>CSN3_ARATH (Q8W575) COP9 signalosome complex subunit 3 (Signalosome subunit 3)|
           (FUSCA protein 11) (FUSCA11)
          Length = 429

 Score =  244 bits (622), Expect = 2e-64
 Identities = 124/208 (59%), Positives = 156/208 (75%), Gaps = 1/208 (0%)
 Frame = +2

Query: 14  KALELLHNAVTAPMSSLNAITVEAYKKYVLVSLIQSGQVP-PFPKYTSSTAQRNLKNHAQ 190
           KALELL+N VTAPM  +NAI +EAYKKY+LVSLI +GQ     PK  S+ AQR+ KN+  
Sbjct: 199 KALELLYNVVTAPMHQVNAIALEAYKKYILVSLIHNGQFTNTLPKCASTAAQRSFKNYTG 258

Query: 191 IYVDVSTCYGTGSYSDLETFIQSNAEAFQTDNNLGLVKQVLSSMYKRNIQRLTQTYLTLS 370
            Y+++  CY  G   +LE  + +    F+ D NLGLVKQ +SS+YKRNI RLTQ YLTLS
Sbjct: 259 PYIELGNCYNDGKIGELEALVVARNAEFEEDKNLGLVKQAVSSLYKRNILRLTQKYLTLS 318

Query: 371 LEDIASSVQLNTPKEAEMHVLRMIEDGEIYATINQKDGMVSFNEDPEQYKSSEMVEHIDS 550
           L+DIA+ VQL   KEAEMHVL+MI+DG+I+A INQKDGMV F EDPEQYKSSEM+E +DS
Sbjct: 319 LQDIANMVQLGNAKEAEMHVLQMIQDGQIHALINQKDGMVRFLEDPEQYKSSEMIEIMDS 378

Query: 551 SIQRLMALSKKLTSIDQNISCDHAFLMK 634
            IQR + LSK L ++D+++SCD  +L K
Sbjct: 379 VIQRTIGLSKNLLAMDESLSCDPLYLGK 406

>CSN3_BRARE (Q6P2U9) COP9 signalosome complex subunit 3 (Signalosome subunit 3)|
          Length = 423

 Score =  204 bits (518), Expect = 2e-52
 Identities = 102/207 (49%), Positives = 145/207 (70%)
 Frame = +2

Query: 14  KALELLHNAVTAPMSSLNAITVEAYKKYVLVSLIQSGQVPPFPKYTSSTAQRNLKNHAQI 193
           +AL     A+T P  +++ I +EAYKKY+LVSLI  G+V   PKYTS    R +K  +  
Sbjct: 200 RALYFFEQAITTPAMAVSHIMLEAYKKYILVSLILHGKVQQLPKYTSQIVGRFIKPLSNA 259

Query: 194 YVDVSTCYGTGSYSDLETFIQSNAEAFQTDNNLGLVKQVLSSMYKRNIQRLTQTYLTLSL 373
           Y +++  Y T + ++L   +  ++E F  DNN GLVKQ LSS+YK+NIQRLT+T+LTLSL
Sbjct: 260 YHELAQIYATNNPAELRALVNKHSETFTRDNNTGLVKQCLSSLYKKNIQRLTKTFLTLSL 319

Query: 374 EDIASSVQLNTPKEAEMHVLRMIEDGEIYATINQKDGMVSFNEDPEQYKSSEMVEHIDSS 553
           +D+AS VQL+ P+EAE +VL MIEDGEIYA+INQKDGMV F+++PE+Y +  M+  ID  
Sbjct: 320 QDMASRVQLSGPQEAEKYVLHMIEDGEIYASINQKDGMVCFHDNPEKYNNPAMLHKIDQE 379

Query: 554 IQRLMALSKKLTSIDQNISCDHAFLMK 634
           + + + L +KL S+DQ I+ +  F+ K
Sbjct: 380 MLKCIELDEKLKSMDQEITVNPQFVQK 406

>CSN3_MOUSE (O88543) COP9 signalosome complex subunit 3 (Signalosome subunit 3)|
           (SGN3) (JAB1-containing signalosome subunit 3)
          Length = 422

 Score =  203 bits (516), Expect = 4e-52
 Identities = 100/207 (48%), Positives = 148/207 (71%)
 Frame = +2

Query: 14  KALELLHNAVTAPMSSLNAITVEAYKKYVLVSLIQSGQVPPFPKYTSSTAQRNLKNHAQI 193
           +AL     A+T P  +++ I +E+YKKY+LVSLI  G+V   PKYTS    R +K  +  
Sbjct: 199 RALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQQLPKYTSQIVGRFIKPLSNA 258

Query: 194 YVDVSTCYGTGSYSDLETFIQSNAEAFQTDNNLGLVKQVLSSMYKRNIQRLTQTYLTLSL 373
           Y +++  Y T + S+L   +  ++E F  DNN+GLVKQ LSS+YK+NIQRLT+T+LTLSL
Sbjct: 259 YHELAQVYSTNNPSELRNLVSKHSETFTRDNNMGLVKQCLSSLYKKNIQRLTKTFLTLSL 318

Query: 374 EDIASSVQLNTPKEAEMHVLRMIEDGEIYATINQKDGMVSFNEDPEQYKSSEMVEHIDSS 553
           +D+AS VQL+ P+EAE +VL MIEDGEI+A+INQKDGMVSF+++PE+Y +  M+ +ID  
Sbjct: 319 QDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVSFHDNPEKYNNPAMLHNIDQE 378

