ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags26i13 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 831 bits (419), Expect = 0.0 Identities = 575/627 (91%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2547878 aagaagtcctggcaagctcggcacactggtatcaagattgttcagcagattgctattctt 2547937 Query: 62 atgggctgcgctgttctgcctcaccttaagaacctagttgagatcattgagcatggtcta 121 |||||||||||||||||||| || || ||| ||||||||||||||||||||||||||| Sbjct: 2547938 atgggctgcgctgttctgccacatctcaagtccctagttgagatcattgagcatggtctt 2547997 Query: 122 agcgatgagaaccagaaagtgcggacgatcacagctctctctcttgctgcacttgctgaa 181 || || |||||||||||||||||||| ||||| || || |||||||||||||||||||| Sbjct: 2547998 agtgacgagaaccagaaagtgcggacaatcactgccctttctcttgctgcacttgctgag 2548057 Query: 182 gctgctgcgccctatggtatagaaagttttgatagtgtcctgaaacctctctggaagggt 241 |||||||| || |||||||||||||||||||||| ||| |||| ||||| ||||||||| Sbjct: 2548058 gctgctgcaccatatggtatagaaagttttgatactgttttgaagcctctgtggaagggt 2548117 Query: 242 atcagatctcaccgtggaaaggtccttgctgccttcttgaaggctattggtttcatcatc 301 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 2548118 atcagatctcaccgtggaaaggttcttgctgccttcttgaaagctattggtttcatcatc 2548177 Query: 302 cctcttatggatgctctgtatgccagttactacacgaaggaggtgatgcaagtcctgatt 361 |||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 2548178 cctcttatggatgcgctgtatgccagttactacacgaaggaggtcatgcaaatcctgatt 2548237 Query: 362 agagagttccagtccccagacgaagagatgaagaagattgtcctgaaggttgttaagcag 421 || ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 2548238 agggagttccagtcaccagatgaagagatgaagaagattgtcctgaaggttgttaaacag 2548297 Query: 422 tgtgtcagtacagagggtgtggaggctgattatatccggagtgacatccttccagacttc 481 |||||||||||||||||||| ||||||||||||||||||| |||||||||||| || || Sbjct: 2548298 tgtgtcagtacagagggtgtagaggctgattatatccggaatgacatccttcctgagttt 2548357 Query: 482 ttcaaacacttctgggttaggagaatggccctagatcgtaggaactataagcaacttgtg 541 ||| ||||||||||||||||||||||| || || || |||||||||||||| |||||| Sbjct: 2548358 ttccgtcacttctgggttaggagaatggctctggaccgcaggaactataagcagcttgtg 2548417 Query: 542 gaaacaacagtagagatggcaaacaaggtgggagttactggtatcgttgggaagattgtt 601 |||||||| |||||||||||||| ||||| |||||| ||| ||| ||||||| ||||||| Sbjct: 2548418 gaaacaacggtagagatggcaaataaggttggagttgctgatattgttgggaggattgtt 2548477 Query: 602 gaggatctgaaagatgaaagtgagcct 628 |||||||||||||||||||| |||||| Sbjct: 2548478 gaggatctgaaagatgaaagcgagcct 2548504 Score = 815 bits (411), Expect = 0.0 Identities = 573/627 (91%) Strand = Plus / Minus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2602353 aagaagtcctggcaagctcggcacactggtatcaagattgttcagcagattgctattctt 2602294 Query: 62 atgggctgcgctgttctgcctcaccttaagaacctagttgagatcattgagcatggtcta 121 |||||||||||||||||||| || || ||| |||||| |||||||||||||||||||| Sbjct: 2602293 atgggctgcgctgttctgccacatctcaagtccctagtcgagatcattgagcatggtctt 2602234 Query: 122 agcgatgagaaccagaaagtgcggacgatcacagctctctctcttgctgcacttgctgaa 181 || ||||||||||||||||||||||| ||||| || || ||||||||| |||||||||| Sbjct: 2602233 agtgatgagaaccagaaagtgcggacaatcactgccctttctcttgctacacttgctgag 2602174 Query: 182 gctgctgcgccctatggtatagaaagttttgatagtgtcctgaaacctctctggaagggt 241 |||||||| || |||||||||||||||||||||| ||| |||| ||||| ||||||||| Sbjct: 2602173 gctgctgcaccatatggtatagaaagttttgatactgttttgaagcctctgtggaagggt 2602114 Query: 242 atcagatctcaccgtggaaaggtccttgctgccttcttgaaggctattggtttcatcatc 301 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 2602113 atcagatctcaccgtggaaaggttcttgctgccttcttgaaagctattggtttcatcatc 2602054 Query: 302 cctcttatggatgctctgtatgccagttactacacgaaggaggtgatgcaagtcctgatt 361 |||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 2602053 cctcttatggatgcgctgtatgccagttactacacgaaggaggtcatgcaaatcctgata 2601994 Query: 362 agagagttccagtccccagacgaagagatgaagaagattgtcctgaaggttgttaagcag 421 || ||||||||||| ||||| ||||| ||||||||||||||||||||||||||||| ||| Sbjct: 2601993 agggagttccagtcaccagatgaagaaatgaagaagattgtcctgaaggttgttaaacag 2601934 Query: 422 tgtgtcagtacagagggtgtggaggctgattatatccggagtgacatccttccagacttc 481 |||||||||||||||||||| ||||||||||||||||||| |||||||||||| || || Sbjct: 2601933 tgtgtcagtacagagggtgtagaggctgattatatccggaatgacatccttcctgagttt 2601874 Query: 482 ttcaaacacttctgggttaggagaatggccctagatcgtaggaactataagcaacttgtg 541 ||| ||||||||||||||||||||||| || || || |||||||||||||| |||||| Sbjct: 2601873 ttccgtcacttctgggttaggagaatggctctggaccgcaggaactataagcagcttgtg 2601814 Query: 542 gaaacaacagtagagatggcaaacaaggtgggagttactggtatcgttgggaagattgtt 601 |||||||| |||||||||||||| ||||| |||||| ||| ||| ||||||| ||||||| Sbjct: 2601813 gaaacaactgtagagatggcaaataaggttggagttgctgatattgttgggaggattgtt 2601754 Query: 602 gaggatctgaaagatgaaagtgagcct 628 ||||||||||||||||||||||||||| Sbjct: 2601753 gaggatctgaaagatgaaagtgagcct 2601727 Score = 745 bits (376), Expect = 0.0 Identities = 559/620 (90%) Strand = Plus / Minus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2321407 aagaagtcttggcaagctcggcacactggtatcaagattgttcagcagattgctattctt 2321348 Query: 62 atgggctgcgctgttctgcctcaccttaagaacctagttgagatcattgagcatggtcta 121 |||||||||||||||||||| || || || | |||| |||||||||||||||||||| Sbjct: 2321347 atgggctgcgctgttctgccacatctcgagtccgtagtcgagatcattgagcatggtctt 2321288 Query: 122 agcgatgagaaccagaaagtgcggacgatcacagctctctctcttgctgcacttgctgaa 181 || || ||||||||||||||| |||| ||||| || || |||||||||||||||||||| Sbjct: 2321287 agtgacgagaaccagaaagtgaggacaatcactgccctttctcttgctgcacttgctgag 2321228 Query: 182 gctgctgcgccctatggtatagaaagttttgatagtgtcctgaaacctctctggaagggt 241 |||||||| || |||||||||||||||||||||| ||| |||| ||||| ||||||||| Sbjct: 2321227 gctgctgcaccatatggtatagaaagttttgatactgttttgaagcctctgtggaagggt 2321168 Query: 242 atcagatctcaccgtggaaaggtccttgctgccttcttgaaggctattggtttcatcatc 301 ||||||||| ||||||||||||| ||||||||||||||||| || |||||||| |||||| Sbjct: 2321167 atcagatctaaccgtggaaaggttcttgctgccttcttgaaagcaattggttttatcatc 2321108 Query: 302 cctcttatggatgctctgtatgccagttactacacgaaggaggtgatgcaagtcctgatt 361 |||||||||||||| |||||||||||||||||||| |||||||| |||||| |||||||| Sbjct: 2321107 cctcttatggatgcgctgtatgccagttactacacaaaggaggtcatgcaaatcctgatt 2321048 Query: 362 agagagttccagtccccagacgaagagatgaagaagattgtcctgaaggttgttaagcag 421 || ||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| ||| Sbjct: 2321047 agggagttccagtcaccagatgaagagatgaaaaagattgtcctgaaggttgttaaacag 2320988 Query: 422 tgtgtcagtacagagggtgtggaggctgattatatccggagtgacatccttccagacttc 481 |||||||||||||||||||| ||||||||||||||| ||| |||||||||||| || || Sbjct: 2320987 tgtgtcagtacagagggtgtagaggctgattatatctggaatgacatccttcctgaattt 2320928 Query: 482 ttcaaacacttctgggttaggagaatggccctagatcgtaggaactataagcaacttgtg 541 ||| | ||||||||||||||||||||||| || || || |||||||||||||| |||||| Sbjct: 2320927 ttccatcacttctgggttaggagaatggctctggaccgcaggaactataagcagcttgtg 2320868 Query: 542 gaaacaacagtagagatggcaaacaaggtgggagttactggtatcgttgggaagattgtt 601 |||||||| |||||||||||||| ||||| |||||| ||| ||| ||||||| ||||||| Sbjct: 2320867 gaaacaacggtagagatggcaaataaggttggagttgctgatattgttgggaggattgtt 2320808 Query: 602 gaggatctgaaagatgaaag 621 |||||||||||||||||||| Sbjct: 2320807 gaggatctgaaagatgaaag 2320788 Score = 634 bits (320), Expect = e-179 Identities = 545/620 (87%) Strand = Plus / Plus Query: 5 aagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctcatg 64 ||||| ||||| ||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 16551321 aagtcttggcaggctcggcacactggtattaagattgttcagcagattgctattctcatg 16551380 Query: 65 ggctgcgctgttctgcctcaccttaagaacctagttgagatcattgagcatggtctaagc 124 ||||| ||||||||||| ||||| | | | ||||||| ||||||||||||||||| || Sbjct: 16551381 ggctgtgctgttctgccacacctcaggtccttagttgatatcattgagcatggtctgagt 16551440 Query: 125 gatgagaaccagaaagtgcggacgatcacagctctctctcttgctgcacttgctgaagct 184 ||||| ||||||||||| ||||| ||||| || || |||||||||||||||||||| ||| Sbjct: 16551441 gatgaaaaccagaaagtacggacaatcaccgcactgtctcttgctgcacttgctgaggct 16551500 Query: 185 gctgcgccctatggtatagaaagttttgatagtgtcctgaaacctctctggaagggtatc 244 || || ||||||||||||||||||||||||| || ||| ||| | |||||||||| | Sbjct: 16551501 gccgcaccctatggtatagaaagttttgatacggtgttgaggcctttgtggaagggtacc 16551560 Query: 245 