ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags26m10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK072692.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140I22, full insert sequence Length = 1706 Score = 147 bits (74), Expect = 5e-32 Identities = 227/278 (81%) Strand = Plus / Plus Query: 4 ggactcagacttatcggagatgacaaggcagagcaaattcttgaagcagtgagggatgcc 63 |||||||||||||| |||||||| ||||| | || ||||||||||| || ||||||| Sbjct: 411 ggactcagacttattggagatgaaaaggcgaaccagattcttgaagcggttagggatgta 470 Query: 64 gtccacagcaagaccaaattccagtacaatcccagttggatcaatgttctcaaggggtct 123 ||||||| ||||| ||||| ||||| || || | |||||||| ||||| |||| || Sbjct: 471 gtccacaccaagagcaaatatcagtataacccgaactggatcaacgttcttgagggatcc 530 Query: 124 caggaaggatcttacctatgggttgctctgaattacctgctgggtaaactgggaggagac 183 |||||||| || ||| ||||||||||||||||||| || |||| |||| ||||||||||| Sbjct: 531 caggaagggtcatacatatgggttgctctgaattatctcctggataaattgggaggagac 590 Query: 184 tactccaagacggtggcagtgatcgaccttggaggtgggtccgtgcagatggcatatgcc 243 ||||| || || || | ||| | || ||||||||||| ||||| || |||||||| ||| Sbjct: 591 tactctaaaaccgtaggggtggttgatcttggaggtggatccgtacaaatggcatacgcc 650 Query: 244 atctcagcgaacgccgcagctgccgctcccacggtgcc 281 |||||| | ||| |||| ||| ||||||| | |||||| Sbjct: 651 atctcatcaaacaccgctgctaccgctccaaaggtgcc 688 Score = 44.1 bits (22), Expect = 0.52 Identities = 49/58 (84%) Strand = Plus / Plus Query: 310 gagtacctcaaaggaaaagattacaacgtctacgttcacagctacttgcactacggcg 367 ||||| ||||| ||||||||||| ||| | || || |||||||| |||||||| |||| Sbjct: 717 gagtatctcaagggaaaagattataacatttatgtgcacagctatttgcactatggcg 774
>gb|BT018406.1| Zea mays clone EL01N0326A05.d mRNA sequence Length = 1460 Score = 131 bits (66), Expect = 3e-27 Identities = 117/134 (87%) Strand = Plus / Plus Query: 64 gtccacagcaagaccaaattccagtacaatcccagttggatcaatgttctcaaggggtct 123 ||||||| |||| ||||||||||||||| |||| |||||||||||||| |||||||| Sbjct: 280 gtccacaagaagagcaaattccagtacaagcccaactggatcaatgttcttgaggggtct 339 Query: 124 caggaaggatcttacctatgggttgctctgaattacctgctgggtaaactgggaggagac 183 ||||||| ||| ||||||||||| |||||||||||| |||||| |||||||||||| || Sbjct: 340 caggaagcatcctacctatgggtcgctctgaattacttgctggataaactgggaggggag 399 Query: 184 tactccaagacggt 197 || ||| ||||||| Sbjct: 400 tattcccagacggt 413 Score = 48.1 bits (24), Expect = 0.034 Identities = 54/64 (84%) Strand = Plus / Plus Query: 398 ccaaaaacggaccagtcagctactgcgtgctgcgcggatacgatggcaaatacacctaca 457 |||| ||||||||| |||||| |||| |||||||||||| ||| ||||| ||||||| Sbjct: 614 ccaagaacggaccattcagctcctgcatgctgcgcggatttagtggtaaatatacctaca 673 Query: 458 acgg 461 |||| Sbjct: 674 acgg 677
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 109 bits (55), Expect = 1e-20 Identities = 184/227 (81%) Strand = Plus / Plus Query: 55 agggatgccgtccacagcaagaccaaattccagtacaatcccagttggatcaatgttctc 114 ||||||| ||||||| ||||| ||||| ||||| || || | |||||||| ||||| Sbjct: 1107504 agggatgtagtccacaccaagagcaaatatcagtataacccgaactggatcaacgttctt 1107563 Query: 115 aaggggtctcaggaaggatcttacctatgggttgctctgaattacctgctgggtaaactg 174 |||| || |||||||| || ||| ||||||||||||||||||| || |||| |||| || Sbjct: 1107564 gagggatcccaggaagggtcatacatatgggttgctctgaattatctcctggataaattg 1107623 Query: 175 ggaggagactactccaagacggtggcagtgatcgaccttggaggtgggtccgtgcagatg 234 |||||||||||||| || || || | ||| | || ||||||||||| ||||| || ||| Sbjct: 1107624 ggaggagactactctaaaaccgtaggggtggttgatcttggaggtggatccgtacaaatg 1107683 Query: 235 gcatatgccatctcagcgaacgccgcagctgccgctcccacggtgcc 281 ||||| ||||||||| | ||| |||| ||| ||||||| | |||||| Sbjct: 1107684 gcatacgccatctcatcaaacaccgctgctaccgctccaaaggtgcc 1107730 Score = 75.8 bits (38), Expect = 1e-10 Identities = 149/186 (80%) Strand = Plus / Plus Query: 64 gtccacagcaagaccaaattccagtacaatcccagttggatcaatgttctcaaggggtct 123 ||||||| ||||||||| ||||| |||||||| | ||||| |||||||| | || ||| Sbjct: 1131101 gtccacaccaagaccaagttccaatacaatccaaactggattaatgttcttagtggatct 1131160 Query: 124 caggaaggatcttacctatgggttgctctgaattacctgctgggtaaactgggaggagac 183 || ||| |||||||| | |||||||| || || || || ||| || | | ||||| ||| Sbjct: 1131161 caagaatgatcttacatgtgggttgcacttaactatttgttggatagattaggaggtgac 1131220 Query: 184 tactccaagacggtggcagtgatcgaccttggaggtgggtccgtgcagatggcatatgcc 243 |||||||| || |||| ||||| || || ||||| || |||||||| ||||| |||||| Sbjct: 1131221 tactccaaaactgtgggtgtgattgatctcggaggcggatccgtgcaaatggcctatgcc 1131280 Query: 244 atctca 249 |||||| Sbjct: 1131281 atctca 1131286 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 1 gctggactcagacttatcggagatgacaag 30 ||||||||||||||||| |||||||||||| Sbjct: 1130958 gctggactcagacttattggagatgacaag 1130987 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Plus Query: 560 ccaagaactgcaccttcaacggcgcgtggaacggcggcgg 599 |||| ||||||| ||||||||| | ||||||||||||||| Sbjct: 1132258 ccaacaactgcagcttcaacggagtgtggaacggcggcgg 1132297 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 4 ggactcagacttatcggagatgacaaggcagagcaaattcttgaagc 50 |||||||||||||| |||||||| ||||| | || ||||||||||| Sbjct: 1107321 ggactcagacttattggagatgaaaaggcgaaccagattcttgaagc 1107367