Query: 554 IQRLMALSKKLTSIDQNISCDHAFLMK 634
           + + + L ++L ++DQ I+ +  F+ K
Sbjct: 379 MLKCIELDERLKAMDQEITVNPQFVQK 405

>CSN3_HUMAN (Q9UNS2) COP9 signalosome complex subunit 3 (Signalosome subunit 3)|
           (SGN3) (JAB1-containing signalosome subunit 3)
          Length = 422

 Score =  203 bits (516), Expect = 4e-52
 Identities = 100/207 (48%), Positives = 148/207 (71%)
 Frame = +2

Query: 14  KALELLHNAVTAPMSSLNAITVEAYKKYVLVSLIQSGQVPPFPKYTSSTAQRNLKNHAQI 193
           +AL     A+T P  +++ I +E+YKKY+LVSLI  G+V   PKYTS    R +K  +  
Sbjct: 199 RALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQQLPKYTSQIVGRFIKPLSNA 258

Query: 194 YVDVSTCYGTGSYSDLETFIQSNAEAFQTDNNLGLVKQVLSSMYKRNIQRLTQTYLTLSL 373
           Y +++  Y T + S+L   +  ++E F  DNN+GLVKQ LSS+YK+NIQRLT+T+LTLSL
Sbjct: 259 YHELAQVYSTNNPSELRNLVNKHSETFTRDNNMGLVKQCLSSLYKKNIQRLTKTFLTLSL 318

Query: 374 EDIASSVQLNTPKEAEMHVLRMIEDGEIYATINQKDGMVSFNEDPEQYKSSEMVEHIDSS 553
           +D+AS VQL+ P+EAE +VL MIEDGEI+A+INQKDGMVSF+++PE+Y +  M+ +ID  
Sbjct: 319 QDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVSFHDNPEKYNNPAMLHNIDQE 378

Query: 554 IQRLMALSKKLTSIDQNISCDHAFLMK 634
           + + + L ++L ++DQ I+ +  F+ K
Sbjct: 379 MLKCIELDERLKAMDQEITVNPQFVQK 405

>CSN3_XENLA (Q7ZTN8) COP9 signalosome complex subunit 3 (Signalosome subunit 3)|
          Length = 423

 Score =  196 bits (497), Expect = 6e-50
 Identities = 98/207 (47%), Positives = 143/207 (69%)
 Frame = +2

Query: 14  KALELLHNAVTAPMSSLNAITVEAYKKYVLVSLIQSGQVPPFPKYTSSTAQRNLKNHAQI 193
           +A+     A+T P  +++ I +EAYKKY+LVSLI  G+V   PKYTS    R +K  +  
Sbjct: 200 RAMYFYEQAITTPAMAVSHIMLEAYKKYILVSLILHGKVQQLPKYTSQVVGRFIKPLSNA 259

Query: 194 YVDVSTCYGTGSYSDLETFIQSNAEAFQTDNNLGLVKQVLSSMYKRNIQRLTQTYLTLSL 373
           Y +++  Y T + ++L   +  + E F  DNN+GLVKQ LSS+YK+NIQRLT+T+LTLSL
Sbjct: 260 YHELAQVYSTNNPAELRNLVSKHNETFTRDNNMGLVKQCLSSLYKKNIQRLTKTFLTLSL 319

Query: 374 EDIASSVQLNTPKEAEMHVLRMIEDGEIYATINQKDGMVSFNEDPEQYKSSEMVEHIDSS 553
           +D+AS VQL+  +EAE +VL MIEDGEI+A+INQKDGMV F++ PE+Y +  M+ +ID  
Sbjct: 320 QDMASRVQLSGAQEAEKYVLYMIEDGEIFASINQKDGMVCFHDSPEKYNNPAMLHNIDQE 379

Query: 554 IQRLMALSKKLTSIDQNISCDHAFLMK 634
           + R + L  +L ++DQ I+ +  F+ K
Sbjct: 380 MLRCIDLDDRLKAMDQEITVNPQFVQK 406

>CSN3_DROME (Q8SYG2) COP9 signalosome complex subunit 3 (Signalosome subunit 3)|
           (Dch3)
          Length = 445

 Score =  171 bits (433), Expect = 2e-42
 Identities = 90/207 (43%), Positives = 133/207 (64%)
 Frame = +2

Query: 14  KALELLHNAVTAPMSSLNAITVEAYKKYVLVSLIQSGQVPPFPKYTSSTAQRNLKNHAQI 193
           +AL      +T P  +++ I +EAYKK+++VSLI  G++   PK T     R +K  A  
Sbjct: 217 RALYFFEVCITTPAMAMSHIMLEAYKKFLMVSLIVEGKIAYIPKNTQVIG-RFMKPMANH 275

Query: 194 YVDVSTCYGTGSYSDLETFIQSNAEAFQTDNNLGLVKQVLSSMYKRNIQRLTQTYLTLSL 373
           Y D+   Y   S  +L   I   +EAF  DNN+GL KQV +S+YKRNIQRLT+T+LTLSL
Sbjct: 276 YHDLVNVYANSSSEELRIIILKYSEAFTRDNNMGLAKQVATSLYKRNIQRLTKTFLTLSL 335

