Clone Information

BLAST Search Result

Clone Name	bags26i05
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL72_ARATH (P60039) 60S ribosomal protein L7-2	176	8e-46
2	RL73_ARATH (Q9LHP1) 60S ribosomal protein L7-3	177	2e-45
3	RL71_ARATH (P60040) 60S ribosomal protein L7-1	175	2e-45
4	RL7_MOUSE (P14148) 60S ribosomal protein L7	132	2e-32
5	RL7_HUMAN (P18124) 60S ribosomal protein L7	132	2e-32
6	RL7_BOVIN (Q58DT1) 60S ribosomal protein L7	132	2e-32
7	RL7_RAT (P05426) 60S ribosomal protein L7	132	2e-32
8	RL7_YARLI (Q6C603) 60S ribosomal protein L7	130	1e-31
9	RL7_DICDI (P11874) 60S ribosomal protein L7	130	1e-30
10	RL7_DROME (P32100) 60S ribosomal protein L7	127	6e-30
11	RL7_NEUCR (Q7SBD5) 60S ribosomal protein L7	124	8e-30
12	RL7_CAEEL (O01802) 60S ribosomal protein L7	127	8e-30
13	RL7C_SCHPO (O60143) 60S ribosomal protein L7-C	123	8e-29
14	RL7B_SCHPO (P25457) 60S ribosomal protein L7-B	119	9e-28
15	RL7_ASHGO (Q755A7) 60S ribosomal protein L7	117	1e-27
16	RL7B_YEAST (Q12213) 60S ribosomal protein L7-B (L6B) (YL8B)	114	3e-26
17	RL7A_YEAST (P05737) 60S ribosomal protein L7-A (L6A) (YL8A) (RP11)	114	3e-26
18	RL7_DEBHA (Q6BTA4) 60S ribosomal protein L7	114	4e-26
19	RL7_CANGA (Q6FSN6) 60S ribosomal protein L7	112	1e-25
20	RL7A_SCHPO (P17937) 60S ribosomal protein L7-A	109	4e-25
21	RL7L_PONPY (Q5RAH8) Ribosomal protein L7-like 1	75	3e-14
22	RL7L_HUMAN (Q6DKI1) Ribosomal protein L7-like 1	73	1e-13
23	RL7_ENCCU (Q8SS93) 60S ribosomal protein L7	64	9e-11
24	RLP7_KLULA (P32102) Ribosome biogenesis protein RLP7	61	6e-10
25	RLP7_DEBHA (Q6BIF5) Ribosome biogenesis protein RLP7	58	6e-09
26	RLP7_CANGA (Q6FS36) Ribosome biogenesis protein RLP7	55	3e-08
27	RLP7_YEAST (P40693) Ribosome biogenesis protein RLP7 (Ribosomal ...	54	9e-08
28	RLP7_ASHGO (Q75ET5) Ribosome biogenesis protein RLP7	52	3e-07
29	RLP7_PICJA (P32101) Ribosome biogenesis protein RLP7 (Fragment)	48	7e-06
30	RL30_ARCFU (O28375) 50S ribosomal protein L30P	40	0.001
31	RL30_SULSO (Q9UX86) 50S ribosomal protein L30P	36	0.020
32	RL30_SULAC (O05642) 50S ribosomal protein L30P	35	0.044
33	DYH11_HUMAN (Q96DT5) Ciliary dynein heavy chain 11 (Axonemal bet...	33	0.13
34	RL30_METVA (P14035) 50S ribosomal protein L30P	33	0.17
35	RL30_AERPE (Q9YF96) 50S ribosomal protein L30P	33	0.17
36	RL30_METTH (O26132) 50S ribosomal protein L30P	32	0.28
37	RL30_PYRHO (O59440) 50S ribosomal protein L30P	32	0.37
38	RL30_PYRFU (Q9HH78) 50S ribosomal protein L30P (PfL30)	32	0.37
39	RL30_PYRAB (Q9V1V6) 50S ribosomal protein L30P	32	0.37
40	RL30_METJA (P54046) 50S ribosomal protein L30P	31	0.82
41	NUD17_HUMAN (P0C025) Putative nucleoside diphosphate-linked moie...	30	1.8
42	RL30_HALMA (P14121) 50S ribosomal protein L30P (Hmal30) (Hl20) (...	30	1.8
43	VEXE_SALTI (P43112) Vi polysaccharide export protein vexE	29	2.4
44	CLPB_RHOBA (Q7UM33) Chaperone clpB	29	2.4
45	PPID_BOVIN (P26882) 40 kDa peptidyl-prolyl cis-trans isomerase (...	29	3.1
46	TYPH_SHEON (Q8EHK3) Thymidine phosphorylase (EC 2.4.2.4) (TdRPase)	28	4.1
47	PPID_HUMAN (Q08752) 40 kDa peptidyl-prolyl cis-trans isomerase (...	28	4.1
48	SYA_MANSM (Q65VQ5) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-...	28	4.1
49	NU5M_STRPU (P15552) NADH-ubiquinone oxidoreductase chain 5 (EC 1...	28	4.1
50	QUEA_NITEU (Q82VF1) S-adenosylmethionine:tRNA ribosyltransferase...	28	5.3
51	AMPM_RICPR (Q9ZCD3) Methionine aminopeptidase (EC 3.4.11.18) (MA...	28	5.3
52	SYV_METKA (Q8TVG5) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--t...	28	5.3
53	BPHY_PSEAE (Q9HWR3) Probable bacteriophytochrome (EC 2.7.13.3) (...	28	5.3
54	TRHDE_HUMAN (Q9UKU6) Thyrotropin-releasing hormone degrading ect...	28	7.0
55	LACG_STRMU (P50978) 6-phospho-beta-galactosidase (EC 3.2.1.85) (...	28	7.0
56	HXK2_ARATH (P93834) Hexokinase-2 (EC 2.7.1.1)	28	7.0
57	PTPA2_ASHGO (Q75BY1) Serine/threonine-protein phosphatase 2A act...	27	9.1
58	TRUA_FRATT (Q5NG36) tRNA pseudouridine synthase A (EC 5.4.99.12)...	27	9.1
59	Y445_MYCPN (P75334) Hypothetical lipoprotein MG309 homolog precu...	27	9.1
60	MUTB_MYCTU (P65487) Probable methylmalonyl-CoA mutase large subu...	27	9.1
61	MUTB_MYCBO (P65488) Probable methylmalonyl-CoA mutase large subu...	27	9.1

