctgactcgtcatatg 394

                                                                       
Query: 349 gagattttgcaagaccttacacaggaattctatcggcttcgatcaagtctcagagtgaag 408
           |||||||||||||||||||| |||||||||||||||||||||||||||||||| |  || 
Sbjct: 395 gagattttgcaagaccttactcaggaattctatcggcttcgatcaagtctcagggcaaaa 454

                                                                       
Query: 409 caacaacatgcttccctccttgacttgagagactttgacagagcaaagtttgacgtggaa 468
           ||||| ||| |||| ||||||||||||||||| |||||||||||||||||||| || || 
Sbjct: 455 caacagcatacttctctccttgacttgagagattttgacagagcaaagtttgatgttgag 514

                                                                       
Query: 469 gagtctggggactca---gaacaagctcttcttagagaacaagctgcaatcagcaggaat 525
           ||| |    ||||||   || |||| |||||| || ||||||||||| ||  |||||| |
Sbjct: 515 gagccgtcagactcagctgatcaagttcttctcagggaacaagctgcgattggcaggagt 574

                                                                    
Query: 526 tccggacaggtggatactgtgatatcacaagctcaagcaacactgggcgctctcatg 582
            | |||||| ||||||  ||||||||||||||||| |||||||| ||  ||||||||
Sbjct: 575 actggacagatggataacgtgatatcacaagctcaggcaacacttggttctctcatg 631

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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  349 bits (176), Expect = 7e-93
 Identities = 218/232 (93%)
 Strand = Plus / Minus

                                                                            
Query: 142      caggcgaggaggttggaagctcagttagacgaccaaatgattgcataccgtaaattggtt 201
                ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||| 
Sbjct: 14870489 caggcaaggaggttggaagctcagttagatgatcaaatgattgcataccgtaaattggtg 14870430

                                                                            
Query: 202      tctatgaaatcagatggttcagagaatgatatcgagactgatatagaaagatcactaaag 261
                |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 14870429 tctatgaaatcagatggttcagagaatgatatcgagtctgatatagaaagatcactgaag 14870370

                                                                            
Query: 262      caacttcagcaagtaaattctcaaatgcaaacctgggtatcgtcaggaggctcggaagtt 321
                || ||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 14870369 cagcttcagcaagtaaattctcaaatgcaaacttgggtatcatcaggaggctctgaagtt 14870310

                                                                    
Query: 322      ctttctcatacattaacccgtcatatggagattttgcaagaccttacacagg 373
                |||||||| ||||| |||||||||||||||||||||||||| ||||| ||||
Sbjct: 14870309 ctttctcacacattgacccgtcatatggagattttgcaagatcttactcagg 14870258



 Score =  176 bits (89), Expect = 5e-41
 Identities = 152/170 (89%), Gaps = 6/170 (3%)
 Strand = Plus / Minus

                                                                            
Query: 370      caggaattctatcggcttcgatcaagtctcagagtgaagcaacaacatgcttccctcctt 429
                |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 14870013 caggaattctatcggcttcgatcaagcctcagagtgaagcaacaacatgcttcgctcctt 14869954

                                                                            
Query: 430      gacttgagagactttgacagagcaaagtttgacgtggaagagtctggggactca---gaa 486
                ||| | ||||| |||||||||||||||||||| || | ||||  ||| ||||||   || 
Sbjct: 14869953 gacctaagagattttgacagagcaaagtttgatgttg-agag--tggagactcagccgat 14869897

                                                                  
Query: 487      caagctcttcttagagaacaagctgcaatcagcaggaattccggacaggt 536
                |||||||||||||||||||||||||||||||| |||| ||| ||||||||
Sbjct: 14869896 caagctcttcttagagaacaagctgcaatcagtaggagttctggacaggt 14869847



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                           
Query: 103      ggagccatggaggcgtcgtcctgggacgcccttcgcaagcagg 145
                ||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 14871460 ggagccatggaggcgtcttcttgggacgcccttcgcaagcagg 14871418



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                                 
Query: 536      tggatactgtgatatcacaagctcaagcaacactgggcgctctcatgtc 584
                |||||| |||||||||||| ||||||||||| || ||  ||||||||||
Sbjct: 14867598 tggataatgtgatatcacatgctcaagcaacgctaggaactctcatgtc 14867550