Query: 374 EDIASSVQLNTPKEAEMHVLRMIEDGEIYATINQKDGMVSFNEDPEQYKSSEMVEHIDSS 553
            D+AS VQL +  EAE ++L MI+ GEIYA+INQKDGMV F +DPE+Y S EM  ++ ++
Sbjct: 336 SDVASRVQLASAVEAERYILNMIKSGEIYASINQKDGMVLFKDDPEKYNSPEMFLNVQNN 395

Query: 554 IQRLMALSKKLTSIDQNISCDHAFLMK 634
           I  ++   +++  +++ I  +  ++ K
Sbjct: 396 ITHVLDQVRQINKMEEEIILNPMYVKK 422

>PSD3_MOUSE (P14685) 26S proteasome non-ATPase regulatory subunit 3 (26S|
           proteasome regulatory subunit S3) (Proteasome subunit
           p58) (Transplantation antigen P91A) (Tum-P91A antigen)
          Length = 530

 Score = 69.3 bits (168), Expect = 9e-12
 Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 1/176 (0%)
 Frame = +2

Query: 5   EIPKALELLHNAVT-APMSSLNAITVEAYKKYVLVSLIQSGQVPPFPKYTSSTAQRNLKN 181
           E  +A   + NA+  AP  +        +K  ++V L+  G++P   ++     Q +LK 
Sbjct: 297 EYSEARRTMTNALRKAPQHTAVGFKQTVHKLLIVVELLL-GEIPDRLQFR----QPSLKR 351

Query: 182 HAQIYVDVSTCYGTGSYSDLETFIQSNAEAFQTDNNLGLVKQVLSSMYKRNIQRLTQTYL 361
               Y  ++    TG+ +     +    E FQTD    L+ ++  ++ K  ++ ++ +Y 
Sbjct: 352 SLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQTDGTYTLIIRLRHNVIKTGVRMISLSYS 411

Query: 362 TLSLEDIASSVQLNTPKEAEMHVLRMIEDGEIYATINQKDGMVSFNEDPEQYKSSE 529
            +SL DIA  +QL++P++AE  V + I DG I A+IN + G V   E  + Y + E
Sbjct: 412 RISLADIAQKLQLDSPEDAEFIVAKAIRDGVIEASINHEKGYVQSKEMIDIYSTRE 467

>PSD3_HUMAN (O43242) 26S proteasome non-ATPase regulatory subunit 3 (26S|
           proteasome regulatory subunit S3) (Proteasome subunit
           p58)
          Length = 534

 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 1/176 (0%)
 Frame = +2

Query: 5   EIPKALELLHNAVT-APMSSLNAITVEAYKKYVLVSLIQSGQVPPFPKYTSSTAQRNLKN 181
           E  +A   + NA+  AP  +        +K  ++V L+  G++P   ++     Q +LK 
Sbjct: 301 EYSEARRTMTNALRKAPQHTAVGFKQTVHKLLIVVELLL-GEIPDRLQFR----QPSLKR 355

Query: 182 HAQIYVDVSTCYGTGSYSDLETFIQSNAEAFQTDNNLGLVKQVLSSMYKRNIQRLTQTYL 361
               Y  ++    TG+ +     +    E FQ D    L+ ++  ++ K  ++ ++ +Y 
Sbjct: 356 SLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQADGTYTLIIRLRHNVIKTGVRMISLSYS 415

Query: 362 TLSLEDIASSVQLNTPKEAEMHVLRMIEDGEIYATINQKDGMVSFNEDPEQYKSSE 529
            +SL DIA  +QL++P++AE  V + I DG I A+IN + G V   E  + Y + E
Sbjct: 416 RISLADIAQKLQLDSPEDAEFIVAKAIRDGVIEASINHEKGYVQSKEMIDIYSTRE 471

>CSN3_BRAOL (P68358) COP9 signalosome complex subunit 3 (Signalosome subunit 3)|
           (FUSCA protein 11) (FUSCA11) (Fragments)
          Length = 55

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = +2

Query: 410 KEAEMHVLRMIEDGEIYATINQKDGMVSFNEDPEQYK 520
           KEAEMHVL+MI+DG+I+A INQKDGMV F EDPEQYK
Sbjct: 19  KEAEMHVLQMIQDGQIHALINQKDGMVRFLEDPEQYK 55

>PSD32_ARATH (Q9LQR8) Probable 26S proteasome non-ATPase regulatory subunit 3b|
           (26S proteasome subunit S3-b)
          Length = 487

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 50/183 (27%), Positives = 93/183 (50%), Gaps = 6/183 (3%)
 Frame = +2

Query: 26  LLHNAVTAPMSSLNAITVEAYKKYVLVSLIQSGQVPPFPKYTSSTAQRNLKNHAQIYVDV 205
           LL  A  AP++SL    ++  K  ++V L+  G++P    +T    ++ L+     Y ++
Sbjct: 262 LLQAARKAPVASLG-FRIQCNKWAIIVRLLL-GEIPERSIFTQKGMEKTLRP----YFEL 315

Query: 206 STCYGTGSYSDLETF--IQSN-AEAFQTDNNLGLVKQVLSSMYKRNIQRLTQTYLTLSLE 376
           +     G   DLE F  IQ   A+ F  D    L+ ++  ++ +  ++ ++ +Y  +SL+
Sbjct: 316 TNAVRIG---DLELFGKIQEKFAKTFAEDRTHNLIVRLRHNVIRTGLRNISISYSRISLQ 372