>RL72_ARATH (P60039) 60S ribosomal protein L7-2|
          Length = 242

 Score =  176 bits (447), Expect(2) = 8e-46
 Identities = 84/105 (80%), Positives = 97/105 (92%)
 Frame = +2

Query: 41  KVIYARAQQYAGEYEAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKK 220
           K+I+ RA+QYA EY  +D EL++LKREA++KGGFYV PEAKLLF++RIRGINA+ PKTKK
Sbjct: 42  KLIFKRAEQYAKEYAEKDNELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKK 101

Query: 221 ILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRE 355
           ILQLLRLRQIFNGVFLKVNKAT+NMLRRVEPYV YGYPNLKSV+E
Sbjct: 102 ILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVTYGYPNLKSVKE 146



 Score = 25.0 bits (53), Expect(2) = 8e-46
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +3

Query: 357 LIYKRGYGKL 386
           LIYKRGYGKL
Sbjct: 147 LIYKRGYGKL 156

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>RL73_ARATH (Q9LHP1) 60S ribosomal protein L7-3|
          Length = 244

 Score =  177 bits (448), Expect(2) = 2e-45
 Identities = 84/105 (80%), Positives = 99/105 (94%)
 Frame = +2

Query: 41  KVIYARAQQYAGEYEAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKK 220
           K+I+ RA+QY+ EY+ +++EL+QLKREA++KGGFYV PEAKLLF++RIRGINA+ PKTKK
Sbjct: 44  KLIFNRAKQYSKEYQEKERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKK 103

Query: 221 ILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRE 355
           ILQLLRLRQIFNGVFLKVNKATINMLRRVEPYV YGYPNLKSV+E
Sbjct: 104 ILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKE 148



 Score = 23.5 bits (49), Expect(2) = 2e-45
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +3

Query: 357 LIYKRGYGKL 386
           LIYKRG+GKL
Sbjct: 149 LIYKRGFGKL 158

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>RL71_ARATH (P60040) 60S ribosomal protein L7-1|
          Length = 242

 Score =  175 bits (443), Expect(2) = 2e-45
 Identities = 83/107 (77%), Positives = 98/107 (91%)
 Frame = +2

Query: 35  NTKVIYARAQQYAGEYEAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKT 214
           N K+I+ RA+QY+ EY  ++KEL+ LKREA++KGGFYV PEAKLLF++RIRGINA+ PKT
Sbjct: 40  NRKLIFKRAEQYSKEYAEKEKELISLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKT 99

Query: 215 KKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRE 355
           KKILQLLRLRQIFNGVFLKVNKAT+NMLRRVEPYV YG+PNLKSV+E
Sbjct: 100 KKILQLLRLRQIFNGVFLKVNKATMNMLRRVEPYVTYGFPNLKSVKE 146



 Score = 25.0 bits (53), Expect(2) = 2e-45
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +3

Query: 357 LIYKRGYGKL 386
           LIYKRGYGKL
Sbjct: 147 LIYKRGYGKL 156

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>RL7_MOUSE (P14148) 60S ribosomal protein L7|
          Length = 270

 Score =  132 bits (333), Expect(2) = 2e-32
 Identities = 64/105 (60%), Positives = 80/105 (76%)
 Frame = +2

Query: 41  KVIYARAQQYAGEYEAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKK 220
           K+IY +A+ Y  EY    +  +++ R AR  G FYV  E KL FV+RIRGIN + PK +K
Sbjct: 70  KLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRK 129

Query: 221 ILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRE 355
           +LQLLRLRQIFNG F+K+NKA+INMLR VEPY+A+GYPNLKSV E
Sbjct: 130 VLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNE 174



 Score = 24.3 bits (51), Expect(2) = 2e-32
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +3

Query: 357 LIYKRGYGKL 386
           LIYKRGYGK+
Sbjct: 175 LIYKRGYGKI 184

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>RL7_HUMAN (P18124) 60S ribosomal protein L7|
          Length = 248

 Score =  132 bits (333), Expect(2) = 2e-32
 Identities = 64/105 (60%), Positives = 80/105 (76%)
 Frame = +2

Query: 41  KVIYARAQQYAGEYEAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKK 220
           K+IY +A+ Y  EY    +  +++ R AR  G FYV  E KL FV+RIRGIN + PK +K
Sbjct: 48  KLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRK 107

Query: 221 ILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRE 355
           +LQLLRLRQIFNG F+K+NKA+INMLR VEPY+A+GYPNLKSV E
Sbjct: 108 VLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNE 152



 Score = 24.3 bits (51), Expect(2) = 2e-32
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +3

Query: 357 LIYKRGYGKL 386
           LIYKRGYGK+
Sbjct: 153 LIYKRGYGKI 162

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>RL7_BOVIN (Q58DT1) 60S ribosomal protein L7|
          Length = 248

 Score =  132 bits (333), Expect(2) = 2e-32
 Identities = 64/105 (60%), Positives = 80/105 (76%)
 Frame = +2

Query: 41  KVIYARAQQYAGEYEAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKK 220
           K+IY +A+ Y  EY    +  +++ R AR  G FYV  E KL FV+RIRGIN + PK +K
Sbjct: 48  KLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRK 107

Query: 221 ILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRE 355
           +LQLLRLRQIFNG F+K+NKA+INMLR VEPY+A+GYPNLKSV E
Sbjct: 108 VLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNE 152



 Score = 24.3 bits (51), Expect(2) = 2e-32
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +3

Query: 357 LIYKRGYGKL 386
           LIYKRGYGK+
Sbjct: 153 LIYKRGYGKI 162

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>RL7_RAT (P05426) 60S ribosomal protein L7|
          Length = 260

 Score =  132 bits (332), Expect(2) = 2e-32
 Identities = 63/105 (60%), Positives = 80/105 (76%)
 Frame = +2

Query: 41  KVIYARAQQYAGEYEAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKK 220
           K+IY +A+ Y  EY    +  +++ R AR  G FYV  E KL FV+RIRGIN + PK +K
Sbjct: 60  KLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRK 119

Query: 221 ILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRE 355
           +LQLLRLRQIFNG F+K+NKA++NMLR VEPY+A+GYPNLKSV E
Sbjct: 120 VLQLLRLRQIFNGTFVKLNKASVNMLRIVEPYIAWGYPNLKSVNE 164



 Score = 24.3 bits (51), Expect(2) = 2e-32
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +3

Query: 357 LIYKRGYGKL 386
           LIYKRGYGK+
Sbjct: 165 LIYKRGYGKI 174

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>RL7_YARLI (Q6C603) 60S ribosomal protein L7|
          Length = 250