agatctcaccgtggaaaggtccttgctgccttcttgaaggctattggtttcatcatccct 304 | ||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 16551561 aaatctcaccgtggaaaggtccttgctgctttcttgaaagccgttggtttcatcatccct 16551620 Query: 305 cttatggatgctctgtatgccagttactacacgaaggaggtgatgcaagtcctgattaga 364 |||||||||| | ||||||||||||||||| | || |||||| | | |||||||||| Sbjct: 16551621 cttatggatgttgaatatgccagttactacaccaggggggtgattccaatcctgattagg 16551680 Query: 365 gagttccagtccccagacgaagagatgaagaagattgtcctgaaggttgttaagcagtgt 424 ||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| || ||| Sbjct: 16551681 gagttccagtcaccagatgaagagatgaaaaagattgtcctgaaggttgttaaacaatgt 16551740 Query: 425 gtcagtacagagggtgtggaggctgattatatccggagtgacatccttccagacttcttc 484 ||||||||||||||||| |||||||| |||||||| | || |||||||||||| |||||| Sbjct: 16551741 gtcagtacagagggtgtagaggctgactatatccgtaatggcatccttccagagttcttc 16551800 Query: 485 aaacacttctgggttaggagaatggccctagatcgtaggaactataagcaacttgtggaa 544 ||||| ||| | ||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 16551801 cgtcacttttggataaggagaatggctctagatcgtaggaactataaacaacttgtggaa 16551860 Query: 545 acaacagtagagatggcaaacaaggtgggagttactggtatcgttgggaagattgttgag 604 |||||||| ||||| ||||||||||| |||||| ||| |||||||||| |||||||||| Sbjct: 16551861 acaacagtggagattgcaaacaaggttggagttgctgacatcgttgggaggattgttgag 16551920 Query: 605 gatctgaaagatgaaagtga 624 ||||| |||||||||||||| Sbjct: 16551921 gatctcaaagatgaaagtga 16551940
>dbj|AP005649.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0064G16 Length = 166453 Score = 831 bits (419), Expect = 0.0 Identities = 575/627 (91%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 163799 aagaagtcctggcaagctcggcacactggtatcaagattgttcagcagattgctattctt 163858 Query: 62 atgggctgcgctgttctgcctcaccttaagaacctagttgagatcattgagcatggtcta 121 |||||||||||||||||||| || || ||| ||||||||||||||||||||||||||| Sbjct: 163859 atgggctgcgctgttctgccacatctcaagtccctagttgagatcattgagcatggtctt 163918 Query: 122 agcgatgagaaccagaaagtgcggacgatcacagctctctctcttgctgcacttgctgaa 181 || || |||||||||||||||||||| ||||| || || |||||||||||||||||||| Sbjct: 163919 agtgacgagaaccagaaagtgcggacaatcactgccctttctcttgctgcacttgctgag 163978 Query: 182 gctgctgcgccctatggtatagaaagttttgatagtgtcctgaaacctctctggaagggt 241 |||||||| || |||||||||||||||||||||| ||| |||| ||||| ||||||||| Sbjct: 163979 gctgctgcaccatatggtatagaaagttttgatactgttttgaagcctctgtggaagggt 164038 Query: 242 atcagatctcaccgtggaaaggtccttgctgccttcttgaaggctattggtttcatcatc 301 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 164039 atcagatctcaccgtggaaaggttcttgctgccttcttgaaagctattggtttcatcatc 164098 Query: 302 cctcttatggatgctctgtatgccagttactacacgaaggaggtgatgcaagtcctgatt 361 |||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 164099 cctcttatggatgcgctgtatgccagttactacacgaaggaggtcatgcaaatcctgatt 164158 Query: 362 agagagttccagtccccagacgaagagatgaagaagattgtcctgaaggttgttaagcag 421 || ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 164159 agggagttccagtcaccagatgaagagatgaagaagattgtcctgaaggttgttaaacag 164218 Query: 422 tgtgtcagtacagagggtgtggaggctgattatatccggagtgacatccttccagacttc 481 |||||||||||||||||||| ||||||||||||||||||| |||||||||||| || || Sbjct: 164219 tgtgtcagtacagagggtgtagaggctgattatatccggaatgacatccttcctgagttt 164278 Query: 482 ttcaaacacttctgggttaggagaatggccctagatcgtaggaactataagcaacttgtg 541 ||| ||||||||||||||||||||||| || || || |||||||||||||| |||||| Sbjct: 164279 ttccgtcacttctgggttaggagaatggctctggaccgcaggaactataagcagcttgtg 164338 Query: 542 gaaacaacagtagagatggcaaacaaggtgggagttactggtatcgttgggaagattgtt 601 |||||||| |||||||||||||| ||||| |||||| ||| ||| ||||||| ||||||| Sbjct: 164339 gaaacaacggtagagatggcaaataaggttggagttgctgatattgttgggaggattgtt 164398 Query: 602 gaggatctgaaagatgaaagtgagcct 628 |||||||||||||||||||| |||||| Sbjct: 164399 gaggatctgaaagatgaaagcgagcct 164425
>dbj|AP005288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_C03 Length = 103297 Score = 831 bits (419), Expect = 0.0 Identities = 575/627 (91%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 26661 aagaagtcctggcaagctcggcacactggtatcaagattgttcagcagattgctattctt 26720 Query: 62 atgggctgcgctgttctgcctcaccttaagaacctagttgagatcattgagcatggtcta 121 |||||||||||||||||||| || || ||| ||||||||||||||||||||||||||| Sbjct: 26721 atgggctgcgctgttctgccacatctcaagtccctagttgagatcattgagcatggtctt 26780 Query: 122 agcgatgagaaccagaaagtgcggacgatcacagctctctctcttgctgcacttgctgaa 181 || || |||||||||||||||||||| ||||| || || |||||||||||||||||||| Sbjct: 26781 agtgacgagaaccagaaagtgcggacaatcactgccctttctcttgctgcacttgctgag 26840 Query: 182 gctgctgcgccctatggtatagaaagttttgatagtgtcctgaaacctctctggaagggt 241 |||||||| || |||||||||||||||||||||| ||| |||| ||||| ||||||||| Sbjct: 26841 gctgctgcaccatatggtatagaaagttttgatactgttttgaagcctctgtggaagggt 26900 Query: 242 atcagatctcaccgtggaaaggtccttgctgccttcttgaaggctattggtttcatcatc 301 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 26901 atcagatctcaccgtggaaaggttcttgctgccttcttgaaagctattggtttcatcatc 26960 Query: 302 cctcttatggatgctctgtatgccagttactacacgaaggaggtgatgcaagtcctgatt 361 |||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 26961 cctcttatggatgcgctgtatgccagttactacacgaaggaggtcatgcaaatcctgatt 27020 Query: 362 agagagttccagtccccagacgaagagatgaagaagattgtcctgaaggttgttaagcag 421 || ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 27021 agggagttccagtcaccagatgaagagatgaagaagattgtcctgaaggttgttaaacag 27080 Query: 422 tgtgtcagtacagagggtgtggaggctgattatatccggagtgacatccttccagacttc 481 |||||||||||||||||||| ||||||||||||||||||| |||||||||||| || || Sbjct: 27081 tgtgtcagtacagagggtgtagaggctgattatatccggaatgacatccttcctgagttt 27140 Query: 482 ttcaaacacttctgggttaggagaatggccctagatcgtaggaactataagcaacttgtg 541 ||| ||||||||||||||||||||||| || || || |||||||||||||| |||||| Sbjct: 27141 ttccgtcacttctgggttaggagaatggctctggaccgcaggaactataagcagcttgtg 27200 Query: 542 gaaacaacagtagagatggcaaacaaggtgggagttactggtatcgttgggaagattgtt 601 |||||||| |||||||||||||| ||||| |||||| ||| ||| ||||||| ||||||| Sbjct: 27201 gaaacaacggtagagatggcaaataaggttggagttgctgatattgttgggaggattgtt 27260 Query: 602 gaggatctgaaagatgaaagtgagcct 628 |||||||||||||||||||| |||||| Sbjct: 27261 gaggatctgaaagatgaaagcgagcct 27287 Score = 815 bits (411), Expect = 0.0 Identities = 573/627 (91%) Strand = Plus / Minus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 81136 aagaagtcctggcaagctcggcacactggtatcaagattgttcagcagattgctattctt 81077 Query: 62 atgggctgcgctgttctgcctcaccttaagaacctagttgagatcattgagcatggtcta 121 |||||||||||||||||||| || || ||| |||||| |||||||||||||||||||| Sbjct: 81076 atgggctgcgctgttctgccacatctcaagtccctagtcgagatcattgagcatggtctt 81017 Query: 122 agcgatgagaaccagaaagtgcggacgatcacagctctctctcttgctgcacttgctgaa 181 || ||||||||||||||||||||||| ||||| || || ||||||||| |||||||||| Sbjct: 81016 agtgatgagaaccagaaagtgcggacaatcactgccctttctcttgctacacttgctgag 80957 Query: 182 gctgctgcgccctatggtatagaaagttttgatagtgtcctgaaacctctctggaagggt 241 |||||||| || |||||||||||||||||||||| ||| |||| ||||| ||||||||| Sbjct: 80956 gctgctgcaccatatggtatagaaagttttgatactgttttgaagcctctgtggaagggt 80897 Query: 242 atcagatctcaccgtggaaaggtccttgctgccttcttgaaggctattggtttcatcatc 301 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 80896 atcagatctcaccgtggaaaggttcttgctgccttcttgaaagctattggtttcatcatc 80837 Query: 302 cctcttatggatgctctgtatgccagttactacacgaaggaggtgatgcaagtcctgatt 361 |||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 80836 cctcttatggatgcgctgtatgccagttactacacgaaggaggtcatgcaaatcctgata 80777 Query: 362 agagagttccagtccccagacgaagagatgaagaagattgtcctgaaggttgttaagcag 421 || ||||||||||| ||||| ||||| ||||||||||||||||||||||||||||| ||| Sbjct: 80776 agggagttccagtcaccagatgaagaaatgaagaagattgtcctgaaggttgttaaacag 80717 Query: 422 tgtgtcagtacagagggtgtggaggctgattatatccggagtgacatccttccagacttc 481 |||||||||||||||||||| ||||||||||||||||||| |||||||||||| || || Sbjct: 80716 tgtgtcagtacagagggtgtagaggctgattatatccggaatgacatccttcctgagttt 80657 Query: 482 ttcaaacacttctgggttaggagaatggccctagatcgtaggaactataagcaacttgtg 541 ||| ||||||||||||||||||||||| || || || |||||||||||||| |||||| Sbjct: 80656 ttccgtcacttctgggttaggagaatggctctggaccgcaggaactataagcagcttgtg 80597 Query: 542 gaaacaacagtagagatggcaaacaaggtgggagttactggtatcgttgggaagattgtt 601 |||||||| |||||||||||||| ||||| |||||| ||| ||| ||||||| ||||||| Sbjct: 80596 gaaacaactgtagagatggcaaataaggttggagttgctgatattgttgggaggattgtt 80537 Query: 602 gaggatctgaaagatgaaagtgagcct 628 ||||||||||||||||||||||||||| Sbjct: 80536 gaggatctgaaagatgaaagtgagcct 80510