Query: 377 DIASSVQLNTPK---EAEMHVLRMIEDGEIYATINQKDGMVSFNEDPEQYKSSEMVEHID 547
           D+A  ++LN+     +AE  V + I DG I ATI+ K+G +   E  + Y ++E     +
Sbjct: 373 DVAQKLRLNSANPVADAESIVAKAIRDGAIDATIDHKNGCMVSKETGDIYSTNEPQTAFN 432

Query: 548 SSI 556
           S I
Sbjct: 433 SRI 435

>PSD31_ARATH (Q9LNU4) Probable 26S proteasome non-ATPase regulatory subunit 3a|
           (26S proteasome subunit S3-a)
          Length = 488

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 44/180 (24%), Positives = 88/180 (48%), Gaps = 3/180 (1%)
 Frame = +2

Query: 26  LLHNAVTAPMSSLNAITVEAYKKYVLVSLIQSGQVPPFPKYTSSTAQRNLKNHAQIYVDV 205
           LL  A  AP+++L    ++  K  +LV L+  G++P    +T    Q+ ++   + Y ++
Sbjct: 263 LLQAARKAPIAALG-FRIQCNKWAILVRLLL-GEIPERSIFT----QKGMEKALRPYFEL 316

Query: 206 STCYGTGSYSDLETFIQSNAEAFQTDNNLGLVKQVLSSMYKRNIQRLTQTYLTLSLEDIA 385
           +     G      T  +   + F  D    L+ ++  ++ +  ++ ++ +Y  +SL D+A
Sbjct: 317 TNAVRIGDLELFRTVQEKFLDTFAQDRTHNLIVRLRHNVIRTGLRNISISYSRISLPDVA 376

Query: 386 SSVQLNTPK---EAEMHVLRMIEDGEIYATINQKDGMVSFNEDPEQYKSSEMVEHIDSSI 556
             ++LN+     +AE  V + I DG I ATI+ K+G +   E  + Y ++E     +S I
Sbjct: 377 KKLRLNSENPVADAESIVAKAIRDGAIDATIDHKNGCMVSKETGDIYSTNEPQTAFNSRI 436

>PSD3_ANOST (Q9U5Z8) Probable 26S proteasome non-ATPase regulatory subunit 3|
           (26S proteasome subunit S3) (Diphenol oxidase A2
           component) (DOX-A2)
          Length = 500

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 36/150 (24%), Positives = 74/150 (49%)
 Frame = +2

Query: 80  EAYKKYVLVSLIQSGQVPPFPKYTSSTAQRNLKNHAQIYVDVSTCYGTGSYSDLETFIQS 259
           +  +K V+V  +  G +P    +  +  +R+L  + Q+   V      G+       +++
Sbjct: 293 QTVQKLVIVVELLLGDIPERKVFRQAALRRSLGPYFQLTQAVRM----GNLQRFGEVLEN 348

Query: 260 NAEAFQTDNNLGLVKQVLSSMYKRNIQRLTQTYLTLSLEDIASSVQLNTPKEAEMHVLRM 439
             E F+ D+   L+ ++  ++ K  I+ +   Y  +S +DIA  + L++P++AE  V + 
Sbjct: 349 FGEQFRQDHTFTLIIRLRHNVIKTAIRSIGLAYSRISPQDIARKLGLDSPEDAEFIVAKA 408

Query: 440 IEDGEIYATINQKDGMVSFNEDPEQYKSSE 529
           I DG I AT++ + G +   E  + Y + E
Sbjct: 409 IRDGVIDATLDPEKGYMRTKESTDIYSTRE 438

>PSD3_ANOGA (O61470) Probable 26S proteasome non-ATPase regulatory subunit 3|
           (26S proteasome subunit S3) (Diphenol oxidase A2
           component) (DOX-A2)
          Length = 496

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 36/150 (24%), Positives = 73/150 (48%)
 Frame = +2

Query: 80  EAYKKYVLVSLIQSGQVPPFPKYTSSTAQRNLKNHAQIYVDVSTCYGTGSYSDLETFIQS 259
           +  +K V+V  +  G +P    +  +  +R+L  + Q+   V      G+       + +
Sbjct: 289 QTVQKLVIVVELLLGDIPERKVFRQAALRRSLGPYFQLTQAVRM----GNLQRFGEVLVN 344

Query: 260 NAEAFQTDNNLGLVKQVLSSMYKRNIQRLTQTYLTLSLEDIASSVQLNTPKEAEMHVLRM 439
             E F+ D+   L+ ++  ++ K  I+ +   Y  +S +DIA  + L++P++AE  V + 
Sbjct: 345 FGEQFRQDHTFTLIIRLRHNVIKTAIRSIGLAYSRISPQDIARKLGLDSPEDAEFIVAKA 404

Query: 440 IEDGEIYATINQKDGMVSFNEDPEQYKSSE 529
           I DG I AT++ + G +   E  + Y + E
Sbjct: 405 IRDGVIEATLDPEKGYMRSKESTDIYSTRE 434

>CSN3_CAEEL (Q9N425) COP9 signalosome complex subunit 3 (Signalosome subunit 3)|
          Length = 501