 Score =  130 bits (328), Expect(2) = 1e-31
 Identities = 60/105 (57%), Positives = 84/105 (80%)
 Frame = +2

Query: 41  KVIYARAQQYAGEYEAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKK 220
           KVI++RA++Y  EY   ++E ++L+REA++ G FYV  E KL+FV+RI+GI+ M PK +K
Sbjct: 48  KVIFSRAEKYVKEYREAEREQIRLRREAKLNGTFYVPAEPKLVFVIRIKGISKMAPKPRK 107

Query: 221 ILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRE 355
           +LQLLRL QI NGVF+++ KAT  +LR VEPY+A+GYPNL SVR+
Sbjct: 108 VLQLLRLHQINNGVFVRITKATAELLRIVEPYIAFGYPNLASVRQ 152



 Score = 23.5 bits (49), Expect(2) = 1e-31
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = +3

Query: 357 LIYKRGYGKL 386
           L+YKRGYGK+
Sbjct: 153 LVYKRGYGKV 162

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>RL7_DICDI (P11874) 60S ribosomal protein L7|
          Length = 245

 Score =  130 bits (326), Expect = 1e-30
 Identities = 60/104 (57%), Positives = 82/104 (78%)
 Frame = +2

Query: 44  VIYARAQQYAGEYEAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKI 223
           V + RA++Y  EY   ++E ++L R A+  G FYV P AK+ FV+RIRGIN + PK +K+
Sbjct: 46  VYFKRAEKYVSEYHKTEREAIRLNRIAKNSGTFYVPPAAKVAFVIRIRGINGVSPKPRKV 105

Query: 224 LQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRE 355
           L+LLRL Q+ NGVF+K+NKA+INML+ VEPYVAYG+PNLKS++E
Sbjct: 106 LKLLRLLQLNNGVFVKLNKASINMLKLVEPYVAYGFPNLKSIKE 149

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>RL7_DROME (P32100) 60S ribosomal protein L7|
          Length = 252

 Score =  127 bits (319), Expect = 6e-30
 Identities = 62/100 (62%), Positives = 78/100 (78%)
 Frame = +2

Query: 56  RAQQYAGEYEAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLL 235
           RA++Y  EY   ++  ++L+R A+ +  FYV  EAKL FVVRIRGIN + PK +K+LQL 
Sbjct: 56  RAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPKVRKVLQLF 115

Query: 236 RLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRE 355
           RLRQI NGVF+K+NKATINMLR  EPY+ +GYPNLKSVRE
Sbjct: 116 RLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRE 155

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>RL7_NEUCR (Q7SBD5) 60S ribosomal protein L7|
          Length = 248

 Score =  124 bits (311), Expect(2) = 8e-30
 Identities = 59/104 (56%), Positives = 81/104 (77%)
 Frame = +2

Query: 44  VIYARAQQYAGEYEAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKI 223
           VI+ RA+ Y  EY   ++E ++L+R A+  G F++  EAKL+F++RI+GIN + PK +KI
Sbjct: 48  VIFKRAETYVKEYRDVEREKIRLQRAAKQDGSFHIPAEAKLIFLIRIKGINKIPPKPRKI 107

Query: 224 LQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRE 355
           LQLLRL QI NGVF++V KAT  M++ VEP+VAYGYPNLKSV+E
Sbjct: 108 LQLLRLLQINNGVFVRVTKATAEMIKIVEPWVAYGYPNLKSVKE 151



 Score = 23.9 bits (50), Expect(2) = 8e-30
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +3

Query: 357 LIYKRGYGKL 386
           LIYKRGYGK+
Sbjct: 152 LIYKRGYGKV 161

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>RL7_CAEEL (O01802) 60S ribosomal protein L7|
          Length = 244

 Score =  127 bits (319), Expect(2) = 8e-30
 Identities = 61/102 (59%), Positives = 79/102 (77%)
 Frame = +2

Query: 50  YARAQQYAGEYEAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQ 229
           + RA++Y  EY    KE ++LKREA  KG FYV  E K+ FVVRIRGIN +HPK +K LQ
Sbjct: 47  FKRAEKYVQEYRNAQKEGLRLKREAEAKGDFYVPAEHKVAFVVRIRGINQLHPKPRKALQ 106

Query: 230 LLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRE 355
           +LRLRQI NGVF+K+NKAT+ +LR +EPYVA+GYPN K++ +
Sbjct: 107 ILRLRQINNGVFVKLNKATLPLLRIIEPYVAWGYPNNKTIHD 148



 Score = 20.8 bits (42), Expect(2) = 8e-30
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 357 LIYKRGYGKL 386
           L+YKRGY K+
Sbjct: 149 LLYKRGYAKV 158

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>RL7C_SCHPO (O60143) 60S ribosomal protein L7-C|
          Length = 251

 Score =  123 bits (308), Expect(2) = 8e-29
 Identities = 61/105 (58%), Positives = 79/105 (75%)
 Frame = +2

Query: 41  KVIYARAQQYAGEYEAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKK 220
           ++I  RA+ Y  EY   ++E ++L R+AR +G +YV  E KL+FV+RIRGIN + PK +K
Sbjct: 50  ELIAKRAESYDAEYRKAEREQIELGRKARAEGNYYVPDETKLVFVIRIRGINNIPPKARK 109

Query: 221 ILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRE 355
           I+QLLRL QI NGVF+K NKAT  ML+ VEPYV YG PNLK+VRE
Sbjct: 110 IMQLLRLIQINNGVFVKFNKATKEMLQVVEPYVTYGIPNLKTVRE 154



 Score = 21.6 bits (44), Expect(2) = 8e-29
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +3

Query: 357 LIYKRGYGKL 386
           L+YKRG+GK+
Sbjct: 155 LLYKRGFGKV 164

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>RL7B_SCHPO (P25457) 60S ribosomal protein L7-B|
          Length = 250

 Score =  119 bits (297), Expect(2) = 9e-28
 Identities = 59/105 (56%), Positives = 78/105 (74%)
 Frame = +2

Query: 41  KVIYARAQQYAGEYEAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKK 220
           ++I  RA+ Y  EY A ++E ++L R+AR +G ++V  E KL+FVVRIRGIN + PK +K
Sbjct: 49  ELIAKRAEAYEAEYRAAEREQIELARKARAEGNYFVPHEPKLIFVVRIRGINNIPPKARK 108