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 109 bits (55), Expect = 1e-20 Identities = 184/227 (81%) Strand = Plus / Plus Query: 55 agggatgccgtccacagcaagaccaaattccagtacaatcccagttggatcaatgttctc 114 ||||||| ||||||| ||||| ||||| ||||| || || | |||||||| ||||| Sbjct: 1107504 agggatgtagtccacaccaagagcaaatatcagtataacccgaactggatcaacgttctt 1107563 Query: 115 aaggggtctcaggaaggatcttacctatgggttgctctgaattacctgctgggtaaactg 174 |||| || |||||||| || ||| ||||||||||||||||||| || |||| |||| || Sbjct: 1107564 gagggatcccaggaagggtcatacatatgggttgctctgaattatctcctggataaattg 1107623 Query: 175 ggaggagactactccaagacggtggcagtgatcgaccttggaggtgggtccgtgcagatg 234 |||||||||||||| || || || | ||| | || ||||||||||| ||||| || ||| Sbjct: 1107624 ggaggagactactctaaaaccgtaggggtggttgatcttggaggtggatccgtacaaatg 1107683 Query: 235 gcatatgccatctcagcgaacgccgcagctgccgctcccacggtgcc 281 ||||| ||||||||| | ||| |||| ||| ||||||| | |||||| Sbjct: 1107684 gcatacgccatctcatcaaacaccgctgctaccgctccaaaggtgcc 1107730 Score = 75.8 bits (38), Expect = 1e-10 Identities = 149/186 (80%) Strand = Plus / Plus Query: 64 gtccacagcaagaccaaattccagtacaatcccagttggatcaatgttctcaaggggtct 123 ||||||| ||||||||| ||||| |||||||| | ||||| |||||||| | || ||| Sbjct: 1131101 gtccacaccaagaccaagttccaatacaatccaaactggattaatgttcttagtggatct 1131160 Query: 124 caggaaggatcttacctatgggttgctctgaattacctgctgggtaaactgggaggagac 183 || ||| |||||||| | |||||||| || || || || ||| || | | ||||| ||| Sbjct: 1131161 caagaatgatcttacatgtgggttgcacttaactatttgttggatagattaggaggtgac 1131220 Query: 184 tactccaagacggtggcagtgatcgaccttggaggtgggtccgtgcagatggcatatgcc 243 |||||||| || |||| ||||| || || ||||| || |||||||| ||||| |||||| Sbjct: 1131221 tactccaaaactgtgggtgtgattgatctcggaggcggatccgtgcaaatggcctatgcc 1131280 Query: 244 atctca 249 |||||| Sbjct: 1131281 atctca 1131286 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 1 gctggactcagacttatcggagatgacaag 30 ||||||||||||||||| |||||||||||| Sbjct: 1130958 gctggactcagacttattggagatgacaag 1130987 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Plus Query: 560 ccaagaactgcaccttcaacggcgcgtggaacggcggcgg 599 |||| ||||||| ||||||||| | ||||||||||||||| Sbjct: 1132258 ccaacaactgcagcttcaacggagtgtggaacggcggcgg 1132297 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 4 ggactcagacttatcggagatgacaaggcagagcaaattcttgaagc 50 |||||||||||||| |||||||| ||||| | || ||||||||||| Sbjct: 1107321 ggactcagacttattggagatgaaaaggcgaaccagattcttgaagc 1107367
>emb|BX000495.1|CNS08CDL Oryza sativa chromosome 12, . BAC OSJNBb0119L20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 126974 Score = 109 bits (55), Expect = 1e-20 Identities = 184/227 (81%) Strand = Plus / Plus Query: 55 agggatgccgtccacagcaagaccaaattccagtacaatcccagttggatcaatgttctc 114 ||||||| ||||||| ||||| ||||| ||||| || || | |||||||| ||||| Sbjct: 46487 agggatgtagtccacaccaagagcaaatatcagtataacccgaactggatcaacgttctt 46546 Query: 115 aaggggtctcaggaaggatcttacctatgggttgctctgaattacctgctgggtaaactg 174 |||| || |||||||| || ||| ||||||||||||||||||| || |||| |||| || Sbjct: 46547 gagggatcccaggaagggtcatacatatgggttgctctgaattatctcctggataaattg 46606 Query: 175 ggaggagactactccaagacggtggcagtgatcgaccttggaggtgggtccgtgcagatg 234 |||||||||||||| || || || | ||| | || ||||||||||| ||||| || ||| Sbjct: 46607 ggaggagactactctaaaaccgtaggggtggttgatcttggaggtggatccgtacaaatg 46666 Query: 235 gcatatgccatctcagcgaacgccgcagctgccgctcccacggtgcc 281 ||||| ||||||||| | ||| |||| ||| ||||||| | |||||| Sbjct: 46667 gcatacgccatctcatcaaacaccgctgctaccgctccaaaggtgcc 46713 Score = 75.8 bits (38), Expect = 1e-10 Identities = 149/186 (80%) Strand = Plus / Plus Query: 64 gtccacagcaagaccaaattccagtacaatcccagttggatcaatgttctcaaggggtct 123 ||||||| ||||||||| ||||| |||||||| | ||||| |||||||| | || ||| Sbjct: 70084 gtccacaccaagaccaagttccaatacaatccaaactggattaatgttcttagtggatct 70143 Query: 124 caggaaggatcttacctatgggttgctctgaattacctgctgggtaaactgggaggagac 183 || ||| |||||||| | |||||||| || || || || ||| || | | ||||| ||| Sbjct: 70144 caagaatgatcttacatgtgggttgcacttaactatttgttggatagattaggaggtgac 70203 Query: 184 tactccaagacggtggcagtgatcgaccttggaggtgggtccgtgcagatggcatatgcc 243 |||||||| || |||| ||||| || || ||||| || |||||||| ||||| |||||| Sbjct: 70204 tactccaaaactgtgggtgtgattgatctcggaggcggatccgtgcaaatggcctatgcc 70263 Query: 244 atctca 249 |||||| Sbjct: 70264 atctca 70269 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 1 gctggactcagacttatcggagatgacaag 30 ||||||||||||||||| |||||||||||| Sbjct: 69941 gctggactcagacttattggagatgacaag 69970 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Plus Query: 560 ccaagaactgcaccttcaacggcgcgtggaacggcggcgg 599 |||| ||||||| ||||||||| | ||||||||||||||| Sbjct: 71241 ccaacaactgcagcttcaacggagtgtggaacggcggcgg 71280 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 4 ggactcagacttatcggagatgacaaggcagagcaaattcttgaagc 50 |||||||||||||| |||||||| ||||| | || ||||||||||| Sbjct: 46304 ggactcagacttattggagatgaaaaggcgaaccagattcttgaagc 46350