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 43/178 (24%), Positives = 85/178 (47%), Gaps = 3/178 (1%)
 Frame = +2

Query: 17  ALELLHNAVTAPMSSLNAITVEAYKKYVLVSLIQSGQVPPFPKYTSSTAQRNLKNHAQIY 196
           AL LL   V  P  S+    ++++KKYVL+SLI  G+V    +    +A R+ K  +  Y
Sbjct: 279 ALFLLEICVGMPAFSVQDQHLDSFKKYVLISLILKGKV-DVTENGDKSAIRHFKTKSPEY 337

Query: 197 ---VDVSTCYGTGSYSDLETFIQSNAEAFQTDNNLGLVKQVLSSMYKRNIQRLTQTYLTL 367
               ++     + ++S +E+ ++S  +  + D N  + K ++  M K+ I  LT+ + ++
Sbjct: 338 KQFSEIRFSRSSNTHSAVESLVKSAKDRLRKDGNTEIAKYLVVEMKKKTIMSLTRMFTSI 397

Query: 368 SLEDIASSVQLNTPKEAEMHVLRMIEDGEIYATINQKDGMVSFNEDPEQYKSSEMVEH 541
            + +I     L +  +    + +++E+  I   I   DG + F  +     S   VE+
Sbjct: 398 RISEIEELAFLKSRDQVTELIGQLVEEQRITVRI---DGDMVFWTELSPVPSKNDVEN 452

>RPN3_YEAST (P40016) 26S proteasome regulatory subunit RPN3|
          Length = 523

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 3/163 (1%)
 Frame = +2

Query: 80  EAYKKYVLVSLIQSGQVPPFPKYTSSTAQRNLKNHAQIYVDVSTCYGTGSYSDLETF--- 250
           ++ K +  + L+  G +P    +  S  Q++L  +  +   V         SDL+ F   
Sbjct: 312 QSNKLHCCIQLLM-GDIPELSFFHQSNMQKSLLPYYHLTKAVKL-------SDLKKFTST 363

Query: 251 IQSNAEAFQTDNNLGLVKQVLSSMYKRNIQRLTQTYLTLSLEDIASSVQLNTPKEAEMHV 430
           I    +    D+   L  ++ S++ K  I+ ++ TY  +SL DI   + L++ +  E  V
Sbjct: 364 ITKYKQLLLKDDTYQLCVRLRSNVIKTGIRIISLTYKKISLRDICLKLNLDSEQTVEYMV 423

Query: 431 LRMIEDGEIYATINQKDGMVSFNEDPEQYKSSEMVEHIDSSIQ 559
            R I DG I A IN +DG +   E    Y S +  +  D  I+
Sbjct: 424 SRAIRDGVIEAKINHEDGFIETTELLNIYDSEDPQQVFDERIK 466

>PSD3_DAUCA (Q06364) Probable 26S proteasome non-ATPase regulatory subunit 3|
           (26S proteasome subunit S3) (Nuclear antigen 21D7)
          Length = 489

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 42/179 (23%), Positives = 83/179 (46%), Gaps = 3/179 (1%)
 Frame = +2

Query: 29  LHNAVTAPMSSLNAITVEAYKKYVLVSLIQSGQVPPFPKYTSSTAQRNLKNHAQIYVDVS 208
           L  A  AP+++L    V+  K  V+V L+  G++P    +     Q+ ++   + Y  ++
Sbjct: 265 LQAARKAPVAALG-FRVQCNKWAVIVRLLL-GEIPERTVFM----QKGMEKALRPYFXLT 318

Query: 209 TCYGTGSYSDLETFIQSNAEAFQTDNNLGLVKQVLSSMYKRNIQRLTQTYLTLSLEDIAS 388
                G            A  F  D    L+ ++  ++ +  ++ ++ +Y  +SL D+A 
Sbjct: 319 NAVRIGDLELFRXVADKFASTFTADRTHNLIVRLRHNVIRTGLRNISISYSRISLVDVAR 378

Query: 389 SVQLNTPK---EAEMHVLRMIEDGEIYATINQKDGMVSFNEDPEQYKSSEMVEHIDSSI 556
            ++L++P    +AE  V + I DG I ATI+  +G +   E  + Y ++E     +S I
Sbjct: 379 KLRLDSPNPVADAESIVSKAIRDGAIDATIDHANGWMVSKETGDIYSTNEPQAAFNSRI 437

>PSD3_DROME (P25161) Probable 26S proteasome non-ATPase regulatory subunit 3|
           (26S proteasome subunit S3) (Diphenol oxidase A2
           component) (DOX-A2)
          Length = 494

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 32/150 (21%), Positives = 66/150 (44%)
 Frame = +2

Query: 80  EAYKKYVLVSLIQSGQVPPFPKYTSSTAQRNLKNHAQIYVDVSTCYGTGSYSDLETFIQS 259
           +  +K ++V  +  G +P    +     Q  L+     Y  ++     G+       +  
Sbjct: 287 QTVQKLIIVVELLLGNIPERVVFR----QAGLRQSLGAYFQLTQAVRLGNLKRFGDVVSQ 342