Query: 221 ILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRE 355
           I+QLLRL QI NG+F+K NKA   ML+ VEPYV YG PN K+VRE
Sbjct: 109 IMQLLRLLQINNGIFVKFNKAIKEMLQVVEPYVTYGIPNHKTVRE 153



 Score = 22.3 bits (46), Expect(2) = 9e-28
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = +3

Query: 357 LIYKRGYGKL 386
           LIYKRG+GK+
Sbjct: 154 LIYKRGFGKV 163

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>RL7_ASHGO (Q755A7) 60S ribosomal protein L7|
          Length = 243

 Score =  117 bits (292), Expect(2) = 1e-27
 Identities = 55/103 (53%), Positives = 75/103 (72%)
 Frame = +2

Query: 47  IYARAQQYAGEYEAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKIL 226
           I  R   Y  EYE  ++ ++Q KREA+  G +YV  + KL+FV+RI+GIN + PK +K+L
Sbjct: 43  ILERNAAYHKEYETAERAVIQAKREAKANGSYYVESQPKLVFVIRIKGINKIAPKPRKVL 102

Query: 227 QLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRE 355
           QLLRL QI +GVF+KV KAT  +LR VEPYVAYGYP+  ++R+
Sbjct: 103 QLLRLNQINSGVFVKVTKATTELLRLVEPYVAYGYPSYSTIRQ 145



 Score = 23.9 bits (50), Expect(2) = 1e-27
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = +3

Query: 357 LIYKRGYGKL 386
           L+YKRGYGK+
Sbjct: 146 LVYKRGYGKI 155

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>RL7B_YEAST (Q12213) 60S ribosomal protein L7-B (L6B) (YL8B)|
          Length = 243

 Score =  114 bits (284), Expect(2) = 3e-26
 Identities = 51/104 (49%), Positives = 76/104 (73%)
 Frame = +2

Query: 44  VIYARAQQYAGEYEAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKI 223
           +I  R   Y  EYE  ++ ++Q KR+A+  G +YV  + KL+FVVRI+GIN + PK +K+
Sbjct: 42  IILERNAAYQKEYETAERNIIQAKRDAKAAGSYYVEAQHKLVFVVRIKGINKIPPKPRKV 101

Query: 224 LQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRE 355
           LQLLRL +I +G F+KV KAT+ +L+ +EPYVAYGYP+  ++R+
Sbjct: 102 LQLLRLTRINSGTFVKVTKATLELLKLIEPYVAYGYPSYSTIRQ 145



 Score = 22.3 bits (46), Expect(2) = 3e-26
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +3

Query: 357 LIYKRGYGKL 386
           L+YKRG+GK+
Sbjct: 146 LVYKRGFGKI 155

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>RL7A_YEAST (P05737) 60S ribosomal protein L7-A (L6A) (YL8A) (RP11)|
          Length = 243

 Score =  114 bits (284), Expect(2) = 3e-26
 Identities = 51/104 (49%), Positives = 76/104 (73%)
 Frame = +2

Query: 44  VIYARAQQYAGEYEAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKI 223
           +I  R   Y  EYE  ++ ++Q KR+A+  G +YV  + KL+FVVRI+GIN + PK +K+
Sbjct: 42  IILERNAAYQKEYETAERNIIQAKRDAKAAGSYYVEAQHKLVFVVRIKGINKIPPKPRKV 101

Query: 224 LQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRE 355
           LQLLRL +I +G F+KV KAT+ +L+ +EPYVAYGYP+  ++R+
Sbjct: 102 LQLLRLTRINSGTFVKVTKATLELLKLIEPYVAYGYPSYSTIRQ 145



 Score = 22.3 bits (46), Expect(2) = 3e-26
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +3

Query: 357 LIYKRGYGKL 386
           L+YKRG+GK+
Sbjct: 146 LVYKRGFGKI 155

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>RL7_DEBHA (Q6BTA4) 60S ribosomal protein L7|
          Length = 241

 Score =  114 bits (284), Expect(2) = 4e-26
 Identities = 52/104 (50%), Positives = 76/104 (73%)
 Frame = +2

Query: 41  KVIYARAQQYAGEYEAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKK 220
           K+I+ RA  Y  EY   ++ +++ KR+A+  G +YV  + KL+FVVRI+GIN + PK +K
Sbjct: 40  KIIFDRAAAYQKEYTDAERAVIKAKRDAKAAGSYYVDAQPKLVFVVRIKGINKIAPKPRK 99

Query: 221 ILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVR 352
           +LQLLRL QI  GVF+++ KAT  +L+  EPY+AYGYPNL ++R
Sbjct: 100 VLQLLRLTQINAGVFVRLTKATSELLKLAEPYIAYGYPNLSTIR 143



 Score = 21.9 bits (45), Expect(2) = 4e-26
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +3

Query: 357 LIYKRGYGKL 386
           L+YKRG+GK+
Sbjct: 145 LVYKRGHGKI 154

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>RL7_CANGA (Q6FSN6) 60S ribosomal protein L7|
          Length = 244

 Score =  112 bits (279), Expect(2) = 1e-25
 Identities = 53/103 (51%), Positives = 74/103 (71%)
 Frame = +2

Query: 47  IYARAQQYAGEYEAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKIL 226
           I  R   +  EYEA ++ ++  KREA+  G +YV  + KL+FVVRI+GIN + PK +K+L
Sbjct: 44  ILERNAAHQKEYEAAERAVIDAKREAKASGSYYVEAQPKLVFVVRIKGINKIPPKPRKVL 103

Query: 227 QLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRE 355
           QLLRL QI +G F+KV KAT  +L+ +EPYVAYGYP+  +VR+
Sbjct: 104 QLLRLTQINSGTFVKVTKATSELLKLIEPYVAYGYPSYSTVRQ 146



 Score = 21.9 bits (45), Expect(2) = 1e-25
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +3

Query: 357 LIYKRGYGKL 386
           L+YKRG+GK+
Sbjct: 147 LVYKRGHGKI 156

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>RL7A_SCHPO (P17937) 60S ribosomal protein L7-A|
          Length = 249

 Score =  109 bits (273), Expect(2) = 4e-25
 Identities = 54/107 (50%), Positives = 72/107 (67%)
 Frame = +2

Query: 35  NTKVIYARAQQYAGEYEAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKT 214
           N K  + RA+ +   Y  +++E ++L R A+ KG  +V  E KLLFV+RI G+  M PK 
Sbjct: 46  NRKETFKRAETFINNYRQRERERIRLNRSAKNKGDIFVPDETKLLFVIRIAGVKNMPPKI 105

