ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags26m04 |
|---|---|
| Clone Library Name | barley_pub |
>NUCL_XENLA (P20397) Nucleolin (Protein C23)| Length = 650 Score = 71.6 bits (174), Expect = 2e-12 Identities = 41/85 (48%), Positives = 55/85 (64%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV GLS+ TT + L+EAF G V +AR++TDR TG SKGFGFV + T EDA E M Sbjct: 504 LFVRGLSEDTTEETLKEAFD--GSV-NARIVTDRDTGASKGFGFVDFSTAEDAKAAKEAM 560 Query: 262 DGEFLDGWVIFAEYARPRPPPQMGG 336 + +DG + ++A+P+ Q GG Sbjct: 561 EDGEIDGNKVTLDFAKPKGDSQRGG 585 Score = 38.1 bits (87), Expect = 0.022 Identities = 26/85 (30%), Positives = 41/85 (48%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L V+ LS T D LRE F K + + G +KGF F+ + + EDA ++ Sbjct: 416 LVVNNLSYSATEDSLREVFEKATSIR-----IPQNQGRAKGFAFIEFSSAEDAKDAMDSC 470 Query: 262 DGEFLDGWVIFAEYARPRPPPQMGG 336 + ++G I E+++ PQ GG Sbjct: 471 NNTEIEGRSIRLEFSQ-GGGPQGGG 494
>ELAV1_HUMAN (Q15717) ELAV-like protein 1 (Hu-antigen R) (HuR)| Length = 326 Score = 69.7 bits (169), Expect = 7e-12 Identities = 36/78 (46%), Positives = 47/78 (60%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL V+ L + T D LR F+ GEVE A++I D+V G S G+GFV YVT +DA + I Sbjct: 21 NLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINT 80 Query: 259 MDGEFLDGWVIFAEYARP 312 ++G L I YARP Sbjct: 81 LNGLRLQSKTIKVSYARP 98 Score = 51.6 bits (122), Expect = 2e-06 Identities = 21/63 (33%), Positives = 39/63 (61%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL++SGL + T + + F++FG + ++RV+ D+ TG S+G F+R+ +A + I Sbjct: 107 NLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITS 166 Query: 259 MDG 267 +G Sbjct: 167 FNG 169 Score = 40.4 bits (93), Expect = 0.004 Identities = 22/62 (35%), Positives = 31/62 (50%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +F+ L + L + F FG V + +VI D T KGFGFV E+AA I + Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305 Query: 262 DG 267 +G Sbjct: 306 NG 307
>TIA1_HUMAN (P31483) Nucleolysin TIA-1 isoform p40 (RNA-binding protein TIA-1)| (p40-TIA-1) [Contains: Nucleolysin TIA-1 isoform p15 (p15-TIA-1)] Length = 386 Score = 68.9 bits (167), Expect = 1e-11 Identities = 34/81 (41%), Positives = 49/81 (60%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 ++FV LS + TT+ ++ AFA FG + ARV+ D TG SKG+GFV + DA I+ Sbjct: 107 HVFVGDLSPQITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166 Query: 259 MDGEFLDGWVIFAEYARPRPP 321 M G++L G I +A +PP Sbjct: 167 MGGQWLGGRQIRTNWATRKPP 187 Score = 41.2 bits (95), Expect = 0.003 Identities = 21/70 (30%), Positives = 38/70 (54%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 ++ G++ T +R+ F+ FG++ RV D KG+ FVR+ + E AA I + Sbjct: 216 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSV 269 Query: 262 DGEFLDGWVI 291 +G ++G V+ Sbjct: 270 NGTTIEGHVV 279
>TIA1_MOUSE (P52912) Nucleolysin TIA-1 (RNA-binding protein TIA-1)| Length = 386 Score = 68.6 bits (166), Expect = 1e-11 Identities = 34/81 (41%), Positives = 48/81 (59%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 ++FV LS TT+ ++ AFA FG + ARV+ D TG SKG+GFV + DA I+ Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166 Query: 259 MDGEFLDGWVIFAEYARPRPP 321 M G++L G I +A +PP Sbjct: 167 MGGQWLGGRQIRTNWATRKPP 187 Score = 41.6 bits (96), Expect = 0.002 Identities = 21/70 (30%), Positives = 38/70 (54%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 ++ G++ T +R+ F+ FG++ RV D KG+ FVR+ + E AA I + Sbjct: 216 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSV 269 Query: 262 DGEFLDGWVI 291 +G ++G V+ Sbjct: 270 NGTTIEGHVV 279
>ELAV1_MOUSE (P70372) ELAV-like protein 1 (Hu-antigen R) (HuR) (Elav-like| generic protein) (MelG) Length = 326 Score = 68.2 bits (165), Expect = 2e-11 Identities = 35/78 (44%), Positives = 47/78 (60%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL V+ L + T + LR F+ GEVE A++I D+V G S G+GFV YVT +DA + I Sbjct: 21 NLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIST 80 Query: 259 MDGEFLDGWVIFAEYARP 312 ++G L I YARP Sbjct: 81 LNGLRLQSKTIKVSYARP 98 Score = 50.1 bits (118), Expect = 6e-06 Identities = 21/63 (33%), Positives = 38/63 (60%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL++SGL + T + + F++FG + ++RV+ D+ TG S+G F+R+ +A + I Sbjct: 107 NLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITS 166 Query: 259 MDG 267 G Sbjct: 167 FIG 169 Score = 39.3 bits (90), Expect = 0.010 Identities = 21/62 (33%), Positives = 31/62 (50%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +F+ L + L + F FG V + +VI D T KGFGFV E++A I + Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEESAMAIASL 305 Query: 262 DG 267 +G Sbjct: 306 NG 307
>TIAR_HUMAN (Q01085) Nucleolysin TIAR (TIA-1-related protein)| Length = 375 Score = 67.8 bits (164), Expect = 3e-11 Identities = 34/81 (41%), Positives = 48/81 (59%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 ++FV LS TT+ ++ AFA FG++ ARV+ D TG SKG+GFV + DA I Sbjct: 98 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 157 Query: 259 MDGEFLDGWVIFAEYARPRPP 321 M G++L G I +A +PP Sbjct: 158 MGGQWLGGRQIRTNWATRKPP 178 Score = 43.5 bits (101), Expect = 5e-04 Identities = 22/79 (27%), Positives = 41/79 (51%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 ++ G++ T +R+ F+ FG++ RV + KG+ FVR+ T E AA I + Sbjct: 207 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 260 Query: 262 DGEFLDGWVIFAEYARPRP 318 +G ++G V+ + + P Sbjct: 261 NGTTIEGHVVKCYWGKESP 279
>NUCL_CHICK (P15771) Nucleolin (Protein C23)| Length = 694 Score = 67.8 bits (164), Expect = 3e-11 Identities = 39/85 (45%), Positives = 54/85 (63%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV GLS+ TT + LRE+F G + AR++TDR TG SKGFGFV + + EDA E M Sbjct: 555 LFVRGLSEDTTEETLRESFE--GSIS-ARIVTDRDTGSSKGFGFVDFSSPEDAKAAKEAM 611 Query: 262 DGEFLDGWVIFAEYARPRPPPQMGG 336 + +DG + ++A+P+ Q GG Sbjct: 612 EDGEIDGNKVTLDFAKPKGEFQRGG 636 Score = 38.5 bits (88), Expect = 0.017 Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 2/87 (2%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV L R T D ++ F EV R++ ++ G SKG ++ + T +A K +E Sbjct: 373 LFVKNLPYRVTEDEMKNVFENALEV---RLVLNK-EGSSKGMAYIEFKTEAEAEKALEEK 428 Query: 262 DGEFLDGWVIFAEYA--RPRPPPQMGG 336 G +DG + +Y + + Q GG Sbjct: 429 QGTEVDGRAMVIDYTGEKSQQESQKGG 455 Score = 35.8 bits (81), Expect = 0.11 Identities = 21/77 (27%), Positives = 37/77 (48%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L V+ LS + + L+E F K ++ + G KG+ FV + T EDA + + Sbjct: 463 LIVNNLSYAASEETLQELFKKATSIK----MPQNNQGRPKGYAFVEFPTAEDAKEALNSC 518 Query: 262 DGEFLDGWVIFAEYARP 312 + ++G I E++ P Sbjct: 519 NNTEIEGRAIRLEFSSP 535
>TIAR_MOUSE (P70318) Nucleolysin TIAR (TIA-1-related protein)| Length = 392 Score = 67.8 bits (164), Expect = 3e-11 Identities = 34/81 (41%), Positives = 48/81 (59%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 ++FV LS TT+ ++ AFA FG++ ARV+ D TG SKG+GFV + DA I Sbjct: 115 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 174 Query: 259 MDGEFLDGWVIFAEYARPRPP 321 M G++L G I +A +PP Sbjct: 175 MGGQWLGGRQIRTNWATRKPP 195 Score = 43.5 bits (101), Expect = 5e-04 Identities = 22/79 (27%), Positives = 41/79 (51%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 ++ G++ T +R+ F+ FG++ RV + KG+ FVR+ T E AA I + Sbjct: 224 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 277 Query: 262 DGEFLDGWVIFAEYARPRP 318 +G ++G V+ + + P Sbjct: 278 NGTTIEGHVVKCYWGKESP 296
>GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2| Length = 168 Score = 66.6 bits (161), Expect = 6e-11 Identities = 37/84 (44%), Positives = 50/84 (59%) Frame = +1 Query: 85 FVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGMD 264 FV GL+ T + L +AFA FG+V ++VITDR TG S+GFGFV + + + IE M+ Sbjct: 11 FVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMN 70 Query: 265 GEFLDGWVIFAEYARPRPPPQMGG 336 G+ LDG I A+ R GG Sbjct: 71 GKELDGRNITVNQAQSRGGGGGGG 94
>GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochondrial| precursor (AtGRP2) Length = 158 Score = 66.2 bits (160), Expect = 7e-11 Identities = 41/87 (47%), Positives = 49/87 (56%), Gaps = 2/87 (2%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ GLS T LR+AFA FG+V A+VI DR TG S+GFGFV + A I M Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96 Query: 262 DGEFLDGWVIFAEYARPRP--PPQMGG 336 DG+ L+G I A RP P GG Sbjct: 97 DGKELNGRHIRVNPANDRPSAPRAYGG 123
>GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-inducible protein| Length = 157 Score = 65.9 bits (159), Expect = 1e-10 Identities = 36/84 (42%), Positives = 49/84 (58%) Frame = +1 Query: 85 FVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGMD 264 FV GL+ T+ + L AFA +GE+ ++VITDR TG S+GFGFV + + IE M+ Sbjct: 11 FVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMN 70 Query: 265 GEFLDGWVIFAEYARPRPPPQMGG 336 G+ LDG I A+ R GG Sbjct: 71 GKELDGRNITVNQAQSRGGGGGGG 94
>GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein| Length = 157 Score = 65.9 bits (159), Expect = 1e-10 Identities = 34/84 (40%), Positives = 50/84 (59%) Frame = +1 Query: 85 FVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGMD 264 FV GL+ T + L +AF++FG++ +++I DR TG S+GFGFV + + IEGM+ Sbjct: 9 FVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMN 68 Query: 265 GEFLDGWVIFAEYARPRPPPQMGG 336 G+ LDG I A+ R GG Sbjct: 69 GQELDGRNITVNEAQSRGSGGGGG 92
>NUCL_MOUSE (P09405) Nucleolin (Protein C23)| Length = 706 Score = 65.5 bits (158), Expect = 1e-10 Identities = 38/85 (44%), Positives = 53/85 (62%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV GLS+ TT + L+E+F G V AR++TDR TG SKGFGFV + + EDA E M Sbjct: 570 LFVKGLSEDTTEETLKESFE--GSVR-ARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAM 626 Query: 262 DGEFLDGWVIFAEYARPRPPPQMGG 336 + +DG + ++A+P+ GG Sbjct: 627 EDGEIDGNKVTLDWAKPKGEGGFGG 651 Score = 32.7 bits (73), Expect = 0.91 Identities = 21/67 (31%), Positives = 32/67 (47%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L LS T D L+E F E+ R+++ G SKG ++ + + DA K +E Sbjct: 396 LLAKNLSFNITEDELKEVFEDAMEI---RLVSQ--DGKSKGIAYIEFKSEADAEKNLEEK 450 Query: 262 DGEFLDG 282 G +DG Sbjct: 451 QGAEIDG 457 Score = 30.0 bits (66), Expect = 5.9 Identities = 19/73 (26%), Positives = 33/73 (45%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L +S LS T + L E F K ++ + G KG+ F+ + + EDA + + Sbjct: 488 LVLSNLSYSATKETLEEVFEKATFIK----VPQNPHGKPKGYAFIEFASFEDAKEALNSC 543 Query: 262 DGEFLDGWVIFAE 300 + ++G I E Sbjct: 544 NKMEIEGRTIRLE 556
>NUCL_MESAU (P08199) Nucleolin (Protein C23)| Length = 713 Score = 65.5 bits (158), Expect = 1e-10 Identities = 38/85 (44%), Positives = 53/85 (62%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV GLS+ TT + L+E+F G V AR++TDR TG SKGFGFV + + EDA E M Sbjct: 573 LFVKGLSEDTTEETLKESFE--GSVR-ARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAM 629 Query: 262 DGEFLDGWVIFAEYARPRPPPQMGG 336 + +DG + ++A+P+ GG Sbjct: 630 EDGEIDGNKVTLDWAKPKGEGGFGG 654 Score = 37.4 bits (85), Expect = 0.037 Identities = 23/81 (28%), Positives = 38/81 (46%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L +S LS T + L+E F K ++ + G SKG+ F+ + + EDA + + Sbjct: 487 LVLSNLSYSATEETLQEVFEKATFIK----VPQNQQGKSKGYAFIEFASFEDAKEALNSC 542 Query: 262 DGEFLDGWVIFAEYARPRPPP 324 + ++G I E PR P Sbjct: 543 NKMEIEGRTIRLELQGPRGSP 563 Score = 32.3 bits (72), Expect = 1.2 Identities = 21/67 (31%), Positives = 32/67 (47%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L LS T D L+E F E+ R+++ G SKG ++ + + DA K +E Sbjct: 395 LLAKNLSFNITEDELKEVFEDALEI---RLVSQ--DGKSKGIAYIEFKSEADAEKNLEEK 449 Query: 262 DGEFLDG 282 G +DG Sbjct: 450 QGAEIDG 456
>YDC1_SCHPO (Q10422) Hypothetical RNA-binding protein C25G10.01 in chromosome I| Length = 297 Score = 65.5 bits (158), Expect = 1e-10 Identities = 34/91 (37%), Positives = 54/91 (59%), Gaps = 6/91 (6%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 +LFVSG++ R D L++ F+KFG V H R++ + VT S+GFGF+ + TVE+A I+ Sbjct: 102 DLFVSGIASRMQEDELQQIFSKFGTVTHVRIMREPVTKASRGFGFLSFSTVEEATSAIDN 161 Query: 259 MDGEFLDGWVIFAEYAR------PRPPPQMG 333 ++ + G V+ + A+ P P MG Sbjct: 162 LNSQEFYGRVLNVQKAKRSRPHSPTPGKYMG 192
>NUCL_RAT (P13383) Nucleolin (Protein C23)| Length = 712 Score = 65.5 bits (158), Expect = 1e-10 Identities = 38/85 (44%), Positives = 53/85 (62%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV GLS+ TT + L+E+F G V AR++TDR TG SKGFGFV + + EDA E M Sbjct: 576 LFVKGLSEDTTEETLKESFE--GSVR-ARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAM 632 Query: 262 DGEFLDGWVIFAEYARPRPPPQMGG 336 + +DG + ++A+P+ GG Sbjct: 633 EDGEIDGNKVTLDWAKPKGEGGFGG 657 Score = 37.0 bits (84), Expect = 0.048 Identities = 23/81 (28%), Positives = 38/81 (46%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L +S LS T + L+E F K ++ + G SKG+ F+ + + EDA + + Sbjct: 490 LVLSNLSYSATEETLQEVFEKATFIK----VPQNPHGKSKGYAFIEFASFEDAKEALNSC 545 Query: 262 DGEFLDGWVIFAEYARPRPPP 324 + ++G I E PR P Sbjct: 546 NKMEIEGRTIRLELQGPRGSP 566 Score = 32.7 bits (73), Expect = 0.91 Identities = 21/67 (31%), Positives = 32/67 (47%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L LS T D L+E F E+ R+++ G SKG ++ + + DA K +E Sbjct: 398 LLAKNLSFNITEDELKEVFEDAVEI---RLVSQ--DGRSKGIAYIEFKSEADAEKNLEEK 452 Query: 262 DGEFLDG 282 G +DG Sbjct: 453 QGAEIDG 459
>NUCL_PONPY (Q5RF26) Nucleolin| Length = 711 Score = 65.1 bits (157), Expect = 2e-10 Identities = 38/85 (44%), Positives = 53/85 (62%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV GLS+ TT + L+E+F G V AR++TDR TG SKGFGFV + + EDA E M Sbjct: 575 LFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAM 631 Query: 262 DGEFLDGWVIFAEYARPRPPPQMGG 336 + +DG + ++A+P+ GG Sbjct: 632 EDGEIDGNKVTLDWAKPKGEGGFGG 656 Score = 38.5 bits (88), Expect = 0.017 Identities = 23/81 (28%), Positives = 38/81 (46%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L +S LS T + L+E F K ++ + G SKG+ F+ + + EDA + + Sbjct: 489 LVLSNLSYSATEETLQEVFEKATFIK----VPQNQNGKSKGYAFIEFASFEDAKEALNSC 544 Query: 262 DGEFLDGWVIFAEYARPRPPP 324 + ++G I E PR P Sbjct: 545 NKREIEGRAIRLELQGPRGSP 565 Score = 33.5 bits (75), Expect = 0.53 Identities = 23/74 (31%), Positives = 33/74 (44%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L L + T D L+E F E+ R+++ G SKG ++ + T DA K E Sbjct: 396 LLAKNLPYKVTQDELKEVFEDAAEI---RLVSK--DGKSKGIAYIEFKTEADAEKTFEEK 450 Query: 262 DGEFLDGWVIFAEY 303 G +DG I Y Sbjct: 451 QGTEIDGRSISLYY 464
>RT19_ARATH (P39697) 40S ribosomal protein S19, mitochondrial precursor| Length = 212 Score = 65.1 bits (157), Expect = 2e-10 Identities = 31/79 (39%), Positives = 50/79 (63%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L++ GLS T L++AF+ F V ARV+T++VTG S+G+GFV +++ + A I M Sbjct: 33 LYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAM 92 Query: 262 DGEFLDGWVIFAEYARPRP 318 +G+ L+G+ I A+ P Sbjct: 93 NGQELNGFNISVNVAKDWP 111
>NUCL_HUMAN (P19338) Nucleolin (Protein C23)| Length = 709 Score = 65.1 bits (157), Expect = 2e-10 Identities = 38/85 (44%), Positives = 53/85 (62%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV GLS+ TT + L+E+F G V AR++TDR TG SKGFGFV + + EDA E M Sbjct: 573 LFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAM 629 Query: 262 DGEFLDGWVIFAEYARPRPPPQMGG 336 + +DG + ++A+P+ GG Sbjct: 630 EDGEIDGNKVTLDWAKPKGEGGFGG 654 Score = 38.5 bits (88), Expect = 0.017 Identities = 23/81 (28%), Positives = 38/81 (46%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L +S LS T + L+E F K ++ + G SKG+ F+ + + EDA + + Sbjct: 487 LVLSNLSYSATEETLQEVFEKATFIK----VPQNQNGKSKGYAFIEFASFEDAKEALNSC 542 Query: 262 DGEFLDGWVIFAEYARPRPPP 324 + ++G I E PR P Sbjct: 543 NKREIEGRAIRLELQGPRGSP 563 Score = 33.5 bits (75), Expect = 0.53 Identities = 23/74 (31%), Positives = 33/74 (44%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L L + T D L+E F E+ R+++ G SKG ++ + T DA K E Sbjct: 394 LLAKNLPYKVTQDELKEVFEDAAEI---RLVSK--DGKSKGIAYIEFKTEADAEKTFEEK 448 Query: 262 DGEFLDGWVIFAEY 303 G +DG I Y Sbjct: 449 QGTEIDGRSISLYY 462
>NUCL_MACFA (Q4R4J7) Nucleolin| Length = 710 Score = 65.1 bits (157), Expect = 2e-10 Identities = 38/85 (44%), Positives = 53/85 (62%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV GLS+ TT + L+E+F G V AR++TDR TG SKGFGFV + + EDA E M Sbjct: 574 LFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAM 630 Query: 262 DGEFLDGWVIFAEYARPRPPPQMGG 336 + +DG + ++A+P+ GG Sbjct: 631 EDGEIDGNKVTLDWAKPKGEGGFGG 655 Score = 38.5 bits (88), Expect = 0.017 Identities = 23/81 (28%), Positives = 38/81 (46%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L +S LS T + L+E F K ++ + G SKG+ F+ + + EDA + + Sbjct: 488 LVLSNLSYSATEETLQEVFEKATFIK----VPQNQNGKSKGYAFIEFASFEDAKEALNSC 543 Query: 262 DGEFLDGWVIFAEYARPRPPP 324 + ++G I E PR P Sbjct: 544 NKREIEGRAIRLELQGPRGSP 564 Score = 33.5 bits (75), Expect = 0.53 Identities = 23/74 (31%), Positives = 33/74 (44%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L L + T D L+E F E+ R+++ G SKG ++ + T DA K E Sbjct: 395 LLAKNLPYKVTQDELKEVFEDAAEI---RLVSK--DGKSKGIAYIEFKTEADAEKTFEEK 449 Query: 262 DGEFLDGWVIFAEY 303 G +DG I Y Sbjct: 450 QGTEIDGRSISLYY 463
>GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A| Length = 169 Score = 63.5 bits (153), Expect = 5e-10 Identities = 35/84 (41%), Positives = 48/84 (57%) Frame = +1 Query: 85 FVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGMD 264 FV GL+ T L AF++FGE+ +++I DR TG S+GFGFV + + IEGM+ Sbjct: 11 FVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMN 70 Query: 265 GEFLDGWVIFAEYARPRPPPQMGG 336 G+ LDG I A+ R GG Sbjct: 71 GQDLDGRSITVNEAQSRGSGAGGG 94
>GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A| Length = 166 Score = 62.8 bits (151), Expect = 8e-10 Identities = 35/84 (41%), Positives = 48/84 (57%) Frame = +1 Query: 85 FVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGMD 264 FV GL+ T L AF+++GEV +++I DR TG S+GFGFV + + IEGM+ Sbjct: 11 FVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMN 70 Query: 265 GEFLDGWVIFAEYARPRPPPQMGG 336 G+ LDG I A+ R GG Sbjct: 71 GQDLDGRSITVNEAQSRGSGGGGG 94
>NSR1_YEAST (P27476) Nuclear localization sequence-binding protein (P67)| Length = 414 Score = 62.8 bits (151), Expect = 8e-10 Identities = 30/79 (37%), Positives = 46/79 (58%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ LS D + E FAK GEV R+ T T KGFG+V++ +EDA K ++ + Sbjct: 269 LFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDAL 328 Query: 262 DGEFLDGWVIFAEYARPRP 318 GE++D + +++ PRP Sbjct: 329 QGEYIDNRPVRLDFSSPRP 347 Score = 45.4 bits (106), Expect = 1e-04 Identities = 27/79 (34%), Positives = 42/79 (53%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +FV LS + L++ F G V ARVI +R T S+G+G+V + A K I+ M Sbjct: 170 IFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEM 229 Query: 262 DGEFLDGWVIFAEYARPRP 318 G+ +DG I + + +P Sbjct: 230 QGKEIDGRPINCDMSTSKP 248
>CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (xCIRP) Length = 163 Score = 62.0 bits (149), Expect = 1e-09 Identities = 32/85 (37%), Positives = 47/85 (55%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ GL+ T D L +AF K+G + V+ DR T S+GFGFV + V+DA + M Sbjct: 7 LFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMAM 66 Query: 262 DGEFLDGWVIFAEYARPRPPPQMGG 336 +G+ +DG I + A + GG Sbjct: 67 NGKSVDGRQIRVDQAGKSSGERRGG 91
>ELAV2_PONPY (Q5R9Z6) ELAV-like protein 2| Length = 359 Score = 62.0 bits (149), Expect = 1e-09 Identities = 30/78 (38%), Positives = 45/78 (57%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL V+ L + T + L+ F GE+E +++ D++TG S G+GFV Y+ +DA K I Sbjct: 40 NLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINT 99 Query: 259 MDGEFLDGWVIFAEYARP 312 ++G L I YARP Sbjct: 100 LNGLRLQTKTIKVSYARP 117 Score = 58.2 bits (139), Expect = 2e-08 Identities = 25/64 (39%), Positives = 44/64 (68%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL+VSGL K T L + F+++G + +R++ D+VTG S+G GF+R+ +A + I+G Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKG 185 Query: 259 MDGE 270 ++G+ Sbjct: 186 LNGQ 189 Score = 39.7 bits (91), Expect = 0.007 Identities = 22/62 (35%), Positives = 31/62 (50%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +FV L+ L + F FG V + +VI D T KGFGFV ++AA I + Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337 Query: 262 DG 267 +G Sbjct: 338 NG 339
>ELAV2_HUMAN (Q12926) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like| neuronal protein 1) (Nervous system-specific RNA-binding protein Hel-N1) Length = 359 Score = 62.0 bits (149), Expect = 1e-09 Identities = 30/78 (38%), Positives = 45/78 (57%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL V+ L + T + L+ F GE+E +++ D++TG S G+GFV Y+ +DA K I Sbjct: 40 NLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINT 99 Query: 259 MDGEFLDGWVIFAEYARP 312 ++G L I YARP Sbjct: 100 LNGLRLQTKTIKVSYARP 117 Score = 58.2 bits (139), Expect = 2e-08 Identities = 25/64 (39%), Positives = 44/64 (68%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL+VSGL K T L + F+++G + +R++ D+VTG S+G GF+R+ +A + I+G Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKG 185 Query: 259 MDGE 270 ++G+ Sbjct: 186 LNGQ 189 Score = 39.7 bits (91), Expect = 0.007 Identities = 22/62 (35%), Positives = 31/62 (50%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +FV L+ L + F FG V + +VI D T KGFGFV ++AA I + Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337 Query: 262 DG 267 +G Sbjct: 338 NG 339
>ELAV2_MOUSE (Q60899) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like| neuronal protein 1) (Nervous system-specific RNA-binding protein Mel-N1) Length = 360 Score = 62.0 bits (149), Expect = 1e-09 Identities = 30/78 (38%), Positives = 45/78 (57%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL V+ L + T + L+ F GE+E +++ D++TG S G+GFV Y+ +DA K I Sbjct: 40 NLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINT 99 Query: 259 MDGEFLDGWVIFAEYARP 312 ++G L I YARP Sbjct: 100 LNGLRLQTKTIKVSYARP 117 Score = 58.2 bits (139), Expect = 2e-08 Identities = 25/64 (39%), Positives = 44/64 (68%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL+VSGL K T L + F+++G + +R++ D+VTG S+G GF+R+ +A + I+G Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKG 185 Query: 259 MDGE 270 ++G+ Sbjct: 186 LNGQ 189 Score = 39.7 bits (91), Expect = 0.007 Identities = 22/62 (35%), Positives = 31/62 (50%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +FV L+ L + F FG V + +VI D T KGFGFV ++AA I + Sbjct: 279 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 338 Query: 262 DG 267 +G Sbjct: 339 NG 340
>GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7| Length = 176 Score = 62.0 bits (149), Expect = 1e-09 Identities = 35/84 (41%), Positives = 48/84 (57%) Frame = +1 Query: 85 FVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGMD 264 FV GL+ T L AFA++G+V +++I DR TG S+GFGFV + + IEGM+ Sbjct: 11 FVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMN 70 Query: 265 GEFLDGWVIFAEYARPRPPPQMGG 336 G+ LDG I A+ R GG Sbjct: 71 GQDLDGRSITVNEAQSRGSGGGGG 94
>ELAV4_HUMAN (P26378) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 380 Score = 61.6 bits (148), Expect = 2e-09 Identities = 30/78 (38%), Positives = 44/78 (56%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL V+ L + T + R F GE+E +++ D++TG S G+GFV Y+ +DA K I Sbjct: 47 NLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINT 106 Query: 259 MDGEFLDGWVIFAEYARP 312 ++G L I YARP Sbjct: 107 LNGLRLQTKTIKVSYARP 124 Score = 57.8 bits (138), Expect = 3e-08 Identities = 25/64 (39%), Positives = 44/64 (68%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL+VSGL K T L + F+++G + +R++ D+VTG S+G GF+R+ +A + I+G Sbjct: 133 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKG 192 Query: 259 MDGE 270 ++G+ Sbjct: 193 LNGQ 196 Score = 42.0 bits (97), Expect = 0.001 Identities = 23/62 (37%), Positives = 32/62 (51%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +FV LS + L + F FG V + +VI D T KGFGFV ++AA I + Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358 Query: 262 DG 267 +G Sbjct: 359 NG 360
>ELAV4_MOUSE (Q61701) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 385 Score = 61.6 bits (148), Expect = 2e-09 Identities = 30/78 (38%), Positives = 44/78 (56%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL V+ L + T + R F GE+E +++ D++TG S G+GFV Y+ +DA K I Sbjct: 52 NLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINT 111 Query: 259 MDGEFLDGWVIFAEYARP 312 ++G L I YARP Sbjct: 112 LNGLRLQTKTIKVSYARP 129 Score = 57.8 bits (138), Expect = 3e-08 Identities = 25/64 (39%), Positives = 44/64 (68%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL+VSGL K T L + F+++G + +R++ D+VTG S+G GF+R+ +A + I+G Sbjct: 138 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKG 197 Query: 259 MDGE 270 ++G+ Sbjct: 198 LNGQ 201 Score = 42.0 bits (97), Expect = 0.001 Identities = 23/62 (37%), Positives = 32/62 (51%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +FV LS + L + F FG V + +VI D T KGFGFV ++AA I + Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 363 Query: 262 DG 267 +G Sbjct: 364 NG 365
>RBM8A_MOUSE (Q9CWZ3) RNA-binding protein 8A (RNA-binding motif protein 8A)| (Ribonucleoprotein RBM8A) Length = 174 Score = 61.6 bits (148), Expect = 2e-09 Identities = 28/82 (34%), Positives = 51/82 (62%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV+G+ + T + + + FA++GE+++ + DR TG+ KG+ V Y T ++A +EG+ Sbjct: 75 LFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGL 134 Query: 262 DGEFLDGWVIFAEYARPRPPPQ 327 +G+ L G I ++ R PP+ Sbjct: 135 NGQDLMGQPISVDWCFVRGPPK 156
>RBM8A_HUMAN (Q9Y5S9) RNA-binding protein 8A (RNA-binding motif protein 8A)| (Ribonucleoprotein RBM8A) (RNA-binding protein Y14) (Binder of OVCA1-1) (BOV-1) Length = 174 Score = 61.6 bits (148), Expect = 2e-09 Identities = 28/82 (34%), Positives = 51/82 (62%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV+G+ + T + + + FA++GE+++ + DR TG+ KG+ V Y T ++A +EG+ Sbjct: 75 LFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGL 134 Query: 262 DGEFLDGWVIFAEYARPRPPPQ 327 +G+ L G I ++ R PP+ Sbjct: 135 NGQDLMGQPISVDWCFVRGPPK 156
>ELAV4_RAT (O09032) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 373 Score = 61.6 bits (148), Expect = 2e-09 Identities = 30/78 (38%), Positives = 44/78 (56%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL V+ L + T + R F GE+E +++ D++TG S G+GFV Y+ +DA K I Sbjct: 40 NLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINT 99 Query: 259 MDGEFLDGWVIFAEYARP 312 ++G L I YARP Sbjct: 100 LNGLRLQTKTIKVSYARP 117 Score = 57.8 bits (138), Expect = 3e-08 Identities = 25/64 (39%), Positives = 44/64 (68%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL+VSGL K T L + F+++G + +R++ D+VTG S+G GF+R+ +A + I+G Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKG 185 Query: 259 MDGE 270 ++G+ Sbjct: 186 LNGQ 189 Score = 42.0 bits (97), Expect = 0.001 Identities = 23/62 (37%), Positives = 32/62 (51%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +FV LS + L + F FG V + +VI D T KGFGFV ++AA I + Sbjct: 292 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 351 Query: 262 DG 267 +G Sbjct: 352 NG 353
>RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) Length = 153 Score = 60.5 bits (145), Expect = 4e-09 Identities = 32/86 (37%), Positives = 45/86 (52%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV GL+ T L + F+ FG + V+ DR T S+GFGF+ + E A+ + M Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAM 67 Query: 262 DGEFLDGWVIFAEYARPRPPPQMGGA 339 +GE LDG I ++A GGA Sbjct: 68 NGESLDGRQIRVDHAGKSARGSRGGA 93
>GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 protein)| Length = 169 Score = 60.1 bits (144), Expect = 5e-09 Identities = 33/84 (39%), Positives = 49/84 (58%) Frame = +1 Query: 85 FVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGMD 264 FV GL+ T + L+ F++FG+V +++I DR +G S+GFGFV + + IE M+ Sbjct: 9 FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMN 68 Query: 265 GEFLDGWVIFAEYARPRPPPQMGG 336 G+ LDG VI A+ R GG Sbjct: 69 GKELDGRVITVNEAQSRGSGGGGG 92
>SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) Length = 221 Score = 59.7 bits (143), Expect = 7e-09 Identities = 38/99 (38%), Positives = 50/99 (50%), Gaps = 11/99 (11%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 +L V L+ RT+ D LR F K+G V + DR T S+GF FVR+ DA ++ Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74 Query: 259 MDGEFLDG---WVIFAEYARP--------RPPPQMGGAT 342 MDG LDG V A Y RP PPP+ G++ Sbjct: 75 MDGAVLDGRELRVQMARYGRPPDSHHSRRGPPPRRYGSS 113
>ELAV2_RAT (Q8CH84) ELAV-like protein 2 (Hu-antigen B) (HuB)| Length = 359 Score = 59.3 bits (142), Expect = 9e-09 Identities = 29/78 (37%), Positives = 44/78 (56%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL + L + T + L+ F GE+E +++ D++TG S G+GFV Y+ +DA K I Sbjct: 40 NLIDNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINT 99 Query: 259 MDGEFLDGWVIFAEYARP 312 ++G L I YARP Sbjct: 100 LNGLRLQTKTIKVSYARP 117 Score = 58.2 bits (139), Expect = 2e-08 Identities = 25/64 (39%), Positives = 44/64 (68%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL+VSGL K T L + F+++G + +R++ D+VTG S+G GF+R+ +A + I+G Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKG 185 Query: 259 MDGE 270 ++G+ Sbjct: 186 LNGQ 189 Score = 39.7 bits (91), Expect = 0.007 Identities = 22/62 (35%), Positives = 31/62 (50%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +FV L+ L + F FG V + +VI D T KGFGFV ++AA I + Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337 Query: 262 DG 267 +G Sbjct: 338 NG 339
>CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 59.3 bits (142), Expect = 9e-09 Identities = 29/75 (38%), Positives = 44/75 (58%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV GLS T L + F+K+G++ V+ DR T S+GFGFV + ++DA + M Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 262 DGEFLDGWVIFAEYA 306 +G+ +DG I + A Sbjct: 68 NGKSVDGRQIRVDQA 82
>CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) Length = 172 Score = 59.3 bits (142), Expect = 9e-09 Identities = 29/75 (38%), Positives = 44/75 (58%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV GLS T L + F+K+G++ V+ DR T S+GFGFV + ++DA + M Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 262 DGEFLDGWVIFAEYA 306 +G+ +DG I + A Sbjct: 68 NGKSVDGRQIRVDQA 82
>CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 59.3 bits (142), Expect = 9e-09 Identities = 29/75 (38%), Positives = 44/75 (58%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV GLS T L + F+K+G++ V+ DR T S+GFGFV + ++DA + M Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 262 DGEFLDGWVIFAEYA 306 +G+ +DG I + A Sbjct: 68 NGKSVDGRQIRVDQA 82
>CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 59.3 bits (142), Expect = 9e-09 Identities = 29/75 (38%), Positives = 44/75 (58%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV GLS T L + F+K+G++ V+ DR T S+GFGFV + ++DA + M Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 262 DGEFLDGWVIFAEYA 306 +G+ +DG I + A Sbjct: 68 NGKSVDGRQIRVDQA 82
>CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 59.3 bits (142), Expect = 9e-09 Identities = 29/75 (38%), Positives = 44/75 (58%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV GLS T L + F+K+G++ V+ DR T S+GFGFV + ++DA + M Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 262 DGEFLDGWVIFAEYA 306 +G+ +DG I + A Sbjct: 68 NGKSVDGRQIRVDQA 82
>SFRS2_RAT (Q6PDU1) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) Length = 220 Score = 59.3 bits (142), Expect = 9e-09 Identities = 33/82 (40%), Positives = 44/82 (53%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 +L V L+ RT+ D LR F K+G V + DR T S+GF FVR+ DA ++ Sbjct: 14 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 73 Query: 259 MDGEFLDGWVIFAEYARPRPPP 324 MDG LDG + + AR PP Sbjct: 74 MDGAVLDGRELRVQMARYGRPP 95
>SFRS2_PANTR (Q5R1W5) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) Length = 220 Score = 59.3 bits (142), Expect = 9e-09 Identities = 33/82 (40%), Positives = 44/82 (53%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 +L V L+ RT+ D LR F K+G V + DR T S+GF FVR+ DA ++ Sbjct: 14 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 73 Query: 259 MDGEFLDGWVIFAEYARPRPPP 324 MDG LDG + + AR PP Sbjct: 74 MDGAVLDGRELRVQMARYGRPP 95
>SFRS2_MOUSE (Q62093) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) (Putative myelin regulatory factor 1) (MRF-1) Length = 220 Score = 59.3 bits (142), Expect = 9e-09 Identities = 33/82 (40%), Positives = 44/82 (53%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 +L V L+ RT+ D LR F K+G V + DR T S+GF FVR+ DA ++ Sbjct: 14 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 73 Query: 259 MDGEFLDGWVIFAEYARPRPPP 324 MDG LDG + + AR PP Sbjct: 74 MDGAVLDGRELRVQMARYGRPP 95
>SFRS2_HUMAN (Q01130) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) Length = 220 Score = 59.3 bits (142), Expect = 9e-09 Identities = 33/82 (40%), Positives = 44/82 (53%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 +L V L+ RT+ D LR F K+G V + DR T S+GF FVR+ DA ++ Sbjct: 14 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 73 Query: 259 MDGEFLDGWVIFAEYARPRPPP 324 MDG LDG + + AR PP Sbjct: 74 MDGAVLDGRELRVQMARYGRPP 95
>ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A)| Length = 273 Score = 58.5 bits (140), Expect = 2e-08 Identities = 31/80 (38%), Positives = 45/80 (56%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 ++V L+ D L F++ G+V A+V+ DR +G S+GFGFV Y + E+ IE + Sbjct: 190 VYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESL 249 Query: 262 DGEFLDGWVIFAEYARPRPP 321 DG L+G I A RPP Sbjct: 250 DGVDLNGRAIRVSPAEARPP 269 Score = 47.4 bits (111), Expect = 4e-05 Identities = 28/82 (34%), Positives = 40/82 (48%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +FV L + L E F + G VE VI D++TG S+GFGFV + E+ + Sbjct: 89 IFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQF 148 Query: 262 DGEFLDGWVIFAEYARPRPPPQ 327 +G LDG + PPP+ Sbjct: 149 NGYELDGRAL---RVNSGPPPE 167
>ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30)| Length = 279 Score = 58.5 bits (140), Expect = 2e-08 Identities = 31/80 (38%), Positives = 45/80 (56%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 ++V L+ D L F++ G+V A+V+ DR +G S+GFGFV Y + E+ IE + Sbjct: 196 VYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESL 255 Query: 262 DGEFLDGWVIFAEYARPRPP 321 DG L+G I A RPP Sbjct: 256 DGVDLNGRAIRVSPAEARPP 275 Score = 47.0 bits (110), Expect = 5e-05 Identities = 28/82 (34%), Positives = 40/82 (48%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +FV L + L E F + G VE VI D++TG S+GFGFV + E+ + Sbjct: 89 IFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQF 148 Query: 262 DGEFLDGWVIFAEYARPRPPPQ 327 +G LDG + PPP+ Sbjct: 149 NGYELDGRAL---RVNSGPPPE 167
>ELAV3_MOUSE (Q60900) ELAV-like protein 3 (Hu-antigen C) (HuC)| Length = 367 Score = 58.2 bits (139), Expect = 2e-08 Identities = 29/78 (37%), Positives = 42/78 (53%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL V+ L + T D + F G++E +++ D++TG S G+GFV Y DA K I Sbjct: 40 NLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINT 99 Query: 259 MDGEFLDGWVIFAEYARP 312 ++G L I YARP Sbjct: 100 LNGLKLQTKTIKVSYARP 117 Score = 53.5 bits (127), Expect = 5e-07 Identities = 22/64 (34%), Positives = 43/64 (67%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL+VSGL K + + + F+++G + +R++ D+ TG S+G GF+R+ +A + I+G Sbjct: 126 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKG 185 Query: 259 MDGE 270 ++G+ Sbjct: 186 LNGQ 189 Score = 43.1 bits (100), Expect = 7e-04 Identities = 23/62 (37%), Positives = 31/62 (50%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +FV LS L + F FG V + +VI D T KGFGFV ++AA I + Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 345 Query: 262 DG 267 +G Sbjct: 346 NG 347
>ELAV3_HUMAN (Q14576) ELAV-like protein 3 (Hu-antigen C) (HuC) (Paraneoplastic| cerebellar degeneration-associated antigen) (Paraneoplastic limbic encephalitis antigen 21) Length = 367 Score = 58.2 bits (139), Expect = 2e-08 Identities = 29/78 (37%), Positives = 42/78 (53%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL V+ L + T D + F G++E +++ D++TG S G+GFV Y DA K I Sbjct: 40 NLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINT 99 Query: 259 MDGEFLDGWVIFAEYARP 312 ++G L I YARP Sbjct: 100 LNGLKLQTKTIKVSYARP 117 Score = 55.5 bits (132), Expect = 1e-07 Identities = 23/64 (35%), Positives = 44/64 (68%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL+VSGL K + + + F+++G + +R++ D+VTG S+G GF+R+ +A + I+G Sbjct: 126 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKG 185 Query: 259 MDGE 270 ++G+ Sbjct: 186 LNGQ 189 Score = 43.1 bits (100), Expect = 7e-04 Identities = 23/62 (37%), Positives = 31/62 (50%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +FV LS L + F FG V + +VI D T KGFGFV ++AA I + Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 345 Query: 262 DG 267 +G Sbjct: 346 NG 347
>RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) (RNPL) Length = 157 Score = 58.2 bits (139), Expect = 2e-08 Identities = 31/85 (36%), Positives = 44/85 (51%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV GL+ T L + F+ FG + V+ DR T S+GFGF+ + E A+ + M Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAM 67 Query: 262 DGEFLDGWVIFAEYARPRPPPQMGG 336 +GE LDG I ++A GG Sbjct: 68 NGESLDGRQIRVDHAGKSARGTRGG 92
>ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloroplast| precursor Length = 289 Score = 58.2 bits (139), Expect = 2e-08 Identities = 33/80 (41%), Positives = 44/80 (55%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 ++V LS L F++ G+V ARVI DR +G SKGFGFV Y + ++ I+ + Sbjct: 206 VYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSL 265 Query: 262 DGEFLDGWVIFAEYARPRPP 321 DG LDG I A RPP Sbjct: 266 DGADLDGRQIRVSEAEARPP 285 Score = 48.1 bits (113), Expect = 2e-05 Identities = 30/85 (35%), Positives = 41/85 (48%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV L + L + F G VE VI D++TG S+GFGFV +V + + Sbjct: 93 LFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQF 152 Query: 262 DGEFLDGWVIFAEYARPRPPPQMGG 336 +G LDG + A P PP + G Sbjct: 153 NGYELDGRPLRVN-AGPPPPKREDG 176
>ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein RNP-T) (RNA-binding protein 1/2/3) (AtRBP33) (RNA-binding protein cp31) Length = 329 Score = 57.4 bits (137), Expect = 3e-08 Identities = 30/80 (37%), Positives = 44/80 (55%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 ++V L L + F++ G+V ARV+ DR TG S+GFGFV V++ + I + Sbjct: 246 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 305 Query: 262 DGEFLDGWVIFAEYARPRPP 321 DG+ L+G I A RPP Sbjct: 306 DGQNLEGRAIRVNVAEERPP 325 Score = 46.6 bits (109), Expect = 6e-05 Identities = 28/78 (35%), Positives = 41/78 (52%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV L+ + L F + G VE A VI +R T S+GFGFV +V++A +E Sbjct: 152 LFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKF 211 Query: 262 DGEFLDGWVIFAEYARPR 315 + L+G ++ A PR Sbjct: 212 NRYDLNGRLLTVNKAAPR 229
>GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10| Length = 169 Score = 57.4 bits (137), Expect = 3e-08 Identities = 33/84 (39%), Positives = 46/84 (54%) Frame = +1 Query: 85 FVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGMD 264 FV GL+ T L F++FGEV +++I DR TG S+GFGFV + + I+ M+ Sbjct: 9 FVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMN 68 Query: 265 GEFLDGWVIFAEYARPRPPPQMGG 336 G+ LDG I A+ R GG Sbjct: 69 GKELDGRTITVNEAQSRGGGGGGG 92
>PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 57.0 bits (136), Expect = 5e-08 Identities = 30/79 (37%), Positives = 46/79 (58%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+FV + + L+E F ++G E +VI D +G SKGFGFVRY T E A K + Sbjct: 200 NVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLD 258 Query: 259 MDGEFLDGWVIFAEYARPR 315 + G+ +DG V++ A+ + Sbjct: 259 LHGKSIDGKVLYVGRAQKK 277 Score = 43.1 bits (100), Expect = 7e-04 Identities = 19/65 (29%), Positives = 37/65 (56%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +++ L + + L+E F+ FG + A+V+ + G KGFG V + + E+A K ++ M Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361 Query: 262 DGEFL 276 +G + Sbjct: 362 NGRIV 366 Score = 32.7 bits (73), Expect = 0.91 Identities = 19/72 (26%), Positives = 35/72 (48%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+F+ L K L F+ FG + +V+ D SKG+ +V + ++ A + I Sbjct: 107 NIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWH 164 Query: 259 MDGEFLDGWVIF 294 M+G L+ ++ Sbjct: 165 MNGVRLNNRQVY 176
>PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 57.0 bits (136), Expect = 5e-08 Identities = 30/79 (37%), Positives = 46/79 (58%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+FV + + L+E F ++G E +VI D +G SKGFGFVRY T E A K + Sbjct: 200 NVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLD 258 Query: 259 MDGEFLDGWVIFAEYARPR 315 + G+ +DG V++ A+ + Sbjct: 259 LHGKSIDGKVLYVGRAQKK 277 Score = 43.1 bits (100), Expect = 7e-04 Identities = 19/65 (29%), Positives = 37/65 (56%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +++ L + + L+E F+ FG + A+V+ + G KGFG V + + E+A K ++ M Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361 Query: 262 DGEFL 276 +G + Sbjct: 362 NGRIV 366 Score = 32.7 bits (73), Expect = 0.91 Identities = 19/72 (26%), Positives = 35/72 (48%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+F+ L K L F+ FG + +V+ D SKG+ +V + ++ A + I Sbjct: 107 NIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWH 164 Query: 259 MDGEFLDGWVIF 294 M+G L+ ++ Sbjct: 165 MNGVRLNNRQVY 176
>PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 57.0 bits (136), Expect = 5e-08 Identities = 30/79 (37%), Positives = 46/79 (58%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+FV + + L+E F ++G E +VI D +G SKGFGFVRY T E A K + Sbjct: 200 NVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLD 258 Query: 259 MDGEFLDGWVIFAEYARPR 315 + G+ +DG V++ A+ + Sbjct: 259 LHGKSIDGKVLYVGRAQKK 277 Score = 42.7 bits (99), Expect = 9e-04 Identities = 19/62 (30%), Positives = 36/62 (58%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +++ L + + L+E F+ FG + A+V+ + G KGFG V + + E+A K ++ M Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361 Query: 262 DG 267 +G Sbjct: 362 NG 363 Score = 32.7 bits (73), Expect = 0.91 Identities = 19/72 (26%), Positives = 35/72 (48%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+F+ L K L F+ FG + +V+ D SKG+ +V + ++ A + I Sbjct: 107 NIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWH 164 Query: 259 MDGEFLDGWVIF 294 M+G L+ ++ Sbjct: 165 MNGVRLNNRQVY 176
>PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 57.0 bits (136), Expect = 5e-08 Identities = 30/79 (37%), Positives = 46/79 (58%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+FV + + L+E F ++G E +VI D +G SKGFGFVRY T E A K + Sbjct: 200 NVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLD 258 Query: 259 MDGEFLDGWVIFAEYARPR 315 + G+ +DG V++ A+ + Sbjct: 259 LHGKSIDGKVLYVGRAQKK 277 Score = 43.1 bits (100), Expect = 7e-04 Identities = 19/65 (29%), Positives = 37/65 (56%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +++ L + + L+E F+ FG + A+V+ + G KGFG V + + E+A K ++ M Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361 Query: 262 DGEFL 276 +G + Sbjct: 362 NGRIV 366 Score = 32.7 bits (73), Expect = 0.91 Identities = 19/72 (26%), Positives = 35/72 (48%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+F+ L K L F+ FG + +V+ D SKG+ +V + ++ A + I Sbjct: 107 NIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWH 164 Query: 259 MDGEFLDGWVIF 294 M+G L+ ++ Sbjct: 165 MNGVRLNNRQVY 176
>PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 57.0 bits (136), Expect = 5e-08 Identities = 30/79 (37%), Positives = 46/79 (58%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+FV + + L+E F ++G E +VI D +G SKGFGFVRY T E A K + Sbjct: 200 NVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLD 258 Query: 259 MDGEFLDGWVIFAEYARPR 315 + G+ +DG V++ A+ + Sbjct: 259 LHGKSIDGKVLYVGRAQKK 277 Score = 43.1 bits (100), Expect = 7e-04 Identities = 19/65 (29%), Positives = 37/65 (56%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +++ L + + L+E F+ FG + A+V+ + G KGFG V + + E+A K ++ M Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361 Query: 262 DGEFL 276 +G + Sbjct: 362 NGRIV 366 Score = 32.7 bits (73), Expect = 0.91 Identities = 19/72 (26%), Positives = 35/72 (48%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+F+ L K L F+ FG + +V+ D SKG+ +V + ++ A + I Sbjct: 107 NIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWH 164 Query: 259 MDGEFLDGWVIF 294 M+G L+ ++ Sbjct: 165 MNGVRLNNRQVY 176
>PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 57.0 bits (136), Expect = 5e-08 Identities = 30/79 (37%), Positives = 46/79 (58%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+FV + + L+E F ++G E +VI D +G SKGFGFVRY T E A K + Sbjct: 200 NVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLD 258 Query: 259 MDGEFLDGWVIFAEYARPR 315 + G+ +DG V++ A+ + Sbjct: 259 LHGKSIDGKVLYVGRAQKK 277 Score = 43.1 bits (100), Expect = 7e-04 Identities = 19/65 (29%), Positives = 37/65 (56%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +++ L + + L+E F+ FG + A+V+ + G KGFG V + + E+A K ++ M Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361 Query: 262 DGEFL 276 +G + Sbjct: 362 NGRIV 366 Score = 32.7 bits (73), Expect = 0.91 Identities = 19/72 (26%), Positives = 35/72 (48%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+F+ L K L F+ FG + +V+ D SKG+ +V + ++ A + I Sbjct: 107 NIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWH 164 Query: 259 MDGEFLDGWVIF 294 M+G L+ ++ Sbjct: 165 MNGVRLNNRQVY 176
>PABP2_ARATH (P42731) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PABP 2) Length = 629 Score = 57.0 bits (136), Expect = 5e-08 Identities = 27/67 (40%), Positives = 43/67 (64%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N++V L++ TT D L+ AF ++G++ A V+ D G SKGFGFV + +DAA+ +E Sbjct: 216 NVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDG-EGKSKGFGFVNFENADDAARAVES 274 Query: 259 MDGEFLD 279 ++G D Sbjct: 275 LNGHKFD 281 Score = 48.9 bits (115), Expect = 1e-05 Identities = 24/67 (35%), Positives = 37/67 (55%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+F+ L + L + F+ FG + +V D +G SKG+GFV+Y E A K IE Sbjct: 125 NIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDS-SGQSKGYGFVQYANEESAQKAIEK 183 Query: 259 MDGEFLD 279 ++G L+ Sbjct: 184 LNGMLLN 190 Score = 47.4 bits (111), Expect = 4e-05 Identities = 24/77 (31%), Positives = 43/77 (55%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL+V L + + L+E F+ FG V ++V+ D G SKG GFV + T E+A + + Sbjct: 319 NLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDP-NGTSKGSGFVAFATPEEATEAMSQ 377 Query: 259 MDGEFLDGWVIFAEYAR 309 + G+ ++ ++ A+ Sbjct: 378 LSGKMIESKPLYVAIAQ 394 Score = 45.8 bits (107), Expect = 1e-04 Identities = 29/87 (33%), Positives = 43/87 (49%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 +L+V L T L +AF + G V RV D VT S G+G+V + +DAA+ I+ Sbjct: 37 SLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQE 96 Query: 259 MDGEFLDGWVIFAEYARPRPPPQMGGA 339 ++ L G I Y+ P + GA Sbjct: 97 LNYIPLYGKPIRVMYSHRDPSVRRSGA 123
>MSI1H_RAT (Q8K3P4) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 56.6 bits (135), Expect = 6e-08 Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 4/82 (4%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDA----AKG 249 +F+ GLS +TT +GLRE F +FGEV+ V+ D +T S+GFGFV ++ A+ Sbjct: 22 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 81 Query: 250 IEGMDGEFLDGWVIFAEYARPR 315 +D + +D V F A+P+ Sbjct: 82 RHELDSKTIDPKVAFPRRAQPK 103 Score = 45.1 bits (105), Expect = 2e-04 Identities = 21/58 (36%), Positives = 35/58 (60%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIE 255 +FV GLS TT + ++ F +FG+V+ A ++ D+ T +GFGFV + + + K E Sbjct: 111 IFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
>MSI1H_MOUSE (Q61474) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 56.6 bits (135), Expect = 6e-08 Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 4/82 (4%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDA----AKG 249 +F+ GLS +TT +GLRE F +FGEV+ V+ D +T S+GFGFV ++ A+ Sbjct: 22 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 81 Query: 250 IEGMDGEFLDGWVIFAEYARPR 315 +D + +D V F A+P+ Sbjct: 82 RHELDSKTIDPKVAFPRRAQPK 103 Score = 45.1 bits (105), Expect = 2e-04 Identities = 21/58 (36%), Positives = 35/58 (60%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIE 255 +FV GLS TT + ++ F +FG+V+ A ++ D+ T +GFGFV + + + K E Sbjct: 111 IFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
>MSI1H_HUMAN (O43347) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 56.6 bits (135), Expect = 6e-08 Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 4/82 (4%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDA----AKG 249 +F+ GLS +TT +GLRE F +FGEV+ V+ D +T S+GFGFV ++ A+ Sbjct: 22 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 81 Query: 250 IEGMDGEFLDGWVIFAEYARPR 315 +D + +D V F A+P+ Sbjct: 82 RHELDSKTIDPKVAFPRRAQPK 103 Score = 45.8 bits (107), Expect = 1e-04 Identities = 21/58 (36%), Positives = 36/58 (62%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIE 255 +FV GLS TT + +++ F +FG+V+ A ++ D+ T +GFGFV + + + K E Sbjct: 111 IFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
>ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP)| Length = 233 Score = 56.2 bits (134), Expect = 8e-08 Identities = 29/79 (36%), Positives = 43/79 (54%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 ++V L T L + F++ G+V ARV++DR TG S+GFGFV + + I + Sbjct: 151 VYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAAL 210 Query: 262 DGEFLDGWVIFAEYARPRP 318 DG+ LDG + A RP Sbjct: 211 DGQTLDGRAVRVNVAEERP 229 Score = 54.3 bits (129), Expect = 3e-07 Identities = 33/82 (40%), Positives = 44/82 (53%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV L ++ L F G VE A VI +R T S+GFGFV TVE+A K +E + Sbjct: 57 LFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELL 116 Query: 262 DGEFLDGWVIFAEYARPRPPPQ 327 +G +DG + A PR P+ Sbjct: 117 NGYDMDGRQLTVNKAAPRGSPE 138
>PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-binding protein| 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein 1) (APP-1) Length = 644 Score = 55.8 bits (133), Expect = 1e-07 Identities = 28/79 (35%), Positives = 46/79 (58%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+++ + + L+E F++FG+ +V+ D G SKGFGFV Y EDA K +E Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEE 250 Query: 259 MDGEFLDGWVIFAEYARPR 315 M+G+ + G +IF A+ + Sbjct: 251 MNGKEISGKIIFVGRAQKK 269 Score = 46.6 bits (109), Expect = 6e-05 Identities = 24/77 (31%), Positives = 42/77 (54%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL++ L + LR+ F+ FG + A+V+ + G SKGFGFV + + E+A K + Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTE 352 Query: 259 MDGEFLDGWVIFAEYAR 309 M+G + ++ A+ Sbjct: 353 MNGRIVGSKPLYVALAQ 369 Score = 45.8 bits (107), Expect = 1e-04 Identities = 25/72 (34%), Positives = 37/72 (51%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+F+ L K L + F+ FG + +V+ D SKG+ FV + T E A K IE Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEK 157 Query: 259 MDGEFLDGWVIF 294 M+G L+ +F Sbjct: 158 MNGMLLNDRKVF 169
>RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-rich 4| (RNA-binding protein srp-2) (CeSC35) Length = 196 Score = 55.8 bits (133), Expect = 1e-07 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 3/81 (3%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 +L + LS +TT + LR F ++G++ + D+ + SKGFGFVR+ DA ++ Sbjct: 20 SLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDR 79 Query: 259 MDGEFLDG---WVIFAEYARP 312 DG+ +DG V A+Y RP Sbjct: 80 TDGKLVDGRELRVTLAKYDRP 100
>HNRPG_HUMAN (P38159) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) (Glycoprotein p43) Length = 391 Score = 55.8 bits (133), Expect = 1e-07 Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 10/95 (10%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ GL+ T L F K+G + ++ DR T S+GF FV + + DA M Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69 Query: 262 DGEFLDGWVIFAEYAR----------PRPPPQMGG 336 +G+ LDG I E A P PPP+ G Sbjct: 70 NGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRG 104
>TRA2A_MOUSE (Q6PFR5) Transformer-2 protein homolog (TRA-2 alpha)| Length = 281 Score = 55.5 bits (132), Expect = 1e-07 Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 6/93 (6%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L V GLS TT LRE F+++G + V+ D+ TG S+GF FV + ++D+ + +E Sbjct: 119 LGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERA 178 Query: 262 DGEFLDGWVIFAEYA------RPRPPPQMGGAT 342 +G LDG I +Y+ P P MG T Sbjct: 179 NGMELDGRRIRVDYSITKRAHTPTPGIYMGRPT 211
>TRA2A_HUMAN (Q13595) Transformer-2 protein homolog (TRA-2 alpha)| Length = 282 Score = 55.5 bits (132), Expect = 1e-07 Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 6/93 (6%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L V GLS TT LRE F+++G + V+ D+ TG S+GF FV + ++D+ + +E Sbjct: 121 LGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERA 180 Query: 262 DGEFLDGWVIFAEYA------RPRPPPQMGGAT 342 +G LDG I +Y+ P P MG T Sbjct: 181 NGMELDGRRIRVDYSITKRAHTPTPGIYMGRPT 213
>IF34_MOUSE (Q9Z1D1) Eukaryotic translation initiation factor 3 subunit 4| (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3 p42) (Eif3p42) (eIF3g) Length = 320 Score = 55.5 bits (132), Expect = 1e-07 Identities = 28/75 (37%), Positives = 42/75 (56%) Frame = +1 Query: 88 VSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGMDG 267 V+ LS+ T L+E F FG + + D+ TG SKGF F+ + EDAA+ I G+ G Sbjct: 243 VTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSG 302 Query: 268 EFLDGWVIFAEYARP 312 D ++ E+A+P Sbjct: 303 FGYDHLILNVEWAKP 317
>IF34_HUMAN (O75821) Eukaryotic translation initiation factor 3 subunit 4| (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3 p42) (eIF3g) Length = 320 Score = 55.5 bits (132), Expect = 1e-07 Identities = 28/75 (37%), Positives = 42/75 (56%) Frame = +1 Query: 88 VSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGMDG 267 V+ LS+ T L+E F FG + + D+ TG SKGF F+ + EDAA+ I G+ G Sbjct: 243 VTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSG 302 Query: 268 EFLDGWVIFAEYARP 312 D ++ E+A+P Sbjct: 303 FGYDHLILNVEWAKP 317
>ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein cp29) Length = 342 Score = 55.1 bits (131), Expect = 2e-07 Identities = 33/80 (41%), Positives = 42/80 (52%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L+V LS L F + G+V ARVI DR +G SKGFGFV + ++ K I + Sbjct: 259 LYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSL 318 Query: 262 DGEFLDGWVIFAEYARPRPP 321 +G LDG I A RPP Sbjct: 319 NGADLDGRQIRVSEAEARPP 338 Score = 45.8 bits (107), Expect = 1e-04 Identities = 29/80 (36%), Positives = 38/80 (47%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV LS + L + F G VE VI D+VTG S+GFGFV T + + Sbjct: 101 LFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQF 160 Query: 262 DGEFLDGWVIFAEYARPRPP 321 +G +G + A P PP Sbjct: 161 NGYEFEGRPLRVN-AGPPPP 179
>GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment)| Length = 142 Score = 55.1 bits (131), Expect = 2e-07 Identities = 31/73 (42%), Positives = 42/73 (57%) Frame = +1 Query: 118 DGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGMDGEFLDGWVIFA 297 + L AF+ +GEV +++I DR T S+GFGFV + T E IEGM+G+ LDG I Sbjct: 1 NSLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITV 60 Query: 298 EYARPRPPPQMGG 336 A+ R GG Sbjct: 61 NEAQSRGGRGGGG 73
>DRBP1_RAT (Q8CFD1) Developmentally-regulated RNA-binding protein 1| Length = 476 Score = 55.1 bits (131), Expect = 2e-07 Identities = 26/59 (44%), Positives = 37/59 (62%) Frame = +1 Query: 97 LSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGMDGEF 273 + K T + LRE F +G++E+ VI ++VTG SKG G+VRY+ AA+ IE D F Sbjct: 127 IPKSYTEEDLREKFKVYGDIEYCSVIKNKVTGESKGLGYVRYLKPSQAAQAIENCDRSF 185 Score = 45.1 bits (105), Expect = 2e-04 Identities = 22/60 (36%), Positives = 35/60 (58%) Frame = +1 Query: 97 LSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGMDGEFL 276 +SK T+ LRE F+ FG+++ V+ D+ T SKG FV++ A + +E M G+ L Sbjct: 32 ISKYTSESVLREHFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCL 91
>DRBP1_MOUSE (Q8BHN5) Developmentally-regulated RNA-binding protein 1 (RB-1)| Length = 476 Score = 54.7 bits (130), Expect = 2e-07 Identities = 25/59 (42%), Positives = 37/59 (62%) Frame = +1 Query: 97 LSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGMDGEF 273 + K T + LRE F +G++E+ +I ++VTG SKG G+VRY+ AA+ IE D F Sbjct: 127 IPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIENCDRSF 185 Score = 44.3 bits (103), Expect = 3e-04 Identities = 22/60 (36%), Positives = 35/60 (58%) Frame = +1 Query: 97 LSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGMDGEFL 276 +SK T+ LRE F+ FG+++ V+ D+ T SKG FV++ A + +E M G+ L Sbjct: 32 ISKHTSELVLRERFSPFGDIQDIWVVRDKHTKESKGVAFVKFARSSQACRAMEEMHGQCL 91
>DRBP1_HUMAN (Q8IUH3) Developmentally-regulated RNA-binding protein 1 (RB-1)| Length = 476 Score = 54.7 bits (130), Expect = 2e-07 Identities = 25/59 (42%), Positives = 37/59 (62%) Frame = +1 Query: 97 LSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGMDGEF 273 + K T + LRE F +G++E+ +I ++VTG SKG G+VRY+ AA+ IE D F Sbjct: 127 IPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIENCDRSF 185 Score = 44.7 bits (104), Expect = 2e-04 Identities = 22/60 (36%), Positives = 34/60 (56%) Frame = +1 Query: 97 LSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGMDGEFL 276 +SK T LRE F+ FG+++ V+ D+ T SKG FV++ A + +E M G+ L Sbjct: 32 ISKYTPESVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCL 91
>HNRPG_RAT (P84586) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) Length = 388 Score = 54.3 bits (129), Expect = 3e-07 Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 10/95 (10%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ GL+ T L F K+G + ++ DR T S+GF FV + + DA M Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARDM 69 Query: 262 DGEFLDGWVIFAEYAR----------PRPPPQMGG 336 +G+ LDG I E A P PPP+ G Sbjct: 70 NGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRG 104
>MSI2H_MOUSE (Q920Q6) RNA-binding protein Musashi homolog 2 (Musashi-2)| Length = 346 Score = 54.3 bits (129), Expect = 3e-07 Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGI--- 252 +F+ GLS +T+ D LR+ F+KFGE+ V+ D T S+GFGFV + K + Sbjct: 23 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 82 Query: 253 -EGMDGEFLDGWVIFAEYARPR 315 +D + +D V F A+P+ Sbjct: 83 HHELDSKTIDPKVAFPRRAQPK 104 Score = 46.6 bits (109), Expect = 6e-05 Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 4/90 (4%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +FV GLS T + +++ F +FG+VE A ++ D+ T +GFGFV + ED + + + Sbjct: 112 IFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFEN-EDVVEKVCEI 170 Query: 262 DGEFLDGWVIFAEYARPR----PPPQMGGA 339 ++ ++ + A+P+ PP G A Sbjct: 171 HFHEINNKMVECKKAQPKEVMFPPGTRGRA 200
>MSI2H_HUMAN (Q96DH6) RNA-binding protein Musashi homolog 2 (Musashi-2)| Length = 328 Score = 54.3 bits (129), Expect = 3e-07 Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGI--- 252 +F+ GLS +T+ D LR+ F+KFGE+ V+ D T S+GFGFV + K + Sbjct: 23 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 82 Query: 253 -EGMDGEFLDGWVIFAEYARPR 315 +D + +D V F A+P+ Sbjct: 83 HHELDSKTIDPKVAFPRRAQPK 104 Score = 46.6 bits (109), Expect = 6e-05 Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 4/90 (4%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +FV GLS T + +++ F +FG+VE A ++ D+ T +GFGFV + ED + + + Sbjct: 112 IFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFEN-EDVVEKVCEI 170 Query: 262 DGEFLDGWVIFAEYARPR----PPPQMGGA 339 ++ ++ + A+P+ PP G A Sbjct: 171 HFHEINNKMVECKKAQPKEVMFPPGTRGRA 200
>PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear| (Poly(A)-binding protein) (PABP) (ARS consensus-binding protein ACBP-67) (Polyadenylate tail-binding protein) Length = 576 Score = 53.9 bits (128), Expect = 4e-07 Identities = 29/79 (36%), Positives = 44/79 (55%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL+V ++ TT + +E FAKFG + A + D G KGFGFV Y EDA K +E Sbjct: 219 NLYVKNINSETTDEQFQELFAKFGPIVSASLEKD-ADGKLKGFGFVNYEKHEDAVKAVEA 277 Query: 259 MDGEFLDGWVIFAEYARPR 315 ++ L+G ++ A+ + Sbjct: 278 LNDSELNGEKLYVGRAQKK 296 Score = 46.6 bits (109), Expect = 6e-05 Identities = 27/77 (35%), Positives = 40/77 (51%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NLFV L + L E FA +G + A+V+ G SKGFGFV + T E+A K I Sbjct: 322 NLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTE-NGKSKGFGFVCFSTPEEATKAITE 380 Query: 259 MDGEFLDGWVIFAEYAR 309 + + + G ++ A+ Sbjct: 381 KNQQIVAGKPLYVAIAQ 397 Score = 45.1 bits (105), Expect = 2e-04 Identities = 23/72 (31%), Positives = 39/72 (54%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+F+ L L + F+ FG++ +++ TD G SKGFGFV + A + I+ Sbjct: 126 NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDA 184 Query: 259 MDGEFLDGWVIF 294 ++G L+G I+ Sbjct: 185 LNGMLLNGQEIY 196
>PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 668 Score = 53.9 bits (128), Expect = 4e-07 Identities = 29/79 (36%), Positives = 48/79 (60%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N++V L K T D L++ F K+G++ A V+ D+ +G S+ FGFV +V+ E AA +E Sbjct: 226 NVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQ-SGNSRSFGFVNFVSPEAAAVAVEK 284 Query: 259 MDGEFLDGWVIFAEYARPR 315 M+G L V++ A+ + Sbjct: 285 MNGISLGEDVLYVGRAQKK 303 Score = 44.3 bits (103), Expect = 3e-04 Identities = 23/83 (27%), Positives = 44/83 (53%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL++ L + L+E F+++G V +V+ + G S+GFGFV Y E+A ++ Sbjct: 329 NLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNS-QGLSRGFGFVAYSNPEEALLAMKE 387 Query: 259 MDGEFLDGWVIFAEYARPRPPPQ 327 M+G+ + ++ A+ + Q Sbjct: 388 MNGKMIGRKPLYVALAQRKEERQ 410 Score = 43.9 bits (102), Expect = 4e-04 Identities = 24/72 (33%), Positives = 37/72 (51%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+F+ L L E F+ FG + +V D V G SKG+GFV++ E A I+ Sbjct: 133 NVFIKNLDASIDNKALYETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEKEETAQAAIDK 191 Query: 259 MDGEFLDGWVIF 294 ++G L+ +F Sbjct: 192 LNGMLLNDKQVF 203
>PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 53.5 bits (127), Expect = 5e-07 Identities = 28/79 (35%), Positives = 46/79 (58%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+++ + + L+E F KFG +V+TD +G SKGFGFV + EDA K ++ Sbjct: 192 NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDE 250 Query: 259 MDGEFLDGWVIFAEYARPR 315 M+G+ L+G I+ A+ + Sbjct: 251 MNGKELNGKQIYVGRAQKK 269 Score = 47.8 bits (112), Expect = 3e-05 Identities = 25/72 (34%), Positives = 38/72 (52%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+F+ L K L + F+ FG + +V+ D SKG+GFV + T E A + IE Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEK 157 Query: 259 MDGEFLDGWVIF 294 M+G L+ +F Sbjct: 158 MNGMLLNDRKVF 169 Score = 45.1 bits (105), Expect = 2e-04 Identities = 24/66 (36%), Positives = 38/66 (57%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL+V L + LR+ F+ FG + A+V+ + G SKGFGFV + + E+A K + Sbjct: 295 NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTE 352 Query: 259 MDGEFL 276 M+G + Sbjct: 353 MNGRIV 358
>PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 53.5 bits (127), Expect = 5e-07 Identities = 28/79 (35%), Positives = 46/79 (58%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+++ + + L+E F KFG +V+TD +G SKGFGFV + EDA K ++ Sbjct: 192 NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDE 250 Query: 259 MDGEFLDGWVIFAEYARPR 315 M+G+ L+G I+ A+ + Sbjct: 251 MNGKELNGKQIYVGRAQKK 269 Score = 47.8 bits (112), Expect = 3e-05 Identities = 25/72 (34%), Positives = 38/72 (52%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+F+ L K L + F+ FG + +V+ D SKG+GFV + T E A + IE Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEK 157 Query: 259 MDGEFLDGWVIF 294 M+G L+ +F Sbjct: 158 MNGMLLNDRKVF 169 Score = 45.1 bits (105), Expect = 2e-04 Identities = 24/66 (36%), Positives = 38/66 (57%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL+V L + LR+ F+ FG + A+V+ + G SKGFGFV + + E+A K + Sbjct: 295 NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTE 352 Query: 259 MDGEFL 276 M+G + Sbjct: 353 MNGRIV 358
>HNRPG_MOUSE (O35479) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) Length = 388 Score = 53.5 bits (127), Expect = 5e-07 Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 10/95 (10%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ GL+ T L F K+G + ++ DR T S+GF FV + DA M Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKDAARDM 69 Query: 262 DGEFLDGWVIFAEYAR----------PRPPPQMGG 336 +G+ LDG I E A P PPP+ G Sbjct: 70 NGKSLDGKAIKVEQATKPFFESGRRGPPPPPRSRG 104
>PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-binding protein)| (PABP) Length = 653 Score = 53.1 bits (126), Expect = 7e-07 Identities = 28/77 (36%), Positives = 42/77 (54%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NLF+ L + L+ F+ FG + A+++TD G SKGFGFV Y T E+A K + Sbjct: 365 NLFIKNLQDEVDDERLKAEFSAFGTITSAKIMTDE-QGKSKGFGFVCYTTPEEANKAVTE 423 Query: 259 MDGEFLDGWVIFAEYAR 309 M+ L G ++ A+ Sbjct: 424 MNQRMLAGKPLYVALAQ 440 Score = 43.9 bits (102), Expect = 4e-04 Identities = 22/67 (32%), Positives = 37/67 (55%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+F+ L L + F+ FG++ +V D + G +KG+GFV + +VE A IE Sbjct: 169 NVFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDEL-GNAKGYGFVHFDSVESANAAIEH 227 Query: 259 MDGEFLD 279 ++G L+ Sbjct: 228 VNGMLLN 234 Score = 37.7 bits (86), Expect = 0.028 Identities = 19/79 (24%), Positives = 38/79 (48%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+++ L T + F +FGE+ ++ D+ +GFGFV Y E A K ++ Sbjct: 262 NVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQ-NDKPRGFGFVNYANHECAQKAVDE 320 Query: 259 MDGEFLDGWVIFAEYARPR 315 ++ + G ++ A+ + Sbjct: 321 LNDKEYKGKKLYVGRAQKK 339
>NAM8_YEAST (Q00539) Protein NAM8| Length = 523 Score = 53.1 bits (126), Expect = 7e-07 Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 1/115 (0%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFA-KFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIE 255 ++FV L+ T L E F ++ HA+++ D+VTG SKG+GFV++ ++ + Sbjct: 164 SIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALS 223 Query: 256 GMDGEFLDGWVIFAEYARPRPPPQMGGATXXXXXXXXXXXXXXXXXXMKGQSFYS 420 M G FL+G I + G KGQSF S Sbjct: 224 EMQGVFLNGRAIKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLS 278 Score = 36.2 bits (82), Expect = 0.082 Identities = 22/62 (35%), Positives = 29/62 (46%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +F+ GLS T D LR F FG + + ++ K GFV+YV A I GM Sbjct: 315 VFIGGLSSLVTEDELRAYFQPFGTIVYVKIPV------GKCCGFVQYVDRLSAEAAIAGM 368 Query: 262 DG 267 G Sbjct: 369 QG 370