Query: 260 NAEAFQTDNNLGLVKQVLSSMYKRNIQRLTQTYLTLSLEDIASSVQLNTPKEAEMHVLRM 439
               FQ D+   L+ ++  ++ K  I+ +  +Y  +S +DIA  + L++ ++AE  V + 
Sbjct: 343 YGPKFQLDHTFTLIIRLRHNVIKTAIRSIGLSYSRISPQDIAKRLMLDSAEDAEFIVSKA 402

Query: 440 IEDGEIYATINQKDGMVSFNEDPEQYKSSE 529
           I DG I AT++     +   E  + Y + E
Sbjct: 403 IRDGVIEATLDPAQNFMRSKESTDIYSTRE 432

>CSN3_SCHPO (Q9UT51) COP9 signalosome complex subunit 3 (CSN complex subunit 3)|
           (SGN3)
          Length = 334

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 8/152 (5%)
 Frame = +2

Query: 50  PMSSLNAITVEAYKKYVLVSLIQSGQVPPFPKYTSSTAQRNLKNHAQIYVDVSTCYGTGS 229
           P ++L +   EAY  ++L+ +I +G+       TSS     LK H   Y +    Y    
Sbjct: 145 PTTTLTSFHEEAYYSFLLLYIITTGKKFQLDSATSSNV-LPLKRHMVPYEEFLDAY-LKD 202

Query: 230 YSDLETFIQSNAEAFQTDNNLGLVKQVLSSMYKRNIQRLTQTYLTLSLEDIASSVQLNTP 409
            + L T I+ +   F  DN+   +   L       +++  +T+ +L LE IA   QL   
Sbjct: 203 VNTLRTVIKEHWSRFLKDNSTAFILFALEVYPMHRLKKWRKTFSSLKLEYIAK--QLAIS 260

Query: 410 KEAEMHVLR--------MIEDGEIYATINQKD 481
           ++    +++         + +GEI+ T N  D
Sbjct: 261 QDVAKEIIQKFDNKTNFTVANGEIFLTFNALD 292

>Y166_RHOCA (O68025) Putative HTH-type transcriptional regulator rrf2-like|
          Length = 150

 Score = 36.2 bits (82), Expect = 0.084
 Identities = 23/72 (31%), Positives = 36/72 (50%)
 Frame = +2

Query: 365 LSLEDIASSVQLNTPKEAEMHVLRMIEDGEIYATINQKDGMVSFNEDPEQYKSSEMVEHI 544
           L++E+IA+  +  TPK    H+L  +    + A+I  + G  S  + P     SE+V  I
Sbjct: 28  LTIEEIAT--RSGTPKRFLEHILLDLRKAGVVASIRGRSGGYSLLKAPRDVSISELVRRI 85

Query: 545 DSSIQRLMALSK 580
           D  I  L  LS+
Sbjct: 86  DGPIAPLPCLSR 97

>CFPA_TREPA (Q56336) Cytoplasmic filament protein A|
          Length = 677

 Score = 32.7 bits (73), Expect = 0.93
 Identities = 22/91 (24%), Positives = 41/91 (45%)
 Frame = +2

Query: 290 LGLVKQVLSSMYKRNIQRLTQTYLTLSLEDIASSVQLNTPKEAEMHVLRMIEDGEIYATI 469
           +G +K+ L + + +N Q +   Y+  + +++   V+    +E EM VL      EI   +
Sbjct: 67  MGGLKEKLYNYFNQNYQNMFNRYMVTAEDEMLKKVRGFIDRE-EMKVLNRYTPKEIAILL 125

Query: 470 NQKDGMVSFNEDPEQYKSSEMVEHIDSSIQR 562
           ++  G   FN    +     M  H+   IQR
Sbjct: 126 DEVAGADKFNTGEIEKSMVNMYGHLQGHIQR 156

>C71BV_ARATH (Q9LIP6) Cytochrome P450 71B34 (EC 1.14.-.-)|
          Length = 500

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 7/134 (5%)
 Frame = +2

Query: 29  LHNAVTAPMSSLNAITVEAYKKYVLVSLIQSGQVPPFPKYTSSTAQRNLKNHAQIYVDVS 208
           LH     P  SL  ++    KKY  V L++ G+VP     +S TA++ LK H     D+ 
Sbjct: 44  LHQLGELPHQSLWKLS----KKYGPVMLLKLGRVPTVIVSSSETAKQALKIH-----DLH 94

Query: 209 TCYGTG-------SYSDLETFIQSNAEAFQTDNNLGLVKQVLSSMYKRNIQRLTQTYLTL 367
            C   G       SY+ L+       + ++    L  V+++ SS    +IQ +    +  
Sbjct: 95  CCSRPGFAGARELSYNYLDIAFSPYDDYWKEVRKLA-VQELFSSKQVHSIQPIKDEEVKK 153

Query: 368 SLEDIASSVQLNTP 409
            ++ I+ S    TP
Sbjct: 154 LIDSISESAAQKTP 167

>ERG3_CANGA (P50860) C-5 sterol desaturase (EC 1.3.3.-) (Sterol-C5-desaturase)|
           (Ergosterol delta 5,6 desaturase)
          Length = 364

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = -3

Query: 526 TTFILLRIFIKADHAILLVYRCIDLTIFNHPKYMHLSFFRGVKL 395
           T F LL   I A  + + V+   D TIFNHPKY+    +  +KL
Sbjct: 102 TVFGLLLYLITASLSYVFVF---DRTIFNHPKYLKNQMYLEIKL 142