Query: 215 KKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRE 355
           +K+L+LLRL +I N VF++ NKA   MLR VEPYV YG PNL SVRE
Sbjct: 106 RKVLRLLRLSRINNAVFVRNNKAVAQMLRIVEPYVMYGIPNLHSVRE 152



 Score = 22.7 bits (47), Expect(2) = 4e-25
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = +3

Query: 357 LIYKRGYGKL 386
           LIYKRG+GK+
Sbjct: 153 LIYKRGFGKI 162

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>RL7L_PONPY (Q5RAH8) Ribosomal protein L7-like 1|
          Length = 246

 Score = 75.5 bits (184), Expect = 3e-14
 Identities = 39/102 (38%), Positives = 62/102 (60%)
 Frame = +2

Query: 50  YARAQQYAGEYEAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQ 229
           + R + +  +   Q +++V+L+R         +  +  L FVVRI  I+ +    ++ + 
Sbjct: 49  FKRLESFLHDSWRQKRDMVRLRRLEMKPHALELPDKHSLAFVVRIERIDGVSLLVQRTIA 108

Query: 230 LLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRE 355
            LRL++IF+GVF+KV    + MLR VEPYV +G+PNLKSVRE
Sbjct: 109 RLRLKKIFSGVFVKVTPQNLKMLRIVEPYVTWGFPNLKSVRE 150

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>RL7L_HUMAN (Q6DKI1) Ribosomal protein L7-like 1|
          Length = 246

 Score = 73.2 bits (178), Expect = 1e-13
 Identities = 39/102 (38%), Positives = 61/102 (59%)
 Frame = +2

Query: 50  YARAQQYAGEYEAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQ 229
           + R + +  +   Q ++ V+L+R         +  +  L FVVRI  I+ +    ++ + 
Sbjct: 49  FKRLESFLHDSWRQKRDKVRLRRLEVKPHALELPDKHSLAFVVRIERIDGVSLLVQRTIA 108

Query: 230 LLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRE 355
            LRL++IF+GVF+KV    + MLR VEPYV +G+PNLKSVRE
Sbjct: 109 RLRLKKIFSGVFVKVTPQNLKMLRIVEPYVTWGFPNLKSVRE 150

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>RL7_ENCCU (Q8SS93) 60S ribosomal protein L7|
          Length = 239

 Score = 63.9 bits (154), Expect = 9e-11
 Identities = 34/108 (31%), Positives = 65/108 (60%)
 Frame = +2

Query: 32  SNTKVIYARAQQYAGEYEAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPK 211
           +N +      ++   +Y  Q++E+  L++++ MK GFYV  EA+   V+ IR      PK
Sbjct: 39  ANARYAEETTEKLLNKYYEQEREI--LEKKSSMKNGFYVPKEAEFFAVILIRSKCNCPPK 96

Query: 212 TKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRE 355
            +K+L+L RL++I   V ++ NK+T  ML+ ++ +VA+G   ++ +R+
Sbjct: 97  VRKVLELFRLKRINTCVLVRNNKSTRKMLQIIKDHVAFGTIGMELLRK 144

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>RLP7_KLULA (P32102) Ribosome biogenesis protein RLP7|
          Length = 318

 Score = 61.2 bits (147), Expect = 6e-10
 Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
 Frame = +2

Query: 29  PSNTKVIYARAQQYAGEYEAQDKELVQLKREARMKGGFY-----VSPEAKLLFVVRIRGI 193
           PS+   I   +++ AG     + EL  +  E     G          E  LLFV+R++G 
Sbjct: 87  PSDRDFILRISEREAGSKATSESELQDVDEEDEEDDGLIREKIVYDGEPSLLFVIRVKGP 146

Query: 194 NAMH--PKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVR 352
            A+    K  K+L LLRL ++  GVF+K+ K    +L+ V PY+  G P+L S+R
Sbjct: 147 TAVKIPAKAYKVLSLLRLVELNTGVFIKLTKDVYPLLKLVSPYIVIGQPSLASIR 201

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>RLP7_DEBHA (Q6BIF5) Ribosome biogenesis protein RLP7|
          Length = 275

 Score = 57.8 bits (138), Expect = 6e-09
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 13/115 (11%)
 Frame = +2

Query: 50  YARAQQYAGEYEAQDKELVQLKREARMKGGFYVSP---------EAKLLFVVRI----RG 190
           + RA+     Y++ + E  ++K   + +                 AKLLF++RI    +G
Sbjct: 47  FVRAETLVSNYKSNELENKRIKHITKFEKQLQADKISQAKEDDESAKLLFIIRIPDHTKG 106

Query: 191 INAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRE 355
           +  +  K +K+L LLRL +   GVF+K+  AT+ +L+ + PY+  G P+L S+R+
Sbjct: 107 LK-VPSKARKVLHLLRLNRPNTGVFVKLTPATVPLLKLISPYIVAGKPSLNSIRK 160

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>RLP7_CANGA (Q6FS36) Ribosome biogenesis protein RLP7|
          Length = 317

 Score = 55.5 bits (132), Expect = 3e-08
 Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
 Frame = +2

Query: 155 EAKLLFVVRIRG-INAMHP-KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYG 328
           E +LLFV+R++G + A  P K  +IL  LRL ++   VF+K+ + T ++L+ + PYV  G
Sbjct: 133 EEQLLFVLRVKGPVAASIPHKAYRILSTLRLEEVNTAVFIKLTETTFSLLKIIAPYVIVG 192

Query: 329 YPNLKSVR 352
            P+LKS+R
Sbjct: 193 KPSLKSIR 200

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>RLP7_YEAST (P40693) Ribosome biogenesis protein RLP7 (Ribosomal protein|
           L7-like)
          Length = 322

 Score = 53.9 bits (128), Expect = 9e-08
 Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
 Frame = +2

Query: 164 LLFVVRIRGINAMHPKTK--KILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPN 337
           LLF+VR+RG  A++   K  KIL LLRL +   GVF+K+ K    +L+ + PYV  G P+
Sbjct: 141 LLFIVRVRGPLAVNIPNKAFKILSLLRLVETNTGVFVKLTKNVYPLLKVIAPYVVIGKPS 200

Query: 338 LKSVR 352
           L S+R
Sbjct: 201 LSSIR 205

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>RLP7_ASHGO (Q75ET5) Ribosome biogenesis protein RLP7|
          Length = 293