>HRP1_YEAST (Q99383) Nuclear polyadenylated RNA-binding protein 4 (Cleavage| factor IB) (CFIB) Length = 534 Score = 52.8 bits (125), Expect = 8e-07 Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 3/69 (4%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRY---VTVEDAAKGI 252 +F+ GL+ TT D LRE F K+G V +++ D TG S+GFGF+ + +V++ K Sbjct: 161 MFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKTQ 220 Query: 253 EGMDGEFLD 279 +DG+ +D Sbjct: 221 HILDGKVID 229 Score = 38.9 bits (89), Expect = 0.013 Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 1/67 (1%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +FV G+ E F+++G + A+++ D+ TG S+GFGFV Y D+A ++ + Sbjct: 245 IFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTY----DSADAVDRV 300 Query: 262 -DGEFLD 279 +F+D Sbjct: 301 CQNKFID 307
>ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP)| Length = 276 Score = 52.4 bits (124), Expect = 1e-06 Identities = 32/78 (41%), Positives = 43/78 (55%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV L ++GL + F + G VE A VI +R T S+GFGFV TVE+A K +E Sbjct: 99 LFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVELY 158 Query: 262 DGEFLDGWVIFAEYARPR 315 L+G ++ A PR Sbjct: 159 SQYDLNGRLLTVNKAAPR 176 Score = 52.0 bits (123), Expect = 1e-06 Identities = 26/65 (40%), Positives = 39/65 (60%) Frame = +1 Query: 124 LREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGMDGEFLDGWVIFAEY 303 L + F++ G+V ARV+ DR +G S+GFGFV + + ++ I +DG+ LDG I Sbjct: 207 LEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRVNA 266 Query: 304 ARPRP 318 A RP Sbjct: 267 AEERP 271
>PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 52.4 bits (124), Expect = 1e-06 Identities = 27/79 (34%), Positives = 46/79 (58%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+++ + + L++ F KFG +V+TD +G SKGFGFV + EDA K ++ Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDE 250 Query: 259 MDGEFLDGWVIFAEYARPR 315 M+G+ L+G I+ A+ + Sbjct: 251 MNGKELNGKQIYVGRAQKK 269 Score = 47.8 bits (112), Expect = 3e-05 Identities = 25/72 (34%), Positives = 38/72 (52%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+F+ L K L + F+ FG + +V+ D SKG+GFV + T E A + IE Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEK 157 Query: 259 MDGEFLDGWVIF 294 M+G L+ +F Sbjct: 158 MNGMLLNDRKVF 169 Score = 45.1 bits (105), Expect = 2e-04 Identities = 24/66 (36%), Positives = 38/66 (57%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL+V L + LR+ F+ FG + A+V+ + G SKGFGFV + + E+A K + Sbjct: 295 NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTE 352 Query: 259 MDGEFL 276 M+G + Sbjct: 353 MNGRIV 358
>PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 52.4 bits (124), Expect = 1e-06 Identities = 27/79 (34%), Positives = 46/79 (58%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+++ + + L++ F KFG +V+TD +G SKGFGFV + EDA K ++ Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDE 250 Query: 259 MDGEFLDGWVIFAEYARPR 315 M+G+ L+G I+ A+ + Sbjct: 251 MNGKELNGKQIYVGRAQKK 269 Score = 47.8 bits (112), Expect = 3e-05 Identities = 25/72 (34%), Positives = 38/72 (52%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+F+ L K L + F+ FG + +V+ D SKG+GFV + T E A + IE Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEK 157 Query: 259 MDGEFLDGWVIF 294 M+G L+ +F Sbjct: 158 MNGMLLNDRKVF 169 Score = 45.1 bits (105), Expect = 2e-04 Identities = 24/66 (36%), Positives = 38/66 (57%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL+V L + LR+ F+ FG + A+V+ + G SKGFGFV + + E+A K + Sbjct: 295 NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTE 352 Query: 259 MDGEFL 276 M+G + Sbjct: 353 MNGRIV 358
>ROC2_NICPL (P49314) 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31)| Length = 292 Score = 52.4 bits (124), Expect = 1e-06 Identities = 30/82 (36%), Positives = 45/82 (54%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 ++V LS L+E F++ G V A+V+ DR +G S+GFGFV Y + ++ I+ + Sbjct: 210 VYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSL 269 Query: 262 DGEFLDGWVIFAEYARPRPPPQ 327 +G LDG I A RP Q Sbjct: 270 NGIDLDGRSIRVSAAEERPRRQ 291 Score = 42.7 bits (99), Expect = 9e-04 Identities = 25/70 (35%), Positives = 35/70 (50%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV L + L F + G VE VI D+++G S+GFGFV T E+ + Sbjct: 90 LFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQF 149 Query: 262 DGEFLDGWVI 291 +G +DG I Sbjct: 150 NGYEIDGRAI 159
>PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-binding protein| 3) (PABP 3) (Testis-specific poly(A)-binding protein) Length = 631 Score = 52.4 bits (124), Expect = 1e-06 Identities = 27/79 (34%), Positives = 46/79 (58%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+++ + + L++ F KFG +V+TD +G SKGFGFV + EDA K ++ Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDE 250 Query: 259 MDGEFLDGWVIFAEYARPR 315 M+G+ L+G I+ A+ + Sbjct: 251 MNGKELNGKQIYVGRAQKK 269 Score = 47.0 bits (110), Expect = 5e-05 Identities = 25/66 (37%), Positives = 39/66 (59%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL+V L + LR+AF+ FG + A+V+ + G SKGFGFV + + E+A K + Sbjct: 295 NLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTE 352 Query: 259 MDGEFL 276 M+G + Sbjct: 353 MNGRIV 358 Score = 46.2 bits (108), Expect = 8e-05 Identities = 26/79 (32%), Positives = 39/79 (49%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+FV L K L + + FG + V+ D SKG+GFV + T E A + I+ Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDE--NGSKGYGFVHFETHEAAERAIKK 157 Query: 259 MDGEFLDGWVIFAEYARPR 315 M+G L+G +F + R Sbjct: 158 MNGMLLNGRKVFVGQFKSR 176
>TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (RA301) Length = 288 Score = 52.0 bits (123), Expect = 1e-06 Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 3/83 (3%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L V GLS TT LRE F+K+G + ++ D+ + S+GF FV + V+DA + E Sbjct: 120 LGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERA 179 Query: 262 DGEFLDGWVIFAEYA---RPRPP 321 +G LDG I +++ RP P Sbjct: 180 NGMELDGRRIRVDFSITKRPHTP 202
>TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (Silica-induced gene 41 protein) (SIG-41) Length = 288 Score = 52.0 bits (123), Expect = 1e-06 Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 3/83 (3%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L V GLS TT LRE F+K+G + ++ D+ + S+GF FV + V+DA + E Sbjct: 120 LGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERA 179 Query: 262 DGEFLDGWVIFAEYA---RPRPP 321 +G LDG I +++ RP P Sbjct: 180 NGMELDGRRIRVDFSITKRPHTP 202
>TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) Length = 288 Score = 52.0 bits (123), Expect = 1e-06 Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 3/83 (3%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L V GLS TT LRE F+K+G + ++ D+ + S+GF FV + V+DA + E Sbjct: 120 LGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERA 179 Query: 262 DGEFLDGWVIFAEYA---RPRPP 321 +G LDG I +++ RP P Sbjct: 180 NGMELDGRRIRVDFSITKRPHTP 202
>ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B)| Length = 291 Score = 52.0 bits (123), Expect = 1e-06 Identities = 30/82 (36%), Positives = 45/82 (54%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 ++V LS L+E F++ G V A+V+ DR +G S+GFGFV Y + ++ I+ + Sbjct: 209 VYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSL 268 Query: 262 DGEFLDGWVIFAEYARPRPPPQ 327 +G LDG I A RP Q Sbjct: 269 NGVDLDGRSIRVSAAEERPRRQ 290 Score = 44.7 bits (104), Expect = 2e-04 Identities = 26/70 (37%), Positives = 35/70 (50%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV L + L F + G VE VI D++TG S+GFGFV T E+ + Sbjct: 89 LFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQF 148 Query: 262 DGEFLDGWVI 291 +G +DG I Sbjct: 149 NGYEIDGRAI 158
>GAR2_SCHPO (P41891) Protein gar2| Length = 500 Score = 51.6 bits (122), Expect = 2e-06 Identities = 28/78 (35%), Positives = 44/78 (56%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +FV LS T D L AF G+++ R+ TD +G KGFG+V + ++ A K +E M Sbjct: 368 VFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKKCVE-M 426 Query: 262 DGEFLDGWVIFAEYARPR 315 +G F+ G +++ PR Sbjct: 427 NGHFIAGRPCRLDFSTPR 444 Score = 48.1 bits (113), Expect = 2e-05 Identities = 26/79 (32%), Positives = 42/79 (53%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +FV LS L + F ++G + ARVI D +G SKG+G+V + T E A + Sbjct: 265 VFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKAAVAAN 324 Query: 262 DGEFLDGWVIFAEYARPRP 318 + +DG ++ + + PRP Sbjct: 325 GTKEIDGRMVNLDLSNPRP 343
>IF34_SCHPO (P78795) Probable eukaryotic translation initiation factor 3| RNA-binding subunit (eIF-3 RNA-binding subunit) (eIF3 p33) (Translation initiation factor eIF3, p33 subunit) Length = 282 Score = 51.2 bits (121), Expect = 2e-06 Identities = 26/78 (33%), Positives = 44/78 (56%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L V+ LS T + LR+ F +FG ++ + D+ TG +KGF FV Y + A K + + Sbjct: 204 LRVTNLSDDTREEELRDLFRRFGGIQRVYLAKDKETGRAKGFAFVSYYDRDCAIKARDRL 263 Query: 262 DGEFLDGWVIFAEYARPR 315 DG + ++ E+++PR Sbjct: 264 DGYGWNNLILRCEFSKPR 281
>RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ssDNA binding| protein SEB4) Length = 237 Score = 51.2 bits (121), Expect = 2e-06 Identities = 25/45 (55%), Positives = 31/45 (68%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFV 216 +FV GL TT LR+ F FG++E A VITDR TG S+G+GFV Sbjct: 34 IFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFV 78
>SAFB1_HUMAN (Q15424) Scaffold attachment factor B (Scaffold attachment factor| B1) (SAF-B) (HSP27 estrogen response element-TATA box-binding protein) (HSP27 ERE-TATA-binding protein) Length = 915 Score = 51.2 bits (121), Expect = 2e-06 Identities = 29/80 (36%), Positives = 45/80 (56%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N +VSGLS T L+ F+K+G+V A+V+T+ + ++ +GFV T E+A K I Sbjct: 407 NFWVSGLSSTTRATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTAEEATKCINH 466 Query: 259 MDGEFLDGWVIFAEYARPRP 318 + L G +I E A+ P Sbjct: 467 LHKTELHGKMISVEKAKNEP 486
>RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HSRNASEB) (ssDNA| binding protein SEB4) (CLL-associated antigen KW-5) Length = 216 Score = 51.2 bits (121), Expect = 2e-06 Identities = 25/45 (55%), Positives = 31/45 (68%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFV 216 +FV GL TT LR+ F FG++E A VITDR TG S+G+GFV Sbjct: 13 IFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFV 57
>RBM8A_DROME (Q9V535) RNA-binding protein 8A (Protein tsunagi)| Length = 165 Score = 51.2 bits (121), Expect = 2e-06 Identities = 25/83 (30%), Positives = 45/83 (54%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV+ + + D ++E F +GE+++ + DR TGFSKG+ V Y T + A E + Sbjct: 75 LFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEAL 134 Query: 262 DGEFLDGWVIFAEYARPRPPPQM 330 +G + G I ++ + P ++ Sbjct: 135 NGAEIMGQTIQVDWCFVKGPKRV 157
>ROA1_RAT (P04256) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (HDP) Length = 319 Score = 50.8 bits (120), Expect = 3e-06 Identities = 32/86 (37%), Positives = 45/86 (52%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ GLS TT + LR F ++G + V+ D T S+GFGFV Y TVE+ + Sbjct: 15 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNAR 74 Query: 262 DGEFLDGWVIFAEYARPRPPPQMGGA 339 + +DG V+ + A R Q GA Sbjct: 75 PHK-VDGRVVEPKRAVSREDSQRPGA 99 Score = 41.2 bits (95), Expect = 0.003 Identities = 17/47 (36%), Positives = 30/47 (63%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRY 222 +FV G+ + T LR+ F ++G++E ++TDR +G +GF FV + Sbjct: 106 IFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTF 152
>ROA1_MOUSE (P49312) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) (HDP-1) (Topoisomerase-inhibitor suppressed) Length = 319 Score = 50.8 bits (120), Expect = 3e-06 Identities = 32/86 (37%), Positives = 45/86 (52%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ GLS TT + LR F ++G + V+ D T S+GFGFV Y TVE+ + Sbjct: 15 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNAR 74 Query: 262 DGEFLDGWVIFAEYARPRPPPQMGGA 339 + +DG V+ + A R Q GA Sbjct: 75 PHK-VDGRVVEPKRAVSREDSQRPGA 99 Score = 41.2 bits (95), Expect = 0.003 Identities = 17/47 (36%), Positives = 30/47 (63%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRY 222 +FV G+ + T LR+ F ++G++E ++TDR +G +GF FV + Sbjct: 106 IFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTF 152
>ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor| Length = 315 Score = 50.8 bits (120), Expect = 3e-06 Identities = 26/64 (40%), Positives = 37/64 (57%) Frame = +1 Query: 124 LREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGMDGEFLDGWVIFAEY 303 L + F++ G+V ARV+ DR TG S+GFGFV + + + I +DG+ LDG I Sbjct: 246 LEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLDGRTIRVNV 305 Query: 304 ARPR 315 A R Sbjct: 306 AEDR 309 Score = 50.8 bits (120), Expect = 3e-06 Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 5/87 (5%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV L ++GL F + G VE A VI +R T S+GFGFV TVE+A K +E Sbjct: 138 LFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEMY 197 Query: 262 DGEFLDGWVIFAEYA-----RPRPPPQ 327 + ++G ++ A RP PP+ Sbjct: 198 NRYDVNGRLLTVNKAARRGERPERPPR 224
>BOLL_MOUSE (Q924M5) Protein boule-like| Length = 281 Score = 50.8 bits (120), Expect = 3e-06 Identities = 22/55 (40%), Positives = 37/55 (67%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAK 246 +FV G+ +T + LR+ F+++G V+ +++ DR G SKG+GF+ + T EDA K Sbjct: 35 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRA-GVSKGYGFITFETQEDAQK 88
>ROA1_BOVIN (P09867) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (Unwinding protein 1) (UP1) (Fragment) Length = 195 Score = 50.8 bits (120), Expect = 3e-06 Identities = 32/86 (37%), Positives = 45/86 (52%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ GLS TT + LR F ++G + V+ D T S+GFGFV Y TVE+ + Sbjct: 15 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNAR 74 Query: 262 DGEFLDGWVIFAEYARPRPPPQMGGA 339 + +DG V+ + A R Q GA Sbjct: 75 PHK-VDGRVVEPKRAVSREDSQRPGA 99 Score = 41.2 bits (95), Expect = 0.003 Identities = 17/47 (36%), Positives = 30/47 (63%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRY 222 +FV G+ + T LR+ F ++G++E ++TDR +G +GF FV + Sbjct: 106 IFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTF 152
>PUB1_YEAST (P32588) Nuclear and cytoplasmic polyadenylated RNA-binding protein| PUB1 (ARS consensus-binding protein ACBP-60) (Poly(U)-binding protein) (Poly uridylate-binding protein) Length = 452 Score = 50.8 bits (120), Expect = 3e-06 Identities = 27/79 (34%), Positives = 41/79 (51%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NLFV L+ + LR AF F V+ D TG S+G+GFV + + +DA ++ Sbjct: 162 NLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDS 221 Query: 259 MDGEFLDGWVIFAEYARPR 315 M G+ L+G + +A R Sbjct: 222 MQGQDLNGRPLRINWAAKR 240
>SAFB2_HUMAN (Q14151) Scaffold attachment factor B2| Length = 953 Score = 50.8 bits (120), Expect = 3e-06 Identities = 29/80 (36%), Positives = 46/80 (57%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL+VSGLS T L+ F+K+G+V A+V+T+ + ++ +GFV T ++A K I Sbjct: 408 NLWVSGLSSTTRATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSDEATKCISH 467 Query: 259 MDGEFLDGWVIFAEYARPRP 318 + L G +I E A+ P Sbjct: 468 LHRTELHGRMISVEKAKNEP 487
>ROA1_HUMAN (P09651) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) Length = 371 Score = 50.8 bits (120), Expect = 3e-06 Identities = 32/86 (37%), Positives = 45/86 (52%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ GLS TT + LR F ++G + V+ D T S+GFGFV Y TVE+ + Sbjct: 15 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNAR 74 Query: 262 DGEFLDGWVIFAEYARPRPPPQMGGA 339 + +DG V+ + A R Q GA Sbjct: 75 PHK-VDGRVVEPKRAVSREDSQRPGA 99 Score = 41.2 bits (95), Expect = 0.003 Identities = 17/47 (36%), Positives = 30/47 (63%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRY 222 +FV G+ + T LR+ F ++G++E ++TDR +G +GF FV + Sbjct: 106 IFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTF 152
>RBY1A_HUMAN (Q15414) RNA-binding motif protein, Y chromosome, family 1 member| A1 (RNA-binding motif protein 1) Length = 496 Score = 50.8 bits (120), Expect = 3e-06 Identities = 30/85 (35%), Positives = 44/85 (51%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ GL++ T L+ F K G + +I DR T S+GF F+ + DA + M Sbjct: 10 LFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADAKNAAKDM 68 Query: 262 DGEFLDGWVIFAEYARPRPPPQMGG 336 +G+ L G I E A+ +P Q GG Sbjct: 69 NGKSLHGKAIKVEQAK-KPSFQSGG 92
>BOLL_MACFA (Q8WP23) Protein boule-like| Length = 283 Score = 50.8 bits (120), Expect = 3e-06 Identities = 23/55 (41%), Positives = 36/55 (65%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAK 246 +FV G+ +T LR+ F+++G V+ +++ DR G SKG+GFV + T EDA K Sbjct: 35 IFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRA-GVSKGYGFVTFETQEDAQK 88
>BOLL_HUMAN (Q8N9W6) Protein boule-like| Length = 283 Score = 50.8 bits (120), Expect = 3e-06 Identities = 23/55 (41%), Positives = 36/55 (65%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAK 246 +FV G+ +T LR+ F+++G V+ +++ DR G SKG+GFV + T EDA K Sbjct: 35 IFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRA-GVSKGYGFVTFETQEDAQK 88
>RU17_ARATH (Q42404) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 427 Score = 50.4 bits (119), Expect = 4e-06 Identities = 22/81 (27%), Positives = 42/81 (51%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFVS L+ ++ ++ F +G ++ ++TD++T KG+ F+ Y+ D + Sbjct: 140 LFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQA 199 Query: 262 DGEFLDGWVIFAEYARPRPPP 324 DG+ +DG + + R R P Sbjct: 200 DGQKIDGRRVLVDVERGRTVP 220
>SQD_DROME (Q08473) RNA-binding protein squid (Heterogeneous nuclear| ribonucleoprotein 40) (HNRNP 40) Length = 344 Score = 50.4 bits (119), Expect = 4e-06 Identities = 25/51 (49%), Positives = 31/51 (60%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVE 234 LFV GLS TT LR+ F K+GE+E V TD TG S+GF F+ + E Sbjct: 58 LFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTE 108 Score = 33.1 bits (74), Expect = 0.70 Identities = 20/85 (23%), Positives = 39/85 (45%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +FV GL+ + + ++ F +FG + + D+ KGF F+ + + E + Sbjct: 138 IFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDS-EQVVTDLLKT 196 Query: 262 DGEFLDGWVIFAEYARPRPPPQMGG 336 + + G + + A P+P QM G Sbjct: 197 PKQKIAGKEVDVKRATPKPENQMMG 221
>SAFB1_RAT (O88453) Scaffold attachment factor B (Scaffold attachment factor| B1) (SAF-B) Length = 931 Score = 50.4 bits (119), Expect = 4e-06 Identities = 28/80 (35%), Positives = 45/80 (56%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N +VSGLS T L+ F+++G+V A+V+T+ + ++ +GFV T E+A K I Sbjct: 429 NFWVSGLSSTTRATDLKNLFSRYGKVVGAKVVTNARSPGARCYGFVTMSTAEEATKCINH 488 Query: 259 MDGEFLDGWVIFAEYARPRP 318 + L G +I E A+ P Sbjct: 489 LHKTELHGKMISVEKAKSEP 508
>TADBP_HUMAN (Q13148) TAR DNA-binding protein 43 (TDP-43)| Length = 414 Score = 50.4 bits (119), Expect = 4e-06 Identities = 30/70 (42%), Positives = 39/70 (55%), Gaps = 3/70 (4%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 +L V GL +TT L+E F+ FGEV +V D TG SKGFGFVR+ E K + Sbjct: 105 DLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ 164 Query: 259 ---MDGEFLD 279 +DG + D Sbjct: 165 RHMIDGRWCD 174
>NGR1_YEAST (P32831) Negative growth regulatory protein NGR1 (RNA-binding| protein RBP1) Length = 672 Score = 50.1 bits (118), Expect = 6e-06 Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 1/80 (1%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAF-AKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIE 255 +LFV LS T L F +F V+ RV+TD +TG S+ FGFVR+ ++ + + Sbjct: 193 SLFVGDLSPTATEADLLSLFQTRFKSVKTVRVMTDPLTGSSRCFGFVRFGDEDERRRALI 252 Query: 256 GMDGEFLDGWVIFAEYARPR 315 M G++ G + YA PR Sbjct: 253 EMSGKWFQGRALRVAYATPR 272 Score = 39.7 bits (91), Expect = 0.007 Identities = 25/77 (32%), Positives = 36/77 (46%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +FV GL +TT LR F FG + + R+ K GFV++ DA I+G+ Sbjct: 362 VFVGGLVPKTTEFQLRSLFKPFGPILNVRIPN------GKNCGFVKFEKRIDAEASIQGL 415 Query: 262 DGEFLDGWVIFAEYARP 312 G + G I + RP Sbjct: 416 QGFIVGGSPIRLSWGRP 432
>RO32_XENLA (P51992) Heterogeneous nuclear ribonucleoprotein A3 homolog 2| (hnRNP A3(B)) Length = 385 Score = 50.1 bits (118), Expect = 6e-06 Identities = 32/86 (37%), Positives = 45/86 (52%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ GLS TT D LRE F ++G++ V+ D T S+GFGFV Y VE+ + Sbjct: 29 LFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSAR 88 Query: 262 DGEFLDGWVIFAEYARPRPPPQMGGA 339 + +DG V+ + A R GA Sbjct: 89 PHK-VDGRVVEPKRAVSREDSARPGA 113 Score = 38.1 bits (87), Expect = 0.022 Identities = 17/47 (36%), Positives = 28/47 (59%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRY 222 +FV G+ + T LR+ F +G++E V+ DR +G +GF FV + Sbjct: 120 IFVGGIKEDTEEYHLRDYFEGYGKIETIEVMEDRQSGKKRGFAFVTF 166
>PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-binding protein| 1-A) (Cytoplasmic poly(A)-binding protein 1-A) (PABP-A) (PABP 1-A) (xPABP1-A) Length = 633 Score = 50.1 bits (118), Expect = 6e-06 Identities = 26/79 (32%), Positives = 44/79 (55%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+++ + L+E F K+G +V+TD G SKGFGFV + EDA K ++ Sbjct: 192 NVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDD-NGKSKGFGFVSFERHEDAQKAVDE 250 Query: 259 MDGEFLDGWVIFAEYARPR 315 M+G+ ++G +F A+ + Sbjct: 251 MNGKDMNGKSMFVGRAQKK 269 Score = 46.6 bits (109), Expect = 6e-05 Identities = 24/72 (33%), Positives = 38/72 (52%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+F+ L K L + F+ FG + +V+ D SKG+GFV + T E A + I+ Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIDK 157 Query: 259 MDGEFLDGWVIF 294 M+G L+ +F Sbjct: 158 MNGMLLNDRKVF 169 Score = 44.3 bits (103), Expect = 3e-04 Identities = 24/66 (36%), Positives = 37/66 (56%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL+V L + LR+ F FG + A+V+ + G SKGFGFV + + E+A K + Sbjct: 295 NLYVKNLDDGIDDERLRKEFLPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTE 352 Query: 259 MDGEFL 276 M+G + Sbjct: 353 MNGRIV 358