>gb|AC123519.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0017B18, complete sequence Length = 150279 Score = 99.6 bits (50), Expect = 1e-17 Identities = 152/186 (81%) Strand = Plus / Plus Query: 64 gtccacagcaagaccaaattccagtacaatcccagttggatcaatgttctcaaggggtct 123 ||||||| ||||||||| ||||| |||||||| | ||||| |||||||| | || ||| Sbjct: 121721 gtccacaccaagaccaagttccaatacaatccaaactggattaatgttcttagtggatct 121780 Query: 124 caggaaggatcttacctatgggttgctctgaattacctgctgggtaaactgggaggagac 183 || |||||||||||| | |||||||| || || || |||||| || | | ||||| ||| Sbjct: 121781 caagaaggatcttacatgtgggttgcacttaactatttgctggatagattaggaggtgac 121840 Query: 184 tactccaagacggtggcagtgatcgaccttggaggtgggtccgtgcagatggcatatgcc 243 |||||||| || || | |||||| || || |||||||| |||||||| ||||| |||||| Sbjct: 121841 tactccaaaactgtaggagtgattgatctcggaggtggatccgtgcaaatggcctatgcc 121900 Query: 244 atctca 249 |||||| Sbjct: 121901 atctca 121906 Score = 91.7 bits (46), Expect = 2e-15 Identities = 151/186 (81%) Strand = Plus / Plus Query: 64 gtccacagcaagaccaaattccagtacaatcccagttggatcaatgttctcaaggggtct 123 ||||||| ||||| |||||| ||||||||||| | |||||||||||||| | ||| ||| Sbjct: 101733 gtccacaccaagagcaaatttcagtacaatccaaactggatcaatgttcttacgggatct 101792 Query: 124 caggaaggatcttacctatgggttgctctgaattacctgctgggtaaactgggaggagac 183 || |||||||||||| | ||||||||||| || || || || | || |||||| | ||| Sbjct: 101793 caagaaggatcttacatgtgggttgctcttaactatcttcttgatagactgggtgaagat 101852 Query: 184 tactccaagacggtggcagtgatcgaccttggaggtgggtccgtgcagatggcatatgcc 243 ||||| || || || | ||||| || ||||||||||| ||||| || ||||| |||||| Sbjct: 101853 tactcgaaaacagtaggcgtgattgatcttggaggtggatccgtacaaatggcctatgcc 101912 Query: 244 atctca 249 ||||| Sbjct: 101913 gtctca 101918 Score = 83.8 bits (42), Expect = 6e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 100 tggatcaatgttctcaaggggtctcaggaaggatcttacctatgggttgctctgaattac 159 |||||||| ||||| |||| || ||||||||||| ||| | ||||||||||||||||| Sbjct: 74157 tggatcaacgttcttgagggatcccaggaaggatcatacatgtgggttgctctgaattat 74216 Query: 160 ctgctgggtaaactgggaggagactactccaagacggtggcagtgatcgaccttggaggt 219 || |||| |||| ||||||||||||||| || || || | ||| | || ||||||||| Sbjct: 74217 ctcctggataaattgggaggagactactttaaaaccgtaggggtggttgatcttggaggt 74276 Query: 220 gggtccgtgcagatggcatatgccat 245 || ||||| || |||||||| ||||| Sbjct: 74277 ggatccgtacaaatggcatacgccat 74302 Score = 77.8 bits (39), Expect = 4e-11 Identities = 117/143 (81%) Strand = Plus / Plus Query: 107 atgttctcaaggggtctcaggaaggatcttacctatgggttgctctgaattacctgctgg 166 ||||||| |||| || ||| ||||||| ||| | ||||||||||||||||| ||||||| Sbjct: 104624 atgttcttgagggatcccagcaaggatcatacatgtgggttgctctgaattatctgctgg 104683 Query: 167 gtaaactgggaggagactactccaagacggtggcagtgatcgaccttggaggtgggtccg 226 |||| |||||||||||||||| || || || | ||| | || |||||||||| |||| Sbjct: 104684 ataaattgggaggagactactctaaaactgtaggggtggttgatattggaggtggatccg 104743 Query: 227 tgcagatggcatatgccatctca 249 | | |||||||| ||||||||| Sbjct: 104744 tataaatggcatacgccatctca 104766 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 1 gctggactcagacttatcggagatgacaaggcagagcaaattcttgaagc 50 ||||||||||||||||| ||||||||||||||| | || ||||||||||| Sbjct: 121571 gctggactcagacttattggagatgacaaggcaaaccagattcttgaagc 121620 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 442 ggcaaatacacctacaacggggagcaatacgacgccatagcagcaccgcaagg 494 ||||||| |||||||||||||||||| ||||| || || |||||||| ||||| Sbjct: 102552 ggcaaattcacctacaacggggagcagtacgaagcaatggcagcaccacaagg 102604 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 4 ggactcagacttatcggagatgacaaggcagagcaaattcttgaagc 50 |||||||||||||| |||||||| ||||| | |||||||||||||| Sbjct: 73929 ggactcagacttattggagatgaaaaggcgaaccaaattcttgaagc 73975 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 568 tgcaccttcaacggcgcgtggaacggcggcggcg 601 |||| ||||||||||| ||||||||||||||||| Sbjct: 102678 tgcagcttcaacggcgtgtggaacggcggcggcg 102711 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 1 gctggactcagacttatcggagatgacaaggcagagcaaattcttgaagc 50 |||||||||| |||||| |||||||| |||||| | || ||||||||||| Sbjct: 101590 gctggactcatacttattggagatgaaaaggcaaaccagattcttgaagc 101639 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Plus Query: 560 ccaagaactgcaccttcaacggcgcgtggaacggcggcgg 599 |||| ||||||| ||||||||| | ||||||||||||||| Sbjct: 122869 ccaacaactgcagcttcaacggagtgtggaacggcggcgg 122908 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 560 ccaagaactgcaccttcaacggcgcgtggaacgg 593 |||||||||||| ||||||||||| |||||||| Sbjct: 75039 ccaagaactgcagcttcaacggcgtctggaacgg 75072
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 99.6 bits (50), Expect = 1e-17 Identities = 152/186 (81%) Strand = Plus / Plus Query: 64 gtccacagcaagaccaaattccagtacaatcccagttggatcaatgttctcaaggggtct 123 ||||||| ||||||||| ||||| |||||||| | ||||| |||||||| | || ||| Sbjct: 1225915 gtccacaccaagaccaagttccaatacaatccaaactggattaatgttcttagtggatct 1225974 Query: 124 caggaaggatcttacctatgggttgctctgaattacctgctgggtaaactgggaggagac 183 || |||||||||||| | |||||||| || || || |||||| || | | ||||| ||| Sbjct: 1225975 caagaaggatcttacatgtgggttgcacttaactatttgctggatagattaggaggtgac 1226034 Query: 184 tactccaagacggtggcagtgatcgaccttggaggtgggtccgtgcagatggcatatgcc 243 |||||||| || || | |||||| || || |||||||| |||||||| ||||| |||||| Sbjct: 1226035 tactccaaaactgtaggagtgattgatctcggaggtggatccgtgcaaatggcctatgcc 1226094 Query: 244 atctca 249 |||||| Sbjct: 1226095 atctca 1226100 Score = 91.7 bits (46), Expect = 2e-15 Identities = 151/186 (81%) Strand = Plus / Plus Query: 64 gtccacagcaagaccaaattccagtacaatcccagttggatcaatgttctcaaggggtct 123 ||||||| ||||| |||||| ||||||||||| | |||||||||||||| | ||| ||| Sbjct: 1205927 gtccacaccaagagcaaatttcagtacaatccaaactggatcaatgttcttacgggatct 1205986 Query: 124 caggaaggatcttacctatgggttgctctgaattacctgctgggtaaactgggaggagac 183 || |||||||||||| | ||||||||||| || || || || | || |||||| | ||| Sbjct: 1205987 