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
 Frame = +2

Query: 158 AKLLFVVRIRGINA--MHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGY 331
           A LLFVVR+RG  A  +  K  ++L LLRL ++  GVF+++      +L+ V PYV  G 
Sbjct: 110 ATLLFVVRVRGPAAAKIPRKAHRVLTLLRLAEVNTGVFVRLTAEVFPLLQVVAPYVVVGR 169

Query: 332 PNLKSVR 352
           P+L S+R
Sbjct: 170 PSLASIR 176

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>RLP7_PICJA (P32101) Ribosome biogenesis protein RLP7 (Fragment)|
          Length = 212

 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
 Frame = +2

Query: 149 SPEAKLLFVVRIRG-INAMHP-KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVA 322
           S +  L  +VR  G + A  P K +K+LQLLRL +I +GVF+K+ +    +L+ + PY  
Sbjct: 27  SGKPTLYLIVRTPGPVGAKIPSKVQKVLQLLRLNKINSGVFVKLTETVYPLLKLLSPYTV 86

Query: 323 YGYPNLKSVRE 355
              P+L++VR+
Sbjct: 87  IXQPSLQTVRQ 97

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>RL30_ARCFU (O28375) 50S ribosomal protein L30P|
          Length = 152

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 22/59 (37%), Positives = 37/59 (62%)
 Frame = +2

Query: 173 VVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSV 349
           VVR+RG   +H K K+ L++LRL + ++ V +    +   ML+ V+ YVAYG  N +++
Sbjct: 4   VVRMRGTVDVHRKIKETLKMLRLHKRYHCVVIPDTPSYRGMLQVVKDYVAYGEINAETL 62

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>RL30_SULSO (Q9UX86) 50S ribosomal protein L30P|
          Length = 158

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 19/56 (33%), Positives = 29/56 (51%)
 Frame = +2

Query: 161 KLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYG 328
           +LL ++RIRG         + L +LRLR  FN +        + ML +V PY+ +G
Sbjct: 3   ELLGIIRIRGWAKAPWYINETLNMLRLRYNFNTMVYPKTSQILGMLNKVSPYITWG 58

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>RL30_SULAC (O05642) 50S ribosomal protein L30P|
          Length = 156

 Score = 35.0 bits (79), Expect = 0.044
 Identities = 21/64 (32%), Positives = 33/64 (51%)
 Frame = +2

Query: 161 KLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNL 340
           +L+ V+RIRG  A     +  L +LRL+  FN +    + +   ML  V  YV +G  N 
Sbjct: 3   ELIGVIRIRGWAATPWYIQDTLSMLRLKNAFNAMIYPKDSSIQGMLNLVSSYVTWGELND 62

Query: 341 KSVR 352
           + +R
Sbjct: 63  EGLR 66

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>DYH11_HUMAN (Q96DT5) Ciliary dynein heavy chain 11 (Axonemal beta dynein heavy|
           chain 11)
          Length = 4523

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 23/98 (23%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
 Frame = +2

Query: 29  PSNTKVIYARAQQYAGEYEAQDKELVQLKREARMKGGFYVSPEAKLLF-VVRIRGINAMH 205
           PSN ++I    +    E+  Q +E+++     R+  G ++SP+A+L F ++R   ++ ++
Sbjct: 233 PSNERIILHAIESVVIEWSHQIQEIIERDSVQRLLNGLHLSPQAELDFWMMRRENLSCIY 292

Query: 206 -----PKTKKILQLLRLRQ-----IFNGVFLKVNKATI 289
                P   K++++L  +Q         +FL V  A +
Sbjct: 293 DQLQAPVVLKMVKILTTKQSSYFPTLKDIFLAVENALL 330

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>RL30_METVA (P14035) 50S ribosomal protein L30P|
          Length = 154

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 16/52 (30%), Positives = 29/52 (55%)
 Frame = +2

Query: 173 VVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYG 328
           VVR+RG   +       +++LRL ++ + V +  N     M+++V+ YV YG
Sbjct: 5   VVRVRGSVGVRGDIADTMKMLRLHRVNHCVVIPENDHYTGMIKKVKDYVTYG 56

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>RL30_AERPE (Q9YF96) 50S ribosomal protein L30P|
          Length = 162

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = +2

Query: 164 LLFVVRIRGINAMHPKTKKILQLLRLRQIFN-GVFLKVNKATINMLRRVEPYVAYGYPNL 340
           L  V+RIRG   + P   K L LLRLR+ +   ++        +MLR VE +  YG    
Sbjct: 6   LYAVIRIRGTVDVPPDIDKTLYLLRLRRRYTASIYHDSLPGLRDMLRTVEAWTTYG---- 61

Query: 341 KSVREPDLQERLWK 382
             + E  L+E L K
Sbjct: 62  -EIEERVLEELLRK 74

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>RL30_METTH (O26132) 50S ribosomal protein L30P|
          Length = 152

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 14/52 (26%), Positives = 30/52 (57%)
 Frame = +2

Query: 173 VVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYG 328
           VVR+RG   +       +++LRL +I + V ++   + + ML++ + Y+ +G
Sbjct: 4   VVRVRGSAGVRRDIADTMEMLRLNRINHAVLVEDTPSYLGMLQKAKDYITWG 55

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>RL30_PYRHO (O59440) 50S ribosomal protein L30P|
          Length = 155

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 18/62 (29%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
 Frame = +2

Query: 167 LFVVRIRG-INAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLK 343
           L V+RIRG +N   P  +  L +LRL ++ + V +    + + ML++ + Y+ +G  N +
Sbjct: 4   LAVIRIRGRVNVKRP-VRDTLAMLRLHRVNHCVIVDDTPSYLGMLQKAKDYITWGEINAE 62

Query: 344 SV 349
           ++
Sbjct: 63  TL 64

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>RL30_PYRFU (Q9HH78) 50S ribosomal protein L30P (PfL30)|
          Length = 155

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 18/62 (29%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
 Frame = +2

Query: 167 LFVVRIRG-INAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLK 343
           L V+RIRG +N   P  +  L +LRL ++ + V +    + + ML++ + Y+ +G  N +
Sbjct: 4   LAVIRIRGRVNVKRP-VRDTLAMLRLHRVNHCVIVDDTPSYLGMLQKAKDYITWGEINAE 62

Query: 344 SV 349
           ++
Sbjct: 63  TL 64

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>RL30_PYRAB (Q9V1V6) 50S ribosomal protein L30P|
          Length = 155

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 18/62 (29%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
 Frame = +2