>dbj|AP005191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0479D12 Length = 148362 Score = 815 bits (411), Expect = 0.0 Identities = 573/627 (91%) Strand = Plus / Minus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4575 aagaagtcctggcaagctcggcacactggtatcaagattgttcagcagattgctattctt 4516 Query: 62 atgggctgcgctgttctgcctcaccttaagaacctagttgagatcattgagcatggtcta 121 |||||||||||||||||||| || || ||| |||||| |||||||||||||||||||| Sbjct: 4515 atgggctgcgctgttctgccacatctcaagtccctagtcgagatcattgagcatggtctt 4456 Query: 122 agcgatgagaaccagaaagtgcggacgatcacagctctctctcttgctgcacttgctgaa 181 || ||||||||||||||||||||||| ||||| || || ||||||||| |||||||||| Sbjct: 4455 agtgatgagaaccagaaagtgcggacaatcactgccctttctcttgctacacttgctgag 4396 Query: 182 gctgctgcgccctatggtatagaaagttttgatagtgtcctgaaacctctctggaagggt 241 |||||||| || |||||||||||||||||||||| ||| |||| ||||| ||||||||| Sbjct: 4395 gctgctgcaccatatggtatagaaagttttgatactgttttgaagcctctgtggaagggt 4336 Query: 242 atcagatctcaccgtggaaaggtccttgctgccttcttgaaggctattggtttcatcatc 301 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 4335 atcagatctcaccgtggaaaggttcttgctgccttcttgaaagctattggtttcatcatc 4276 Query: 302 cctcttatggatgctctgtatgccagttactacacgaaggaggtgatgcaagtcctgatt 361 |||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 4275 cctcttatggatgcgctgtatgccagttactacacgaaggaggtcatgcaaatcctgata 4216 Query: 362 agagagttccagtccccagacgaagagatgaagaagattgtcctgaaggttgttaagcag 421 || ||||||||||| ||||| ||||| ||||||||||||||||||||||||||||| ||| Sbjct: 4215 agggagttccagtcaccagatgaagaaatgaagaagattgtcctgaaggttgttaaacag 4156 Query: 422 tgtgtcagtacagagggtgtggaggctgattatatccggagtgacatccttccagacttc 481 |||||||||||||||||||| ||||||||||||||||||| |||||||||||| || || Sbjct: 4155 tgtgtcagtacagagggtgtagaggctgattatatccggaatgacatccttcctgagttt 4096 Query: 482 ttcaaacacttctgggttaggagaatggccctagatcgtaggaactataagcaacttgtg 541 ||| ||||||||||||||||||||||| || || || |||||||||||||| |||||| Sbjct: 4095 ttccgtcacttctgggttaggagaatggctctggaccgcaggaactataagcagcttgtg 4036 Query: 542 gaaacaacagtagagatggcaaacaaggtgggagttactggtatcgttgggaagattgtt 601 |||||||| |||||||||||||| ||||| |||||| ||| ||| ||||||| ||||||| Sbjct: 4035 gaaacaactgtagagatggcaaataaggttggagttgctgatattgttgggaggattgtt 3976 Query: 602 gaggatctgaaagatgaaagtgagcct 628 ||||||||||||||||||||||||||| Sbjct: 3975 gaggatctgaaagatgaaagtgagcct 3949
>dbj|AP005776.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0018G11 Length = 121084 Score = 745 bits (376), Expect = 0.0 Identities = 559/620 (90%) Strand = Plus / Minus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 57484 aagaagtcttggcaagctcggcacactggtatcaagattgttcagcagattgctattctt 57425 Query: 62 atgggctgcgctgttctgcctcaccttaagaacctagttgagatcattgagcatggtcta 121 |||||||||||||||||||| || || || | |||| |||||||||||||||||||| Sbjct: 57424 atgggctgcgctgttctgccacatctcgagtccgtagtcgagatcattgagcatggtctt 57365 Query: 122 agcgatgagaaccagaaagtgcggacgatcacagctctctctcttgctgcacttgctgaa 181 || || ||||||||||||||| |||| ||||| || || |||||||||||||||||||| Sbjct: 57364 agtgacgagaaccagaaagtgaggacaatcactgccctttctcttgctgcacttgctgag 57305 Query: 182 gctgctgcgccctatggtatagaaagttttgatagtgtcctgaaacctctctggaagggt 241 |||||||| || |||||||||||||||||||||| ||| |||| ||||| ||||||||| Sbjct: 57304 gctgctgcaccatatggtatagaaagttttgatactgttttgaagcctctgtggaagggt 57245 Query: 242 atcagatctcaccgtggaaaggtccttgctgccttcttgaaggctattggtttcatcatc 301 ||||||||| ||||||||||||| ||||||||||||||||| || |||||||| |||||| Sbjct: 57244 atcagatctaaccgtggaaaggttcttgctgccttcttgaaagcaattggttttatcatc 57185 Query: 302 cctcttatggatgctctgtatgccagttactacacgaaggaggtgatgcaagtcctgatt 361 |||||||||||||| |||||||||||||||||||| |||||||| |||||| |||||||| Sbjct: 57184 cctcttatggatgcgctgtatgccagttactacacaaaggaggtcatgcaaatcctgatt 57125 Query: 362 agagagttccagtccccagacgaagagatgaagaagattgtcctgaaggttgttaagcag 421 || ||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| ||| Sbjct: 57124 agggagttccagtcaccagatgaagagatgaaaaagattgtcctgaaggttgttaaacag 57065 Query: 422 tgtgtcagtacagagggtgtggaggctgattatatccggagtgacatccttccagacttc 481 |||||||||||||||||||| ||||||||||||||| ||| |||||||||||| || || Sbjct: 57064 tgtgtcagtacagagggtgtagaggctgattatatctggaatgacatccttcctgaattt 57005 Query: 482 ttcaaacacttctgggttaggagaatggccctagatcgtaggaactataagcaacttgtg 541 ||| | ||||||||||||||||||||||| || || || |||||||||||||| |||||| Sbjct: 57004 ttccatcacttctgggttaggagaatggctctggaccgcaggaactataagcagcttgtg 56945 Query: 542 gaaacaacagtagagatggcaaacaaggtgggagttactggtatcgttgggaagattgtt 601 |||||||| |||||||||||||| ||||| |||||| ||| ||| ||||||| ||||||| Sbjct: 56944 gaaacaacggtagagatggcaaataaggttggagttgctgatattgttgggaggattgtt 56885 Query: 602 gaggatctgaaagatgaaag 621 |||||||||||||||||||| Sbjct: 56884 gaggatctgaaagatgaaag 56865
>dbj|AP005721.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_E07 Length = 113187 Score = 745 bits (376), Expect = 0.0 Identities = 559/620 (90%) Strand = Plus / Minus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 108356 aagaagtcttggcaagctcggcacactggtatcaagattgttcagcagattgctattctt 108297 Query: 62 atgggctgcgctgttctgcctcaccttaagaacctagttgagatcattgagcatggtcta 121 |||||||||||||||||||| || || || | |||| |||||||||||||||||||| Sbjct: 108296 atgggctgcgctgttctgccacatctcgagtccgtagtcgagatcattgagcatggtctt 108237 Query: 122 agcgatgagaaccagaaagtgcggacgatcacagctctctctcttgctgcacttgctgaa 181 || || ||||||||||||||| |||| ||||| || || |||||||||||||||||||| Sbjct: 108236 agtgacgagaaccagaaagtgaggacaatcactgccctttctcttgctgcacttgctgag 108177 Query: 182 gctgctgcgccctatggtatagaaagttttgatagtgtcctgaaacctctctggaagggt 241 |||||||| || |||||||||||||||||||||| ||| |||| ||||| ||||||||| Sbjct: 108176 gctgctgcaccatatggtatagaaagttttgatactgttttgaagcctctgtggaagggt 108117 Query: 242 atcagatctcaccgtggaaaggtccttgctgccttcttgaaggctattggtttcatcatc 301 ||||||||| ||||||||||||| ||||||||||||||||| || |||||||| |||||| Sbjct: 108116 atcagatctaaccgtggaaaggttcttgctgccttcttgaaagcaattggttttatcatc 108057 Query: 302 cctcttatggatgctctgtatgccagttactacacgaaggaggtgatgcaagtcctgatt 361 |||||||||||||| |||||||||||||||||||| |||||||| |||||| |||||||| Sbjct: 108056 cctcttatggatgcgctgtatgccagttactacacaaaggaggtcatgcaaatcctgatt 107997 Query: 362 agagagttccagtccccagacgaagagatgaagaagattgtcctgaaggttgttaagcag 421 || ||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| ||| Sbjct: 107996 agggagttccagtcaccagatgaagagatgaaaaagattgtcctgaaggttgttaaacag 107937 Query: 422 tgtgtcagtacagagggtgtggaggctgattatatccggagtgacatccttccagacttc 481 |||||||||||||||||||| ||||||||||||||| ||| |||||||||||| || || Sbjct: 107936 tgtgtcagtacagagggtgtagaggctgattatatctggaatgacatccttcctgaattt 107877 Query: 482 ttcaaacacttctgggttaggagaatggccctagatcgtaggaactataagcaacttgtg 541 ||| | ||||||||||||||||||||||| || || || |||||||||||||| |||||| Sbjct: 107876 ttccatcacttctgggttaggagaatggctctggaccgcaggaactataagcagcttgtg 107817 Query: 542 gaaacaacagtagagatggcaaacaaggtgggagttactggtatcgttgggaagattgtt 601 |||||||| |||||||||||||| ||||| |||||| ||| ||| ||||||| ||||||| Sbjct: 107816 gaaacaacggtagagatggcaaataaggttggagttgctgatattgttgggaggattgtt 107757 Query: 602 gaggatctgaaagatgaaag 621 |||||||||||||||||||| Sbjct: 107756 gaggatctgaaagatgaaag 107737