caagaaggatcttacatgtgggttgctcttaactatcttcttgatagactgggtgaagat 1206046 Query: 184 tactccaagacggtggcagtgatcgaccttggaggtgggtccgtgcagatggcatatgcc 243 ||||| || || || | ||||| || ||||||||||| ||||| || ||||| |||||| Sbjct: 1206047 tactcgaaaacagtaggcgtgattgatcttggaggtggatccgtacaaatggcctatgcc 1206106 Query: 244 atctca 249 ||||| Sbjct: 1206107 gtctca 1206112 Score = 83.8 bits (42), Expect = 6e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 100 tggatcaatgttctcaaggggtctcaggaaggatcttacctatgggttgctctgaattac 159 |||||||| ||||| |||| || ||||||||||| ||| | ||||||||||||||||| Sbjct: 1178351 tggatcaacgttcttgagggatcccaggaaggatcatacatgtgggttgctctgaattat 1178410 Query: 160 ctgctgggtaaactgggaggagactactccaagacggtggcagtgatcgaccttggaggt 219 || |||| |||| ||||||||||||||| || || || | ||| | || ||||||||| Sbjct: 1178411 ctcctggataaattgggaggagactactttaaaaccgtaggggtggttgatcttggaggt 1178470 Query: 220 gggtccgtgcagatggcatatgccat 245 || ||||| || |||||||| ||||| Sbjct: 1178471 ggatccgtacaaatggcatacgccat 1178496 Score = 77.8 bits (39), Expect = 4e-11 Identities = 117/143 (81%) Strand = Plus / Plus Query: 107 atgttctcaaggggtctcaggaaggatcttacctatgggttgctctgaattacctgctgg 166 ||||||| |||| || ||| ||||||| ||| | ||||||||||||||||| ||||||| Sbjct: 1208818 atgttcttgagggatcccagcaaggatcatacatgtgggttgctctgaattatctgctgg 1208877 Query: 167 gtaaactgggaggagactactccaagacggtggcagtgatcgaccttggaggtgggtccg 226 |||| |||||||||||||||| || || || | ||| | || |||||||||| |||| Sbjct: 1208878 ataaattgggaggagactactctaaaactgtaggggtggttgatattggaggtggatccg 1208937 Query: 227 tgcagatggcatatgccatctca 249 | | |||||||| ||||||||| Sbjct: 1208938 tataaatggcatacgccatctca 1208960 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 1 gctggactcagacttatcggagatgacaaggcagagcaaattcttgaagc 50 ||||||||||||||||| ||||||||||||||| | || ||||||||||| Sbjct: 1225765 gctggactcagacttattggagatgacaaggcaaaccagattcttgaagc 1225814 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 564 gaactgcaccttcaacggcgcgtggaacggcggcggcg 601 |||||||| ||||||||||| ||||||||||||||||| Sbjct: 13850926 gaactgcagcttcaacggcgtgtggaacggcggcggcg 13850889 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 564 gaactgcaccttcaacggcgcgtggaacggcggcggcg 601 |||||||| ||||||||||| ||||||||||||||||| Sbjct: 13814444 gaactgcagcttcaacggcgtgtggaacggcggcggcg 13814407 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 442 ggcaaatacacctacaacggggagcaatacgacgccatagcagcaccgcaagg 494 ||||||| |||||||||||||||||| ||||| || || |||||||| ||||| Sbjct: 1206746 ggcaaattcacctacaacggggagcagtacgaagcaatggcagcaccacaagg 1206798 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 4 ggactcagacttatcggagatgacaaggcagagcaaattcttgaagc 50 |||||||||||||| |||||||| ||||| | |||||||||||||| Sbjct: 1178123 ggactcagacttattggagatgaaaaggcgaaccaaattcttgaagc 1178169 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 1 gctggactcagacttatcggagatgacaaggcagagcaaattcttgaagc 50 ||||| || ||||| || |||||||| ||| ||||||||||||||||||| Sbjct: 13852311 gctggtctaagactgattggagatgagaagtcagagcaaattcttgaagc 13852262 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 1 gctggactcagacttatcggagatgacaaggcagagcaaattcttgaagc 50 ||||| || ||||| || |||||||| ||| ||||||||||||||||||| Sbjct: 13815829 gctggtctaagactgattggagatgagaagtcagagcaaattcttgaagc 13815780 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 568 tgcaccttcaacggcgcgtggaacggcggcggcg 601 |||| ||||||||||| ||||||||||||||||| Sbjct: 1206872 tgcagcttcaacggcgtgtggaacggcggcggcg 1206905 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 1 gctggactcagacttatcggagatgacaaggcagagcaaattcttgaagc 50 |||||||||| |||||| |||||||| |||||| | || ||||||||||| Sbjct: 1205784 gctggactcatacttattggagatgaaaaggcaaaccagattcttgaagc 1205833 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Plus Query: 560 ccaagaactgcaccttcaacggcgcgtggaacggcggcgg 599 |||| ||||||| ||||||||| | ||||||||||||||| Sbjct: 1227063 ccaacaactgcagcttcaacggagtgtggaacggcggcgg 1227102 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 560 ccaagaactgcaccttcaacggcgcgtggaacgg 593 |||||||||||| ||||||||||| |||||||| Sbjct: 1179233 ccaagaactgcagcttcaacggcgtctggaacgg 1179266 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 64 gtccacagcaagaccaaattccagtacaa 92 ||||||||||||| ||| ||||||||||| Sbjct: 13852121 gtccacagcaagagcaatttccagtacaa 13852093 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 64 gtccacagcaagaccaaattccagtacaa 92 ||||||||||||| ||| ||||||||||| Sbjct: 13815639 gtccacagcaagagcaatttccagtacaa 13815611
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 99.6 bits (50), Expect = 1e-17 Identities = 152/186 (81%) Strand = Plus / Plus Query: 64 gtccacagcaagaccaaattccagtacaatcccagttggatcaatgttctcaaggggtct 123 ||||||| ||||||||| ||||| |||||||| | ||||| |||||||| | || ||| Sbjct: 1223636 gtccacaccaagaccaagttccaatacaatccaaactggattaatgttcttagtggatct 1223695 Query: 124 caggaaggatcttacctatgggttgctctgaattacctgctgggtaaactgggaggagac 183 || |||||||||||| | |||||||| || || || |||||| || | | ||||| ||| Sbjct: 1223696 caagaaggatcttacatgtgggttgcacttaactatttgctggatagattaggaggtgac 1223755 Query: 184 tactccaagacggtggcagtgatcgaccttggaggtgggtccgtgcagatggcatatgcc 243 |||||||| || || | |||||| || || |||||||| |||||||| ||||| |||||| Sbjct: 1223756 tactccaaaactgtaggagtgattgatctcggaggtggatccgtgcaaatggcctatgcc 1223815 Query: 244 atctca 249 |||||| Sbjct: 