>EPAB_XENTR (Q6DEY7) Embryonic polyadenylate-binding protein (Embryonic poly(A)| binding protein) (ePABP) Length = 629 Score = 50.1 bits (118), Expect = 6e-06 Identities = 27/79 (34%), Positives = 44/79 (55%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+++ + LRE F+ FG +V+ D TG S+GFGFV Y E+A K + Sbjct: 192 NVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDD-TGRSRGFGFVNYGNHEEAQKAVSE 250 Query: 259 MDGEFLDGWVIFAEYARPR 315 M+G+ ++G +I+ A+ R Sbjct: 251 MNGKEVNGRMIYVGRAQKR 269 Score = 48.9 bits (115), Expect = 1e-05 Identities = 26/77 (33%), Positives = 43/77 (55%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL+V L D LR+ F+ +G + A+V+T+ G SKGFGFV + + E+A K + Sbjct: 295 NLYVKNLDDGIDDDRLRKEFSPYGTITSAKVMTEG--GHSKGFGFVCFSSPEEATKAVTE 352 Query: 259 MDGEFLDGWVIFAEYAR 309 M+G + ++ A+ Sbjct: 353 MNGRIVSTKPLYVALAQ 369 Score = 43.9 bits (102), Expect = 4e-04 Identities = 23/79 (29%), Positives = 41/79 (51%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+F+ L + L + F+ FG + +V+ D S+G+GFV + T E A + I+ Sbjct: 100 NVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETQEAANRAIQT 157 Query: 259 MDGEFLDGWVIFAEYARPR 315 M+G L+ +F + + R Sbjct: 158 MNGMLLNDRKVFVGHFKSR 176
>RO31_XENLA (P51968) Heterogeneous nuclear ribonucleoprotein A3 homolog 1| (hnRNP A3(A)) Length = 373 Score = 50.1 bits (118), Expect = 6e-06 Identities = 32/86 (37%), Positives = 45/86 (52%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ GLS TT D LRE F ++G++ V+ D T S+GFGFV Y VE+ + Sbjct: 29 LFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSAR 88 Query: 262 DGEFLDGWVIFAEYARPRPPPQMGGA 339 + +DG V+ + A R GA Sbjct: 89 PHK-VDGRVVEPKRAVSREDSARPGA 113 Score = 35.8 bits (81), Expect = 0.11 Identities = 16/47 (34%), Positives = 27/47 (57%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRY 222 +FV G+ + T LR+ +G++E V+ DR +G +GF FV + Sbjct: 120 IFVGGIKEDTEEYHLRDYSESYGKIETIEVMEDRQSGKKRGFAFVTF 166
>ROA3_RAT (Q6URK4) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 379 Score = 49.7 bits (117), Expect = 7e-06 Identities = 26/52 (50%), Positives = 32/52 (61%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVED 237 LF+ GLS TT D LRE F K+G + V+ D T S+GFGFV Y VE+ Sbjct: 37 LFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEE 88 Score = 41.6 bits (96), Expect = 0.002 Identities = 18/47 (38%), Positives = 29/47 (61%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRY 222 +FV G+ + T LR+ F K+G++E V+ DR +G +GF FV + Sbjct: 128 IFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTF 174
>ROA3_MOUSE (Q8BG05) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 379 Score = 49.7 bits (117), Expect = 7e-06 Identities = 26/52 (50%), Positives = 32/52 (61%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVED 237 LF+ GLS TT D LRE F K+G + V+ D T S+GFGFV Y VE+ Sbjct: 37 LFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEE 88 Score = 41.6 bits (96), Expect = 0.002 Identities = 18/47 (38%), Positives = 29/47 (61%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRY 222 +FV G+ + T LR+ F K+G++E V+ DR +G +GF FV + Sbjct: 128 IFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTF 174
>ROA3_HUMAN (P51991) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 378 Score = 49.7 bits (117), Expect = 7e-06 Identities = 26/52 (50%), Positives = 32/52 (61%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVED 237 LF+ GLS TT D LRE F K+G + V+ D T S+GFGFV Y VE+ Sbjct: 37 LFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEE 88 Score = 41.6 bits (96), Expect = 0.002 Identities = 18/47 (38%), Positives = 29/47 (61%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRY 222 +FV G+ + T LR+ F K+G++E V+ DR +G +GF FV + Sbjct: 128 IFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTF 174
>ROA1_MACMU (Q28521) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) Length = 319 Score = 49.7 bits (117), Expect = 7e-06 Identities = 32/86 (37%), Positives = 44/86 (51%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ GLS TT + LR F ++G + V+ D T S+GFGFV Y TVE + Sbjct: 15 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEKVDAAMNAR 74 Query: 262 DGEFLDGWVIFAEYARPRPPPQMGGA 339 + +DG V+ + A R Q GA Sbjct: 75 PHK-VDGRVVEPKRAVSREDSQRPGA 99 Score = 41.2 bits (95), Expect = 0.003 Identities = 17/47 (36%), Positives = 30/47 (63%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRY 222 +FV G+ + T LR+ F ++G++E ++TDR +G +GF FV + Sbjct: 106 IFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTF 152
>PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-binding protein| 3) (PABP 3) Length = 660 Score = 49.7 bits (117), Expect = 7e-06 Identities = 29/79 (36%), Positives = 44/79 (55%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N++V L K D LR+ F KFG + A V+ D+ +G S+ FGFV + E AA +E Sbjct: 230 NVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQ-SGNSRCFGFVNFECTEAAASAVEK 288 Query: 259 MDGEFLDGWVIFAEYARPR 315 M+G L V++ A+ + Sbjct: 289 MNGISLGDDVLYVGRAQKK 307 Score = 45.4 bits (106), Expect = 1e-04 Identities = 24/72 (33%), Positives = 38/72 (52%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+F+ L L E F+ FG + +V D VTG SKG+GFV++ E A I+ Sbjct: 137 NIFIKNLDASIDNKALFETFSSFGTILSCKVAMD-VTGRSKGYGFVQFEKEESAQAAIDK 195 Query: 259 MDGEFLDGWVIF 294 ++G ++ +F Sbjct: 196 LNGMLMNDKQVF 207 Score = 45.1 bits (105), Expect = 2e-04 Identities = 21/66 (31%), Positives = 39/66 (59%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL++ L + L+E F+++G V ++V+ + G S+GFGFV Y E+A + + Sbjct: 333 NLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNP-QGMSRGFGFVAYSNPEEALRALSE 391 Query: 259 MDGEFL 276 M+G+ + Sbjct: 392 MNGKMI 397
>PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-binding protein| 1-B) (Cytoplasmic poly(A)-binding protein 1-B) (PABP-B) (PABP 1-B) (xPABP1-B) Length = 633 Score = 49.3 bits (116), Expect = 9e-06 Identities = 26/79 (32%), Positives = 45/79 (56%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+++ + + L+E F ++G +V+TD G S+GFGFV + EDA K ++ Sbjct: 192 NVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDD-HGKSRGFGFVSFERHEDAQKAVDD 250 Query: 259 MDGEFLDGWVIFAEYARPR 315 M+G+ L+G IF A+ + Sbjct: 251 MNGKDLNGKAIFVGRAQKK 269 Score = 46.6 bits (109), Expect = 6e-05 Identities = 24/72 (33%), Positives = 38/72 (52%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+F+ L K L + F+ FG + +V+ D SKG+GFV + T E A + I+ Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIDK 157 Query: 259 MDGEFLDGWVIF 294 M+G L+ +F Sbjct: 158 MNGMLLNDRKVF 169 Score = 45.1 bits (105), Expect = 2e-04 Identities = 24/66 (36%), Positives = 37/66 (56%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL+V L + LR+ F FG + A+V+ + G SKGFGFV + + E+A K + Sbjct: 295 NLYVKNLDDGIDDERLRKEFTPFGSITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTE 352 Query: 259 MDGEFL 276 M+G + Sbjct: 353 MNGRIV 358
>FCA_ARATH (O04425) Flowering time control protein FCA| Length = 747 Score = 49.3 bits (116), Expect = 9e-06 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 6/85 (7%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV L+K+ T + E F +FG VE ++ D S+G GFV+Y + E A I+G+ Sbjct: 213 LFVGSLNKQATEKEVEEIFLQFGHVEDVYLMRDEYRQ-SRGCGFVKYSSKETAMAAIDGL 271 Query: 262 DGEF-LDGW-----VIFAEYARPRP 318 +G + + G V FAE RP+P Sbjct: 272 NGTYTMRGCNQPLIVRFAEPKRPKP 296 Score = 40.4 bits (93), Expect = 0.004 Identities = 20/63 (31%), Positives = 33/63 (52%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV + + T + +R F + G V +I D+ TG +G FV+Y T +DA + I + Sbjct: 122 LFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIRAL 181 Query: 262 DGE 270 + Sbjct: 182 HNQ 184
>IF34_CAEEL (Q19706) Probable eukaryotic translation initiation factor 3| subunit 4 (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3g) Length = 256 Score = 49.3 bits (116), Expect = 9e-06 Identities = 26/75 (34%), Positives = 40/75 (53%) Frame = +1 Query: 88 VSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGMDG 267 V+ L + D LR+ F K G V + D+VTG KGF FV + + +DAA+ I ++ Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELND 239 Query: 268 EFLDGWVIFAEYARP 312 + V+ E+ RP Sbjct: 240 IRMYHMVLKVEWTRP 254
>TADBP_MOUSE (Q921F2) TAR DNA-binding protein 43 (TDP-43)| Length = 414 Score = 49.3 bits (116), Expect = 9e-06 Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 +L V GL +TT L++ F+ FGEV +V D TG SKGFGFVR+ E K + Sbjct: 105 DLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ 164 Query: 259 ---MDGEFLD 279 +DG + D Sbjct: 165 RHMIDGRWCD 174
>RBPA_SYNY3 (Q57014) Putative RNA-binding protein rbpA| Length = 101 Score = 48.9 bits (115), Expect = 1e-05 Identities = 28/87 (32%), Positives = 43/87 (49%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 +++V LS + L FA++G V+ ++ TDR TG +GFGFV + IE Sbjct: 2 SIYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAIEA 61 Query: 259 MDGEFLDGWVIFAEYARPRPPPQMGGA 339 +DG G + A+PR GG+ Sbjct: 62 LDGAEWMGRDLKVNKAKPRENRSGGGS 88
>HNRPD_MOUSE (Q60668) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 355 Score = 48.9 bits (115), Expect = 1e-05 Identities = 29/76 (38%), Positives = 45/76 (59%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +F+ GLS TT L++ F+KFGEV + D +TG S+GFGFV + E K ++ Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 158 Query: 262 DGEFLDGWVIFAEYAR 309 + + L+G VI + A+ Sbjct: 159 EHK-LNGKVIDPKRAK 173 Score = 40.4 bits (93), Expect = 0.004 Identities = 22/58 (37%), Positives = 30/58 (51%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIE 255 +FV GLS T + +RE F FGEVE + D T +GF F+ + E K +E Sbjct: 184 IFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241
>HNRPD_HUMAN (Q14103) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 355 Score = 48.9 bits (115), Expect = 1e-05 Identities = 29/76 (38%), Positives = 45/76 (59%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +F+ GLS TT L++ F+KFGEV + D +TG S+GFGFV + E K ++ Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 158 Query: 262 DGEFLDGWVIFAEYAR 309 + + L+G VI + A+ Sbjct: 159 EHK-LNGKVIDPKRAK 173 Score = 40.4 bits (93), Expect = 0.004 Identities = 22/58 (37%), Positives = 30/58 (51%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIE 255 +FV GLS T + +RE F FGEVE + D T +GF F+ + E K +E Sbjct: 184 IFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241
>SAFB2_MOUSE (Q80YR5) Scaffold attachment factor B2| Length = 991 Score = 48.5 bits (114), Expect = 2e-05 Identities = 29/80 (36%), Positives = 45/80 (56%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL+VSGLS T L+ F+K G+V A+V+T+ + ++ +GFV T ++A K I Sbjct: 452 NLWVSGLSSSTRAADLKSLFSKHGKVIGAKVVTNARSPGARCYGFVTMSTSDEATKCISH 511 Query: 259 MDGEFLDGWVIFAEYARPRP 318 + L G +I E A+ P Sbjct: 512 LHRTELHGRMISVEKAKNEP 531
>RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Coactivator of| activating protein 1 and estrogen receptors) (Coactivator of AP-1 and ERs) (Transcription coactivator CAPER) Length = 530 Score = 48.5 bits (114), Expect = 2e-05 Identities = 26/67 (38%), Positives = 37/67 (55%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L+V L T D LR F FG +E +++ D TG SKG+GF+ + E A K +E + Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311 Query: 262 DGEFLDG 282 +G L G Sbjct: 312 NGFELAG 318 Score = 34.3 bits (77), Expect = 0.31 Identities = 22/73 (30%), Positives = 36/73 (49%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +F L+ R L E F+ G+V R+I+DR + S+G +V +V V I G+ Sbjct: 155 VFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSRGIAYVEFVDVSSVRLAI-GL 213 Query: 262 DGEFLDGWVIFAE 300 G+ + G I + Sbjct: 214 TGQRVLGVPIIVQ 226
>RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (Hepatocellular| carcinoma protein 1) (Splicing factor HCC1) Length = 530 Score = 48.5 bits (114), Expect = 2e-05 Identities = 26/67 (38%), Positives = 37/67 (55%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L+V L T D LR F FG +E +++ D TG SKG+GF+ + E A K +E + Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311 Query: 262 DGEFLDG 282 +G L G Sbjct: 312 NGFELAG 318 Score = 35.4 bits (80), Expect = 0.14 Identities = 23/73 (31%), Positives = 36/73 (49%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +F L+ R L E F+ G+V R+I+DR + SKG +V +V V I G+ Sbjct: 155 VFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI-GL 213 Query: 262 DGEFLDGWVIFAE 300 G+ + G I + Sbjct: 214 TGQRVLGVPIIVQ 226
>EPABA_XENLA (Q98SP8) Embryonic polyadenylate-binding protein-A (Embryonic| poly(A) binding protein-A) (ePABP-A) (ePAB-A) (XePABP-A) Length = 629 Score = 48.5 bits (114), Expect = 2e-05 Identities = 26/79 (32%), Positives = 44/79 (55%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+++ + LRE F+ FG +V+ D +G S+GFGFV Y E+A K + Sbjct: 192 NVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDD-SGRSRGFGFVNYGNHEEAQKAVSE 250 Query: 259 MDGEFLDGWVIFAEYARPR 315 M+G+ ++G +I+ A+ R Sbjct: 251 MNGKEVNGRMIYVGRAQKR 269 Score = 48.1 bits (113), Expect = 2e-05 Identities = 26/77 (33%), Positives = 42/77 (54%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL+V L D LR+ F +G + A+V+T+ G SKGFGFV + + E+A K + Sbjct: 295 NLYVKNLDDGIDDDRLRKEFLPYGTITSAKVMTEG--GHSKGFGFVCFSSPEEATKAVTE 352 Query: 259 MDGEFLDGWVIFAEYAR 309 M+G + ++ A+ Sbjct: 353 MNGRIVSTKPLYVALAQ 369 Score = 43.5 bits (101), Expect = 5e-04 Identities = 23/79 (29%), Positives = 41/79 (51%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+F+ L + L + F+ FG + +V+ D S+G+GFV + T E A + I+ Sbjct: 100 NVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETHEAANRAIQT 157 Query: 259 MDGEFLDGWVIFAEYARPR 315 M+G L+ +F + + R Sbjct: 158 MNGMLLNDRKVFVGHFKSR 176
>DAZL_MACFA (Q95192) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) Length = 295 Score = 48.5 bits (114), Expect = 2e-05 Identities = 24/58 (41%), Positives = 35/58 (60%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIE 255 +FV G+ R +R FA++G V+ ++ITDR TG SKG+GFV + D K +E Sbjct: 42 VFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIVE 98
>DAZL_HUMAN (Q92904) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) (DAZ homolog) (SPGY-like-autosomal) Length = 295 Score = 48.5 bits (114), Expect = 2e-05 Identities = 24/58 (41%), Positives = 35/58 (60%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIE 255 +FV G+ R +R FA++G V+ ++ITDR TG SKG+GFV + D K +E Sbjct: 42 VFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIVE 98
>DAZL_MOUSE (Q64368) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) Length = 298 Score = 48.5 bits (114), Expect = 2e-05 Identities = 24/58 (41%), Positives = 35/58 (60%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIE 255 +FV G+ R +R FA++G V+ ++ITDR TG SKG+GFV + D K +E Sbjct: 42 VFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFYNDVDVQKIVE 98
>ELAV_DROME (P16914) Protein elav (Embryonic lethal abnormal visual protein)| Length = 483 Score = 48.1 bits (113), Expect = 2e-05 Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 13/91 (14%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVT-------------GFSKGFGFVR 219 NL V+ L + T D +R F+ GE+E ++I D+ G S G+GFV Sbjct: 150 NLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVN 209 Query: 220 YVTVEDAAKGIEGMDGEFLDGWVIFAEYARP 312 YV +DA + + ++G L I +ARP Sbjct: 210 YVRPQDAEQAVNVLNGLRLQNKTIKVSFARP 240 Score = 43.1 bits (100), Expect = 7e-04 Identities = 19/62 (30%), Positives = 32/62 (51%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +F+ L+ T L + F FG V+ +++ D T KG+GFV ++AA I + Sbjct: 404 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 463 Query: 262 DG 267 +G Sbjct: 464 NG 465 Score = 42.0 bits (97), Expect = 0.001 Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGF-SKGFGFVRYVTVEDAAKGIE 255 NL+VSGL K T L FA FG + +R++ + +KG GF+R+ E+A + I Sbjct: 249 NLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAII 308 Query: 256 GMDG 267 ++G Sbjct: 309 ALNG 312
>ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor| Length = 324 Score = 48.1 bits (113), Expect = 2e-05 Identities = 28/80 (35%), Positives = 44/80 (55%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L+V+ LS T+ GLR+AFA A+VI DR +G S+GFGF+ + + E ++ M Sbjct: 219 LYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTM 278 Query: 262 DGEFLDGWVIFAEYARPRPP 321 + L+G + A + P Sbjct: 279 NEVELEGRPLRLNVAGQKAP 298 Score = 47.8 bits (112), Expect = 3e-05 Identities = 26/67 (38%), Positives = 37/67 (55%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L+V L T+ L E FA+ G V + ++ DRVT S+GF FV +VE+A + I Sbjct: 116 LYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLF 175 Query: 262 DGEFLDG 282 DG + G Sbjct: 176 DGSQVGG 182
>ELAV_DROVI (P23241) Protein elav (Embryonic lethal abnormal visual protein)| Length = 519 Score = 48.1 bits (113), Expect = 2e-05 Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 13/91 (14%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVT-------------GFSKGFGFVR 219 NL V+ L + T D +R F+ GE+E ++I D+ G S G+GFV Sbjct: 186 NLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVN 245 Query: 220 YVTVEDAAKGIEGMDGEFLDGWVIFAEYARP 312 YV +DA + + ++G L I +ARP Sbjct: 246 YVRPQDAEQAVNVLNGLRLQNKTIKVSFARP 276 Score = 43.1 bits (100), Expect = 7e-04 Identities = 19/62 (30%), Positives = 32/62 (51%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +F+ L+ T L + F FG V+ +++ D T KG+GFV ++AA I + Sbjct: 440 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 499 Query: 262 DG 267 +G Sbjct: 500 NG 501 Score = 42.0 bits (97), Expect = 0.001 Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGF-SKGFGFVRYVTVEDAAKGIE 255 NL+VSGL K T L FA FG + +R++ + +KG GF+R+ E+A + I Sbjct: 285 NLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAII 344 Query: 256 GMDG 267 ++G Sbjct: 345 ALNG 348
>SXL_CHRRU (O97018) Sex-lethal homolog| Length = 307 Score = 47.8 bits (112), Expect = 3e-05 Identities = 21/68 (30%), Positives = 38/68 (55%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL+V+ L + T D L + F K+G + ++ D++TG +G FVR+ E+A + I Sbjct: 172 NLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISA 231 Query: 259 MDGEFLDG 282 ++ +G Sbjct: 232 LNNVIPEG 239 Score = 41.6 bits (96), Expect = 0.002 Identities = 24/78 (30%), Positives = 38/78 (48%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL V+ L + T L F G + R++ D TG+S G+ FV + + DA I+ Sbjct: 86 NLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKS 145 Query: 259 MDGEFLDGWVIFAEYARP 312 ++G + + YARP Sbjct: 146 LNGVTVRNKRLKVSYARP 163
>HNRPD_RAT (Q9JJ54) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 353 Score = 47.8 bits (112), Expect = 3e-05 Identities = 28/76 (36%), Positives = 45/76 (59%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +F+ GLS TT L++ F+KFG+V + D +TG S+GFGFV + E K ++ Sbjct: 97 MFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 156 Query: 262 DGEFLDGWVIFAEYAR 309 + + L+G VI + A+ Sbjct: 157 EHK-LNGKVIDPKRAK 171 Score = 40.4 bits (93), Expect = 0.004 Identities = 22/58 (37%), Positives = 30/58 (51%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIE 255 +FV GLS T + +RE F FGEVE + D T +GF F+ + E K +E Sbjct: 182 IFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 239
>SXL_MUSDO (O17310) Sex-lethal homolog| Length = 324 Score = 47.8 bits (112), Expect = 3e-05 Identities = 21/68 (30%), Positives = 38/68 (55%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL+V+ L + T D L + F K+G + ++ D++TG +G FVR+ E+A + I Sbjct: 189 NLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAISA 248 Query: 259 MDGEFLDG 282 ++ +G Sbjct: 249 LNNVIPEG 256 Score = 40.0 bits (92), Expect = 0.006 Identities = 24/78 (30%), Positives = 38/78 (48%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL V+ L + T L F G + R++ D TG+S G+ FV + + DA I+ Sbjct: 103 NLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKT 162 Query: 259 MDGEFLDGWVIFAEYARP 312 ++G + + YARP Sbjct: 163 VNGITVRNKRLKVSYARP 180
>SXL_DROSU (Q24668) Protein sex-lethal| Length = 354 Score = 47.8 bits (112), Expect = 3e-05 Identities = 22/68 (32%), Positives = 37/68 (54%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL+V+ L + T D L F K+G + ++ D++TG +G FVRY E+A + I Sbjct: 214 NLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISA 273 Query: 259 MDGEFLDG 282 ++ +G Sbjct: 274 LNNVIPEG 281 Score = 40.8 bits (94), Expect = 0.003 Identities = 23/78 (29%), Positives = 39/78 (50%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL V+ L + T L F G + R++ D TG+S G+ FV + + D+ + I+ Sbjct: 128 NLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKV 187 Query: 259 MDGEFLDGWVIFAEYARP 312 ++G + + YARP Sbjct: 188 LNGITVRNKRLKVSYARP 205
>SXL_DROME (P19339) Protein sex-lethal| Length = 354 Score = 47.8 bits (112), Expect = 3e-05 Identities = 22/68 (32%), Positives = 37/68 (54%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL+V+ L + T D L F K+G + ++ D++TG +G FVRY E+A + I Sbjct: 212 NLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISA 271 Query: 259 MDGEFLDG 282 ++ +G Sbjct: 272 LNNVIPEG 279 Score = 40.8 bits (94), Expect = 0.003 Identities = 23/78 (29%), Positives = 39/78 (50%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL V+ L + T L F G + R++ D TG+S G+ FV + + D+ + I+ Sbjct: 126 NLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKV 185 Query: 259 MDGEFLDGWVIFAEYARP 312 ++G + + YARP Sbjct: 186 LNGITVRNKRLKVSYARP 203
>DAZL_CALJA (Q9BGN8) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) Length = 296 Score = 47.8 bits (112), Expect = 3e-05 Identities = 24/58 (41%), Positives = 35/58 (60%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIE 255 +FV G+ R +R FA++G V+ ++ITDR TG SKG+GFV + D K +E Sbjct: 42 VFVGGIDVRMDETEIRGFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIVE 98
