>NALP4_HUMAN (Q96MN2) NACHT-, LRR- and PYD-containing protein 4 (PYRIN-containing|
            APAF1-like protein 4) (PAAD and NACHT-containing protein
            2) (PYRIN and NACHT-containing protein 2) (Ribonuclease
            inhibitor 2)
          Length = 994

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +2

Query: 230  VVCTQTTHPQCLMKLQGRKHTDLDDE 307
            V+C    HP+C +++ G + TD D+E
Sbjct: 940  VLCEALRHPECALQVLGLRKTDFDEE 965

>JHD2B_MOUSE (Q6ZPY7) JmjC domain-containing histone demethylation protein 2B|
           (EC 1.14.11.-) (Jumonji domain-containing protein 1B)
          Length = 1562

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 10/56 (17%)
 Frame = -3

Query: 221 GTGRNQS-GMSA---------YLCAIEDESMTLHDLSINFFMECNSRPNGSKNFIS 84
           G+GR+QS G+ A         + C+   ES    DLS N F +C S+   S N++S
Sbjct: 287 GSGRSQSNGVLATDNKPLGFSFSCSSASESQKDSDLSKNLFFQCMSQNVPSTNYLS 342

>CLS_WIGBR (Q8D2I8) Cardiolipin synthetase (EC 2.7.8.-) (Cardiolipin synthase)|
           (CL synthase)
          Length = 495

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 9/55 (16%)
 Frame = -2

Query: 477 NVLHVENNLSRRKL--GPGCKQDHTRNYLLI-------LAVFPTPYLVPSSDAAH 340
           N++  +NN   + +  GPG  +      LL        + +  TPYLVPS D  H
Sbjct: 307 NIIKKDNNYKTQVIPSGPGVSEGVIHQVLLTAIYSAKKILIMTTPYLVPSDDILH 361


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,271,056
Number of Sequences: 219361
Number of extensions: 1760637
Number of successful extensions: 4194
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4194
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4200495993
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)