1223816 atctca 1223821 Score = 91.7 bits (46), Expect = 2e-15 Identities = 151/186 (81%) Strand = Plus / Plus Query: 64 gtccacagcaagaccaaattccagtacaatcccagttggatcaatgttctcaaggggtct 123 ||||||| ||||| |||||| ||||||||||| | |||||||||||||| | ||| ||| Sbjct: 1203648 gtccacaccaagagcaaatttcagtacaatccaaactggatcaatgttcttacgggatct 1203707 Query: 124 caggaaggatcttacctatgggttgctctgaattacctgctgggtaaactgggaggagac 183 || |||||||||||| | ||||||||||| || || || || | || |||||| | ||| Sbjct: 1203708 caagaaggatcttacatgtgggttgctcttaactatcttcttgatagactgggtgaagat 1203767 Query: 184 tactccaagacggtggcagtgatcgaccttggaggtgggtccgtgcagatggcatatgcc 243 ||||| || || || | ||||| || ||||||||||| ||||| || ||||| |||||| Sbjct: 1203768 tactcgaaaacagtaggcgtgattgatcttggaggtggatccgtacaaatggcctatgcc 1203827 Query: 244 atctca 249 ||||| Sbjct: 1203828 gtctca 1203833 Score = 83.8 bits (42), Expect = 6e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 100 tggatcaatgttctcaaggggtctcaggaaggatcttacctatgggttgctctgaattac 159 |||||||| ||||| |||| || ||||||||||| ||| | ||||||||||||||||| Sbjct: 1176072 tggatcaacgttcttgagggatcccaggaaggatcatacatgtgggttgctctgaattat 1176131 Query: 160 ctgctgggtaaactgggaggagactactccaagacggtggcagtgatcgaccttggaggt 219 || |||| |||| ||||||||||||||| || || || | ||| | || ||||||||| Sbjct: 1176132 ctcctggataaattgggaggagactactttaaaaccgtaggggtggttgatcttggaggt 1176191 Query: 220 gggtccgtgcagatggcatatgccat 245 || ||||| || |||||||| ||||| Sbjct: 1176192 ggatccgtacaaatggcatacgccat 1176217 Score = 77.8 bits (39), Expect = 4e-11 Identities = 117/143 (81%) Strand = Plus / Plus Query: 107 atgttctcaaggggtctcaggaaggatcttacctatgggttgctctgaattacctgctgg 166 ||||||| |||| || ||| ||||||| ||| | ||||||||||||||||| ||||||| Sbjct: 1206539 atgttcttgagggatcccagcaaggatcatacatgtgggttgctctgaattatctgctgg 1206598 Query: 167 gtaaactgggaggagactactccaagacggtggcagtgatcgaccttggaggtgggtccg 226 |||| |||||||||||||||| || || || | ||| | || |||||||||| |||| Sbjct: 1206599 ataaattgggaggagactactctaaaactgtaggggtggttgatattggaggtggatccg 1206658 Query: 227 tgcagatggcatatgccatctca 249 | | |||||||| ||||||||| Sbjct: 1206659 tataaatggcatacgccatctca 1206681 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 1 gctggactcagacttatcggagatgacaaggcagagcaaattcttgaagc 50 ||||||||||||||||| ||||||||||||||| | || ||||||||||| Sbjct: 1223486 gctggactcagacttattggagatgacaaggcaaaccagattcttgaagc 1223535 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 564 gaactgcaccttcaacggcgcgtggaacggcggcggcg 601 |||||||| ||||||||||| ||||||||||||||||| Sbjct: 13932928 gaactgcagcttcaacggcgtgtggaacggcggcggcg 13932891 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 564 gaactgcaccttcaacggcgcgtggaacggcggcggcg 601 |||||||| ||||||||||| ||||||||||||||||| Sbjct: 13896446 gaactgcagcttcaacggcgtgtggaacggcggcggcg 13896409 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 442 ggcaaatacacctacaacggggagcaatacgacgccatagcagcaccgcaagg 494 ||||||| |||||||||||||||||| ||||| || || |||||||| ||||| Sbjct: 1204467 ggcaaattcacctacaacggggagcagtacgaagcaatggcagcaccacaagg 1204519 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 4 ggactcagacttatcggagatgacaaggcagagcaaattcttgaagc 50 |||||||||||||| |||||||| ||||| | |||||||||||||| Sbjct: 1175844 ggactcagacttattggagatgaaaaggcgaaccaaattcttgaagc 1175890 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 1 gctggactcagacttatcggagatgacaaggcagagcaaattcttgaagc 50 ||||| || ||||| || |||||||| ||| ||||||||||||||||||| Sbjct: 13934313 gctggtctaagactgattggagatgagaagtcagagcaaattcttgaagc 13934264 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 1 gctggactcagacttatcggagatgacaaggcagagcaaattcttgaagc 50 ||||| || ||||| || |||||||| ||| ||||||||||||||||||| Sbjct: 13897831 gctggtctaagactgattggagatgagaagtcagagcaaattcttgaagc 13897782 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 568 tgcaccttcaacggcgcgtggaacggcggcggcg 601 |||| ||||||||||| ||||||||||||||||| Sbjct: 1204593 tgcagcttcaacggcgtgtggaacggcggcggcg 1204626 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 1 gctggactcagacttatcggagatgacaaggcagagcaaattcttgaagc 50 |||||||||| |||||| |||||||| |||||| | || ||||||||||| Sbjct: 1203505 gctggactcatacttattggagatgaaaaggcaaaccagattcttgaagc 1203554 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Plus Query: 560 ccaagaactgcaccttcaacggcgcgtggaacggcggcgg 599 |||| ||||||| ||||||||| | ||||||||||||||| Sbjct: 1224784 ccaacaactgcagcttcaacggagtgtggaacggcggcgg 1224823 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 560 ccaagaactgcaccttcaacggcgcgtggaacgg 593 |||||||||||| ||||||||||| |||||||| Sbjct: 1176954 ccaagaactgcagcttcaacggcgtctggaacgg 1176987 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 64 gtccacagcaagaccaaattccagtacaa 92 ||||||||||||| ||| ||||||||||| Sbjct: 13934123 gtccacagcaagagcaatttccagtacaa 13934095 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 64 gtccacagcaagaccaaattccagtacaa 92 ||||||||||||| ||| ||||||||||| Sbjct: 13897641 gtccacagcaagagcaatttccagtacaa 13897613