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>dbj|AP005636.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0707C02
          Length = 163609

 Score =  349 bits (176), Expect = 7e-93
 Identities = 218/232 (93%)
 Strand = Plus / Minus

                                                                          
Query: 142    caggcgaggaggttggaagctcagttagacgaccaaatgattgcataccgtaaattggtt 201
              ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||| 
Sbjct: 155878 caggcaaggaggttggaagctcagttagatgatcaaatgattgcataccgtaaattggtg 155819

                                                                          
Query: 202    tctatgaaatcagatggttcagagaatgatatcgagactgatatagaaagatcactaaag 261
              |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 155818 tctatgaaatcagatggttcagagaatgatatcgagtctgatatagaaagatcactgaag 155759

                                                                          
Query: 262    caacttcagcaagtaaattctcaaatgcaaacctgggtatcgtcaggaggctcggaagtt 321
              || ||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 155758 cagcttcagcaagtaaattctcaaatgcaaacttgggtatcatcaggaggctctgaagtt 155699

                                                                  
Query: 322    ctttctcatacattaacccgtcatatggagattttgcaagaccttacacagg 373
              |||||||| ||||| |||||||||||||||||||||||||| ||||| ||||
Sbjct: 155698 ctttctcacacattgacccgtcatatggagattttgcaagatcttactcagg 155647



 Score =  176 bits (89), Expect = 5e-41
 Identities = 152/170 (89%), Gaps = 6/170 (3%)
 Strand = Plus / Minus

                                                                          
Query: 370    caggaattctatcggcttcgatcaagtctcagagtgaagcaacaacatgcttccctcctt 429
              |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 155402 caggaattctatcggcttcgatcaagcctcagagtgaagcaacaacatgcttcgctcctt 155343

                                                                          
Query: 430    gacttgagagactttgacagagcaaagtttgacgtggaagagtctggggactca---gaa 486
              ||| | ||||| |||||||||||||||||||| || | ||||  ||| ||||||   || 
Sbjct: 155342 gacctaagagattttgacagagcaaagtttgatgttg-agag--tggagactcagccgat 155286

                                                                
Query: 487    caagctcttcttagagaacaagctgcaatcagcaggaattccggacaggt 536
              |||||||||||||||||||||||||||||||| |||| ||| ||||||||
Sbjct: 155285 caagctcttcttagagaacaagctgcaatcagtaggagttctggacaggt 155236



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                         
Query: 103    ggagccatggaggcgtcgtcctgggacgcccttcgcaagcagg 145
              ||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 156849 ggagccatggaggcgtcttcttgggacgcccttcgcaagcagg 156807



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                               
Query: 536    tggatactgtgatatcacaagctcaagcaacactgggcgctctcatgtc 584
              |||||| |||||||||||| ||||||||||| || ||  ||||||||||
Sbjct: 152987 tggataatgtgatatcacatgctcaagcaacgctaggaactctcatgtc 152939

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>dbj|AP005784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0014G10
          Length = 164147

 Score =  349 bits (176), Expect = 7e-93
 Identities = 218/232 (93%)
 Strand = Plus / Minus

                                                                         
Query: 142   caggcgaggaggttggaagctcagttagacgaccaaatgattgcataccgtaaattggtt 201
             ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||| 
Sbjct: 78828 caggcaaggaggttggaagctcagttagatgatcaaatgattgcataccgtaaattggtg 78769

                                                                         
Query: 202   tctatgaaatcagatggttcagagaatgatatcgagactgatatagaaagatcactaaag 261
             |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 78768 tctatgaaatcagatggttcagagaatgatatcgagtctgatatagaaagatcactgaag 78709

                                                                         
Query: 262   caacttcagcaagtaaattctcaaatgcaaacctgggtatcgtcaggaggctcggaagtt 321
             || ||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 78708 cagcttcagcaagtaaattctcaaatgcaaacttgggtatcatcaggaggctctgaagtt 78649