>dbj|AK067944.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123M24, full insert sequence Length = 4241 Score = 737 bits (372), Expect = 0.0 Identities = 558/620 (90%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1932 aagaagtcttggcaagctcggcacactggtatcaagattgttcagcagattgctattctt 1991 Query: 62 atgggctgcgctgttctgcctcaccttaagaacctagttgagatcattgagcatggtcta 121 |||||||||||||||||||| || || || | |||| |||||||||||||||||||| Sbjct: 1992 atgggctgcgctgttctgccacatctcgagtccgtagtcgagatcattgagcatggtctt 2051 Query: 122 agcgatgagaaccagaaagtgcggacgatcacagctctctctcttgctgcacttgctgaa 181 || || ||||||||||||||| |||| ||||| || || |||||||||||||||||||| Sbjct: 2052 agtgacgagaaccagaaagtgaggacaatcactgccctttctcttgctgcacttgctgag 2111 Query: 182 gctgctgcgccctatggtatagaaagttttgatagtgtcctgaaacctctctggaagggt 241 |||||||| || |||||||||||||||||||||| ||| |||| ||||| ||||||||| Sbjct: 2112 gctgctgcaccatatggtatagaaagttttgatactgttttgaagcctctgtggaagggt 2171 Query: 242 atcagatctcaccgtggaaaggtccttgctgccttcttgaaggctattggtttcatcatc 301 ||||||||| ||||||||||||| ||||||||||||||||| || |||||||| |||||| Sbjct: 2172 atcagatctaaccgtggaaaggttcttgctgccttcttgaaagcaattggttttatcatc 2231 Query: 302 cctcttatggatgctctgtatgccagttactacacgaaggaggtgatgcaagtcctgatt 361 | ||||||||||| |||||||||||||||||||| |||||||| |||||| |||||||| Sbjct: 2232 cagcttatggatgcgctgtatgccagttactacacaaaggaggtcatgcaaatcctgatt 2291 Query: 362 agagagttccagtccccagacgaagagatgaagaagattgtcctgaaggttgttaagcag 421 || ||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| ||| Sbjct: 2292 agggagttccagtcaccagatgaagagatgaaaaagattgtcctgaaggttgttaaacag 2351 Query: 422 tgtgtcagtacagagggtgtggaggctgattatatccggagtgacatccttccagacttc 481 |||||||||||||||||||| ||||||||||||||| ||| |||||||||||| || || Sbjct: 2352 tgtgtcagtacagagggtgtagaggctgattatatctggaatgacatccttcctgaattt 2411 Query: 482 ttcaaacacttctgggttaggagaatggccctagatcgtaggaactataagcaacttgtg 541 ||| | ||||||||||||||||||||||| || || || |||||||||||||| |||||| Sbjct: 2412 ttccatcacttctgggttaggagaatggctctggaccgcaggaactataagcagcttgtg 2471 Query: 542 gaaacaacagtagagatggcaaacaaggtgggagttactggtatcgttgggaagattgtt 601 |||||||| |||||||||||||||||||| |||||| ||| ||| ||||||| ||||||| Sbjct: 2472 gaaacaacggtagagatggcaaacaaggttggagttgctgatattgttgggaggattgtt 2531 Query: 602 gaggatctgaaagatgaaag 621 |||||||||||||||||||| Sbjct: 2532 gaggatctgaaagatgaaag 2551
>dbj|AP005316.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0527E02 Length = 176826 Score = 634 bits (320), Expect = e-179 Identities = 545/620 (87%) Strand = Plus / Plus Query: 5 aagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctcatg 64 ||||| ||||| ||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 124736 aagtcttggcaggctcggcacactggtattaagattgttcagcagattgctattctcatg 124795 Query: 65 ggctgcgctgttctgcctcaccttaagaacctagttgagatcattgagcatggtctaagc 124 ||||| ||||||||||| ||||| | | | ||||||| ||||||||||||||||| || Sbjct: 124796 ggctgtgctgttctgccacacctcaggtccttagttgatatcattgagcatggtctgagt 124855 Query: 125 gatgagaaccagaaagtgcggacgatcacagctctctctcttgctgcacttgctgaagct 184 ||||| ||||||||||| ||||| ||||| || || |||||||||||||||||||| ||| Sbjct: 124856 gatgaaaaccagaaagtacggacaatcaccgcactgtctcttgctgcacttgctgaggct 124915 Query: 185 gctgcgccctatggtatagaaagttttgatagtgtcctgaaacctctctggaagggtatc 244 || || ||||||||||||||||||||||||| || ||| ||| | |||||||||| | Sbjct: 124916 gccgcaccctatggtatagaaagttttgatacggtgttgaggcctttgtggaagggtacc 124975 Query: 245 agatctcaccgtggaaaggtccttgctgccttcttgaaggctattggtttcatcatccct 304 | ||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 124976 aaatctcaccgtggaaaggtccttgctgctttcttgaaagccgttggtttcatcatccct 125035 Query: 305 cttatggatgctctgtatgccagttactacacgaaggaggtgatgcaagtcctgattaga 364 |||||||||| | ||||||||||||||||| | || |||||| | | |||||||||| Sbjct: 125036 cttatggatgttgaatatgccagttactacaccaggggggtgattccaatcctgattagg 125095 Query: 365 gagttccagtccccagacgaagagatgaagaagattgtcctgaaggttgttaagcagtgt 424 ||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| || ||| Sbjct: 125096 gagttccagtcaccagatgaagagatgaaaaagattgtcctgaaggttgttaaacaatgt 125155 Query: 425 gtcagtacagagggtgtggaggctgattatatccggagtgacatccttccagacttcttc 484 ||||||||||||||||| |||||||| |||||||| | || |||||||||||| |||||| Sbjct: 125156 gtcagtacagagggtgtagaggctgactatatccgtaatggcatccttccagagttcttc 125215 Query: 485 aaacacttctgggttaggagaatggccctagatcgtaggaactataagcaacttgtggaa 544 ||||| ||| | ||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 125216 cgtcacttttggataaggagaatggctctagatcgtaggaactataaacaacttgtggaa 125275 Query: 545 acaacagtagagatggcaaacaaggtgggagttactggtatcgttgggaagattgttgag 604 |||||||| ||||| ||||||||||| |||||| ||| |||||||||| |||||||||| Sbjct: 125276 acaacagtggagattgcaaacaaggttggagttgctgacatcgttgggaggattgttgag 125335 Query: 605 gatctgaaagatgaaagtga 624 ||||| |||||||||||||| Sbjct: 125336 gatctcaaagatgaaagtga 125355
>ref|NM_125823.2| Arabidopsis thaliana unknown protein AT5G64270 mRNA, complete cds Length = 4146 Score = 129 bits (65), Expect = 1e-26 Identities = 331/417 (79%), Gaps = 2/417 (0%) Strand = Plus / Plus Query: 26 actggtatcaagattgttcagcagattgctattctcatgggctgcgctgttctgcctcac 85 ||||| ||||||||||||||||||||||| || || || || || ||||| ||||||||| Sbjct: 2008 actggaatcaagattgttcagcagattgcgatactaattggttgtgctgtcctgcctcac 2067 Query: 86 cttaagaacctagtt-gagatcattgagcatggtctaagcgatgagaaccagaaagtgcg 144 ||||| | | | | ||||| || || |||||||| || ||||| |||||||| || | Sbjct: 2068 -ttaaggtctttggtagagattatcgaacatggtcttagtgatgaaaaccagaaggttag 2126 Query: 145 gacgatcacagctctctctcttgctgcacttgctgaagctgctgcgccctatggtataga 204 ||| || || || | || || ||||| ||||||||||||||||| || |||||||| || Sbjct: 2127 gactattaccgcattgtcactggctgctcttgctgaagctgctgctccatatggtattga 2186 Query: 205 aagttttgatagtgtcctgaaacctctctggaagggtatcagatctcaccgtggaaaggt 264 || |||||| ||| ||||| ||| | ||||| ||||| || || |||||||| || || Sbjct: 2187 gagctttgattctgttctgaagcctttgtggaaaggtattaggtcgcaccgtggtaaagt 2246 Query: 265 ccttgctgccttcttgaaggctattggtttcatcatccctcttatggatgctctgtatgc 324 | ||||| ||||||||||| || ||||| ||||| || | ||||||||| | ||||| Sbjct: 2247 tttagctgctttcttgaaggcgatcggttttatcattcccttgatggatgctatatatgc 2306 Query: 325 cagttactacacgaaggaggtgatgcaagtcctgattagagagttccagtccccagacga 384 || ||||| || || || || ||| || ||||| | ||||||||||| || || || Sbjct: 2307 gagctactatacaaaagaagtcatggttatcttgattcgtgagttccagtcgcctgatga 2366 Query: 385 agagatgaagaagattgtcctgaaggttgttaagcagtgtgtcagtacagagggtgt 441 ||||||||||||||| ||||| ||||| || || |||||||| |||||||||||||| Sbjct: 2367 agagatgaagaagatcgtcctcaaggtggtgaaacagtgtgtaagtacagagggtgt 2423
>dbj|AB008268.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSJ1 Length = 83594 Score = 129 bits (65), Expect = 1e-26 Identities = 331/417 (79%), Gaps = 2/417 (0%) Strand = Plus / Plus Query: 26 actggtatcaagattgttcagcagattgctattctcatgggctgcgctgttctgcctcac 85 ||||| ||||||||||||||||||||||| || || || || || ||||| ||||||||| Sbjct: 33571 actggaatcaagattgttcagcagattgcgatactaattggttgtgctgtcctgcctcac 33630 Query: 86 cttaagaacctagtt-gagatcattgagcatggtctaagcgatgagaaccagaaagtgcg 144 ||||| | | | | ||||| || || |||||||| || ||||| |||||||| || | Sbjct: 33631 -ttaaggtctttggtagagattatcgaacatggtcttagtgatgaaaaccagaaggttag 33689 Query: 145 gacgatcacagctctctctcttgctgcacttgctgaagctgctgcgccctatggtataga 204 ||| || || || | || || ||||| ||||||||||||||||| || |||||||| || Sbjct: 33690 gactattaccgcattgtcactggctgctcttgctgaagctgctgctccatatggtattga 33749 Query: 205 aagttttgatagtgtcctgaaacctctctggaagggtatcagatctcaccgtggaaaggt 264 || |||||| ||| ||||| ||| | ||||| ||||| || || |||||||| || || Sbjct: 33750 gagctttgattctgttctgaagcctttgtggaaaggtattaggtcgcaccgtggtaaagt 33809 Query: 265 ccttgctgccttcttgaaggctattggtttcatcatccctcttatggatgctctgtatgc 324 | ||||| ||||||||||| || ||||| ||||| || | ||||||||| | ||||| Sbjct: 33810 tttagctgctttcttgaaggcgatcggttttatcattcccttgatggatgctatatatgc 33869 Query: 325 cagttactacacgaaggaggtgatgcaagtcctgattagagagttccagtccccagacga 384 || ||||| || || || || ||| || ||||| | ||||||||||| || || || Sbjct: 33870 gagctactatacaaaagaagtcatggttatcttgattcgtgagttccagtcgcctgatga 33929 Query: 385 agagatgaagaagattgtcctgaaggttgttaagcagtgtgtcagtacagagggtgt 441 ||||||||||||||| ||||| ||||| || || |||||||| |||||||||||||| Sbjct: 33930 agagatgaagaagatcgtcctcaaggtggtgaaacagtgtgtaagtacagagggtgt 33986