>dbj|AK119786.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-F08, full insert sequence Length = 1689 Score = 73.8 bits (37), Expect = 6e-10 Identities = 193/245 (78%) Strand = Plus / Plus Query: 1 gctggactcagacttatcggagatgacaaggcagagcaaattcttgaagcagtgagggat 60 ||||| || ||||| || |||||||| ||| ||||||||||||||||||| || | ||| Sbjct: 564 gctggtctaagactgattggagatgagaagtcagagcaaattcttgaagcggttcgagat 623 Query: 61 gccgtccacagcaagaccaaattccagtacaatcccagttggatcaatgttctcaagggg 120 ||||||||||||| ||| ||||||||||| || ||||||| ||| || ||| Sbjct: 624 cttgtccacagcaagagcaatttccagtacaaaccagaatggatcagtgtccttgggggt 683 Query: 121 tctcaggaaggatcttacctatgggttgctctgaattacctgctgggtaaactgggagga 180 ||||| |||||||| |||| |||||||||||||| || || |||| || | ||||| Sbjct: 684 tctcaagaaggatccaacctctgggttgctctgaactatcttttggggaagttaggaggg 743 Query: 181 gactactccaagacggtggcagtgatcgaccttggaggtgggtccgtgcagatggcatat 240 || ||||| || || || | ||||||||| || |||||||| || || || ||||| ||| Sbjct: 744 gattactcaaaaaccgtaggagtgatcgatctcggaggtggttcagttcaaatggcctat 803 Query: 241 gccat 245 ||||| Sbjct: 804 gccat 808 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 564 gaactgcaccttcaacggcgcgtggaacggcggcggcg 601 |||||||| ||||||||||| ||||||||||||||||| Sbjct: 1127 gaactgcagcttcaacggcgtgtggaacggcggcggcg 1164 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 310 gagtacctcaaaggaaaagattacaacgtctacgttcacagctacttgca 359 ||||| ||||| ||||||||||| ||| | || |||||||| |||||||| Sbjct: 873 gagtatctcaagggaaaagattataacctttatgttcacagttacttgca 922
>dbj|AK104429.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C10, full insert sequence Length = 1686 Score = 73.8 bits (37), Expect = 6e-10 Identities = 193/245 (78%) Strand = Plus / Plus Query: 1 gctggactcagacttatcggagatgacaaggcagagcaaattcttgaagcagtgagggat 60 ||||| || ||||| || |||||||| ||| ||||||||||||||||||| || | ||| Sbjct: 561 gctggtctaagactgattggagatgagaagtcagagcaaattcttgaagcggttcgagat 620 Query: 61 gccgtccacagcaagaccaaattccagtacaatcccagttggatcaatgttctcaagggg 120 ||||||||||||| ||| ||||||||||| || ||||||| ||| || ||| Sbjct: 621 cttgtccacagcaagagcaatttccagtacaaaccagaatggatcagtgtccttgggggt 680 Query: 121 tctcaggaaggatcttacctatgggttgctctgaattacctgctgggtaaactgggagga 180 ||||| |||||||| |||| |||||||||||||| || || |||| || | ||||| Sbjct: 681 tctcaagaaggatccaacctctgggttgctctgaactatcttttggggaagttaggaggg 740 Query: 181 gactactccaagacggtggcagtgatcgaccttggaggtgggtccgtgcagatggcatat 240 || ||||| || || || | ||||||||| || |||||||| || || || ||||| ||| Sbjct: 741 gattactcaaaaaccgtaggagtgatcgatctcggaggtggttcagttcaaatggcctat 800 Query: 241 gccat 245 ||||| Sbjct: 801 gccat 805 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 564 gaactgcaccttcaacggcgcgtggaacggcggcggcg 601 |||||||| ||||||||||| ||||||||||||||||| Sbjct: 1124 gaactgcagcttcaacggcgtgtggaacggcggcggcg 1161 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 310 gagtacctcaaaggaaaagattacaacgtctacgttcacagctacttgca 359 ||||| ||||| ||||||||||| ||| | || |||||||| |||||||| Sbjct: 870 gagtatctcaagggaaaagattataacctttatgttcacagttacttgca 919
>dbj|AK104082.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C02, full insert sequence Length = 1686 Score = 73.8 bits (37), Expect = 6e-10 Identities = 193/245 (78%) Strand = Plus / Plus Query: 1 gctggactcagacttatcggagatgacaaggcagagcaaattcttgaagcagtgagggat 60 ||||| || ||||| || |||||||| ||| ||||||||||||||||||| || | ||| Sbjct: 561 gctggtctaagactgattggagatgagaagtcagagcaaattcttgaagcggttcgagat 620 Query: 61 gccgtccacagcaagaccaaattccagtacaatcccagttggatcaatgttctcaagggg 120 ||||||||||||| ||| ||||||||||| || ||||||| ||| || ||| Sbjct: 621 cttgtccacagcaagagcaatttccagtacaaaccagaatggatcagtgtccttgggggt 680 Query: 121 tctcaggaaggatcttacctatgggttgctctgaattacctgctgggtaaactgggagga 180 ||||| |||||||| |||| |||||||||||||| || || |||| || | ||||| Sbjct: 681 tctcaagaaggatccaacctctgggttgctctgaactatcttttggggaagttaggaggg 740 Query: 181 gactactccaagacggtggcagtgatcgaccttggaggtgggtccgtgcagatggcatat 240 || ||||| || || || | ||||||||| || |||||||| || || || ||||| ||| Sbjct: 741 gattactcaaaaaccgtaggagtgatcgatctcggaggtggttcagttcaaatggcctat 800 Query: 241 gccat 245 ||||| Sbjct: 801 gccat 805 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 564 gaactgcaccttcaacggcgcgtggaacggcggcggcg 601 |||||||| ||||||||||| ||||||||||||||||| Sbjct: 1124 gaactgcagcttcaacggcgtgtggaacggcggcggcg 1161 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 310 gagtacctcaaaggaaaagattacaacgtctacgttcacagctacttgca 359 ||||| ||||| ||||||||||| ||| | || |||||||| |||||||| Sbjct: 870 gagtatctcaagggaaaagattataacctttatgttcacagttacttgca 919
>dbj|AK069955.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036G10, full insert sequence Length = 1691 Score = 73.8 bits (37), Expect = 6e-10 Identities = 193/245 (78%) Strand = Plus / Plus Query: 1 gctggactcagacttatcggagatgacaaggcagagcaaattcttgaagcagtgagggat 60 ||||| || ||||| || |||||||| ||| ||||||||||||||||||| || | ||| Sbjct: 566 gctggtctaagactgattggagatgagaagtcagagcaaattcttgaagcggttcgagat 625 Query: 61 gccgtccacagcaagaccaaattccagtacaatcccagttggatcaatgttctcaagggg 120 ||||||||||||| ||| ||||||||||| || ||||||| ||| || ||| Sbjct: 626 cttgtccacagcaagagcaatttccagtacaaaccagaatggatcagtgtccttgggggt 685 Query: 121 tctcaggaaggatcttacctatgggttgctctgaattacctgctgggtaaactgggagga 180 ||||| |||||||| |||| |||||||||||||| || || |||| || | ||||| Sbjct: 686 tctcaagaaggatccaacctctgggttgctctgaactatcttttggggaagttaggaggg 745 Query: 181 gactactccaagacggtggcagtgatcgaccttggaggtgggtccgtgcagatggcatat 240 || ||||| || || || | ||||||||| || |||||||| || || || ||||| ||| Sbjct: 746 gattactcaaaaaccgtaggagtgatcgatctcggaggtggttcagttcaaatggcctat 805 Query: 241 gccat 245 ||||| Sbjct: 806 gccat 810 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 564 gaactgcaccttcaacggcgcgtggaacggcggcggcg 601 |||||||| ||||||||||| ||||||||||||||||| Sbjct: 1129 gaactgcagcttcaacggcgtgtggaacggcggcggcg 1166 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 310 gagtacctcaaaggaaaagattacaacgtctacgttcacagctacttgca 359 ||||| ||||| ||||||||||| ||| | || |||||||| |||||||| Sbjct: 875 gagtatctcaagggaaaagattataacctttatgttcacagttacttgca 924