>RFC5_NEUCR (Q8X082) Probable activator 1 subunit 5 (Replication factor C|
           subunit 5) (Replication factor C5)
          Length = 352

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 28/93 (30%), Positives = 40/93 (43%)
 Frame = +2

Query: 59  SLNAITVEAYKKYVLVSLIQSGQVPPFPKYTSSTAQRNLKNHAQIYVDVSTCYGTGSYSD 238
           SL+A+T        L SL QSG  P    Y  S A +  +    I   +   YG G    
Sbjct: 12  SLDALTYHTELSERLRSLAQSGDFPHLLVYGPSGAGKKTR----IVATLKELYGPGVEK- 66

Query: 239 LETFIQSNAEAFQTDNNLGLVKQVLSSMYKRNI 337
               I+ +A  FQT +N  L   +++S+Y   I
Sbjct: 67  ----IKIDARVFQTSSNRKLEFNIVASVYHLEI 95

>SSP5_STRGN (P16952) Agglutinin receptor precursor (SSP-5)|
          Length = 1500

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 11/126 (8%)
 Frame = +2

Query: 74  TVEAYKKYVLVSLIQSGQVPPFPKYTSSTAQRNLKNHAQIYVDVSTCYGTGS-------- 229
           T EAYKK V     ++ ++    K      Q++LK+H +    ++T   T          
Sbjct: 148 TTEAYKKEVAAHQAETDKINAENKAADDKYQKDLKSHQEEVEKINTANATAKAEYEAKLA 207

Query: 230 --YSDLETFIQSNAEAFQT-DNNLGLVKQVLSSMYKRNIQRLTQTYLTLSLEDIASSVQL 400
               DL T  ++N ++ Q   N L   +  L+ + K N +   + Y     E+ A +  L
Sbjct: 208 QYQKDLATVKKANEDSQQDYQNKLSAYQTELARVQKANAE-AKEAYEKAVKENTAKNEAL 266

Query: 401 NTPKEA 418
               EA
Sbjct: 267 KVENEA 272

>UBR2_YEAST (Q07963) Ubiquitin-protein ligase E3 UBR2 (EC 6.-.-.-)|
           (Ubiquitin-protein ligase E3 component N-recognin-1
           homolog)
          Length = 1872

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
 Frame = +2

Query: 377 DIASSVQ--LNTPKEAEMHVLRMIEDGEIYATINQKDGMVSFNEDPEQYKSSEMVEHI 544
           D+AS++   LNTP E  + + + +ED     T+ Q +     ++  ++++   +V H+
Sbjct: 283 DLASTITRILNTPVEYAISITKALEDSHDVVTVLQSENFFEIDQIAKEFQKENIVVHV 340

>RIF1_SCHPO (Q96UP3) Telomere length regulator protein rif1|
          Length = 1400

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
 Frame = -3

Query: 349 GQPLDVSLVH*REHLLHESKVVISLEGLCI*-LDECLQIRVATSAIARRHIDVNLSVIFQ 173
           G  L  +L     HLL   K  +S+  LC   LD C  I   +  I +  + V   ++ Q
Sbjct: 206 GPKLTKALAAQHLHLLSCQKCPLSIHPLCNRILDVCFNISFPSLVIGQERLAVLTKILSQ 265

Query: 172 IPLSSRRRVLGEW 134
            PL   RRV+ +W
Sbjct: 266 FPLEFSRRVV-DW 277

>MATA2_YARLI (O93958) Mating-type protein A2 (MATA2 transcription factor)|
          Length = 291

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 35/146 (23%), Positives = 55/146 (37%), Gaps = 6/146 (4%)
 Frame = +2

Query: 86  YKKYVLVSLIQSGQVPPFPKYTSSTAQRNLKNHAQI---YVDVSTCYGTG---SYSDLET 247
           Y +Y+   L +S + P   K  + + ++  K   ++    V V    G G   + S +  
Sbjct: 141 YPEYIPNKLPKSPKKPKVQKGATKSKKKGAKGKNKVTALQVLVGPTVGVGGRMTVSPMTA 200

Query: 248 FIQSNAEAFQTDNNLGLVKQVLSSMYKRNIQRLTQTYLTLSLEDIASSVQLNTPKEAEMH 427
           F  +N+     D N  L                T+ +L + L+DI    Q       E H
Sbjct: 201 FFSNNSHVTCYDPNFVL-------------DTPTREFLMMPLDDITLPSQGPRSDSQEQH 247

Query: 428 VLRMIEDGEIYATINQKDGMVSFNED 505
           V R   DG+ Y  I   D  VS  +D
Sbjct: 248 VPRQPPDGQDYFDILDIDDFVSPYDD 273

>C8AP2_HUMAN (Q9UKL3) CASP8-associated protein 2 (FLICE-associated huge protein)|
          Length = 1982

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 28/125 (22%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
 Frame = +2

Query: 254  QSNAEAFQTDNNLGLVKQVLSSMYKRNIQRLTQTYLTLSLEDIASSVQLNTPKEAEMHVL 433
            +++    QT+N     K+   S      ++  +   T SLE I   + + + ++  MH+L
Sbjct: 985  KTHVRIHQTNNKWN--KRPDKSSRSSKTEKKDKVMSTSSLEKIVPIIAVPSSEQEIMHML 1042