>EPABB_XENLA (Q6GR16) Embryonic polyadenylate-binding protein-B (Embryonic| poly(A) binding protein-B) (ePABP-B) (ePAB-B) (XePABP-B) Length = 629 Score = 47.4 bits (111), Expect = 4e-05 Identities = 25/77 (32%), Positives = 42/77 (54%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL+V L D LR+ F+ +G + +V+T+ G SKGFGFV + + E+A K + Sbjct: 295 NLYVKNLDDGIDDDRLRKEFSPYGTITSTKVMTEG--GHSKGFGFVCFSSPEEATKAVTE 352 Query: 259 MDGEFLDGWVIFAEYAR 309 M+G + ++ A+ Sbjct: 353 MNGRIVSTKPLYVALAQ 369 Score = 47.4 bits (111), Expect = 4e-05 Identities = 24/79 (30%), Positives = 44/79 (55%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+++ + L+E F+ FG +V+ D +G S+GFGFV Y E+A K + Sbjct: 192 NVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDN-SGRSRGFGFVNYGNHEEAQKAVTE 250 Query: 259 MDGEFLDGWVIFAEYARPR 315 M+G+ ++G +++ A+ R Sbjct: 251 MNGKEVNGRMVYVGRAQKR 269 Score = 44.7 bits (104), Expect = 2e-04 Identities = 23/79 (29%), Positives = 41/79 (51%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+F+ L L + F+ FG++ +V+ D S+G+GFV + T E A + I+ Sbjct: 100 NVFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYG--SRGYGFVHFETQEAANRAIQT 157 Query: 259 MDGEFLDGWVIFAEYARPR 315 M+G L+ +F + + R Sbjct: 158 MNGMLLNDRKVFVGHFKSR 176
>YG5B_YEAST (P53316) Hypothetical 89.5 kDa protein in MGA1-GCN4 intergenic| region Length = 781 Score = 47.4 bits (111), Expect = 4e-05 Identities = 22/75 (29%), Positives = 41/75 (54%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+FV G++K + L F+K+G + ++I D+ G G+GF+ Y A+ I+ Sbjct: 196 NIFVGGIAKSLSIGELSFLFSKYGPILSMKLIYDKTKGEPNGYGFISYPLGSQASLCIKE 255 Query: 259 MDGEFLDGWVIFAEY 303 ++G ++G +F Y Sbjct: 256 LNGRTVNGSTLFINY 270 Score = 37.4 bits (85), Expect = 0.037 Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 19/82 (23%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVIT-------------------DRVTGFSK 201 NL+V + T + L + + FGE+ +VIT D G S+ Sbjct: 541 NLYVKHIPLSWTDEDLYDFYKSFGEIISVKVITVGGSKNKYRQQSNDSSSDNDLPVGSSR 600 Query: 202 GFGFVRYVTVEDAAKGIEGMDG 267 G+GFV + + DAAK I DG Sbjct: 601 GYGFVSFESPLDAAKAILNTDG 622
>RO22_XENLA (P51990) Heterogeneous nuclear ribonucleoprotein A2 homolog 2| (hnRNP A2(B)) Length = 358 Score = 47.0 bits (110), Expect = 5e-05 Identities = 20/47 (42%), Positives = 31/47 (65%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRY 222 LFV G+ + T LRE F ++G++E +ITD+ +G +GFGFV + Sbjct: 102 LFVGGIKEDTEEHHLREYFEEYGKIESTEIITDKQSGKKRGFGFVTF 148 Score = 40.4 bits (93), Expect = 0.004 Identities = 25/86 (29%), Positives = 42/86 (48%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ GLS TT + LR + ++G++ V+ D + S+GFGFV + + + + Sbjct: 11 LFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMSAR 70 Query: 262 DGEFLDGWVIFAEYARPRPPPQMGGA 339 +DG V+ + A R GA Sbjct: 71 P-HTIDGRVVEPKRAVAREESAKPGA 95
>PABP_DROME (P21187) Polyadenylate-binding protein (Poly(A)-binding protein)| (PABP) Length = 634 Score = 47.0 bits (110), Expect = 5e-05 Identities = 25/79 (31%), Positives = 41/79 (51%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N+F+ L + + + F+ FG + +V TD G SKG+GFV + T E A I+ Sbjct: 91 NVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDE-KGNSKGYGFVHFETEEAANTSIDK 149 Query: 259 MDGEFLDGWVIFAEYARPR 315 ++G L+G ++ PR Sbjct: 150 VNGMLLNGKKVYVGKFIPR 168 Score = 45.4 bits (106), Expect = 1e-04 Identities = 25/77 (32%), Positives = 40/77 (51%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL+V L D LR AF+ +G + A+V+TD G SKGFGFV + +A + Sbjct: 288 NLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDE-EGRSKGFGFVCFNAASEATCAVTE 346 Query: 259 MDGEFLDGWVIFAEYAR 309 ++G + ++ A+ Sbjct: 347 LNGRVVGSKPLYVALAQ 363 Score = 40.0 bits (92), Expect = 0.006 Identities = 19/64 (29%), Positives = 38/64 (59%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N++V ++ + L+E F +G++ +V++ + G SKGFGFV + T E A ++ Sbjct: 184 NVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMS-KEDGKSKGFGFVAFETTEAAEAAVQA 242 Query: 259 MDGE 270 ++G+ Sbjct: 243 LNGK 246
>MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing protein 1| Length = 841 Score = 47.0 bits (110), Expect = 5e-05 Identities = 20/67 (29%), Positives = 36/67 (53%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ +S + + R F+++G +E + D TG SKGF +V+++ EDA + + Sbjct: 312 LFIRNISYEASEEDFRSLFSQYGALEEVHIAIDTRTGKSKGFLYVQFLKKEDATRAYRSL 371 Query: 262 DGEFLDG 282 D + G Sbjct: 372 DKQIFQG 378 Score = 43.5 bits (101), Expect = 5e-04 Identities = 26/81 (32%), Positives = 43/81 (53%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L V GL K T + LRE F+K G+V +++ R G S+ F F+ Y + + A + ++ Sbjct: 4 LIVKGLPKYYTEEKLREFFSKQGDVTDVKLMKKR-NGESRKFAFIGYKSADAAERAVKYF 62 Query: 262 DGEFLDGWVIFAEYARPRPPP 324 + F+D I E+A+ P Sbjct: 63 NKSFIDTARIEVEFAKTFSDP 83 Score = 34.3 bits (77), Expect = 0.31 Identities = 20/79 (25%), Positives = 37/79 (46%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 + + L T L E F FG+++ RV + ++GF FV + +++A + + Sbjct: 719 IIIKNLPFEATRKDLLELFGAFGQLKSVRV-PKKFDQSARGFAFVEFNLMKEAETAMSQL 777 Query: 262 DGEFLDGWVIFAEYARPRP 318 +G L G + +YA P Sbjct: 778 EGVHLLGRRLVMQYAEQDP 796 Score = 34.3 bits (77), Expect = 0.31 Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 5/72 (6%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITD---RVTG--FSKGFGFVRYVTVEDAAK 246 +FV L+ TT L + F A V T + +G S GFGFV + T E A Sbjct: 619 VFVKNLNFATTVQALSDLFKPLPGFVVATVKTKPDPKNSGKTLSMGFGFVEFRTKEQANV 678 Query: 247 GIEGMDGEFLDG 282 I +DG LDG Sbjct: 679 AISTLDGHVLDG 690
>SXL_MEGSC (O01671) Sex-lethal homolog| Length = 321 Score = 46.6 bits (109), Expect = 6e-05 Identities = 20/68 (29%), Positives = 38/68 (55%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL+V+ LS+ T + L F K+G++ ++ D+ TG +G F+R+ E+A + I Sbjct: 165 NLYVTNLSRSITDEQLETIFGKYGQIVQKNILRDKHTGTPRGVAFIRFNKREEAQEAISA 224 Query: 259 MDGEFLDG 282 ++ +G Sbjct: 225 LNNVIPEG 232 Score = 42.0 bits (97), Expect = 0.001 Identities = 24/78 (30%), Positives = 38/78 (48%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL V+ L + L F G + R++ D TG+S G+GFV + + DA + I Sbjct: 79 NLIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRAINN 138 Query: 259 MDGEFLDGWVIFAEYARP 312 ++G + I +ARP Sbjct: 139 LNGITVRNKRIKVSFARP 156
>RB87F_DROME (P48810) Heterogeneous nuclear ribonucleoprotein 87F (HRP36.1| protein) (Protein P11) Length = 385 Score = 46.6 bits (109), Expect = 6e-05 Identities = 22/47 (46%), Positives = 29/47 (61%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRY 222 LF+ GL RTT DGL+ F K+G + V+ D T S+GFGF+ Y Sbjct: 26 LFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITY 72 Score = 39.7 bits (91), Expect = 0.007 Identities = 17/47 (36%), Positives = 27/47 (57%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRY 222 LFV GL + LRE F FG++ +++D+ TG +GF F+ + Sbjct: 117 LFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEF 163
>PPIE_MOUSE (Q9QZH3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 301 Score = 46.6 bits (109), Expect = 6e-05 Identities = 26/77 (33%), Positives = 38/77 (49%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L+V GL++ L AF FG++ ++ D T +GF FV + EDAA I+ M Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67 Query: 262 DGEFLDGWVIFAEYARP 312 + L G I A+P Sbjct: 68 NESELFGRTIRVNLAKP 84
>PPIE_HUMAN (Q9UNP9) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 301 Score = 46.6 bits (109), Expect = 6e-05 Identities = 26/77 (33%), Positives = 38/77 (49%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L+V GL++ L AF FG++ ++ D T +GF FV + EDAA I+ M Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67 Query: 262 DGEFLDGWVIFAEYARP 312 + L G I A+P Sbjct: 68 NESELFGRTIRVNLAKP 84
>TRA2_DROVI (O02008) Transformer-2 sex-determining protein| Length = 272 Score = 46.2 bits (108), Expect = 8e-05 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 6/88 (6%) Frame = +1 Query: 88 VSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGMDG 267 V GL+ TT +RE F KFG +E +++ D T S+GF F+ + + DA + G Sbjct: 109 VFGLNTNTTQQKVRELFNKFGPIERIQMVIDAHTHRSRGFCFIYFENLGDARVAKDACTG 168 Query: 268 EFLDGWVIFAEYA------RPRPPPQMG 333 +DG I +Y+ P P MG Sbjct: 169 MEVDGRRIRVDYSITQRAHTPTPGVYMG 196
>DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) (Proline-rich Vg1 mRNA-binding protein) Length = 360 Score = 46.2 bits (108), Expect = 8e-05 Identities = 21/47 (44%), Positives = 31/47 (65%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRY 222 LFV GL TT + LR F+++GEV ++ D+ T S+GFGFV++ Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKF 58 Score = 31.6 bits (70), Expect = 2.0 Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 2/80 (2%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +FV G+ L+E F +FG V +I D +GFGF +T ED + + Sbjct: 116 IFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGF---ITFEDEQSVDQAV 172 Query: 262 DGEFLD--GWVIFAEYARPR 315 + F D G + + A PR Sbjct: 173 NMHFHDIMGKKVEVKRAEPR 192
>ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1| Length = 346 Score = 46.2 bits (108), Expect = 8e-05 Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 2/80 (2%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRY--VTVEDAAKGIE 255 +FV GL+ TT D +RE +++FGE+ V+ D T S+GFGFV + T DAA Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAM--- 81 Query: 256 GMDGEFLDGWVIFAEYARPR 315 +DG + + A PR Sbjct: 82 KQRPHIIDGKTVDPKRAVPR 101 Score = 42.4 bits (98), Expect = 0.001 Identities = 20/47 (42%), Positives = 29/47 (61%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRY 222 L+VSG+ + T D L E F K+G V + +I D+ T +GFGFV + Sbjct: 116 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 162
>DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 406 Score = 46.2 bits (108), Expect = 8e-05 Identities = 21/47 (44%), Positives = 31/47 (65%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRY 222 LFV GL TT + LR F+++GEV ++ D+ T S+GFGFV++ Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKF 58 Score = 34.3 bits (77), Expect = 0.31 Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 2/80 (2%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +FV G+ LRE F KFG V +I D +GFGF +T ED + + Sbjct: 115 IFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF---ITFEDEQSVDQAV 171 Query: 262 DGEFLD--GWVIFAEYARPR 315 + F D G + + A PR Sbjct: 172 NMHFHDIMGKKVEVKRAEPR 191
>DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 407 Score = 46.2 bits (108), Expect = 8e-05 Identities = 21/47 (44%), Positives = 31/47 (65%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRY 222 LFV GL TT + LR F+++GEV ++ D+ T S+GFGFV++ Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKF 58 Score = 34.3 bits (77), Expect = 0.31 Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 2/80 (2%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +FV G+ LRE F KFG V +I D +GFGF +T ED + + Sbjct: 115 IFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF---ITFEDEQSVDQAV 171 Query: 262 DGEFLD--GWVIFAEYARPR 315 + F D G + + A PR Sbjct: 172 NMHFHDIMGKKVEVKRAEPR 191
>RNPS1_RAT (Q6AYK1) RNA-binding protein with serine-rich domain 1| Length = 305 Score = 45.8 bits (107), Expect = 1e-04 Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 4/84 (4%) Frame = +1 Query: 88 VSGLSKRTTTDGLREAFAKFGEVEHARVITDRV-TGFSKGFGFVRYVTVEDAAKGIEGMD 264 + L++ T D + E F+ +G+++ + +R+ SKG+ +V + ++A K ++ MD Sbjct: 165 IGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMD 224 Query: 265 GEFLDGWVIFAEYAR---PRPPPQ 327 G +DG I A PRPPP+ Sbjct: 225 GGQIDGQEITATAVLAPWPRPPPR 248
>RNPS1_PONPY (Q5NVM8) RNA-binding protein with serine-rich domain 1| Length = 305 Score = 45.8 bits (107), Expect = 1e-04 Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 4/84 (4%) Frame = +1 Query: 88 VSGLSKRTTTDGLREAFAKFGEVEHARVITDRV-TGFSKGFGFVRYVTVEDAAKGIEGMD 264 + L++ T D + E F+ +G+++ + +R+ SKG+ +V + ++A K ++ MD Sbjct: 165 IGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMD 224 Query: 265 GEFLDGWVIFAEYAR---PRPPPQ 327 G +DG I A PRPPP+ Sbjct: 225 GGQIDGQEITATAVLAPWPRPPPR 248
>RNPS1_MOUSE (Q99M28) RNA-binding protein with serine-rich domain 1| Length = 305 Score = 45.8 bits (107), Expect = 1e-04 Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 4/84 (4%) Frame = +1 Query: 88 VSGLSKRTTTDGLREAFAKFGEVEHARVITDRV-TGFSKGFGFVRYVTVEDAAKGIEGMD 264 + L++ T D + E F+ +G+++ + +R+ SKG+ +V + ++A K ++ MD Sbjct: 165 IGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMD 224 Query: 265 GEFLDGWVIFAEYAR---PRPPPQ 327 G +DG I A PRPPP+ Sbjct: 225 GGQIDGQEITATAVLAPWPRPPPR 248
>RNPS1_MACFA (Q4R5N1) RNA-binding protein with serine-rich domain 1| Length = 305 Score = 45.8 bits (107), Expect = 1e-04 Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 4/84 (4%) Frame = +1 Query: 88 VSGLSKRTTTDGLREAFAKFGEVEHARVITDRV-TGFSKGFGFVRYVTVEDAAKGIEGMD 264 + L++ T D + E F+ +G+++ + +R+ SKG+ +V + ++A K ++ MD Sbjct: 165 IGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMD 224 Query: 265 GEFLDGWVIFAEYAR---PRPPPQ 327 G +DG I A PRPPP+ Sbjct: 225 GGQIDGQEITATAVLAPWPRPPPR 248
>RNPS1_HUMAN (Q15287) RNA-binding protein with serine-rich domain 1 (SR-related| protein LDC2) Length = 305 Score = 45.8 bits (107), Expect = 1e-04 Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 4/84 (4%) Frame = +1 Query: 88 VSGLSKRTTTDGLREAFAKFGEVEHARVITDRV-TGFSKGFGFVRYVTVEDAAKGIEGMD 264 + L++ T D + E F+ +G+++ + +R+ SKG+ +V + ++A K ++ MD Sbjct: 165 IGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMD 224 Query: 265 GEFLDGWVIFAEYAR---PRPPPQ 327 G +DG I A PRPPP+ Sbjct: 225 GGQIDGQEITATAVLAPWPRPPPR 248
>U2AF2_MOUSE (P26369) Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor| 65 kDa subunit) (U2 snRNP auxiliary factor large subunit) Length = 475 Score = 45.8 bits (107), Expect = 1e-04 Identities = 20/62 (32%), Positives = 32/62 (51%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ GL D ++E FG ++ ++ D TG SKG+ F YV + + I G+ Sbjct: 261 LFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGL 320 Query: 262 DG 267 +G Sbjct: 321 NG 322
>U2AF2_HUMAN (P26368) Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor| 65 kDa subunit) (U2 snRNP auxiliary factor large subunit) (hU2AF(65)) Length = 475 Score = 45.8 bits (107), Expect = 1e-04 Identities = 20/62 (32%), Positives = 32/62 (51%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ GL D ++E FG ++ ++ D TG SKG+ F YV + + I G+ Sbjct: 261 LFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGL 320 Query: 262 DG 267 +G Sbjct: 321 NG 322
>ROAA_HUMAN (Q99729) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)| (APOBEC-1-binding protein 1) (ABBP-1) Length = 331 Score = 45.8 bits (107), Expect = 1e-04 Identities = 27/70 (38%), Positives = 38/70 (54%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +FV GLS T+ L++ F KFGEV + D TG S+GFGF+ + K ++ Sbjct: 70 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 129 Query: 262 DGEFLDGWVI 291 + LDG VI Sbjct: 130 EHR-LDGRVI 138 Score = 34.3 bits (77), Expect = 0.31 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Frame = +1 Query: 82 LFVSGLSKRTTTDG-LREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIE 255 +FV GL+ + T+ +RE F +FGE+E + D +GF F+ + E K +E Sbjct: 154 IFVGGLNPESPTEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 212
>PPIE_DROME (Q9V3G3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 300 Score = 45.8 bits (107), Expect = 1e-04 Identities = 25/77 (32%), Positives = 38/77 (49%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 ++V GL+ T L AF FG++ ++ D + +GF F+ Y EDAA I+ M Sbjct: 8 IYVGGLADEVTERLLNNAFIPFGDIADIQMPADYESQRHRGFAFIEYEQSEDAAAAIDNM 67 Query: 262 DGEFLDGWVIFAEYARP 312 + L G I A+P Sbjct: 68 NDSELCGRTIRVNLAKP 84
>DAZL_CHICK (Q804A9) Deleted in azoospermia-like (DAZ-like protein)| Length = 289 Score = 45.8 bits (107), Expect = 1e-04 Identities = 23/58 (39%), Positives = 35/58 (60%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIE 255 +FV G+ R +R F ++G V+ ++ITDR TG SKG+GFV ++ D K +E Sbjct: 38 VFVGGIDIRMNEAEIRSYFEQYGTVKEVKIITDR-TGVSKGYGFVSFLDNVDVQKIVE 94
>RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-binding motif protein| 23) (RNA-binding region-containing protein 4) (Splicing factor SF2) Length = 439 Score = 45.4 bits (106), Expect = 1e-04 Identities = 24/67 (35%), Positives = 38/67 (56%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L+V L T D LR F FG++++ ++ D TG SKG+GF+ + E A + +E + Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 324 Query: 262 DGEFLDG 282 +G L G Sbjct: 325 NGFELAG 331 Score = 34.7 bits (78), Expect = 0.24 Identities = 21/73 (28%), Positives = 36/73 (49%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +F L+ R L + F+ G+V R+I+DR + SKG +V + ++ I G+ Sbjct: 168 VFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI-GL 226 Query: 262 DGEFLDGWVIFAE 300 G+ L G I + Sbjct: 227 TGQRLLGVPIIVQ 239
>ROAA_MOUSE (Q99020) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)| (CArG-binding factor-A) (CBF-A) Length = 285 Score = 45.4 bits (106), Expect = 1e-04 Identities = 27/70 (38%), Positives = 38/70 (54%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +FV GLS T+ L++ F KFGEV + D TG S+GFGF+ + K ++ Sbjct: 77 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQK 136 Query: 262 DGEFLDGWVI 291 + LDG VI Sbjct: 137 EHR-LDGRVI 145 Score = 37.4 bits (85), Expect = 0.037 Identities = 18/58 (31%), Positives = 30/58 (51%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIE 255 +FV GL+ T + +RE F +FGE+E + D +GF F+ + + K +E Sbjct: 161 IFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLE 218
>HRB1_YEAST (P38922) Protein HRB1 (Protein TOM34)| Length = 429 Score = 45.4 bits (106), Expect = 1e-04 Identities = 26/80 (32%), Positives = 39/80 (48%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 ++FV L+ +T + L E F++ G+V A +IT R G +G G V + +D + I Sbjct: 137 SIFVGNLTYDSTPEDLTEFFSQIGKVVRADIITSR--GHHRGMGTVEFTNSDDVDRAIRQ 194 Query: 259 MDGEFLDGWVIFAEYARPRP 318 DG F IF P P Sbjct: 195 YDGAFFMDRKIFVRQDNPPP 214
>BOULE_DROME (Q24207) Protein boule| Length = 228 Score = 45.4 bits (106), Expect = 1e-04 Identities = 22/55 (40%), Positives = 34/55 (61%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAK 246 +FV G+S TT L F+ +G V+ ++I DR G SKG+GFV + T ++A + Sbjct: 35 IFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDR-AGVSKGYGFVTFETEQEAQR 88
>MRD1_KLULA (Q6CQR6) Multiple RNA-binding domain-containing protein 1| Length = 878 Score = 45.4 bits (106), Expect = 1e-04 Identities = 21/67 (31%), Positives = 34/67 (50%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ + T D R+ F+ +GE+E + D TG SKGF +V + ++AA + Sbjct: 332 LFLRNILYTATEDDFRKLFSPYGELEEVHIAVDTRTGQSKGFAYVLFKNADNAATAFVEL 391 Query: 262 DGEFLDG 282 D + G Sbjct: 392 DKQIFQG 398 Score = 37.4 bits (85), Expect = 0.037 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 5/73 (6%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITD---RVTG--FSKGFGFVRYVTVEDAA 243 ++F+ L+ TT+ L E F F A+V T + G S GFGF + T E A Sbjct: 652 SIFIKNLNFSTTSQQLTEKFKPFNGFVVAQVKTKPDPKQPGKTLSMGFGFAEFKTKEQAN 711 Query: 244 KGIEGMDGEFLDG 282 I M+G LDG Sbjct: 712 AVISAMEGTILDG 724
>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5| Length = 388 Score = 45.4 bits (106), Expect = 1e-04 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 1/80 (1%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEV-EHARVITDRVTGFSKGFGFVRYVTVEDAAKGIE 255 N+FV L L + F+ FG + + +++ D +G SKGF F+ + + E + +E Sbjct: 101 NIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALE 160 Query: 256 GMDGEFLDGWVIFAEYARPR 315 M+G+FL I YA R Sbjct: 161 AMNGQFLCNRAITVSYAFKR 180 Score = 37.7 bits (86), Expect = 0.028 Identities = 20/58 (34%), Positives = 31/58 (53%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIE 255 ++V GL ++ + L E + G V + DRVT +GFGFV ++ EDA I+ Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIK 72
>SXL_CERCA (O61374) Sex-lethal homolog (CCSXL)| Length = 348 Score = 45.4 bits (106), Expect = 1e-04 Identities = 21/68 (30%), Positives = 37/68 (54%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL+V+ L + T D L F K+G + ++ D++TG +G FVR+ E+A + I Sbjct: 197 NLYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISA 256 Query: 259 MDGEFLDG 282 ++ +G Sbjct: 257 LNNVIPEG 264 Score = 42.0 bits (97), Expect = 0.001 Identities = 23/78 (29%), Positives = 38/78 (48%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL V+ L + T L F G + R++ D TG+S G+ FV + D+ + I+ Sbjct: 111 NLIVNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFAAETDSQRAIKS 170 Query: 259 MDGEFLDGWVIFAEYARP 312 ++G + + YARP Sbjct: 171 LNGITVRNKRLKVSYARP 188
>ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog| Length = 342 Score = 45.4 bits (106), Expect = 1e-04 Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYV---TVEDAAKGI 252 LF+ GL RTT + L++ F ++GE+ V+ D T S+GFGF+ Y V+DA Sbjct: 19 LFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDA---- 74 Query: 253 EGMDGEFLDGWVIFAEYARPR 315 + +DG V+ + A PR Sbjct: 75 QNARPHKVDGRVVEPKRAVPR 95 Score = 37.7 bits (86), Expect = 0.028 Identities = 16/47 (34%), Positives = 27/47 (57%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRY 222 LFV G+ + + LR+ F ++G V A ++ D+ T +GF FV + Sbjct: 110 LFVGGIKEEMEENDLRDYFKQYGTVVSAAIVVDKETRKKRGFAFVEF 156
>SAP49_SCHPO (O14102) Spliceosome-associated protein 49| Length = 335 Score = 45.1 bits (105), Expect = 2e-04 Identities = 28/79 (35%), Positives = 37/79 (46%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NLFV L L + F+ G++ A + G SKG+GFV Y + E A IE Sbjct: 100 NLFVGNLDPLVDERVLYDTFSALGQLVKAPQVARDENGRSKGYGFVSYDSFETADAAIEA 159 Query: 259 MDGEFLDGWVIFAEYARPR 315 M+ +FL I YA R Sbjct: 160 MNNQFLMNKPITVSYAFKR 178
>ROA2_MOUSE (O88569) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /| hnRNP B1) Length = 341 Score = 45.1 bits (105), Expect = 2e-04 Identities = 19/47 (40%), Positives = 31/47 (65%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRY 222 LFV G+ + T LR+ F ++G+++ +ITDR +G +GFGFV + Sbjct: 102 LFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTF 148 Score = 39.7 bits (91), Expect = 0.007 Identities = 25/86 (29%), Positives = 43/86 (50%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ GLS TT + LR + ++G++ V+ D + S+GFGFV + ++ + + Sbjct: 11 LFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAAR 70 Query: 262 DGEFLDGWVIFAEYARPRPPPQMGGA 339 +DG V+ + A R GA Sbjct: 71 P-HSIDGRVVEPKRAVAREESGKPGA 95
>ROA2_HUMAN (P22626) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /| hnRNP B1) Length = 353 Score = 45.1 bits (105), Expect = 2e-04 Identities = 19/47 (40%), Positives = 31/47 (65%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRY 222 LFV G+ + T LR+ F ++G+++ +ITDR +G +GFGFV + Sbjct: 114 LFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTF 160 Score = 39.7 bits (91), Expect = 0.007 Identities = 25/86 (29%), Positives = 43/86 (50%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ GLS TT + LR + ++G++ V+ D + S+GFGFV + ++ + + Sbjct: 23 LFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAAR 82 Query: 262 DGEFLDGWVIFAEYARPRPPPQMGGA 339 +DG V+ + A R GA Sbjct: 83 P-HSIDGRVVEPKRAVAREESGKPGA 107