>gb|AC169370.4| Sorghum bicolor clone SB_BBc0011I20, complete sequence Length = 135209 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 144 ggttgctctgaattacctgctgggtaaactgggaggagactactccaagacggtggcagt 203 ||||||||||||||| ||| | ||||| ||||||| |||||||| |||||||| | ||| Sbjct: 17521 ggttgctctgaattatctgttaggtaagttgggaggggactactcgaagacggttggagt 17462 Query: 204 gatcgaccttggaggtgggtccgtgcagatggcatatgcc 243 ||| || | |||||||| || ||||| |||||||||||| Sbjct: 17461 gatagatttgggaggtggatcagtgcaaatggcatatgcc 17422 Score = 69.9 bits (35), Expect = 9e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 64 gtccacagcaagaccaaattccagtacaatcccagttggatcaatgttctcaaggggtct 123 ||||||| ||||| |||||| |||||||| |||| ||||||| ||||||| |||| | Sbjct: 17734 gtccacaccaagagcaaatttcagtacaaccccaaatggatcactgttctcgagggaacg 17675 Query: 124 caggaaggatcttacctatgggt 146 || |||||||||||||||||||| Sbjct: 17674 caagaaggatcttacctatgggt 17652 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 16 atcggagatgacaaggcagagcaaattcttgaagc 50 ||||||||||| ||||||||| | ||||||||||| Sbjct: 17873 atcggagatgagaaggcagaggagattcttgaagc 17839
>gb|AC145812.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0096A19 map near 50283S, complete sequence Length = 139969 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 564 gaactgcaccttcaacggcgcgtggaacggcggcggcg 601 |||||||| ||||||||||| ||||||||||||||||| Sbjct: 88485 gaactgcagcttcaacggcgtgtggaacggcggcggcg 88448 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 564 gaactgcaccttcaacggcgcgtggaacggcggcggcg 601 |||||||| ||||||||||| ||||||||||||||||| Sbjct: 52003 gaactgcagcttcaacggcgtgtggaacggcggcggcg 51966 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 1 gctggactcagacttatcggagatgacaaggcagagcaaattcttgaagc 50 ||||| || ||||| || |||||||| ||| ||||||||||||||||||| Sbjct: 89870 gctggtctaagactgattggagatgagaagtcagagcaaattcttgaagc 89821 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 1 gctggactcagacttatcggagatgacaaggcagagcaaattcttgaagc 50 ||||| || ||||| || |||||||| ||| ||||||||||||||||||| Sbjct: 53388 gctggtctaagactgattggagatgagaagtcagagcaaattcttgaagc 53339 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 64 gtccacagcaagaccaaattccagtacaa 92 ||||||||||||| ||| ||||||||||| Sbjct: 89680 gtccacagcaagagcaatttccagtacaa 89652 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 64 gtccacagcaagaccaaattccagtacaa 92 ||||||||||||| ||| ||||||||||| Sbjct: 53198 gtccacagcaagagcaatttccagtacaa 53170
>dbj|AK100760.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023119H05, full insert sequence Length = 1834 Score = 54.0 bits (27), Expect = 5e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 175 ggaggagactactccaagacggtggcagtgatcgaccttggaggtgggtccgtgcagatg 234 ||||| ||||||||||| || |||| ||||| || || ||||| || |||||||| ||| Sbjct: 408 ggaggtgactactccaaaactgtgggtgtgattgatctcggaggcggatccgtgcaaatg 467 Query: 235 gcatatgccatctca 249 || |||||||||||| Sbjct: 468 gcctatgccatctca 482 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 1 gctggactcagacttatcggagatgacaag 30 ||||||||||||||||| |||||||||||| Sbjct: 353 gctggactcagacttattggagatgacaag 382 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Plus Query: 560 ccaagaactgcaccttcaacggcgcgtggaacggcggcgg 599 |||| ||||||| ||||||||| | ||||||||||||||| Sbjct: 792 ccaacaactgcagcttcaacggagtgtggaacggcggcgg 831
>ref|XM_479565.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2039 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 211 cttggaggtgggtccgtgcagatggcatatgc 242 ||||||||||| || ||||||||||||||||| Sbjct: 988 cttggaggtggatctgtgcagatggcatatgc 1019
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 211 cttggaggtgggtccgtgcagatggcatatgc 242 ||||||||||| || ||||||||||||||||| Sbjct: 28911344 cttggaggtggatctgtgcagatggcatatgc 28911375
>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0060O17 Length = 180015 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 211 cttggaggtgggtccgtgcagatggcatatgc 242 ||||||||||| || ||||||||||||||||| Sbjct: 28881 cttggaggtggatctgtgcagatggcatatgc 28912
>dbj|AK066262.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059O11, full insert sequence Length = 2038 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 211 cttggaggtgggtccgtgcagatggcatatgc 242 ||||||||||| || ||||||||||||||||| Sbjct: 987 cttggaggtggatctgtgcagatggcatatgc 1018
>dbj|AK059453.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-B11, full insert sequence Length = 735 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Plus Query: 560 ccaagaactgcaccttcaacggcgcgtggaacggcggcgg 599 |||| ||||||| ||||||||| | ||||||||||||||| Sbjct: 231 ccaacaactgcagcttcaacggagtgtggaacggcggcgg 270