                                                                 
Query: 322   ctttctcatacattaacccgtcatatggagattttgcaagaccttacacagg 373
             |||||||| ||||| |||||||||||||||||||||||||| ||||| ||||
Sbjct: 78648 ctttctcacacattgacccgtcatatggagattttgcaagatcttactcagg 78597



 Score =  176 bits (89), Expect = 5e-41
 Identities = 152/170 (89%), Gaps = 6/170 (3%)
 Strand = Plus / Minus

                                                                         
Query: 370   caggaattctatcggcttcgatcaagtctcagagtgaagcaacaacatgcttccctcctt 429
             |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 78352 caggaattctatcggcttcgatcaagcctcagagtgaagcaacaacatgcttcgctcctt 78293

                                                                         
Query: 430   gacttgagagactttgacagagcaaagtttgacgtggaagagtctggggactca---gaa 486
             ||| | ||||| |||||||||||||||||||| || | ||||  ||| ||||||   || 
Sbjct: 78292 gacctaagagattttgacagagcaaagtttgatgttg-agag--tggagactcagccgat 78236

                                                               
Query: 487   caagctcttcttagagaacaagctgcaatcagcaggaattccggacaggt 536
             |||||||||||||||||||||||||||||||| |||| ||| ||||||||
Sbjct: 78235 caagctcttcttagagaacaagctgcaatcagtaggagttctggacaggt 78186



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                        
Query: 103   ggagccatggaggcgtcgtcctgggacgcccttcgcaagcagg 145
             ||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 79799 ggagccatggaggcgtcttcttgggacgcccttcgcaagcagg 79757



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                              
Query: 536   tggatactgtgatatcacaagctcaagcaacactgggcgctctcatgtc 584
             |||||| |||||||||||| ||||||||||| || ||  ||||||||||
Sbjct: 75937 tggataatgtgatatcacatgctcaagcaacgctaggaactctcatgtc 75889

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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  283 bits (143), Expect = 3e-73
 Identities = 209/231 (90%)
 Strand = Plus / Minus

                                                                            
Query: 143      aggcgaggaggttggaagctcagttagacgaccaaatgattgcataccgtaaattggttt 202
                |||| |||||| | |||||||||||||| |||||||||| ||| |||||||||||| |||
Sbjct: 21394798 aggcaaggaggctagaagctcagttagatgaccaaatgagtgcttaccgtaaattgattt 21394739

                                                                            
Query: 203      ctatgaaatcagatggttcagagaatgatatcgagactgatatagaaagatcactaaagc 262
                | |||||||| |||||||| ||||||||||||||| | |||||||||||||| || ||||
Sbjct: 21394738 ccatgaaatctgatggttctgagaatgatatcgagtccgatatagaaagatcgctgaagc 21394679

                                                                            
Query: 263      aacttcagcaagtaaattctcaaatgcaaacctgggtatcgtcaggaggctcggaagttc 322
                |||||||||||||||||||||||||||| || |||||||| ||||||||||| ||||| |
Sbjct: 21394678 aacttcagcaagtaaattctcaaatgcagacatgggtatcatcaggaggctcagaagtcc 21394619

                                                                   
Query: 323      tttctcatacattaacccgtcatatggagattttgcaagaccttacacagg 373
                ||||||||||||| || |||||||||||||| |||||||||||||||||||
Sbjct: 21394618 tttctcatacattgactcgtcatatggagatattgcaagaccttacacagg 21394568



 Score =  131 bits (66), Expect = 3e-27
 Identities = 132/154 (85%)
 Strand = Plus / Minus

                                                                            
Query: 370      caggaattctatcggcttcgatcaagtctcagagtgaagcaacaacatgcttccctcctt 429
                |||||||||||||| || |||||||| || ||||  ||||||||||||||||| || |||
Sbjct: 21394348 caggaattctatcgcctccgatcaagccttagagcaaagcaacaacatgcttctcttctt 21394289

                                                                            
Query: 430      gacttgagagactttgacagagcaaagtttgacgtggaagagtctggggactcagaacaa 489
                ||||||||||| ||||||||||| |||||||| || ||||||  ||  ||||| || |||
Sbjct: 21394288 gacttgagagattttgacagagcgaagtttgatgttgaagagggtgctgactctgatcaa 21394229