>MRD1_ASPFU (Q4WJT7) Multiple RNA-binding domain-containing protein 1| Length = 825 Score = 45.1 bits (105), Expect = 2e-04 Identities = 22/67 (32%), Positives = 35/67 (52%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV L + L F+KFG++E V D + SKGF +V+Y+ + A + + + Sbjct: 303 LFVRNLPYDASESDLEPVFSKFGKIEEIHVAFDTRSTTSKGFAYVQYIEPDAAVQAYKEL 362 Query: 262 DGEFLDG 282 DG+ G Sbjct: 363 DGKHFQG 369 Score = 32.3 bits (72), Expect = 1.2 Identities = 17/75 (22%), Positives = 35/75 (46%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 + + L + T +R F +G++ RV + ++GFGF +V+ +A ++ + Sbjct: 704 IIIKNLPFQATKKDVRSLFGAYGQLRSVRV-PKKFDRSARGFGFADFVSAREAENAMDAL 762 Query: 262 DGEFLDGWVIFAEYA 306 L G + E+A Sbjct: 763 KNTHLLGRRLVLEFA 777 Score = 32.3 bits (72), Expect = 1.2 Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 5/71 (7%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITD---RVTG--FSKGFGFVRYVTVEDAAK 246 LFV L+ TT + E F AR+ T + G S GFGFV + T A Sbjct: 599 LFVKNLNFSTTNERFTEVFKPLDGFVSARIKTKPDPKRPGKTLSMGFGFVDFRTKAQAQA 658 Query: 247 GIEGMDGEFLD 279 + MDG LD Sbjct: 659 ALAAMDGYKLD 669
>RB97D_DROME (Q02926) Ribonucleoprotein RB97D| Length = 471 Score = 45.1 bits (105), Expect = 2e-04 Identities = 26/79 (32%), Positives = 41/79 (51%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ GL+ TT + L+ + ++G+V V+ D T S+GFGF+ Y + E Sbjct: 34 LFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQENR 93 Query: 262 DGEFLDGWVIFAEYARPRP 318 +DG + A+ A PRP Sbjct: 94 P-HIIDGKTVEAKRALPRP 111 Score = 44.3 bits (103), Expect = 3e-04 Identities = 22/57 (38%), Positives = 31/57 (54%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGI 252 LFV GL + LRE F +FG V +++TD+ TG +GF FV + + K I Sbjct: 125 LFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAI 181
>ROA1_XENLA (P17130) Heterogeneous nuclear ribonucleoproteins A1 homolog (hnRNP| A1) (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) Length = 365 Score = 45.1 bits (105), Expect = 2e-04 Identities = 19/47 (40%), Positives = 31/47 (65%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRY 222 +FV G+ + T D LRE F ++G++E ++TDR +G +GF FV + Sbjct: 107 IFVGGIKEDTEEDHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTF 153 Score = 45.1 bits (105), Expect = 2e-04 Identities = 28/86 (32%), Positives = 45/86 (52%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ GLS TT + LRE F ++G + V+ D + S+GFGFV Y++ ++ + Sbjct: 16 LFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMTAR 75 Query: 262 DGEFLDGWVIFAEYARPRPPPQMGGA 339 + +DG V+ + A R GA Sbjct: 76 PHK-VDGRVVEPKRAVSREDSSRPGA 100
>ROA0_HUMAN (Q13151) Heterogeneous nuclear ribonucleoprotein A0 (hnRNP A0)| Length = 305 Score = 45.1 bits (105), Expect = 2e-04 Identities = 30/85 (35%), Positives = 41/85 (48%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV GL L E F++FG VE A +I D+ +G +GFGFV Y DAA + Sbjct: 100 LFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFV-YFQNHDAADKAAVV 158 Query: 262 DGEFLDGWVIFAEYARPRPPPQMGG 336 + G + + A P+ GG Sbjct: 159 KFHPIQGHRVEVKKAVPKEDIYSGG 183 Score = 42.4 bits (98), Expect = 0.001 Identities = 22/53 (41%), Positives = 31/53 (58%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDA 240 LF+ GL+ +T+ GLR F FG + V+ + T S+ FGFV Y VE+A Sbjct: 9 LFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
>RNP24_SCHPO (Q09100) RNA-binding protein rnp24| Length = 369 Score = 45.1 bits (105), Expect = 2e-04 Identities = 22/58 (37%), Positives = 32/58 (55%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIE 255 LFV L TT L+E F + G++ R++T TG KGFGFV + ++ K +E Sbjct: 230 LFVGNLDFETTDADLKEHFGQVGQIRRVRLMTFEDTGKCKGFGFVDFPDIDTCMKAME 287
>PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g36660| (Poly(A)-binding protein At2g36660) (PABP) Length = 609 Score = 44.7 bits (104), Expect = 2e-04 Identities = 23/84 (27%), Positives = 45/84 (53%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 N++V ++ T + LR+ F++ G + +++ D G SKGFGFV + T E+A ++ Sbjct: 305 NIYVKNVNVAVTEEELRKHFSQCGTITSTKLMCDE-KGKSKGFGFVCFSTPEEAIDAVKT 363 Query: 259 MDGEFLDGWVIFAEYARPRPPPQM 330 G+ G ++ A+ + +M Sbjct: 364 FHGQMFHGKPLYVAIAQKKEDRKM 387 Score = 38.9 bits (89), Expect = 0.013 Identities = 20/63 (31%), Positives = 33/63 (52%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL++ L + D LRE FA+FG++ + D +G+ FV + EDA + E Sbjct: 202 NLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDE-NRLCRGYAFVNFDNPEDARRAAET 260 Query: 259 MDG 267 ++G Sbjct: 261 VNG 263 Score = 38.5 bits (88), Expect = 0.017 Identities = 23/86 (26%), Positives = 42/86 (48%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 +L+V L T L +AFA+F + R+ D +G S +G+ +++ +DA IE Sbjct: 25 SLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIEK 84 Query: 259 MDGEFLDGWVIFAEYARPRPPPQMGG 336 + L+G +I ++ P + G Sbjct: 85 KNNSLLNGKMIRVMWSVRAPDARRNG 110 Score = 36.6 bits (83), Expect = 0.063 Identities = 22/55 (40%), Positives = 32/55 (58%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAA 243 N+FV L + T L++ F KFG + +V T G S+G+GFV++ EDAA Sbjct: 113 NVFVKNLPESVTNAVLQDMFKKFGNIVSCKVATLE-DGKSRGYGFVQF-EQEDAA 165
>MRD1_EMENI (Q5BGA9) Multiple RNA-binding domain-containing protein 1| Length = 819 Score = 44.7 bits (104), Expect = 2e-04 Identities = 23/67 (34%), Positives = 32/67 (47%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV LS T L F+ FG++E V D SKGF +V+Y + A + + Sbjct: 297 LFVRNLSYETKESELEPVFSPFGKIEEIHVAFDTRFTTSKGFAYVQYADPDAAVEAYRNL 356 Query: 262 DGEFLDG 282 DG+ G Sbjct: 357 DGKIFQG 363 Score = 32.3 bits (72), Expect = 1.2 Identities = 17/75 (22%), Positives = 35/75 (46%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 + + L + T +R F +G++ RV + ++GFGF +V+ +A ++ + Sbjct: 699 IIIKNLPFQATKKDVRSLFGAYGQLRSVRV-PKKFDRSARGFGFADFVSAREAENAMDAL 757 Query: 262 DGEFLDGWVIFAEYA 306 L G + E+A Sbjct: 758 KNTHLLGRRLVLEFA 772 Score = 30.8 bits (68), Expect = 3.5 Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 5/71 (7%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVIT-----DRVTGFSKGFGFVRYVTVEDAAK 246 LF+ L+ TT L EAF AR+ T + S GFGF + T A Sbjct: 594 LFIKNLNFSTTNQSLIEAFRPLDGFVSARIKTKPDPKNPGQTLSMGFGFADFKTKAQAQA 653 Query: 247 GIEGMDGEFLD 279 + M+G LD Sbjct: 654 ALAVMNGYTLD 664
>U2AF2_DROME (Q24562) Splicing factor U2AF 50 kDa subunit (U2 auxiliary factor| 50 kDa subunit) (U2 snRNP auxiliary factor large subunit) Length = 416 Score = 44.3 bits (103), Expect = 3e-04 Identities = 19/62 (30%), Positives = 32/62 (51%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +F+ GL D ++E FG++ ++ D TG SKG+ F YV + + I G+ Sbjct: 209 IFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLSKGYAFCEYVDLSITDQSIAGL 268 Query: 262 DG 267 +G Sbjct: 269 NG 270
>RB27C_DROME (P48809) Heterogeneous nuclear ribonucleoprotein 27C (Hrb27-C)| (hnRNP 48) (HRP48.1) Length = 421 Score = 44.3 bits (103), Expect = 3e-04 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 2/87 (2%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV GLS TT + L F +FG++ V+ + +G S+GFGFV + + ++ Sbjct: 9 LFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN- 67 Query: 262 DGEFLDGWVIFAEYARPR--PPPQMGG 336 LDG I + PR P+ GG Sbjct: 68 GPHTLDGRTIDPKPCNPRTLQKPKKGG 94 Score = 33.5 bits (75), Expect = 0.53 Identities = 15/47 (31%), Positives = 26/47 (55%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRY 222 +F+ GL T LR F ++G+V ++ D+ S+GFGF+ + Sbjct: 98 VFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSF 144
>PUF68_DROME (Q8T6B9) Poly U-binding splicing factor half pint (68 kDa poly| U-binding splicing factor) (Protein half pint) (PUF60 homolog) Length = 637 Score = 44.3 bits (103), Expect = 3e-04 Identities = 27/82 (32%), Positives = 39/82 (47%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 ++V +S D +R AF FG ++ + D +T KGF FV Y E A +E M Sbjct: 132 VYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 191 Query: 262 DGEFLDGWVIFAEYARPRPPPQ 327 +G + G I + RP PQ Sbjct: 192 NGALMGGRNI--KVGRPSNMPQ 211
>DAZ3_HUMAN (Q9NR90) Deleted in azoospermia protein 3| Length = 486 Score = 43.9 bits (102), Expect = 4e-04 Identities = 21/55 (38%), Positives = 32/55 (58%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAK 246 +FV G+ R + F ++G V+ ++IT+R TG SKG+GFV +V D K Sbjct: 42 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQK 95
>DAZ4_HUMAN (Q86SG3) Deleted in azoospermia protein 4| Length = 579 Score = 43.9 bits (102), Expect = 4e-04 Identities = 21/55 (38%), Positives = 32/55 (58%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAK 246 +FV G+ R + F ++G V+ ++IT+R TG SKG+GFV +V D K Sbjct: 207 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQK 260 Score = 43.9 bits (102), Expect = 4e-04 Identities = 21/55 (38%), Positives = 32/55 (58%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAK 246 +FV G+ R + F ++G V+ ++IT+R TG SKG+GFV +V D K Sbjct: 42 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQK 95
>RRP2_SPIOL (P82277) Plastid-specific 30S ribosomal protein 2, chloroplast| precursor (PSRP-2) Length = 260 Score = 43.9 bits (102), Expect = 4e-04 Identities = 24/67 (35%), Positives = 36/67 (53%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L+V + + D LR + G +E A V+ D+ +G S+ FGFV TVEDA IE + Sbjct: 86 LYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVIEKL 145 Query: 262 DGEFLDG 282 + + G Sbjct: 146 NDTEIGG 152 Score = 40.8 bits (94), Expect = 0.003 Identities = 20/67 (29%), Positives = 38/67 (56%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +++ L+K T + L++ F++ G+V A+V T S GFGFV + + E+ I+ + Sbjct: 186 VYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQAL 245 Query: 262 DGEFLDG 282 + L+G Sbjct: 246 NNSVLEG 252
>DAZ2_HUMAN (Q13117) Deleted in azoospermia protein 2| Length = 558 Score = 43.9 bits (102), Expect = 4e-04 Identities = 21/55 (38%), Positives = 32/55 (58%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAK 246 +FV G+ R + F ++G V+ ++IT+R TG SKG+GFV +V D K Sbjct: 42 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQK 95
>DAZ1_HUMAN (Q9NQZ3) Deleted in azoospermia protein 1| Length = 744 Score = 43.9 bits (102), Expect = 4e-04 Identities = 21/55 (38%), Positives = 32/55 (58%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAK 246 +FV G+ R + F ++G V+ ++IT+R TG SKG+GFV +V D K Sbjct: 372 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQK 425 Score = 43.9 bits (102), Expect = 4e-04 Identities = 21/55 (38%), Positives = 32/55 (58%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAK 246 +FV G+ R + F ++G V+ ++IT+R TG SKG+GFV +V D K Sbjct: 207 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQK 260 Score = 43.9 bits (102), Expect = 4e-04 Identities = 21/55 (38%), Positives = 32/55 (58%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAK 246 +FV G+ R + F ++G V+ ++IT+R TG SKG+GFV +V D K Sbjct: 42 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQK 95
>RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-binding motif protein| 19) Length = 960 Score = 43.5 bits (101), Expect = 5e-04 Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 3/70 (4%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTG---FSKGFGFVRYVTVEDAAKGI 252 LF+ L+ TT + L+E F+K G V+ + + S GFGFV Y E A K + Sbjct: 732 LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKAL 791 Query: 253 EGMDGEFLDG 282 + + G +DG Sbjct: 792 KQLQGHVVDG 801 Score = 42.4 bits (98), Expect = 0.001 Identities = 21/67 (31%), Positives = 33/67 (49%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV L +T + L + F+K+G + D +T KGF F+ ++ E A K + Sbjct: 404 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEV 463 Query: 262 DGEFLDG 282 DG+ G Sbjct: 464 DGQVFQG 470 Score = 35.4 bits (80), Expect = 0.14 Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Frame = +1 Query: 124 LREAFAKFGEVEHARVITDRV-TGFSKGFGFVRYVTVEDAAKGIEGM 261 +RE F+ FGE++ R+ TG +GFGFV ++T +DA + + Sbjct: 848 IRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNAL 894 Score = 29.6 bits (65), Expect = 7.7 Identities = 20/76 (26%), Positives = 34/76 (44%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L V L + R+ FA FG + + + F K FGF+ + + E+A K + Sbjct: 4 LIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRK-FGFIGFKSEEEAQKAQKHF 62 Query: 262 DGEFLDGWVIFAEYAR 309 + F+D I E+ + Sbjct: 63 NKSFIDTSRITVEFCK 78
>ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (hnRNP core| protein A1-A) (PEN repeat clone P9) Length = 365 Score = 43.1 bits (100), Expect = 7e-04 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 3/81 (3%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRY---VTVEDAAKGI 252 LF+ GL RTT + L+ F K+G + V+ D T S+GFGF+ Y +++A K Sbjct: 33 LFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKS- 91 Query: 253 EGMDGEFLDGWVIFAEYARPR 315 +DG V+ + A PR Sbjct: 92 ---RPHKIDGRVVEPKRAVPR 109 Score = 40.0 bits (92), Expect = 0.006 Identities = 23/85 (27%), Positives = 39/85 (45%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV L +R+ F FG + ++ D+ TG +GF FV + + K + Sbjct: 124 LFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQK 183 Query: 262 DGEFLDGWVIFAEYARPRPPPQMGG 336 + L+G ++ + A P+ Q GG Sbjct: 184 QHQ-LNGKMVDVKKALPKQNDQQGG 207
>CUGB1_MOUSE (P28659) CUG triplet repeat RNA-binding protein 1 (CUG-BP1)| (RNA-binding protein BRUNOL-2) (Deadenylation factor CUG-BP) (Deadenylation factor EDEN-BP) (Brain protein F41) Length = 486 Score = 43.1 bits (100), Expect = 7e-04 Identities = 24/63 (38%), Positives = 31/63 (49%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NLF+ L + L + F FG V A+V D+ T SK FGFV Y A I+ Sbjct: 402 NLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQS 461 Query: 259 MDG 267 M+G Sbjct: 462 MNG 464 Score = 39.3 bits (90), Expect = 0.010 Identities = 20/60 (33%), Positives = 33/60 (55%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ +SK+ T + +R F+ FG++E R++ G S+G FV + T A I+ M Sbjct: 110 LFIGMISKKCTENDIRVMFSSFGQIEECRILRG-PDGLSRGCAFVTFTTRTMAQTAIKAM 168
>CUGB1_HUMAN (Q92879) CUG triplet repeat RNA-binding protein 1 (CUG-BP1)| (RNA-binding protein BRUNOL-2) (Deadenylation factor CUG-BP) (50 kDa Nuclear polyadenylated RNA-binding protein) (EDEN-BP) Length = 486 Score = 43.1 bits (100), Expect = 7e-04 Identities = 24/63 (38%), Positives = 31/63 (49%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NLF+ L + L + F FG V A+V D+ T SK FGFV Y A I+ Sbjct: 402 NLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQS 461 Query: 259 MDG 267 M+G Sbjct: 462 MNG 464 Score = 39.3 bits (90), Expect = 0.010 Identities = 20/60 (33%), Positives = 33/60 (55%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ +SK+ T + +R F+ FG++E R++ G S+G FV + T A I+ M Sbjct: 110 LFIGMISKKCTENDIRVMFSSFGQIEECRILRG-PDGLSRGCAFVTFTTRAMAQTAIKAM 168
>MRD1_CANGA (Q6FXP4) Multiple RNA-binding domain-containing protein 1| Length = 861 Score = 43.1 bits (100), Expect = 7e-04 Identities = 20/67 (29%), Positives = 35/67 (52%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ + +T D ++ F+ +GE++ V D TG SKGF +V + E+A + + Sbjct: 327 LFLRNILYSSTEDDFKKLFSPYGELKEVHVAVDTRTGNSKGFAYVLFAKPEEAVQAYIEL 386 Query: 262 DGEFLDG 282 D + G Sbjct: 387 DKQIFQG 393 Score = 40.0 bits (92), Expect = 0.006 Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 5/73 (6%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVIT-----DRVTGFSKGFGFVRYVTVEDAA 243 ++F+ L+ +TT+ L + F F A+V T + S GFGFV + T E A Sbjct: 641 SIFIKNLNFKTTSQQLTDRFKVFSGFVVAQVKTKPDPKQKNKVLSMGFGFVEFRTKEQAT 700 Query: 244 KGIEGMDGEFLDG 282 I MDG +DG Sbjct: 701 AVISAMDGTVIDG 713
>RO21_XENLA (P51989) Heterogeneous nuclear ribonucleoprotein A2 homolog 1| (hnRNP A2(A)) Length = 346 Score = 43.1 bits (100), Expect = 7e-04 Identities = 18/47 (38%), Positives = 30/47 (63%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRY 222 LFV G+ + T LRE F ++G+++ +ITD+ +G +GF FV + Sbjct: 102 LFVGGIKEDTEEHHLREYFEEYGKIDSIEIITDKQSGKKRGFAFVTF 148 Score = 38.1 bits (87), Expect = 0.022 Identities = 18/47 (38%), Positives = 28/47 (59%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRY 222 LF+ GLS TT + LR + ++G + V+ D + S+GFGFV + Sbjct: 11 LFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTF 57
>PPIL4_MOUSE (Q9CXG3) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) (Cyclophilin-like protein PPIL4) Length = 492 Score = 42.7 bits (99), Expect = 9e-04 Identities = 24/76 (31%), Positives = 37/76 (48%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV L+ TT + L F++FG + VI D TG S + F+ + ED K M Sbjct: 242 LFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDCEKAFFKM 301 Query: 262 DGEFLDGWVIFAEYAR 309 D +D I ++++ Sbjct: 302 DNVLIDDRRIHVDFSQ 317
>PPIL4_HUMAN (Q8WUA2) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) (Cyclophilin-like protein PPIL4) Length = 492 Score = 42.7 bits (99), Expect = 9e-04 Identities = 24/76 (31%), Positives = 37/76 (48%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV L+ TT + L F++FG + VI D TG S + F+ + ED K M Sbjct: 242 LFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDCEKAFFKM 301 Query: 262 DGEFLDGWVIFAEYAR 309 D +D I ++++ Sbjct: 302 DNVLIDDRRIHVDFSQ 317
>NCBP2_XENLA (P52299) Nuclear cap binding protein subunit 2 (20 kDa nuclear cap| binding protein) (NCBP 20 kDa subunit) (CBP20) (Fragment) Length = 148 Score = 42.7 bits (99), Expect = 9e-04 Identities = 24/74 (32%), Positives = 40/74 (54%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L+V LS TT + + E F+K G+V+ + D+V + GF FV Y T DA + + Sbjct: 34 LYVGNLSFYTTEEQIHELFSKSGDVKRIVMGLDKVKKTACGFCFVEYYTRADAGTAMRFI 93 Query: 262 DGEFLDGWVIFAEY 303 +G LD ++ ++ Sbjct: 94 NGTRLDDRIVRTDW 107
>MINT_MOUSE (Q62504) Msx2-interacting protein (SPEN homolog)| (SMART/HDAC1-associated repressor protein) Length = 3644 Score = 42.7 bits (99), Expect = 9e-04 Identities = 23/65 (35%), Positives = 35/65 (53%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ L K TT LR F +FGE+ + +V G + + F++Y + K I+ M Sbjct: 441 LFIGNLEKTTTYHDLRNIFQRFGEI--VDIDIKKVNGVPQ-YAFLQYCDIASVCKAIKKM 497 Query: 262 DGEFL 276 DGE+L Sbjct: 498 DGEYL 502
>MINT_HUMAN (Q96T58) Msx2-interacting protein (SPEN homolog)| (SMART/HDAC1-associated repressor protein) Length = 3664 Score = 42.7 bits (99), Expect = 9e-04 Identities = 23/65 (35%), Positives = 35/65 (53%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ L K TT LR F +FGE+ + +V G + + F++Y + K I+ M Sbjct: 440 LFIGNLEKTTTYHDLRNIFQRFGEI--VDIDIKKVNGVPQ-YAFLQYCDIASVCKAIKKM 496 Query: 262 DGEFL 276 DGE+L Sbjct: 497 DGEYL 501
>RBM28_HUMAN (Q9NW13) RNA-binding protein 28 (RNA-binding motif protein 28)| Length = 758 Score = 42.7 bits (99), Expect = 9e-04 Identities = 23/75 (30%), Positives = 42/75 (56%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L + LS + + D L+ FA+FG V I + G +GFGFV++ + +A K ++GM Sbjct: 115 LIIRNLSFKCSEDDLKTVFAQFGAVLEVN-IPRKPDGKMRGFGFVQFKNLLEAGKALKGM 173 Query: 262 DGEFLDGWVIFAEYA 306 + + + G + ++A Sbjct: 174 NMKEIKGRTVAVDWA 188 Score = 37.7 bits (86), Expect = 0.028 Identities = 17/58 (29%), Positives = 33/58 (56%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIE 255 LFV L ++ L E F++ G V+ V+T++ + +GFG+V + +ED + ++ Sbjct: 5 LFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALK 62 Score = 36.2 bits (82), Expect = 0.082 Identities = 18/55 (32%), Positives = 31/55 (56%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAK 246 +F+ LS + + L E +FGE+++ R++ T SKG F +++T E A K Sbjct: 336 VFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQK 390
>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated| protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor SF3b 49 kDa subunit) Length = 424 Score = 42.7 bits (99), Expect = 9e-04 Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 1/77 (1%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEV-EHARVITDRVTGFSKGFGFVRYVTVEDAAKGIE 255 N+F+ L L + F+ FG + + +++ D TG SKG+ F+ + + + + IE Sbjct: 101 NIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIE 160 Query: 256 GMDGEFLDGWVIFAEYA 306 M+G++L I YA Sbjct: 161 AMNGQYLCNRPITVSYA 177 Score = 42.7 bits (99), Expect = 9e-04 Identities = 22/61 (36%), Positives = 37/61 (60%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 ++V GL ++ + L E F + G V + + DRVTG +G+GFV +++ EDA I+ M Sbjct: 15 VYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIM 74 Query: 262 D 264 + Sbjct: 75 N 75
>TRA2_DROME (P19018) Transformer-2 sex-determining protein| Length = 264 Score = 42.4 bits (98), Expect = 0.001 Identities = 22/73 (30%), Positives = 39/73 (53%) Frame = +1 Query: 88 VSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGMDG 267 V GL+ T+ +RE F K+G +E +++ D T S+GF F+ + + DA + G Sbjct: 101 VFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSG 160 Query: 268 EFLDGWVIFAEYA 306 +DG I +++ Sbjct: 161 IEVDGRRIRVDFS 173
>RU17_XENTR (Q66II8) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 471 Score = 42.4 bits (98), Expect = 0.001 Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 5/90 (5%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV+ ++ TT LR F +G ++ ++ ++ +G +G+ F+ Y D + Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYNKRSGKPRGYAFIEYEHERDMHSAYKHA 164 Query: 262 DGEFLDGWVIFAEYARPRP-----PPQMGG 336 DG+ +DG + + R R P ++GG Sbjct: 165 DGKKIDGRRVLVDVERGRTVKGWRPRRLGG 194
>RAVR2_HUMAN (Q9HCJ3) Protein raver-2| Length = 691 Score = 42.0 bits (97), Expect = 0.001 Identities = 21/64 (32%), Positives = 34/64 (53%) Frame = +1 Query: 112 TTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGMDGEFLDGWVI 291 T++ E +G +E ++ VTG SKG+GFV Y+ + AAK + G L + Sbjct: 154 TSEEFEELVRAYGNIERCFLVYSEVTGHSKGYGFVEYMKKDFAAKARLELLGRQLGASAL 213 Query: 292 FAEY 303 FA++ Sbjct: 214 FAQW 217
>RU17_HUMAN (P08621) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 437 Score = 42.0 bits (97), Expect = 0.001 Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 5/90 (5%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV+ ++ TT LR F +G ++ ++ + +G +G+ F+ Y D + Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHA 164 Query: 262 DGEFLDGWVIFAEYARPRP-----PPQMGG 336 DG+ +DG + + R R P ++GG Sbjct: 165 DGKKIDGRRVLVDVERGRTVKGWRPRRLGG 194