>gb|AF207688.1|AF207688 Glycine soja apyrase GS52 mRNA, complete cds Length = 1463 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 211 cttggaggtgggtccgtgcagatggcatatgccatctca 249 ||||||||||| || || || |||||||||||||||||| Sbjct: 642 cttggaggtggatcagttcaaatggcatatgccatctca 680
>gb|AC123593.1| Genomic sequence for Medicago truncatula, clone MTABa0052G10, complete sequence Length = 100769 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 211 cttggaggtgggtccgtgcagatggcatatgccatctc 248 ||||||||||| || || || ||||||||||||||||| Sbjct: 67440 cttggaggtggatctgttcaaatggcatatgccatctc 67477
>gb|AY180382.1| Medicago truncatula apyrase-like protein (APY2) mRNA, complete cds Length = 2172 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 211 cttggaggtgggtccgtgcagatggcatatgccatctc 248 ||||||||||| || || || ||||||||||||||||| Sbjct: 1003 cttggaggtggatctgttcaaatggcatatgccatctc 1040
>dbj|AB071370.1| Pisum sativum mRNA for PsAPY2, complete cds Length = 2211 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 211 cttggaggtgggtccgtgcagatggcatatgccatctc 248 ||||||||||| || || || ||||||||||||||||| Sbjct: 978 cttggaggtggatctgttcaaatggcatatgccatctc 1015
>gb|AC003954.1| Homo sapiens chromosome 5, Pac clone 162o17 (LBNL H147), complete sequence Length = 122735 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 aggaaggatcttacctatggg 145 ||||||||||||||||||||| Sbjct: 116481 aggaaggatcttacctatggg 116501
>gb|AC108840.13| Mus musculus chromosome 1, clone RP23-348P7, complete sequence Length = 209336 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 atcttacctatgggttgctctgaa 155 ||||||||| |||||||||||||| Sbjct: 189205 atcttacctctgggttgctctgaa 189228
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 536 tgagaatcagcgcgccatgc 555 |||||||||||||||||||| Sbjct: 4975152 tgagaatcagcgcgccatgc 4975133
>emb|AL391597.15| Human DNA sequence from clone RP11-357P18 on chromosome 1 Contains the 3' end of the DAF gene for decay accelerating factor for complement (CD55, Cromer blood group system) and the 5' end of CR2 gene for complement component (3d/Epstein Barr virus) receptor 2, complete sequence Length = 141124 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 aagagtacctcaaaggaaaa 327 |||||||||||||||||||| Sbjct: 82012 aagagtacctcaaaggaaaa 81993
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 caacggggagcaatacgacg 475 |||||||||||||||||||| Sbjct: 4221121 caacggggagcaatacgacg 4221140
>gb|AC121763.1| Genomic sequence for Glycine max (soybean), clone UMb001-26P13, complete sequence Length = 69692 Score = 40.1 bits (20), Expect = 8.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 211 cttggaggtgggtccgtgcagatggcatatgccatctcag 250 ||||||||||| || || || ||||| ||||||||||||| Sbjct: 61940 cttggaggtggatctgttcaaatggcttatgccatctcag 61979
>gb|AC159021.2| Pan troglodytes BAC clone CH251-508C8 from chromosome unknown, complete sequence Length = 240827 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 ggagatgacaaggcagagca 38 |||||||||||||||||||| Sbjct: 82313 ggagatgacaaggcagagca 82332
>gb|AC034228.6| Homo sapiens chromosome 5 clone CTD-2198K16, complete sequence Length = 183378 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 ggagatgacaaggcagagca 38 |||||||||||||||||||| Sbjct: 69248 ggagatgacaaggcagagca 69229
>gb|AC034216.5| Homo sapiens chromosome 5 clone CTD-2004C12, complete sequence Length = 178405 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 ggagatgacaaggcagagca 38 |||||||||||||||||||| Sbjct: 132459 ggagatgacaaggcagagca 132440
>gb|AF298154.1|AF298154 Arcanobacterium pyogenes BirA (birA) gene, partial cds; and neuraminidase NanH (nanH) gene, complete cds Length = 4802 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 575 tcaacggcgcgtggaacggcggcg 598 |||||||||||||| ||||||||| Sbjct: 1984 tcaacggcgcgtggcacggcggcg 2007
>gb|AF305783.1|AF305783 Pisum sativum apyrase 2 (apy2) mRNA, complete cds Length = 1790 Score = 40.1 bits (20), Expect = 8.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 211 cttggaggtgggtccgtgcagatggcatatgccatctcag 250 ||||||||||| || || || |||||||| |||||||||| Sbjct: 766 cttggaggtggatctgttcaaatggcatacgccatctcag 805
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 caacggggagcaatacgacg 475 |||||||||||||||||||| Sbjct: 4315185 caacggggagcaatacgacg 4315204
>gb|AY111776.1| Zea mays CL39796_1 mRNA sequence Length = 952 Score = 40.1 bits (20), Expect = 8.2 Identities = 35/40 (87%) Strand = Plus / Minus Query: 562 aagaactgcaccttcaacggcgcgtggaacggcggcggcg 601 ||||||||||||||||| ||| ||||| |||||||||| Sbjct: 811 aagaactgcaccttcaatggcatatggaatggcggcggcg 772
>gb|AC001226.1|AC001226 Genomic sequence from Human 13, complete sequence Length = 106988 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 cacagcaagaccaaattcca 86 |||||||||||||||||||| Sbjct: 66115 cacagcaagaccaaattcca 66096 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,322,723 Number of Sequences: 3902068 Number of extensions: 4322723 Number of successful extensions: 66639 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 40 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 66174 Number of HSP's gapped (non-prelim): 453 length of query: 601 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 578 effective length of database: 17,143,297,704 effective search space: 9908826072912 effective search space used: 9908826072912 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