                                                  
Query: 490      gctcttcttagagaacaagctgcaatcagcagga 523
                ||||| || | |||||||||||| ||||||||||
Sbjct: 21394228 gctctgctcaaagaacaagctgcgatcagcagga 21394195



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                        
Query: 106      gccatggaggcgtcgtcctgggacgcccttcgcaagcagg 145
                |||||||||||||| |||||||||||||| ||||||||||
Sbjct: 21395970 gccatggaggcgtcttcctgggacgccctccgcaagcagg 21395931



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                 
Query: 531      acaggtggatactgtgatatcacaagctcaagc 563
                |||| ||||||| ||||||||||||||||||||
Sbjct: 21393367 acagatggataccgtgatatcacaagctcaagc 21393335

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>dbj|AP004702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0524F03
          Length = 167696

 Score =  283 bits (143), Expect = 3e-73
 Identities = 209/231 (90%)
 Strand = Plus / Minus

                                                                         
Query: 143   aggcgaggaggttggaagctcagttagacgaccaaatgattgcataccgtaaattggttt 202
             |||| |||||| | |||||||||||||| |||||||||| ||| |||||||||||| |||
Sbjct: 94723 aggcaaggaggctagaagctcagttagatgaccaaatgagtgcttaccgtaaattgattt 94664

                                                                         
Query: 203   ctatgaaatcagatggttcagagaatgatatcgagactgatatagaaagatcactaaagc 262
             | |||||||| |||||||| ||||||||||||||| | |||||||||||||| || ||||
Sbjct: 94663 ccatgaaatctgatggttctgagaatgatatcgagtccgatatagaaagatcgctgaagc 94604

                                                                         
Query: 263   aacttcagcaagtaaattctcaaatgcaaacctgggtatcgtcaggaggctcggaagttc 322
             |||||||||||||||||||||||||||| || |||||||| ||||||||||| ||||| |
Sbjct: 94603 aacttcagcaagtaaattctcaaatgcagacatgggtatcatcaggaggctcagaagtcc 94544

                                                                
Query: 323   tttctcatacattaacccgtcatatggagattttgcaagaccttacacagg 373
             ||||||||||||| || |||||||||||||| |||||||||||||||||||
Sbjct: 94543 tttctcatacattgactcgtcatatggagatattgcaagaccttacacagg 94493



 Score =  131 bits (66), Expect = 3e-27
 Identities = 132/154 (85%)
 Strand = Plus / Minus

                                                                         
Query: 370   caggaattctatcggcttcgatcaagtctcagagtgaagcaacaacatgcttccctcctt 429
             |||||||||||||| || |||||||| || ||||  ||||||||||||||||| || |||
Sbjct: 94273 caggaattctatcgcctccgatcaagccttagagcaaagcaacaacatgcttctcttctt 94214

                                                                         
Query: 430   gacttgagagactttgacagagcaaagtttgacgtggaagagtctggggactcagaacaa 489
             ||||||||||| ||||||||||| |||||||| || ||||||  ||  ||||| || |||
Sbjct: 94213 gacttgagagattttgacagagcgaagtttgatgttgaagagggtgctgactctgatcaa 94154

                                               
Query: 490   gctcttcttagagaacaagctgcaatcagcagga 523
             ||||| || | |||||||||||| ||||||||||
Sbjct: 94153 gctctgctcaaagaacaagctgcgatcagcagga 94120



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                     
Query: 106   gccatggaggcgtcgtcctgggacgcccttcgcaagcagg 145
             |||||||||||||| |||||||||||||| ||||||||||
Sbjct: 95895 gccatggaggcgtcttcctgggacgccctccgcaagcagg 95856



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 531   acaggtggatactgtgatatcacaagctcaagc 563
             |||| ||||||| ||||||||||||||||||||
Sbjct: 93292 acagatggataccgtgatatcacaagctcaagc 93260

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>gb|AC162365.5| Mus musculus chromosome 19, clone RP23-75P11, complete sequence
          Length = 157286

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 262    caacttcagcaagtaaattctca 284
              |||||||||||||||||||||||
Sbjct: 116738 caacttcagcaagtaaattctca 116760