>RU17_MOUSE (Q62376) U1 small nuclear ribonucleoprotein 70 kDa (U1 SNRNP 70| kDa) (snRNP70) Length = 448 Score = 42.0 bits (97), Expect = 0.001 Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 5/90 (5%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV+ ++ TT LR F +G ++ ++ + +G +G+ F+ Y D + Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHA 164 Query: 262 DGEFLDGWVIFAEYARPRP-----PPQMGG 336 DG+ +DG + + R R P ++GG Sbjct: 165 DGKKIDGRRVLVDVERGRTVKGWRPRRLGG 194
>DAZL_BRARE (Q9YGW7) Deleted in azoospermia-like (DAZ-like protein) (zDazl)| Length = 229 Score = 42.0 bits (97), Expect = 0.001 Identities = 20/47 (42%), Positives = 30/47 (63%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRY 222 LFV G+ + + +RE FAK+G V+ ++IT R G KG+GFV + Sbjct: 49 LFVGGIDMKVDENEIREFFAKYGSVKEVKIITYR-GGICKGYGFVYF 94
>FUSIP_MOUSE (Q9R0U0) FUS-interacting serine-arginine-rich protein 1| (TLS-associated protein with Ser-Arg repeats) (TLS-associated protein with SR repeats) (TASR) (TLS-associated serine-arginine protein) (TLS-associated SR protein) (Neural-specific SR pro Length = 262 Score = 42.0 bits (97), Expect = 0.001 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 2/86 (2%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 +LFV ++ T ++ LR F ++G + V D T +GF +V++ V DA + Sbjct: 11 SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHN 70 Query: 259 MDGEFLDGWVIFAEYAR--PRPPPQM 330 +D +++ G I ++A+ + P QM Sbjct: 71 LDRKWICGRQIEIQFAQGDRKTPNQM 96
>FUSIP_HUMAN (O75494) FUS-interacting serine-arginine-rich protein 1| (TLS-associated protein with Ser-Arg repeats) (TLS-associated protein with SR repeats) (TASR) (TLS-associated serine-arginine protein) (TLS-associated SR protein) (40 kDa SR-repressor pr Length = 262 Score = 42.0 bits (97), Expect = 0.001 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 2/86 (2%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 +LFV ++ T ++ LR F ++G + V D T +GF +V++ V DA + Sbjct: 11 SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHN 70 Query: 259 MDGEFLDGWVIFAEYAR--PRPPPQM 330 +D +++ G I ++A+ + P QM Sbjct: 71 LDRKWICGRQIEIQFAQGDRKTPNQM 96
>MRD1_YARLI (Q6CEW9) Multiple RNA-binding domain-containing protein 1| Length = 828 Score = 42.0 bits (97), Expect = 0.001 Identities = 21/78 (26%), Positives = 38/78 (48%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ L + R+ F+++GE+E + + TG KGF V++ E+A E Sbjct: 303 LFLRNLLYTAKEEDFRQLFSQYGELEEVHLPINTKTGQCKGFAHVQFEDPENAIAAYEAQ 362 Query: 262 DGEFLDGWVIFAEYARPR 315 DG+ G ++ +P+ Sbjct: 363 DGKIFQGRLLHILPGKPK 380 Score = 35.8 bits (81), Expect = 0.11 Identities = 19/76 (25%), Positives = 36/76 (47%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 + + L T +++ F FG ++ RV + S+GF F YV+ ++A + + Sbjct: 705 ILIKNLPFEATKKDVQKLFGAFGSLKTVRV-PKKFNSESRGFAFAEYVSAKEAEHAMSAL 763 Query: 262 DGEFLDGWVIFAEYAR 309 G L G + +YA+ Sbjct: 764 QGTHLLGRRLVLQYAQ 779 Score = 33.5 bits (75), Expect = 0.53 Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 5/73 (6%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARV-----ITDRVTGFSKGFGFVRYVTVEDAA 243 ++FV L+ +TT+ L +AF A+V ++ S GFGFV + + E A Sbjct: 606 SVFVKNLNFKTTSRVLTDAFKALDGFLVAQVKMKPDSKNKGKFLSMGFGFVEFSSKEAAE 665 Query: 244 KGIEGMDGEFLDG 282 + MDG LDG Sbjct: 666 IAQKAMDGHVLDG 678
>MRD1_ASHGO (Q75A83) Multiple RNA-binding domain-containing protein 1| Length = 838 Score = 42.0 bits (97), Expect = 0.001 Identities = 21/67 (31%), Positives = 33/67 (49%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ + T + ++ F+ +GE+E V D TG SKGF +V + E AA + Sbjct: 303 LFLRNILYDATEEDFKQLFSPYGELEEVHVAVDTRTGQSKGFAYVLFKDPEHAANAYIEL 362 Query: 262 DGEFLDG 282 D + G Sbjct: 363 DKQIFQG 369 Score = 38.9 bits (89), Expect = 0.013 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 5/73 (6%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVIT-----DRVTGFSKGFGFVRYVTVEDAA 243 ++FV L+ TT+ L E F F A+V T + S GFGF+ + T E A Sbjct: 613 SIFVKNLNFSTTSAQLAEKFKPFSGFVVAQVKTKPDPKNSDKKLSMGFGFIEFRTKEQAG 672 Query: 244 KGIEGMDGEFLDG 282 I MDG +DG Sbjct: 673 AVIAAMDGAVIDG 685 Score = 32.7 bits (73), Expect = 0.91 Identities = 19/75 (25%), Positives = 36/75 (48%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 + V L T + E F+ FG+++ RV + ++GF FV ++ +A ++ + Sbjct: 714 IIVKNLPFEATRKDVFELFSSFGQLKSVRV-PKKFDKSARGFAFVEFLLPSEAENAMDQL 772 Query: 262 DGEFLDGWVIFAEYA 306 G L G + +YA Sbjct: 773 QGVHLLGRRLVMQYA 787 Score = 31.2 bits (69), Expect = 2.6 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%) Frame = +1 Query: 151 EVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGMDGEFLD----GWVIFAEYARPRP 318 ++ +++ D+ +G S+ F F+ Y + +DA IE +G F+D + +A PR Sbjct: 36 QITDVKIVKDK-SGNSRRFAFIGYRSEQDAFDAIEYFNGSFIDTARIEVAMAKSFADPRV 94 Query: 319 PPQM 330 P M Sbjct: 95 PTPM 98
>RNPS1_XENLA (Q5XG24) RNA-binding protein with serine-rich domain 1| Length = 283 Score = 41.6 bits (96), Expect = 0.002 Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 1/71 (1%) Frame = +1 Query: 88 VSGLSKRTTTDGLREAFAKFGEVEHARVITDRV-TGFSKGFGFVRYVTVEDAAKGIEGMD 264 + L++ T D + E F+ +G+++ + DR SKG+ +V + E+A K ++ MD Sbjct: 142 IGRLTRNVTKDHILEIFSTYGKIKMIDMPVDRYHPHLSKGYAYVEFEAPEEAEKALKHMD 201 Query: 265 GEFLDGWVIFA 297 G +DG I A Sbjct: 202 GGQIDGQEITA 212
>PPIL4_USTMA (P0C196) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 551 Score = 41.6 bits (96), Expect = 0.002 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 3/76 (3%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV L+ T +D L F++FG++ VI D+ TG S + F+ + +DA + M Sbjct: 264 LFVCKLNPVTRSDDLELIFSRFGKILSCEVIKDKKTGDSLQYAFIEFDKKDDAERAYFKM 323 Query: 262 DGEFLDG---WVIFAE 300 +D WV F++ Sbjct: 324 QNVLVDDRRIWVDFSQ 339
>RAVR2_MOUSE (Q7TPD6) Protein raver-2| Length = 673 Score = 41.6 bits (96), Expect = 0.002 Identities = 22/74 (29%), Positives = 37/74 (50%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L ++ L T + E +G +E ++ VTG SKG+GFV Y+ + AAK + Sbjct: 133 LCITNLPISFTLEEFEELVRAYGNIERCFLVYSEVTGHSKGYGFVEYMKKDFAAKARLEL 192 Query: 262 DGEFLDGWVIFAEY 303 G + +FA++ Sbjct: 193 LGRQMGASALFAQW 206
>RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2| Length = 326 Score = 41.6 bits (96), Expect = 0.002 Identities = 22/82 (26%), Positives = 39/82 (47%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +FV GL T + F+++GE+ + ++ D+ TG SKGF F+ Y ++ Sbjct: 38 IFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNF 97 Query: 262 DGEFLDGWVIFAEYARPRPPPQ 327 +G + G I ++ PQ Sbjct: 98 NGIKIKGRTIRVDHVSNYRAPQ 119
>HNRPQ_HUMAN (O60506) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Glycine-and tyrosine-rich RNA-binding protein) (GRY-RBP) (NS1-associated protein 1) Length = 623 Score = 41.2 bits (95), Expect = 0.003 Identities = 23/77 (29%), Positives = 42/77 (54%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV L+ T + L +AF++FG++E + + D + F+ + + A K +E M Sbjct: 340 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKD--------YAFIHFDERDGAVKAMEEM 391 Query: 262 DGEFLDGWVIFAEYARP 312 +G+ L+G I +A+P Sbjct: 392 NGKDLEGENIEIVFAKP 408 Score = 35.4 bits (80), Expect = 0.14 Identities = 17/58 (29%), Positives = 31/58 (53%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIE 255 +FV + + D L F K G + R++ D +TG ++G+ FV + T E A + ++ Sbjct: 164 IFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 221
>YNL0_YEAST (P53927) Hypothetical 25.4 kDa protein in CYB5-LEU4 intergenic| region Length = 220 Score = 41.2 bits (95), Expect = 0.003 Identities = 22/70 (31%), Positives = 39/70 (55%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 ++VS L L + FA+FG+++ R+ ++ TG S+ +GF+ +V EDA E M Sbjct: 93 IYVSRLPHGFHEKELSKYFAQFGDLKEVRLARNKKTGNSRHYGFLEFVNKEDAMIAQESM 152 Query: 262 DGEFLDGWVI 291 + L G ++ Sbjct: 153 NNYLLMGHLL 162
>RSD1_SCHPO (O13845) RNA-binding protein rsd1| Length = 604 Score = 40.8 bits (94), Expect = 0.003 Identities = 22/73 (30%), Positives = 41/73 (56%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +FVS L+ R T+ L + F + G V A+++ D+++G SKG +V + ED+ + + Sbjct: 242 VFVSQLANRLTSRELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCH-EDSVQAAIAL 300 Query: 262 DGEFLDGWVIFAE 300 G+ L G + + Sbjct: 301 SGKRLLGLPVIVQ 313 Score = 34.7 bits (78), Expect = 0.24 Identities = 21/67 (31%), Positives = 33/67 (49%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 L VS + T + ++ F FG++E + D SKGFG+++Y A +E M Sbjct: 342 LCVSNIHFNLTDEDVKAIFEPFGDIEFVHLQRDDQNR-SKGFGYIQYRNPISARNALEKM 400 Query: 262 DGEFLDG 282 +G L G Sbjct: 401 NGFDLAG 407
>RBM19_MOUSE (Q8R3C6) Probable RNA-binding protein 19 (RNA-binding motif protein| 19) Length = 952 Score = 40.8 bits (94), Expect = 0.003 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTG---FSKGFGFVRYVTVEDAAKGI 252 LF+ L+ TT + L+ F+K G ++ + + S GFGFV Y E A K + Sbjct: 724 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKAL 783 Query: 253 EGMDGEFLDG 282 + + G +DG Sbjct: 784 KQLQGHTVDG 793 Score = 40.4 bits (93), Expect = 0.004 Identities = 21/67 (31%), Positives = 33/67 (49%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV LS ++ + L + F+ +G + D +T KGF FV ++ E A K + Sbjct: 402 LFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEV 461 Query: 262 DGEFLDG 282 DG+ G Sbjct: 462 DGQVFQG 468 Score = 37.4 bits (85), Expect = 0.037 Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Frame = +1 Query: 124 LREAFAKFGEVEHARVITDRV-TGFSKGFGFVRYVTVEDAAKGIEGM 261 +RE F+ FGE++ R+ TG +GFGFV ++T +DA K + Sbjct: 840 IRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNAL 886
>LARK_DROME (Q94901) RNA-binding protein lark| Length = 352 Score = 40.8 bits (94), Expect = 0.003 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 2/86 (2%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +FV L+ +T +RE F K+G V ++ + +GFV V D I+ + Sbjct: 88 IFVGNLTDKTRAPEVRELFQKYGTVVECDIV--------RNYGFVHLDCVGDVQDAIKEL 139 Query: 262 DGEFLDGWVIFAEY--ARPRPPPQMG 333 +G +DG + + +R RP P MG Sbjct: 140 NGRVVDGQPLKVQVSTSRVRPKPGMG 165 Score = 39.7 bits (91), Expect = 0.007 Identities = 24/81 (29%), Positives = 37/81 (45%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ L ++T LR F K+G V V+ K +GFV T + I+ + Sbjct: 9 LFIGNLDEKTQATELRALFEKYGTVVECDVV--------KNYGFVHMETEQQGRDAIQNL 60 Query: 262 DGEFLDGWVIFAEYARPRPPP 324 +G L+ + I E A+ R P Sbjct: 61 NGYTLNEFAIKVEAAKSRRAP 81
>HNRPC_RAT (P17132) Heterogeneous nuclear ribonucleoprotein C (hnRNP C) (hnRNP| core protein C) (Fragment) Length = 158 Score = 40.4 bits (93), Expect = 0.004 Identities = 22/58 (37%), Positives = 30/58 (51%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIE 255 +FV GLS T + +RE F FGEVE + D T +GF F+ + E K +E Sbjct: 36 IFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 93
>MRD1_NEUCR (Q7SG09) Multiple RNA-binding domain-containing protein 1| Length = 827 Score = 40.4 bits (93), Expect = 0.004 Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 5/72 (6%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITD---RVTG--FSKGFGFVRYVTVEDAA 243 +LFV L+ TT+ GL +AF A+V T + G S GFGFV + T + A Sbjct: 600 SLFVRNLNFSTTSQGLTDAFKHLDGFVQAKVKTKTDPKKPGQVLSMGFGFVAFRTKDQAQ 659 Query: 244 KGIEGMDGEFLD 279 ++ MDG+ LD Sbjct: 660 AALKVMDGQVLD 671 Score = 40.4 bits (93), Expect = 0.004 Identities = 26/70 (37%), Positives = 33/70 (47%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ LS T D +RE FAKFG + V D G SKGF +RY A + Sbjct: 310 LFLRNLSYTVTEDDVREHFAKFGILVEVHVPLDS-KGHSKGFAMIRYEKPASALAAFQ-T 367 Query: 262 DGEFLDGWVI 291 DG G ++ Sbjct: 368 DGTVFQGRIV 377 Score = 30.4 bits (67), Expect = 4.5 Identities = 22/77 (28%), Positives = 36/77 (46%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +FV L T R+ F+ G R +TD ++ GFV Y + EDAA+ ++ Sbjct: 7 IFVKNLPPTITEAEFRKHFSAEG-----RQVTDVKLIPARHIGFVGYKSAEDAARAVKYF 61 Query: 262 DGEFLDGWVIFAEYARP 312 + F+ I + A+P Sbjct: 62 NRSFIRMSRISVDIAKP 78
>HNRPQ_RAT (Q7TP47) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Liver regeneration-related protein LRRG077) Length = 533 Score = 40.0 bits (92), Expect = 0.006 Identities = 22/77 (28%), Positives = 42/77 (54%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV L+ T + L ++F++FG++E + + D + F+ + + A K +E M Sbjct: 250 LFVRNLANTVTEEILEKSFSQFGKLERVKKLKD--------YAFIHFDERDGAVKAMEEM 301 Query: 262 DGEFLDGWVIFAEYARP 312 +G+ L+G I +A+P Sbjct: 302 NGKDLEGENIEIVFAKP 318 Score = 35.4 bits (80), Expect = 0.14 Identities = 17/58 (29%), Positives = 31/58 (53%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIE 255 +FV + + D L F K G + R++ D +TG ++G+ FV + T E A + ++ Sbjct: 74 IFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 131
>RU17_DROME (P17133) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) Length = 448 Score = 40.0 bits (92), Expect = 0.006 Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 5/90 (5%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF++ ++ T+ LR F +G ++ +I D+ +G KG+ F+ Y D + Sbjct: 104 LFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHA 163 Query: 262 DGEFLDGWVIFAEYARPRP-----PPQMGG 336 DG+ +D + + R R P ++GG Sbjct: 164 DGKKIDSKRVLVDVERARTVKGWLPRRLGG 193
>HNRPQ_MOUSE (Q7TMK9) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Glycine-and tyrosine-rich RNA-binding protein) (GRY-RBP) (NS1-associated protein 1) (pp68) Length = 623 Score = 40.0 bits (92), Expect = 0.006 Identities = 22/77 (28%), Positives = 42/77 (54%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV L+ T + L ++F++FG++E + + D + F+ + + A K +E M Sbjct: 340 LFVRNLANTVTEEILEKSFSQFGKLERVKKLKD--------YAFIHFDERDGAVKAMEEM 391 Query: 262 DGEFLDGWVIFAEYARP 312 +G+ L+G I +A+P Sbjct: 392 NGKDLEGENIEIVFAKP 408 Score = 35.4 bits (80), Expect = 0.14 Identities = 17/58 (29%), Positives = 31/58 (53%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIE 255 +FV + + D L F K G + R++ D +TG ++G+ FV + T E A + ++ Sbjct: 164 IFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 221
>NOP12_YARLI (Q6C2Q7) Nucleolar protein 12| Length = 509 Score = 40.0 bits (92), Expect = 0.006 Identities = 18/57 (31%), Positives = 30/57 (52%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGI 252 +FV L + L EAF+ G+VE+ R++ D T KGF +V++ V + + Sbjct: 276 VFVGALDFEEQEESLWEAFSSCGDVEYVRIVRDPKTNVGKGFAYVQFKDVNSVEQAL 332
>MRD1_YEAST (Q06106) Multiple RNA-binding domain-containing protein 1| Length = 887 Score = 40.0 bits (92), Expect = 0.006 Identities = 20/67 (29%), Positives = 33/67 (49%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ + + + R+ F+ FGE+E V D TG SKGF +V + ++A + Sbjct: 347 LFLRNILYTSKEEDFRKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDSKNAVNAYVEL 406 Query: 262 DGEFLDG 282 D + G Sbjct: 407 DKQIFQG 413 Score = 38.5 bits (88), Expect = 0.017 Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 19/102 (18%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHA---------------RVITDRVTGFSKGFGFV 216 + V GL T D LRE F K +H+ +++ DR G S+ FGF+ Sbjct: 4 IIVKGLPVYLTDDNLREHFTKRLRQKHSHQAVNGSGPDLITDVKILRDR-NGESRRFGFI 62 Query: 217 RYVTVEDAAKGIEGMDGEFLDGWVI----FAEYARPRPPPQM 330 Y EDA +E +G F++ I +A PR P M Sbjct: 63 GYRNEEDAFDAVEYFNGSFINTSKIEVSMAKSFADPRVPQPM 104 Score = 37.0 bits (84), Expect = 0.048 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 5/73 (6%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITD-----RVTGFSKGFGFVRYVTVEDAA 243 ++F+ L+ TT L + F F A+V T + S GFGFV + T E A Sbjct: 664 SIFIKNLNFSTTNQNLTDRFKVFTGFVVAQVKTKPDPKHQGKTLSMGFGFVEFRTKEQAN 723 Query: 244 KGIEGMDGEFLDG 282 I MDG +DG Sbjct: 724 AVIAAMDGTVIDG 736 Score = 31.6 bits (70), Expect = 2.0 Identities = 19/75 (25%), Positives = 36/75 (48%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 + V L T + E F FG+++ RV + ++GF FV ++ ++A ++ + Sbjct: 765 IIVKNLPFEATRKDVFELFNSFGQLKSVRV-PKKFDKSARGFAFVEFLLPKEAENAMDQL 823 Query: 262 DGEFLDGWVIFAEYA 306 G L G + +YA Sbjct: 824 HGVHLLGRRLVMQYA 838
>RBP56_HUMAN (Q92804) TATA-binding protein-associated factor 2N (RNA-binding| protein 56) (TAFII68) (TAF(II)68) Length = 592 Score = 39.7 bits (91), Expect = 0.007 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 8/95 (8%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHAR--------VITDRVTGFSKGFGFVRYVTVED 237 +FV GL + +TD + E F + G ++ + + TD+ TG KG V + Sbjct: 236 IFVQGLGEGVSTDQVGEFFKQIGIIKTNKKTGKPMINLYTDKDTGKPKGEATVSFDDPPS 295 Query: 238 AAKGIEGMDGEFLDGWVIFAEYARPRPPPQMGGAT 342 A I+ DG+ G +I +A RP GG + Sbjct: 296 AKAAIDWFDGKEFHGNIIKVSFATRRPEFMRGGGS 330
>MRD1_SCHPO (O13620) Multiple RNA-binding domain-containing protein 1| Length = 833 Score = 39.7 bits (91), Expect = 0.007 Identities = 20/78 (25%), Positives = 37/78 (47%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+ L+ D L+ F FG++E + D+ T KGF ++ + +DA + + Sbjct: 325 LFLRNLTYSCAEDDLKSLFGPFGQLEQVHMPIDKKTNNPKGFAYIDFHDADDAVRAYLEL 384 Query: 262 DGEFLDGWVIFAEYARPR 315 D + G ++ A+ R Sbjct: 385 DAKPFQGRLLHVLPAKAR 402 Score = 29.6 bits (65), Expect = 7.7 Identities = 16/75 (21%), Positives = 32/75 (42%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 + + L T ++ +G++ RV + ++GF F +VT +AA + + Sbjct: 723 ILIKNLPFEATKKDVQSLLGAYGQLRSVRV-PKKFDRSARGFAFAEFVTAREAANAMRAL 781 Query: 262 DGEFLDGWVIFAEYA 306 L G + +YA Sbjct: 782 KNTHLLGRHLVLQYA 796
>SART3_PONPY (Q5REG1) Squamous cell carcinoma antigen recognized by T-cells 3| (SART-3) Length = 981 Score = 39.7 bits (91), Expect = 0.007 Identities = 25/77 (32%), Positives = 37/77 (48%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+SGL T + L E G V+ R++T+R G KG +V Y A++ + M Sbjct: 821 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKM 879 Query: 262 DGEFLDGWVIFAEYARP 312 DG + VI + P Sbjct: 880 DGMTIKENVIKVAISNP 896
>PPIL4_NEUCR (Q871A4) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 494 Score = 39.7 bits (91), Expect = 0.007 Identities = 21/76 (27%), Positives = 38/76 (50%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV L+ TT + L F++FG++ VI D+ TG S + F+ + + + M Sbjct: 255 LFVCKLNPVTTDEDLELIFSRFGKILSCEVIRDQKTGDSLQYAFIEFEDKKSCEEAYSKM 314 Query: 262 DGEFLDGWVIFAEYAR 309 D +D I ++++ Sbjct: 315 DSVLIDDRRIHVDFSQ 330
>PPIL4_EMENI (Q5ARI5) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 461 Score = 39.7 bits (91), Expect = 0.007 Identities = 21/76 (27%), Positives = 39/76 (51%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LFV L+ T + L F++FG++ VI D+ TG S + F+ + + +D + M Sbjct: 250 LFVCKLNPVTQDEDLELIFSRFGKILSCEVIRDKRTGDSLQYAFIEFESQKDCEQAYFKM 309 Query: 262 DGEFLDGWVIFAEYAR 309 G +D I ++++ Sbjct: 310 QGVLIDDHRIHVDFSQ 325
>SART3_HUMAN (Q15020) Squamous cell carcinoma antigen recognized by T-cells 3| (SART-3) (hSART-3) (Tat-interacting protein of 110 kDa) (Tip110) Length = 963 Score = 39.3 bits (90), Expect = 0.010 Identities = 24/77 (31%), Positives = 37/77 (48%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 LF+SGL T + L E G V+ R++T+R G KG +V Y A++ + M Sbjct: 803 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKM 861 Query: 262 DGEFLDGWVIFAEYARP 312 DG + +I + P Sbjct: 862 DGMTIKENIIKVAISNP 878
>RBMS2_MOUSE (Q8VC70) RNA-binding motif, single-stranded-interacting protein 2| Length = 383 Score = 39.3 bits (90), Expect = 0.010 Identities = 18/61 (29%), Positives = 31/61 (50%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL++ GL TT L + +G++ + I D+ T KG+GFV + + A K + Sbjct: 59 NLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSSAQKAVTA 118 Query: 259 M 261 + Sbjct: 119 L 119 Score = 33.1 bits (74), Expect = 0.70 Identities = 19/66 (28%), Positives = 31/66 (46%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 258 NL++S L L FG+V R++ D +G S+G GF R + E I Sbjct: 138 NLYISNLPLSMDEQELEGMLKPFGQVISTRILRD-TSGASRGVGFARMESTEKCEAIITH 196 Query: 259 MDGEFL 276 +G+++ Sbjct: 197 FNGKYI 202
>TCG1_SCHPO (Q9HEQ9) Single-stranded TG1-3 DNA-binding protein| Length = 348 Score = 39.3 bits (90), Expect = 0.010 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 13/77 (16%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGF-------------SKGFGFVR 219 +++VSGLS T +GL+E F + AR+ + + +GFGFV Sbjct: 206 SIYVSGLSVTLTNEGLKEMFDAYNPTR-ARIAVRSLPPYIIRRIKLRGEQRRGRGFGFVS 264 Query: 220 YVTVEDAAKGIEGMDGE 270 + ED ++ IE M+G+ Sbjct: 265 FANAEDQSRAIEEMNGK 281
>RBM28_MOUSE (Q8CGC6) RNA-binding protein 28 (RNA-binding motif protein 28)| Length = 749 Score = 39.3 bits (90), Expect = 0.010 Identities = 18/58 (31%), Positives = 33/58 (56%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIE 255 LFV L +D L E F++ G V+ V+T++ + +GFG+V + +ED + ++ Sbjct: 5 LFVGRLPPSARSDQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALK 62 Score = 36.6 bits (83), Expect = 0.063 Identities = 18/55 (32%), Positives = 31/55 (56%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAK 246 +F+ LS + + L E +FG++++ RV+ T SKG F +++T E A K Sbjct: 326 VFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQK 380
>YG41_SCHPO (O60176) Hypothetical RNA-binding protein C23E6.01c in chromosome| II Length = 473 Score = 38.9 bits (89), Expect = 0.013 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 1/80 (1%) Frame = +1 Query: 79 NLFVSGLSKRTTTDGLREAFA-KFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIE 255 ++FV LS + FA ++ + A+++TD T S+G+GFVR+ D + Sbjct: 187 SIFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALA 246 Query: 256 GMDGEFLDGWVIFAEYARPR 315 M G+ I A P+ Sbjct: 247 EMQGQICGDRPIRVGLATPK 266 Score = 36.6 bits (83), Expect = 0.063 Identities = 24/80 (30%), Positives = 38/80 (47%) Frame = +1 Query: 82 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 261 +FV GLSK + + L+ F FGE+ + ++ KG GFV++V + A I + Sbjct: 305 VFVGGLSKFVSEEELKYLFQNFGEIVYVKIPP------GKGCGFVQFVNRQSAEIAINQL 358 Query: 262 DGEFLDGWVIFAEYARPRPP 321 G L I + R + P Sbjct: 359 QGYPLGNSRIRLSWGRNQNP 378 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,187,017 Number of Sequences: 219361 Number of extensions: 1804768 Number of successful extensions: 6133 Number of sequences better than 10.0: 380 Number of HSP's better than 10.0 without gapping: 5642 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6061 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5824436538 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