Query: 167 LFVVRIRG-INAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLK 343
           L V+RIRG +N   P  +  L +LRL ++ + V +    + + ML++ + Y+ +G  N +
Sbjct: 4   LAVIRIRGRVNVKRP-VRDTLAMLRLHRVNHCVIVDDTPSYLGMLQKAKDYITWGEINAE 62

Query: 344 SV 349
           ++
Sbjct: 63  TL 64

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>RL30_METJA (P54046) 50S ribosomal protein L30P|
          Length = 154

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 16/52 (30%), Positives = 29/52 (55%)
 Frame = +2

Query: 173 VVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYG 328
           V+RIRG   +       L++LRL ++ + V +   +    ML++V+ YV +G
Sbjct: 5   VIRIRGRVGVRRDIADTLKMLRLHKVNHCVIIPETETFKGMLQKVKDYVTWG 56

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>NUD17_HUMAN (P0C025) Putative nucleoside diphosphate-linked moiety X motif 17,|
           mitochondrial precursor (EC 3.6.1.-) (Nudix motif 17)
          Length = 295

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
 Frame = -3

Query: 319 NIWLNPTQHV-------NGGLVDLKEHTIKYLPQTQKLQDLLGLW 206
           N+W+ P  HV       +GGL +L E +  +LPQ Q     LGLW
Sbjct: 120 NLWVPPGGHVELEEELLDGGLRELWEESGLHLPQGQFSWVPLGLW 164

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>RL30_HALMA (P14121) 50S ribosomal protein L30P (Hmal30) (Hl20) (Hl16)|
          Length = 154

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 14/59 (23%), Positives = 32/59 (54%)
 Frame = +2

Query: 173 VVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSV 349
           +V++RG   MH   +  L++L +  + +   +    A   M+ +V  +VA+G P+ +++
Sbjct: 4   LVQLRGEVNMHTDIQDTLEMLNIHHVNHCTLVPETDAYRGMVAKVNDFVAFGEPSQETL 62

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>VEXE_SALTI (P43112) Vi polysaccharide export protein vexE|
          Length = 656

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 41  KVIYARAQQYAGEYEAQDKELVQLKRE 121
           + +YARA +  G+Y A   E VQL RE
Sbjct: 321 RAMYARALRQVGQYTAASDEFVQLARE 347

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>CLPB_RHOBA (Q7UM33) Chaperone clpB|
          Length = 881

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
 Frame = +2

Query: 170  FVVRIRGINAMHP----KTKKILQL----LRLRQIFNGVFLKVNKATINMLRRVEPYVAY 325
            F+ RI      HP    + ++I+QL    LR R   NG+  ++  A I+ +  V    AY
Sbjct: 777  FLNRIDDTVIFHPLQQTQIRRIVQLQLEELRSRLAANGLSFEITDAAIDQIAEVGYDPAY 836

Query: 326  GYPNLKSVREPDLQERLWKA 385
            G   LK V + ++Q  L  A
Sbjct: 837  GARPLKRVIQREVQNPLASA 856

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>PPID_BOVIN (P26882) 40 kDa peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)|
           (PPIase) (Rotamase) (Cyclophilin-40) (CYP-40)
           (Cyclophilin-related protein) (Estrogen receptor-binding
           cyclophilin)
          Length = 369

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 18/47 (38%), Positives = 25/47 (53%)
 Frame = +2

Query: 29  PSNTKVIYARAQQYAGEYEAQDKELVQLKREARMKGGFYVSPEAKLL 169
           PSNTK +Y RAQ + G  E  D+ L  LK+         ++PE K +
Sbjct: 303 PSNTKALYRRAQGWQGLKE-YDQALADLKKAQE------IAPEDKAI 342

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>TYPH_SHEON (Q8EHK3) Thymidine phosphorylase (EC 2.4.2.4) (TdRPase)|
          Length = 443

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
 Frame = -3

Query: 286 GGLVDLKEHTIKYLPQTQKLQDLLG---LWVHSIDTTD 182
           GG VD  E+  KYLPQ+Q ++ +      + HS+DT +
Sbjct: 321 GGPVDFVENYSKYLPQSQIIRPVFADTQGYAHSMDTRE 358

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>PPID_HUMAN (Q08752) 40 kDa peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)|
           (PPIase) (Rotamase) (Cyclophilin-40) (CYP-40)
           (Cyclophilin-related protein)
          Length = 369

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = +2

Query: 29  PSNTKVIYARAQQYAGEYEAQDKELVQLKR 118
           PSNTK +Y RAQ + G  E  D+ L  LK+
Sbjct: 303 PSNTKALYRRAQGWQGLKE-YDQALADLKK 331

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>SYA_MANSM (Q65VQ5) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
            (AlaRS)
          Length = 875

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 22/93 (23%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
 Frame = +2

Query: 32   SNTKVIYARAQQYAGEYEAQDKELVQLKREARMKGGFYVSPEAKLL--FVVRIRGINAMH 205
            S+T  +  + QQ   + +  +KEL QLK +A M+ G  ++  A  +    V ++ ++ + 
Sbjct: 723  SDTASLVEKIQQLQDKAKKAEKELQQLKEKAAMQAGSDLAKSAVKINDISVIVQQLDGIE 782

Query: 206  PKTKKILQLLRLRQIFNG--VFLKVNKATINML 298
             K+ +++      Q+ +G  VF  V +  +N++
Sbjct: 783  TKSLRVMVDDLKNQLGSGVIVFASVVEDKVNLI 815

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>NU5M_STRPU (P15552) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 5)
          Length = 637

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 18/43 (41%), Positives = 25/43 (58%)
 Frame = -1

Query: 318 TYGSTRRSMLMVALLTLRNTPLNICLKRKSCKIFLVFGCIALI 190
           T  ++ +S+ +   L L NTPLNI L     + FLVF  +ALI
Sbjct: 85  TCNNSIQSINITLSLWLSNTPLNISLNFIYDQYFLVFLSVALI 127

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>QUEA_NITEU (Q82VF1) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC|
           5.-.-.-) (Queuosine biosynthesis protein queA)
          Length = 353

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -3

Query: 355 LPDTLEVRVPVSNIWLNPTQHVNGGLVDLKEHTIKYLPQTQKLQDLLGL 209
           LPD L  + P++N   +   +VNG   DL++   + LP   K  D++ L
Sbjct: 19  LPDELIAQFPLANRSDSRMLYVNGKHADLRDAAFRNLPDYLKRGDVIVL 67