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>gb|AC113075.9| Mus musculus chromosome 19, clone RP23-278F24, complete sequence
          Length = 171837

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 262    caacttcagcaagtaaattctca 284
              |||||||||||||||||||||||
Sbjct: 107056 caacttcagcaagtaaattctca 107034

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>gb|AC140471.2| Mus musculus BAC clone RP24-400H5 from chromosome 19, complete sequence
          Length = 185153

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 317   aagttctttctcatacattaac 338
             ||||||||||||||||||||||
Sbjct: 79266 aagttctttctcatacattaac 79245

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>gb|AC162855.6| Mus musculus chromosome 19, clone RP24-166N3, complete sequence
          Length = 191900

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 317   aagttctttctcatacattaac 338
             ||||||||||||||||||||||
Sbjct: 27824 aagttctttctcatacattaac 27845

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>dbj|BS000080.1| Pan troglodytes chromosome 22 clone:PTB-090L14, map 22, complete
             sequences
          Length = 194210

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 257   taaagcaacttcagcaagtaaa 278
             ||||||||||||||||||||||
Sbjct: 10964 taaagcaacttcagcaagtaaa 10943

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>dbj|BS000079.1| Pan troglodytes chromosome 22 clone:RP43-047O12, map 22, complete
              sequences
          Length = 158933

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 257    taaagcaacttcagcaagtaaa 278
              ||||||||||||||||||||||
Sbjct: 109719 taaagcaacttcagcaagtaaa 109698

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>dbj|AP000959.3| Homo sapiens genomic DNA, chromosome 21 clone:RP11-797G14, complete
             sequence
          Length = 201112

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 257   taaagcaacttcagcaagtaaa 278
             ||||||||||||||||||||||
Sbjct: 16009 taaagcaacttcagcaagtaaa 15988

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>dbj|AP001684.1| Homo sapiens genomic DNA, chromosome 21q, section 28/105
          Length = 340000

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 257    taaagcaacttcagcaagtaaa 278
              ||||||||||||||||||||||
Sbjct: 290205 taaagcaacttcagcaagtaaa 290184

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>emb|AL133548.6| Human DNA sequence from clone RP11-235O14 on chromosome 9q13-21.2
              Contains a novel gene (FLJ20559), the OSTF1 gene for
              osteoclast stimulating factor 1 (OSF, SH3P2) and a CpG
              island, complete sequence
          Length = 153392

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 147    gaggaggttggaagctcagtt 167
              |||||||||||||||||||||
Sbjct: 117527 gaggaggttggaagctcagtt 117547

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>emb|AL035459.6|HS81G23 Human DNA sequence from clone RP1-81G23 on chromosome 20q12 Contains
            part of the PTPRT gene for protein tyrosine phosphatase
            receptor type T, ESTs, STS and GSSs, complete sequence
          Length = 50348

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 280  tctcaaatgcaaacctgggta 300
            |||||||||||||||||||||
Sbjct: 3804 tctcaaatgcaaacctgggta 3784

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>gb|AE004385.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, section 42
            of 93 of the complete chromosome
          Length = 10054

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 547  atatcacaagctcaagcaac 566
            ||||||||||||||||||||
Sbjct: 3266 atatcacaagctcaagcaac 3285

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>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence
          Length = 1471779

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 508     gctgcaatcagcaggaattc 527
               ||||||||||||||||||||
Sbjct: 1016991 gctgcaatcagcaggaattc 1016972

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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 508    gctgcaatcagcaggaattc 527
              ||||||||||||||||||||
Sbjct: 445112 gctgcaatcagcaggaattc 445093

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>gb|AC123769.5| Homo sapiens chromosome 17, clone RP11-1086I4, complete sequence
          Length = 190245

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 434    tgagagactttgacagagcaaagt 457
              |||||||||||||||| |||||||
Sbjct: 138467 tgagagactttgacagtgcaaagt 138490

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>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29
          Length = 303550

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    gacggcgccgccgaggagct 101
             ||||||||||||||||||||
Sbjct: 73802 gacggcgccgccgaggagct 73821