>gb|AY648823.1| Danio rerio splicing factor 3b subunit 1, 155kDa mRNA, partial cds Length = 2915 Score = 123 bits (62), Expect = 7e-25 Identities = 332/422 (78%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| || ||||||||| Sbjct: 2016 aagaaatcctggcaggctcgccacacgggtattaagatcgtccagcaaatcgctattctc 2075 Query: 62 atgggctgcgctgttctgcctcaccttaagaacctagttgagatcattgagcatggtcta 121 |||||||| ||| | ||||| || ||| | | | || ||||| || ||||||||||| Sbjct: 2076 atgggctgtgctatcctgccacatcttcgcagcttggtggagattatcgagcatggtctc 2135 Query: 122 agcgatgagaaccagaaagtgcggacgatcacagctctctctcttgctgcacttgctgaa 181 |||||| | |||||||| || || |||| ||| | || ||||||| | |||||| Sbjct: 2136 gttgatgagcagcagaaagtacgaaccatcagtgctttggctattgctgccttggctgaa 2195 Query: 182 gctgctgcgccctatggtatagaaagttttgatagtgtcctgaaacctctctggaagggt 241 |||||| | || || ||||| || |||||| ||||||||||||||| ||||||||| Sbjct: 2196 gctgctacaccatacggtatcgagtcctttgattctgtcctgaaacctctttggaagggt 2255 Query: 242 atcagatctcaccgtggaaaggtccttgctgccttcttgaaggctattggtttcatcatc 301 ||||| ||| | || |||| ||||||||||||||||| |||||||| | | | || Sbjct: 2256 atcaggcaacacagaggcaagggtcttgctgccttcttgaaagctattggatacttgatt 2315 Query: 302 cctcttatggatgctctgtatgccagttactacacgaaggaggtgatgcaagtcctgatt 361 ||||||||||||||| || |||| |||||||| | || ||||||| |||| ||| Sbjct: 2316 cctcttatggatgctgaatacgccaactactacaccagagaagtgatgcttatcctcatt 2375 Query: 362 agagagttccagtccccagacgaagagatgaagaagattgtcctgaaggttgttaagcag 421 ||||||||||||| || || ||||| ||||||||||||||||| ||||| || |||||| Sbjct: 2376 cgagagttccagtcacctgatgaagaaatgaagaagattgtccttaaggtggtgaagcag 2435 Query: 422 tg 423 || Sbjct: 2436 tg 2437
>ref|XM_679219.1| PREDICTED: Danio rerio splicing factor 3b, subunit 1, transcript variant 1 (sf3b1), mRNA Length = 4374 Score = 123 bits (62), Expect = 7e-25 Identities = 332/422 (78%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| || ||||||||| Sbjct: 2010 aagaaatcctggcaggctcgccacacgggtattaagatcgtccagcaaatcgctattctc 2069 Query: 62 atgggctgcgctgttctgcctcaccttaagaacctagttgagatcattgagcatggtcta 121 |||||||| ||| | ||||| || ||| | | | || ||||| || ||||||||||| Sbjct: 2070 atgggctgtgctatcctgccacatcttcgcagcttggtggagattatcgagcatggtctc 2129 Query: 122 agcgatgagaaccagaaagtgcggacgatcacagctctctctcttgctgcacttgctgaa 181 |||||| | |||||||| || || |||| ||| | || ||||||| | |||||| Sbjct: 2130 gttgatgagcagcagaaagtacgaaccatcagtgctttggctattgctgccttggctgaa 2189 Query: 182 gctgctgcgccctatggtatagaaagttttgatagtgtcctgaaacctctctggaagggt 241 |||||| | || || ||||| || |||||| ||||||||||||||| ||||||||| Sbjct: 2190 gctgctacaccatacggtatcgagtcctttgattctgtcctgaaacctctttggaagggt 2249 Query: 242 atcagatctcaccgtggaaaggtccttgctgccttcttgaaggctattggtttcatcatc 301 ||||| ||| | || |||| ||||||||||||||||| |||||||| | | | || Sbjct: 2250 atcaggcaacacagaggcaagggtcttgctgccttcttgaaagctattggatacttgatt 2309 Query: 302 cctcttatggatgctctgtatgccagttactacacgaaggaggtgatgcaagtcctgatt 361 ||||||||||||||| || |||| |||||||| | || ||||||| |||| ||| Sbjct: 2310 cctcttatggatgctgaatacgccaactactacaccagagaagtgatgcttatcctcatt 2369 Query: 362 agagagttccagtccccagacgaagagatgaagaagattgtcctgaaggttgttaagcag 421 ||||||||||||| || || ||||| ||||||||||||||||| ||||| || |||||| Sbjct: 2370 cgagagttccagtcacctgatgaagaaatgaagaagattgtccttaaggtggtgaagcag 2429 Query: 422 tg 423 || Sbjct: 2430 tg 2431
>ref|XM_865029.1| PREDICTED: Bos taurus similar to splicing factor 3b, subunit 1 isoform 1, transcript variant 2 (LOC510177), mRNA Length = 7506 Score = 95.6 bits (48), Expect = 2e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 ||||||||||||||||| ||||||||||||| |||||||| |||||||| ||||||||| Sbjct: 3152 aagaagtcctggcaagcgagacacactggtataaagattgtacagcagatagctattctc 3211 Query: 62 atgggctg 69 |||||||| Sbjct: 3212 atgggctg 3219
>ref|XM_587289.2| PREDICTED: Bos taurus similar to splicing factor 3b, subunit 1 isoform 1, transcript variant 1 (LOC510177), mRNA Length = 5480 Score = 95.6 bits (48), Expect = 2e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 ||||||||||||||||| ||||||||||||| |||||||| |||||||| ||||||||| Sbjct: 1126 aagaagtcctggcaagcgagacacactggtataaagattgtacagcagatagctattctc 1185 Query: 62 atgggctg 69 |||||||| Sbjct: 1186 atgggctg 1193
>ref|XM_852056.1| PREDICTED: Canis familiaris similar to splicing factor 3b, subunit 1 isoform 1, transcript variant 16 (LOC488456), mRNA Length = 4648 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 ||||||||||||||||| ||||||||||||| |||||||| |||||||| |||||||| Sbjct: 2029 aagaagtcctggcaagcgagacacactggtattaagattgtacagcagatagctattctt 2088 Query: 62 atgggctg 69 |||||||| Sbjct: 2089 atgggctg 2096
>ref|XM_852013.1| PREDICTED: Canis familiaris similar to splicing factor 3b, subunit 1 isoform 1, transcript variant 15 (LOC488456), mRNA Length = 4627 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 ||||||||||||||||| ||||||||||||| |||||||| |||||||| |||||||| Sbjct: 2008 aagaagtcctggcaagcgagacacactggtattaagattgtacagcagatagctattctt 2067 Query: 62 atgggctg 69 |||||||| Sbjct: 2068 atgggctg 2075
>ref|XM_851971.1| PREDICTED: Canis familiaris similar to splicing factor 3b, subunit 1 isoform 1, transcript variant 14 (LOC488456), mRNA Length = 4468 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 ||||||||||||||||| ||||||||||||| |||||||| |||||||| |||||||| Sbjct: 1849 aagaagtcctggcaagcgagacacactggtattaagattgtacagcagatagctattctt 1908 Query: 62 atgggctg 69 |||||||| Sbjct: 1909 atgggctg 1916
>ref|XM_851929.1| PREDICTED: Canis familiaris similar to splicing factor 3b, subunit 1 isoform 1, transcript variant 13 (LOC488456), mRNA Length = 4645 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 ||||||||||||||||| ||||||||||||| |||||||| |||||||| |||||||| Sbjct: 2005 aagaagtcctggcaagcgagacacactggtattaagattgtacagcagatagctattctt 2064 Query: 62 atgggctg 69 |||||||| Sbjct: 2065 atgggctg 2072
>ref|XM_851889.1| PREDICTED: Canis familiaris similar to splicing factor 3b, subunit 1 isoform 1, transcript variant 12 (LOC488456), mRNA Length = 5940 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 ||||||||||||||||| ||||||||||||| |||||||| |||||||| |||||||| Sbjct: 3321 aagaagtcctggcaagcgagacacactggtattaagattgtacagcagatagctattctt 3380 Query: 62 atgggctg 69 |||||||| Sbjct: 3381 atgggctg 3388
>ref|XM_851847.1| PREDICTED: Canis familiaris similar to splicing factor 3b, subunit 1 isoform 1, transcript variant 11 (LOC488456), mRNA Length = 4825 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 ||||||||||||||||| ||||||||||||| |||||||| |||||||| |||||||| Sbjct: 2206 aagaagtcctggcaagcgagacacactggtattaagattgtacagcagatagctattctt 2265 Query: 62 atgggctg 69 |||||||| Sbjct: 2266 atgggctg 2273
>ref|XM_545578.2| PREDICTED: Canis familiaris similar to splicing factor 3b, subunit 1 isoform 1, transcript variant 1 (LOC488456), mRNA Length = 4624 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 ||||||||||||||||| ||||||||||||| |||||||| |||||||| |||||||| Sbjct: 2005 aagaagtcctggcaagcgagacacactggtattaagattgtacagcagatagctattctt 2064 Query: 62 atgggctg 69 |||||||| Sbjct: 2065 atgggctg 2072
>ref|XM_516006.1| PREDICTED: Pan troglodytes similar to pre-mRNA splicing factor SF3b 155 kDa subunit (LOC459850), mRNA Length = 4164 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 ||||||||||||||||| ||||||||||||| |||||||| || ||||| |||||||| Sbjct: 2212 aagaagtcctggcaagcgagacacactggtattaagattgtacaacagatagctattctt 2271 Query: 62 atgggctgcgc 72 ||||||||||| Sbjct: 2272 atgggctgcgc 2282
>emb|BX530407.26| Zebrafish DNA sequence from clone DKEY-83M22 in linkage group 9, complete sequence Length = 292409 Score = 83.8 bits (42), Expect = 6e-13 Identities = 120/146 (82%) Strand = Plus / Minus Query: 266 cttgctgccttcttgaaggctattggtttcatcatccctcttatggatgctctgtatgcc 325 ||||||||||||||||| |||||||| | | | || ||||||||||||||| || ||| Sbjct: 152301 cttgctgccttcttgaaagctattggatacttgattcctcttatggatgctgaatacgcc 152242 Query: 326 agttactacacgaaggaggtgatgcaagtcctgattagagagttccagtccccagacgaa 385 | |||||||| | || ||||||| |||| ||| ||||||||||||| || || ||| Sbjct: 152241 aactactacaccagagaagtgatgcttatcctcattcgagagttccagtcacctgatgaa 152182 Query: 386 gagatgaagaagattgtcctgaaggt 411 || ||||||||||||||||| ||||| Sbjct: 152181 gaaatgaagaagattgtccttaaggt 152156 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| || ||||||||| Sbjct: 152771 aagaaatcctggcaggctcgccacacgggtattaagatcgtccagcaaatcgctattctc 152712 Query: 62 atgggctg 69 |||||||| Sbjct: 152711 atgggctg 152704 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 217 tgtcctgaaacctctctggaagggtatcag 246 ||||||||||||||| |||||||||||||| Sbjct: 152434 tgtcctgaaacctctttggaagggtatcag 152405