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>AMPM_RICPR (Q9ZCD3) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase|
           M)
          Length = 259

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +2

Query: 68  YAGEYEAQDKELVQLKREARMKGGFYVSPEAKL 166
           Y G+   + K L+Q+  +A MKG   V P AKL
Sbjct: 112 YVGDVAIKPKRLIQVTYDAMMKGIEVVRPGAKL 144

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>SYV_METKA (Q8TVG5) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 914

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +2

Query: 74  GEYEAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGIN 196
           GE    D+E V ++ E R+KGG   + E +   VV IRG++
Sbjct: 873 GEKVVLDEECVDVEWELRVKGGEGKAVEIRPGVVVEIRGLS 913

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>BPHY_PSEAE (Q9HWR3) Probable bacteriophytochrome (EC 2.7.13.3)|
           (Phytochrome-like protein)
          Length = 728

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/64 (25%), Positives = 33/64 (51%)
 Frame = -3

Query: 298 QHVNGGLVDLKEHTIKYLPQTQKLQDLLGLWVHSIDTTDTDNKQQLCLRTDIEPTLHPGL 119
           QH++     + E  +  +    +LQ  +GL V+ +DT  +   +Q+   TD+    +PGL
Sbjct: 541 QHISASSSRM-ERLVSQILDMSRLQSGIGLTVNPVDTDVSQLVRQIVCETDV---AYPGL 596

Query: 118 TLKL 107
            +++
Sbjct: 597 VIEI 600

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>TRHDE_HUMAN (Q9UKU6) Thyrotropin-releasing hormone degrading ectoenzyme (EC|
           3.4.19.6) (TRH-degrading ectoenzyme) (TRH-DE)
           (TRH-specific aminopeptidase) (Thyroliberinase)
           (Pyroglutamyl-peptidase II) (PAP-II)
          Length = 1024

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 12/42 (28%), Positives = 25/42 (59%)
 Frame = +2

Query: 173 VVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINML 298
           V+ + G+ + HP ++++LQ   + ++F+ +  K   A I ML
Sbjct: 496 VMLLDGLASSHPVSQEVLQATDIDRVFDWIAYKKGAALIRML 537

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>LACG_STRMU (P50978) 6-phospho-beta-galactosidase (EC 3.2.1.85)|
           (Beta-D-phosphogalactoside galactohydrolase) (PGALase)
           (P-beta-Gal) (PBG)
          Length = 468

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 6/40 (15%)
 Frame = -3

Query: 292 VNGGLVDLKEHTIKYLPQTQKLQDLLGL------WVHSID 191
           VNGG +DL+E     L   + L D LG+      W+ + D
Sbjct: 269 VNGGQLDLREEDFAALEAAKDLNDFLGINYYMSDWMRAFD 308

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>HXK2_ARATH (P93834) Hexokinase-2 (EC 2.7.1.1)|
          Length = 502

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
 Frame = +2

Query: 101 LVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLL--RLRQIF--NGVFL 268
           L+++  EA   G   V P+ K+ F++R   ++AMH  T   L+++  +L+ I       L
Sbjct: 331 LLKMAEEAAFFGDI-VPPKLKIPFIIRTPNMSAMHSDTSPDLKVVGSKLKDILEVQTSSL 389

Query: 269 KVNKATINM 295
           K+ K  I++
Sbjct: 390 KMRKVVISL 398

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>PTPA2_ASHGO (Q75BY1) Serine/threonine-protein phosphatase 2A activator 2 (EC|
           5.2.1.8) (Peptidyl-prolyl cis-trans isomerase PTPA-2)
           (PPIase PTPA-2) (Rotamase PTPA-2) (Phosphotyrosyl
           phosphatase activator 2)
          Length = 359

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -1

Query: 219 FLVFGCIALIPRIRTTNS 166
           +L FGCIA I R++TT S
Sbjct: 239 YLYFGCIAFINRVKTTAS 256

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>TRUA_FRATT (Q5NG36) tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine|
           isomerase I) (tRNA pseudouridylate synthase I)
          Length = 258

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +2

Query: 185 RGINAMHPKTKKILQLLRLRQIFNGVFLKVNK 280
           RG+NA+ P+  KIL + ++   FN  F  +N+
Sbjct: 77  RGVNALLPQDIKILAVQQVDNNFNSRFTAINR 108

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>Y445_MYCPN (P75334) Hypothetical lipoprotein MG309 homolog precursor|
           (H08_orf1325)
          Length = 1325

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 16/73 (21%), Positives = 32/73 (43%)
 Frame = +2

Query: 101 LVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNK 280
           L+ L  +   K  F   P+ K         I ++    K+++Q    + +FN   +  NK
Sbjct: 561 LLDLSSDTNNKDNFLSYPQFKKF----ADSIKSIEKDLKELVQAHYKQAVFNETAVAENK 616

Query: 281 ATINMLRRVEPYV 319
            T+ +  R +P++
Sbjct: 617 VTLKLAERNQPFI 629

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>MUTB_MYCTU (P65487) Probable methylmalonyl-CoA mutase large subunit (EC|
           5.4.99.2) (MCM)
          Length = 750

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
 Frame = +2

Query: 62  QQYAGEYEAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTK-------- 217
           +QYAG   A D      +  A  + G  V+ +     +   RG ++ HP+ +        
Sbjct: 103 RQYAGFSTAADSNAFYRRNLAAGQKGLSVAFD-----LATHRGYDSDHPRVQGDVGMAGV 157

Query: 218 KILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVA 322
            I  +L +RQ+F+G+ L     ++ M   V P +A
Sbjct: 158 AIDSILDMRQLFDGIDLSTVSVSMTMNGAVLPILA 192

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>MUTB_MYCBO (P65488) Probable methylmalonyl-CoA mutase large subunit (EC|
           5.4.99.2) (MCM)
          Length = 750

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
 Frame = +2

Query: 62  QQYAGEYEAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTK-------- 217
           +QYAG   A D      +  A  + G  V+ +     +   RG ++ HP+ +        
Sbjct: 103 RQYAGFSTAADSNAFYRRNLAAGQKGLSVAFD-----LATHRGYDSDHPRVQGDVGMAGV 157

Query: 218 KILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVA 322
            I  +L +RQ+F+G+ L     ++ M   V P +A
Sbjct: 158 AIDSILDMRQLFDGIDLSTVSVSMTMNGAVLPILA 192


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,383,528
Number of Sequences: 219361
Number of extensions: 862854
Number of successful extensions: 2537
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 2480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2533
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 1386249648
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result