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>gb|AC024610.6| Homo sapiens chromosome 17, clone RP11-17M24, complete sequence
          Length = 176291

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 434   tgagagactttgacagagcaaagt 457
             |||||||||||||||| |||||||
Sbjct: 70494 tgagagactttgacagtgcaaagt 70517

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>gb|AC083837.4| Homo sapiens chromosome 8, clone RP11-79H23, complete sequence
          Length = 166114

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 350   agattttgcaagaccttaca 369
             ||||||||||||||||||||
Sbjct: 98164 agattttgcaagaccttaca 98183

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>gb|AC090686.4| Homo sapiens chromosome 8, clone RP11-771F20, complete sequence
          Length = 197065

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 221   cagagaatgatatcgagactgatataga 248
             ||||||||||||| |||| |||||||||
Sbjct: 11096 cagagaatgatattgagaatgatataga 11123

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>emb|BX284113.5| Zebrafish DNA sequence from clone CH211-247M3 in linkage group 7,
             complete sequence
          Length = 162808

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 247   gaaagatcactaaagcaact 266
             ||||||||||||||||||||
Sbjct: 33017 gaaagatcactaaagcaact 32998

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>gb|AC093641.5| Homo sapiens BAC clone RP11-335N7 from 2, complete sequence
          Length = 43746

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 397   ctcagagtgaagcaacaaca 416
             ||||||||||||||||||||
Sbjct: 13690 ctcagagtgaagcaacaaca 13671

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>ref|XM_214825.3| PREDICTED: Rattus norvegicus neuro-oncological ventral antigen 2
            (predicted) (Nova2_predicted), mRNA
          Length = 1791

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 39   tccagccgcgccccccgctc 58
            ||||||||||||||||||||
Sbjct: 1119 tccagccgcgccccccgctc 1100

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>gb|AY106278.1| Zea mays PCO137999 mRNA sequence
          Length = 1382

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 82  gacggcgccgccgaggagct 101
           ||||||||||||||||||||
Sbjct: 170 gacggcgccgccgaggagct 189

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>gb|AC007751.3|AC007751 Homo sapiens, clone 5_A_11, complete sequence
          Length = 158963

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 221   cagagaatgatatcgagactgatataga 248
             ||||||||||||| |||| |||||||||
Sbjct: 31724 cagagaatgatattgagaatgatataga 31697

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>dbj|AP006544.1| Homo sapiens genomic DNA, chromosome 8q22.3, clone: KB1575F09, complete
             sequence
          Length = 126600

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 221   cagagaatgatatcgagactgatataga 248
             ||||||||||||| |||| |||||||||
Sbjct: 64633 cagagaatgatattgagaatgatataga 64660

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>gb|AC124354.4| Mus musculus BAC clone RP24-481K12 from 12, complete sequence
          Length = 180819

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 273    agtaaattctcaaatgcaaa 292
              ||||||||||||||||||||
Sbjct: 152950 agtaaattctcaaatgcaaa 152969

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>emb|CT030643.5| Mouse DNA sequence from clone RP23-348M4 on chromosome 12, complete
              sequence
          Length = 209600

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 273    agtaaattctcaaatgcaaa 292
              ||||||||||||||||||||
Sbjct: 197363 agtaaattctcaaatgcaaa 197344

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>emb|AL807800.7| Mouse DNA sequence from clone RP23-438D2 on chromosome 2, complete
              sequence
          Length = 176808

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 497    ttagagaacaagctgcaatc 516
              ||||||||||||||||||||
Sbjct: 134465 ttagagaacaagctgcaatc 134484

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>dbj|AB022197.1| Halocynthia roretzi mRNA for homologue of mammlian thyroid
            peroxidase, complete cds
          Length = 3179

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 473  ctggggactcagaacaagctcttc 496
            |||||||||||||||||| |||||
Sbjct: 2589 ctggggactcagaacaagttcttc 2566


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,555,823
Number of Sequences: 3902068
Number of extensions: 4555823
Number of successful extensions: 102526
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102336
Number of HSP's gapped (non-prelim): 190
length of query: 594
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 571
effective length of database: 17,143,297,704
effective search space: 9788822988984
effective search space used: 9788822988984
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result