>emb|BX936402.12| Zebrafish DNA sequence from clone CH211-128D20 in linkage group 9, complete sequence Length = 156082 Score = 83.8 bits (42), Expect = 6e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 266 cttgctgccttcttgaaggctattggtttcatcatccctcttatggatgctctgtatgcc 325 ||||||||||||||||| |||||||| | | | || ||||||||||||||| || ||| Sbjct: 136034 cttgctgccttcttgaaagctattggatacttgattcctcttatggatgctgaatacgcc 136093 Query: 326 agttactacacgaaggaggtgatgcaagtcctgattagagagttccagtccccagacgaa 385 | |||||||| | || ||||||| |||| ||| ||||||||||||| || || ||| Sbjct: 136094 aactactacaccagagaagtgatgcttatcctcattcgagagttccagtcacctgatgaa 136153 Query: 386 gagatgaagaagattgtcctgaaggt 411 || ||||||||||||||||| ||||| Sbjct: 136154 gaaatgaagaagattgtccttaaggt 136179 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| || ||||||||| Sbjct: 135564 aagaaatcctggcaggctcgccacacgggtattaagatcgtccagcaaatcgctattctc 135623 Query: 62 atgggctg 69 |||||||| Sbjct: 135624 atgggctg 135631 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 217 tgtcctgaaacctctctggaagggtatcag 246 ||||||||||||||| |||||||||||||| Sbjct: 135901 tgtcctgaaacctctttggaagggtatcag 135930
>emb|BX571722.18| Zebrafish DNA sequence from clone DKEY-96O13 in linkage group 9, complete sequence Length = 228214 Score = 83.8 bits (42), Expect = 6e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 266 cttgctgccttcttgaaggctattggtttcatcatccctcttatggatgctctgtatgcc 325 ||||||||||||||||| |||||||| | | | || ||||||||||||||| || ||| Sbjct: 173629 cttgctgccttcttgaaagctattggatacttgattcctcttatggatgctgaatacgcc 173688 Query: 326 agttactacacgaaggaggtgatgcaagtcctgattagagagttccagtccccagacgaa 385 | |||||||| | || ||||||| |||| ||| ||||||||||||| || || ||| Sbjct: 173689 aactactacaccagagaagtgatgcttatcctcattcgagagttccagtcacctgatgaa 173748 Query: 386 gagatgaagaagattgtcctgaaggt 411 || ||||||||||||||||| ||||| Sbjct: 173749 gaaatgaagaagattgtccttaaggt 173774 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| || ||||||||| Sbjct: 173159 aagaaatcctggcaggctcgccacacgggtattaagatcgtccagcaaatcgctattctc 173218 Query: 62 atgggctg 69 |||||||| Sbjct: 173219 atgggctg 173226 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 217 tgtcctgaaacctctctggaagggtatcag 246 ||||||||||||||| |||||||||||||| Sbjct: 173496 tgtcctgaaacctctttggaagggtatcag 173525
>ref|NM_012433.2| Homo sapiens splicing factor 3b, subunit 1, 155kDa (SF3B1), transcript variant 1, mRNA Length = 4314 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 ||||||||||||||||| ||||||||||||| |||||||| || ||||| |||||||| Sbjct: 2011 aagaagtcctggcaagcgagacacactggtattaagattgtacaacagatagctattctt 2070 Query: 62 atgggctg 69 |||||||| Sbjct: 2071 atgggctg 2078
>gb|BC056155.1| Homo sapiens splicing factor 3b, subunit 1, 155kDa, mRNA (cDNA clone IMAGE:3908845), partial cds Length = 2411 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 ||||||||||||||||| ||||||||||||| |||||||| || ||||| |||||||| Sbjct: 2007 aagaagtcctggcaagcgagacacactggtattaagattgtacaacagatagctattctt 2066 Query: 62 atgggctg 69 |||||||| Sbjct: 2067 atgggctg 2074
>gb|AC010746.8| Homo sapiens BAC clone RP11-550E21 from 2, complete sequence Length = 229379 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Minus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 ||||||||||||||||| ||||||||||||| |||||||| || ||||| |||||||| Sbjct: 138286 aagaagtcctggcaagcgagacacactggtattaagattgtacaacagatagctattctt 138227 Query: 62 atgggctg 69 |||||||| Sbjct: 138226 atgggctg 138219
>gb|BC039020.1| Homo sapiens, Similar to splicing factor 3b, subunit 1, 155 kDa, clone IMAGE:6043857, mRNA Length = 2384 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 ||||||||||||||||| ||||||||||||| |||||||| || ||||| |||||||| Sbjct: 1980 aagaagtcctggcaagcgagacacactggtattaagattgtacaacagatagctattctt 2039 Query: 62 atgggctg 69 |||||||| Sbjct: 2040 atgggctg 2047
>gb|AF054284.1|AF054284 Homo sapiens spliceosomal protein SAP 155 mRNA, complete cds Length = 4259 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 ||||||||||||||||| ||||||||||||| |||||||| || ||||| |||||||| Sbjct: 1963 aagaagtcctggcaagcgagacacactggtattaagattgtacaacagatagctattctt 2022 Query: 62 atgggctg 69 |||||||| Sbjct: 2023 atgggctg 2030
>ref|XM_790131.1| PREDICTED: Strongylocentrotus purpuratus similar to splicing factor 3b, subunit 1 isoform 1 (LOC590531), mRNA Length = 3399 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 365 gagttccagtccccagacgaagagatgaagaagattgtcctgaaggttgttaagcagtgt 424 ||||||||||| || || ||||| ||||||||||||||| |||||||||| ||||||||| Sbjct: 1795 gagttccagtctcctgatgaagaaatgaagaagattgtcttgaaggttgtgaagcagtgt 1854 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 209 tttgatagtgtcctgaaacctctctggaagggtatcag 246 ||||| |||||||| || |||||||||||||||||||| Sbjct: 1639 tttgacagtgtcctcaagcctctctggaagggtatcag 1676 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 |||||||||||||| ||||| || || ||||| ||||| || |||||||| ||||| || Sbjct: 1432 aagaagtcctggcaggctcgtcataccggtattaagatcgtccagcagatcgctatcctg 1491 Query: 62 atggg 66 ||||| Sbjct: 1492 atggg 1496
>ref|XM_310958.2| Anopheles gambiae str. PEST ENSANGP00000019328 (ENSANGG00000016839), partial mRNA Length = 3933 Score = 69.9 bits (35), Expect = 1e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 365 gagttccagtccccagacgaagagatgaagaagattgtcctgaaggttgttaagcagtg 423 ||||||||||| || ||||| ||||||||||||||||| |||||||| || |||||||| Sbjct: 2344 gagttccagtcgccggacgaggagatgaagaagattgtgctgaaggtggtgaagcagtg 2402 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 |||||||| ||||| || || ||||| || |||||||| || |||||||| || || || Sbjct: 1981 aagaagtcgtggcaggcgcgccacaccggcatcaagatcgtgcagcagatcgcgatcctg 2040 Query: 62 atgggctgcgc 72 ||||||||||| Sbjct: 2041 atgggctgcgc 2051
>gb|AC166111.4| Mus musculus BAC clone RP23-68O7 from chromosome 1, complete sequence Length = 185692 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 |||||||| |||||||| | ||||||||||| |||||||| || ||||| || |||||| Sbjct: 169278 aagaagtcttggcaagcgaggcacactggtattaagattgtacaacagatagccattctc 169219 Query: 62 atgggctg 69 |||||||| Sbjct: 169218 atgggctg 169211
>ref|XM_368888.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00356.4) partial mRNA Length = 3648 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 |||||||| ||||| ||||| ||||| ||| ||||||| || |||||||| |||||||| Sbjct: 1705 aagaagtcatggcaggctcgtcacacgggtgtcaagatcgtgcagcagatccctattctc 1764 Query: 62 atgggctgcgctgttctgcc 81 ||||| || || |||||||| Sbjct: 1765 atgggatgtgccgttctgcc 1784
>ref|NM_031179.1| Mus musculus splicing factor 3b, subunit 1 (Sf3b1), mRNA Length = 6232 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 |||||||| |||||||| | ||||||||||| |||||||| || ||||| || |||||| Sbjct: 2100 aagaagtcttggcaagcgaggcacactggtattaagattgtacaacagatagccattctc 2159 Query: 62 atgggctg 69 |||||||| Sbjct: 2160 atgggctg 2167
>dbj|AK140982.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130090E12 product:splicing factor 3b, subunit 1, full insert sequence Length = 2374 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 |||||||| |||||||| | ||||||||||| |||||||| || ||||| || |||||| Sbjct: 1993 aagaagtcttggcaagcgaggcacactggtattaagattgtacaacagatagccattctc 2052 Query: 62 atgggctg 69 |||||||| Sbjct: 2053 atgggctg 2060
>gb|BC097718.1| Xenopus laevis cDNA clone MGC:115390 IMAGE:3378512, complete cds Length = 2491 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 357 tgattagagagttccagtccccagacgaagagatgaagaagattgtcctgaaggttgtta 416 |||||||||| |||||||||||||| ||||| |||||||| || || || ||||| |||| Sbjct: 2364 tgattagagaattccagtccccagatgaagaaatgaagaaaatcgtgctaaaggtggtta 2423 Query: 417 agcagtgt 424 | |||||| Sbjct: 2424 aacagtgt 2431 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 257 ggaaaggtccttgctgccttcttgaaggctattggtttcatcatccctcttatggatgc 315 ||||||| ||||||||||| |||||||||||||| | | || |||||||||||||| Sbjct: 2264 ggaaagggtcttgctgcctttttgaaggctattggctatctgattcctcttatggatgc 2322