Query: 434  RMIED--GEIYATINQKDGMVSFNEDPEQ--YKSSEMVEHIDSSIQRLMALSKKLTSIDQ 601
            RMI     + Y     K  ++ F+   E      + +++H++     L  +SK +T++ +
Sbjct: 1043 RMIRKHVRKNYMKFKAKFSLIQFHRIIESAILSFTSLIKHLN-----LHKISKSVTTLQK 1097

Query: 602  NISCD 616
            N+ CD
Sbjct: 1098 NL-CD 1101

>PTN14_MOUSE (Q62130) Tyrosine-protein phosphatase non-receptor type 14 (EC|
           3.1.3.48) (Protein-tyrosine phosphatase PTP36)
          Length = 1189

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
 Frame = +2

Query: 11  PKALELLHNAVTAPMSSLNAITVEAYKKYVLVSLIQSGQVPPFPKYTSSTAQRNLKNHAQ 190
           P A  + H   T  ++++     + Y    ++        PP+P+   +T+  +L +H  
Sbjct: 528 PGASSISHTVSTPELANMQLQGAQHYSTAHMLKNYLFRPPPPYPRPRPATSTPDLASHRH 587

Query: 191 IYVDVSTCYGTGSYSDLET-FIQSNAEAFQTDNN 289
            YV       +GS  DL T  +Q + + FQ D++
Sbjct: 588 KYV-------SGSSPDLVTRKVQLSVKTFQEDSS 614

>TOR_DROME (P18475) Tyrosine-protein kinase receptor torso precursor (EC|
           2.7.10.1)
          Length = 923

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 17/65 (26%), Positives = 32/65 (49%)
 Frame = +2

Query: 227 SYSDLETFIQSNAEAFQTDNNLGLVKQVLSSMYKRNIQRLTQTYLTLSLEDIASSVQLNT 406
           S   L+ F++   +  Q  N +GL K +  ++  R   RL +  +   +EDI +S+    
Sbjct: 554 SLGSLQNFLREEWKFRQEQNAIGLKKNLEQNVDNRRFNRLPRNSIHDRIEDINNSMLSTV 613

Query: 407 PKEAE 421
            +E+E
Sbjct: 614 EEESE 618

>NH124_CAEEL (O16391) Nuclear hormone receptor family member nhr-124|
          Length = 376

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 19/67 (28%), Positives = 35/67 (52%)
 Frame = +2

Query: 5   EIPKALELLHNAVTAPMSSLNAITVEAYKKYVLVSLIQSGQVPPFPKYTSSTAQRNLKNH 184
           EIPK  E++ + +T+PM  L  + +    +Y+L+++I      P  +  S + Q  L  H
Sbjct: 248 EIPKCREIIMDLLTSPMKPLMELQI-TESEYLLLNMIVI--CNPAIQGMSPSGQDLLSRH 304

Query: 185 AQIYVDV 205
            Q+Y  +
Sbjct: 305 QQVYARI 311

>MELR_ECOLI (P0ACH8) Melibiose operon regulatory protein|
          Length = 302

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 33/136 (24%), Positives = 55/136 (40%), Gaps = 2/136 (1%)
 Frame = +2

Query: 119 SGQVPPFPKYTSSTAQRNLKNHAQIYVDVSTCYGTGSYSDLETFIQSNAEAFQTDNN--L 292
           SG  P     TS T + ++  HAQ YV     +   +Y    T I   AE  + + N  +
Sbjct: 167 SGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALT-INDVAEHVKLNANYAM 225

Query: 293 GLVKQVLSSMYKRNIQRLTQTYLTLSLEDIASSVQLNTPKEAEMHVLRMIEDGEIYATIN 472
           G+ ++V+    K+ I  +   ++   L D   S+ L+    A             Y+T  
Sbjct: 226 GIFQRVMQLTMKQYITAMRINHVRALLSDTDKSI-LDIALTAGFR-----SSSRFYSTFG 279

Query: 473 QKDGMVSFNEDPEQYK 520
           +  GM      P+QY+
Sbjct: 280 KYVGM-----SPQQYR 290

>MELR_ECOL6 (P0ACH9) Melibiose operon regulatory protein|
          Length = 302

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 33/136 (24%), Positives = 55/136 (40%), Gaps = 2/136 (1%)
 Frame = +2

Query: 119 SGQVPPFPKYTSSTAQRNLKNHAQIYVDVSTCYGTGSYSDLETFIQSNAEAFQTDNN--L 292
           SG  P     TS T + ++  HAQ YV     +   +Y    T I   AE  + + N  +
Sbjct: 167 SGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALT-INDVAEHVKLNANYAM 225

Query: 293 GLVKQVLSSMYKRNIQRLTQTYLTLSLEDIASSVQLNTPKEAEMHVLRMIEDGEIYATIN 472
           G+ ++V+    K+ I  +   ++   L D   S+ L+    A             Y+T  
Sbjct: 226 GIFQRVMQLTMKQYITAMRINHVRALLSDTDKSI-LDIALTAGFR-----SSSRFYSTFG 279

Query: 473 QKDGMVSFNEDPEQYK 520
           +  GM      P+QY+
Sbjct: 280 KYVGM-----SPQQYR 290


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,973,440
Number of Sequences: 219361
Number of extensions: 1621244
Number of successful extensions: 4644
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 4477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4639
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5938641176
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)