>ref|XM_343570.2| PREDICTED: Rattus norvegicus splicing factor 3b, subunit 1 (Sf3b1), mRNA Length = 6179 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 |||||||| |||||||| | ||||||||||| |||||||| || ||||| || |||||| Sbjct: 2149 aagaagtcttggcaagcgaggcacactggtattaagattgtacaacagatagccattctc 2208 Query: 62 atgggctg 69 |||||||| Sbjct: 2209 atgggctg 2216
>gb|AC108391.14| Mus musculus chromosome 1, clone RP23-16N14, complete sequence Length = 257730 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 |||||||| |||||||| | ||||||||||| |||||||| || ||||| || |||||| Sbjct: 123332 aagaagtcttggcaagcgaggcacactggtattaagattgtacaacagatagccattctc 123273 Query: 62 atgggctg 69 |||||||| Sbjct: 123272 atgggctg 123265
>emb|Y08997.1|XLNUCB2PR Xenopus laevis mRNA for 146 kDa nuclear protein Length = 4255 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 357 tgattagagagttccagtccccagacgaagagatgaagaagattgtcctgaaggttgtta 416 |||||||||| |||||||||||||| ||||| |||||||| || || || ||||| |||| Sbjct: 2414 tgattagagaattccagtccccagatgaagaaatgaagaaaatcgtgctaaaggtggtta 2473 Query: 417 agcagtgt 424 | |||||| Sbjct: 2474 aacagtgt 2481 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 257 ggaaaggtccttgctgccttcttgaaggctattggtttcatcatccctcttatggatgc 315 ||||||| ||||||||||| |||||||||||||| | | || |||||||||||||| Sbjct: 2314 ggaaagggtcttgctgcctttttgaaggctattggctatctgattcctcttatggatgc 2372
>gb|DQ206611.1| Monosiga brevicollis isolate TOA37 splicing factor 3b subunit 1 mRNA, partial cds Length = 405 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 365 gagttccagtccccagacgaagagatgaagaagattgtcctgaaggttgttaagcagtgt 424 ||||||||||| || || |||||||||||||||||||| || ||||| || ||||||||| Sbjct: 334 gagttccagtcgcccgatgaagagatgaagaagattgtgctcaaggtggtcaagcagtgt 393
>dbj|AB037890.1| Mus musculus Sf3b1 mRNA for pre-mRNA splicing factor SF3b 155 kDa subunit, complete cds Length = 6232 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 |||||||| |||||||| | ||||||||||| |||||||| || ||||| || |||||| Sbjct: 2100 aagaagtcttggcaagcgaggcacactggtattaagattgtacaacagatagccattctc 2159 Query: 62 atgggctg 69 |||||||| Sbjct: 2160 atgggctg 2167
>ref|XM_421912.1| PREDICTED: Gallus gallus similar to pre-mRNA splicing factor SF3b 155 kDa subunit (LOC424056), mRNA Length = 4670 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 362 agagagttccagtccccagacgaagagatgaagaagattgtcctgaaggttgttaagcag 421 |||||||||||||| || || ||||||||||| || ||||| |||||||| || |||||| Sbjct: 2758 agagagttccagtctcctgatgaagagatgaaaaaaattgttctgaaggtggtaaagcag 2817 Query: 422 tgt 424 ||| Sbjct: 2818 tgt 2820 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 8 tcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctcatggg 66 ||||||||||| | || ||||| ||||||||||| ||||| ||||||||||| ||||| Sbjct: 2404 tcctggcaagcgaggcatactggcatcaagattgtgcagcaaattgctattcttatggg 2462
>ref|XM_654932.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2420.2), mRNA Length = 3675 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 |||||||||||||| || ||||||||||| ||||||| || ||||||||| |||| || Sbjct: 1732 aagaagtcctggcaggcccgacacactggggtcaagatcgtccagcagattcctatcctt 1791 Query: 62 atgggctgcgc 72 ||||| ||||| Sbjct: 1792 atgggttgcgc 1802
>ref|XM_387227.1| Gibberella zeae PH-1 strain PH-1; NRRL 31084 chromosome 4 Length = 3654 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 5 aagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctcatg 64 ||||| ||||||||||| || || ||| |||||||||| || || ||| ||||||||||| Sbjct: 1714 aagtcatggcaagctcggcatacaggtgtcaagattgtccaacaaattcctattctcatg 1773 Query: 65 ggctgcgctgt 75 ||||| ||||| Sbjct: 1774 ggctgtgctgt 1784
>ref|XM_638293.1| Dictyostelium discoideum hypothetical protein (DDB0169544), partial mRNA Length = 3156 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 11 tggcaagctcgacacactggtatcaagattgttcagcagattgctattctcatggg 66 |||||||| || ||||||||||| ||||||||||| || ||||| ||||| ||||| Sbjct: 1210 tggcaagcacgtcacactggtataaagattgttcaacaaattgccattctaatggg 1265
>gb|AC117082.2| Dictyostelium discoideum chromosome 2 map complement(6807709-6776860) strain AX4, complete sequence Length = 30849 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 11 tggcaagctcgacacactggtatcaagattgttcagcagattgctattctcatggg 66 |||||||| || ||||||||||| ||||||||||| || ||||| ||||| ||||| Sbjct: 17184 tggcaagcacgtcacactggtataaagattgttcaacaaattgccattctaatggg 17239
>gb|DQ206533.1| Suberites fuscus isolate TOA37 splicing factor 3b subunit 1 mRNA, partial cds Length = 1264 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 357 tgattagagagttccagtccccagacgaagagatgaagaagattgtcctgaaggttgtta 416 |||| |||||||||||| ||||| ||||| ||||| |||||||| |||||||||| | Sbjct: 326 tgatcagagagttccagagtccagatgaagaaatgaaaaagattgtgttgaaggttgtga 385 Query: 417 agcagtgt 424 |||||||| Sbjct: 386 agcagtgt 393
>ref|XM_776460.1| PREDICTED: Strongylocentrotus purpuratus similar to splicing factor 3b, subunit 1 (LOC576119), partial mRNA Length = 2322 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 209 tttgatagtgtcctgaaacctctctggaagggtatcag 246 ||||| |||||||| || |||||||||||||||||||| Sbjct: 2269 tttgacagtgtcctcaagcctctctggaagggtatcag 2306 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 |||||||||||||| ||||| || || ||||| ||||| || |||||||| ||||| || Sbjct: 2062 aagaagtcctggcaggctcgtcataccggtattaagatcgtccagcagatcgctatcctg 2121 Query: 62 atggg 66 ||||| Sbjct: 2122 atggg 2126
>ref|NM_134690.2| Drosophila melanogaster CG2807-RA (CG2807), mRNA Length = 4083 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 1 gaagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgc 54 |||||| ||||||||||| || |||||||| ||||| ||||| ||||| ||||| Sbjct: 2130 gaagaaatcctggcaagcgcggcacactggcatcaaaattgtccagcaaattgc 2183 Score = 40.1 bits (20), Expect = 8.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 365 gagttccagtccccagacgaagagatgaagaagattgtcctgaaggttgttaagca 420 ||||||||||| ||||| || || ||||| |||||||| || ||||| || ||||| Sbjct: 2494 gagttccagtctccagatgaggaaatgaaaaagattgtactaaaggtggtgaagca 2549
>gb|BT022707.1| Drosophila melanogaster RH74732 full insert cDNA Length = 4163 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 1 gaagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgc 54 |||||| ||||||||||| || |||||||| ||||| ||||| ||||| ||||| Sbjct: 2130 gaagaaatcctggcaagcgcggcacactggcatcaaaattgtccagcaaattgc 2183 Score = 40.1 bits (20), Expect = 8.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 365 gagttccagtccccagacgaagagatgaagaagattgtcctgaaggttgttaagca 420 ||||||||||| ||||| || || ||||| |||||||| || ||||| || ||||| Sbjct: 2494 gagttccagtctccagatgaggaaatgaaaaagattgtactaaaggtggtgaagca 2549
>gb|AC008002.3|AC008002 Drosophila melanogaster, chromosome 2L, region 21D-21E, BAC clone BACR48E08, complete sequence Length = 182726 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 1 gaagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgc 54 |||||| ||||||||||| || |||||||| ||||| ||||| ||||| ||||| Sbjct: 86610 gaagaaatcctggcaagcgcggcacactggcatcaaaattgtccagcaaattgc 86557 Score = 40.1 bits (20), Expect = 8.6 Identities = 47/56 (83%) Strand = Plus / Minus Query: 365 gagttccagtccccagacgaagagatgaagaagattgtcctgaaggttgttaagca 420 ||||||||||| ||||| || || ||||| |||||||| || ||||| || ||||| Sbjct: 86246 gagttccagtctccagatgaggaaatgaaaaagattgtactaaaggtggtgaagca 86191
>gb|AE003589.4| Drosophila melanogaster chromosome 2L, section 2 of 83 of the complete sequence Length = 306076 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 1 gaagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgc 54 |||||| ||||||||||| || |||||||| ||||| ||||| ||||| ||||| Sbjct: 264857 gaagaaatcctggcaagcgcggcacactggcatcaaaattgtccagcaaattgc 264910 Score = 40.1 bits (20), Expect = 8.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 365 gagttccagtccccagacgaagagatgaagaagattgtcctgaaggttgttaagca 420 ||||||||||| ||||| || || ||||| |||||||| || ||||| || ||||| Sbjct: 265221 gagttccagtctccagatgaggaaatgaaaaagattgtactaaaggtggtgaagca 265276
>gb|AC004573.1|AC004573 Drosophila melanogaster, chromosome 2L, region 21C5-21D1, P1 clone DS07610, complete sequence Length = 85095 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 1 gaagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgc 54 |||||| ||||||||||| || |||||||| ||||| ||||| ||||| ||||| Sbjct: 30287 gaagaaatcctggcaagcgcggcacactggcatcaaaattgtccagcaaattgc 30340 Score = 40.1 bits (20), Expect = 8.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 365 gagttccagtccccagacgaagagatgaagaagattgtcctgaaggttgttaagca 420 ||||||||||| ||||| || || ||||| |||||||| || ||||| || ||||| Sbjct: 30651 gagttccagtctccagatgaggaaatgaaaaagattgtactaaaggtggtgaagca 30706
>ref|XM_501149.1| Yarrowia lipolytica CLIB122, YALI0B20724g predicted mRNA Length = 3477 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 35 aagattgttcagcagattgctattctcat 63 |||||||| |||||||||||||||||||| Sbjct: 1537 aagattgtccagcagattgctattctcat 1565
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 35 aagattgttcagcagattgctattctcat 63 |||||||| |||||||||||||||||||| Sbjct: 2730133 aagattgtccagcagattgctattctcat 2730105
>ref|XM_623729.1| PREDICTED: Apis mellifera similar to ENSANGP00000019328 (LOC551331), mRNA Length = 4418 Score = 48.1 bits (24), Expect = 0.035 Identities = 48/56 (85%) Strand = Plus / Plus Query: 11 tggcaagctcgacacactggtatcaagattgttcagcagattgctattctcatggg 66 ||||||||||| || |||||||| || ||||| || || ||||||||||| ||||| Sbjct: 2198 tggcaagctcgtcatactggtataaaaattgtacaacaaattgctattcttatggg 2253 Score = 44.1 bits (22), Expect = 0.55 Identities = 52/62 (83%) Strand = Plus / Plus Query: 503 agaatggccctagatcgtaggaactataagcaacttgtggaaacaacagtagagatggca 562 |||||||| |||||||||| || |||| ||||||||||| ||||| ||||| || ||| Sbjct: 2690 agaatggctttagatcgtagaaattatagacaacttgtggatacaactgtagaaattgca 2749 Query: 563 aa 564 || Sbjct: 2750 aa 2751
>gb|AC157574.6| Mus musculus BAC clone RP23-1G17 from chromosome 8, complete sequence Length = 216443 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 290 ggtttcatcatccctcttatggatgc 315 ||||||||| |||||||||||||||| Sbjct: 153346 ggtttcatcttccctcttatggatgc 153321
>ref|XM_756295.1| Ustilago maydis 521 hypothetical protein (UM05241.1) partial mRNA Length = 3690 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Plus Query: 378 cagacgaagagatgaagaagattgtcctgaaggttgttaagcagtg 423 |||||||||||||||| ||||| || || ||||| || |||||||| Sbjct: 2108 cagacgaagagatgaaaaagatcgttcttaaggtggtcaagcagtg 2153
>ref|XM_750618.1| Aspergillus fumigatus Af293 splicing factor 3subunit B 1 (Afu2g13780) partial mRNA Length = 3741 Score = 44.1 bits (22), Expect = 0.55 Identities = 70/86 (81%) Strand = Plus / Plus Query: 2 aagaagtcctggcaagctcgacacactggtatcaagattgttcagcagattgctattctc 61 ||||||||||||||||| || || || || ||||||| || || |||||| | |||||| Sbjct: 1798 aagaagtcctggcaagcccggcataccggagtcaagatcgtccaacagattcccattctc 1857 Query: 62 atgggctgcgctgttctgcctcacct 87 ||||| || || |||| |||||||| Sbjct: 1858 atgggttgtgccattctacctcacct 1883
>emb|AL583883.12| Mouse DNA sequence from clone RP23-400F7 on chromosome 15, complete sequence Length = 209857 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 290 ggtttcatcatccctcttatggatgc 315 ||||||||| |||||||||||||||| Sbjct: 123028 ggtttcatcttccctcttatggatgc 123053
>gb|AC158144.13| Mus musculus chromosome 7, clone RP23-82N3, complete sequence Length = 213341 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 ggaaaggtccttgctgccttc 277 ||||||||||||||||||||| Sbjct: 111910 ggaaaggtccttgctgccttc 111890
>emb|AL356957.27| Human DNA sequence from clone RP11-403I13 on chromosome 1 Contains the 5' end of a novel pseudogene, a profilin 1 (PFN1) pseudogene, six novel genes and a novel pseudogene, complete sequence Length = 204702 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 agaacctagttgagatcattg 110 ||||||||||||||||||||| Sbjct: 17748 agaacctagttgagatcattg 17728
>ref|XM_966391.1| PREDICTED: Tribolium castaneum similar to CG2807-PA (LOC660131), mRNA Length = 4911 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 380 gacgaagagatgaagaagattgtcctgaaggttgttaagcagtgt 424 |||||||| |||||||||||||| || || || || ||||||||| Sbjct: 2395 gacgaagaaatgaagaagattgtgctcaaagtggtcaagcagtgt 2439
>emb|AL928577.21| Mouse DNA sequence from clone RP23-395H4 on chromosome 4, complete sequence Length = 104509 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 ctcttgctgcacttgctgaag 182 ||||||||||||||||||||| Sbjct: 45279 ctcttgctgcacttgctgaag 45299
>gb|AC113055.9| Mus musculus chromosome 5, clone RP23-251M20, complete sequence Length = 185733 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 agacgaagagatgaagaaga 398 |||||||||||||||||||| Sbjct: 176360 agacgaagagatgaagaaga 176379
>gb|AF429315.1| Homo sapiens junctophilin 3 (JPH3) gene, partial cds Length = 125020 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 ttccagacttcttcaaacac 490 |||||||||||||||||||| Sbjct: 104407 ttccagacttcttcaaacac 104388
>gb|AC118010.11| Mus musculus chromosome 5, clone RP23-451E8, complete sequence Length = 184672 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 agacgaagagatgaagaaga 398 |||||||||||||||||||| Sbjct: 177972 agacgaagagatgaagaaga 177953
>gb|AC130666.9| Mus musculus chromosome 5, clone RP24-79O7, complete sequence Length = 172995 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gcacttgctgaagctgctgc 189 |||||||||||||||||||| Sbjct: 128851 gcacttgctgaagctgctgc 128832
>ref|XM_593715.2| PREDICTED: Bos taurus similar to CG16989-PA (LOC515657), mRNA Length = 3811 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 355 cctgattagagagttccagtcccc 378 |||||| ||||||||||||||||| Sbjct: 1564 cctgatcagagagttccagtcccc 1587
>gb|AC092720.4| Homo sapiens chromosome 16 clone RP11-482M8, complete sequence Length = 169214 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 ttccagacttcttcaaacac 490 |||||||||||||||||||| Sbjct: 66219 ttccagacttcttcaaacac 66238
>emb|CR716159.1|PCC22C8 P. carinii cosmid 22C8 Length = 37288 Score = 40.1 bits (20), Expect = 8.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 165 ttgctgcacttgctgaagctgctgcgccctatggtatagaaagttttgatagtgtc 220 ||||||| ||||| ||||||||||| || |||||| | ||| |||||||| |||| Sbjct: 36637 ttgctgcccttgcagaagctgctgctccatatggttttgaatcttttgatattgtc 36692
>emb|AL353780.15| Human DNA sequence from clone RP11-470F18 on chromosome 9 Contains a novel gene, complete sequence Length = 88238 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 cacagctctctctcttgctgcact 174 ||||||||||||||| |||||||| Sbjct: 6949 cacagctctctctctggctgcact 6972
>emb|AL139093.11| Human DNA sequence from clone RP11-440J4 on chromosome 6 Contains a serine palmitoyltransferase long chain base subunit 1 (SPTLC1) pseudogene, complete sequence Length = 131995 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 ttcttgaaggctattggttt 294 |||||||||||||||||||| Sbjct: 129595 ttcttgaaggctattggttt 129576
>emb|AL136133.14| Human DNA sequence from clone CTA-253N17 on chromosome 1 Contains the 5' end of the C1orf25 gene for chromosome 1 open reading frame 25, the 5' end of the C1orf26 gene for chromosome 1 open reading frame 26 and a CpG island, complete sequence Length = 85565 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 aacctagttgagatcattga 111 |||||||||||||||||||| Sbjct: 23383 aacctagttgagatcattga 23364
>gb|AC159148.10| Mus musculus 10 BAC RP23-42M24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 166208 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 tctcatgggctgcgctgttctgcc 81 |||||||||||||||||| ||||| Sbjct: 126156 tctcatgggctgcgctgtgctgcc 126133 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,127,763 Number of Sequences: 3902068 Number of extensions: 6127763 Number of successful extensions: 123846 Number of sequences better than 10.0: 76 Number of HSP's better than 10.0 without gapping: 77 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 123535 Number of HSP's gapped (non-prelim): 298 length of query: 628 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 605 effective length of database: 17,143,297,704 effective search space: 10371695110920 effective search space used: 10371695110920 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
