ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags26h17 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK070098.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040F17, full insert sequence Length = 1946 Score = 815 bits (411), Expect = 0.0 Identities = 591/651 (90%) Strand = Plus / Plus Query: 2 cgcgggagatgtgccggagactcgacgagttcgtcatcgggcagggcaaggctaaaaagg 61 ||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||| Sbjct: 307 cgcgggagatgtgccggaggctcgacgagttcgtcatcgggcaggggaaagctaaaaagg 366 Query: 62 ttctatcagtagccgtatacaaccactacaagagagtatataacgcaactgtacagaaag 121 | | || ||||| |||||||| |||||||||||| |||||||||| ||||||||||||| Sbjct: 367 tcttgtcggtagctgtatacaatcactacaagagaatatataacgcgactgtacagaaag 426 Query: 122 gatctgcggacaattctgggtgtccagacgctgcaaatgatgatcacgataatgtagaga 181 | | | | |||||||||||| | ||||||||||| ||||||||| |||| |||| | Sbjct: 427 ggtgttccaccaattctgggtggctagacgctgcaagtgatgatcaaaataacatagaaa 486 Query: 182 tagataaaagcaatgtacttctgatgggtccaacaggctcaggaaaaacattgcttgcaa 241 |||||||||||||||| ||||| ||||||||||| ||||||||||||||||| || || | Sbjct: 487 tagataaaagcaatgtgcttctaatgggtccaactggctcaggaaaaacattactcgcca 546 Query: 242 aaacattagcacgcattgtaaatgtaccattcgttatagctgatgcgacatcattaacac 301 ||||| |||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 547 aaacactagcacgcattgtaaatgtaccattcattatagctgacgcaacatcattaacac 606 Query: 302 aggctggatatgtaggtgaagatgtagagtcgatactgcagaagttactagtggaggccg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 607 aggctggatatgtaggtgaagatgtagagtcgatactgcagaagttactagtggctgctg 666 Query: 362 aatataatgttcaagctgcccagcaagggatagtgtacatagatgaagtagataaaataa 421 |||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||| Sbjct: 667 aatataatgttcaagctgcccaacaagggatagtgtacatagacgaagtagataagataa 726 Query: 422 caaagaaggcagagagtgcaaacgttagtagagatgtatctggtgaaggtgttcaacagg 481 |||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||| | Sbjct: 727 caaagaaggcagagagtgcaaatgttagcagagatgtatctggggaaggtgttcaacaag 786 Query: 482 ctttgttaaaaatcctagaaggaactgttgtcaccattcctgaaaagggatctcgcaaaa 541 | |||||||||||||||||||||||||||| | ||||||||| |||||||||||||| | Sbjct: 787 cactgttaaaaatcctagaaggaactgttgttagcattcctgagaagggatctcgcaaga 846 Query: 542 attctcgcaatgacagtatacagatagacacaaaagacattcttttcatatgtggtggtg 601 |||| |||||||| || |||||||||||||||||||| |||||||||||||||||||| | Sbjct: 847 attcccgcaatgagagcatacagatagacacaaaagatattcttttcatatgtggtggcg 906 Query: 602 cttttgttgatttggagaagactatttctgaaagacgacaagattcatcta 652 ||||||| || ||||||||||||||||||||||| || ||||||||||||| Sbjct: 907 cttttgtcgacttggagaagactatttctgaaaggcgccaagattcatcta 957
>ref|XM_463564.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1878 Score = 793 bits (400), Expect = 0.0 Identities = 591/654 (90%), Gaps = 3/654 (0%) Strand = Plus / Plus Query: 2 cgcgggagatgtgccggagactcgacgagttcgtcatcgggcagggcaaggctaaaaagg 61 ||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||| Sbjct: 623 cgcgggagatgtgccggaggctcgacgagttcgtcatcgggcaggggaaagctaaaaagg 682 Query: 62 ttctatcagtagccgtatacaaccactacaagagagtatataacgcaactgtacagaaag 121 | | || ||||| |||||||| |||||||||||| |||||||||| ||||||||||||| Sbjct: 683 tcttgtcggtagctgtatacaatcactacaagagaatatataacgcgactgtacagaaag 742 Query: 122 gatctgcggacaattctgggtgtccagacgctgcaaatgatgatcacgataatgtagaga 181 | | | | |||||||||||| | ||||||||||| ||||||||| |||| |||| | Sbjct: 743 ggtgttccaccaattctgggtggctagacgctgcaagtgatgatcaaaataacatagaaa 802 Query: 182 tagataaaagcaatgtacttctgatgggtccaacaggctcaggaaaaacattgcttgcaa 241 |||||||||||||||| ||||| ||||||||||| ||||||||||||||||| || || | Sbjct: 803 tagataaaagcaatgtgcttctaatgggtccaactggctcaggaaaaacattactcgcca 862 Query: 242 aaacattagcacgcattgtaaatgtaccattcgttatagctgatgcgacatcattaacac 301 ||||| |||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 863 aaacactagcacgcattgtaaatgtaccattcattatagctgacgcaacatcattaacac 922 Query: 302 aggc---tggatatgtaggtgaagatgtagagtcgatactgcagaagttactagtggagg 358 |||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 923 aggcagctggatatgtaggtgaagatgtagagtcgatactgcagaagttactagtggctg 982 Query: 359 ccgaatataatgttcaagctgcccagcaagggatagtgtacatagatgaagtagataaaa 418 | ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| | Sbjct: 983 ctgaatataatgttcaagctgcccaacaagggatagtgtacatagacgaagtagataaga 1042 Query: 419 taacaaagaaggcagagagtgcaaacgttagtagagatgtatctggtgaaggtgttcaac 478 ||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1043 taacaaagaaggcagagagtgcaaatgttagcagagatgtatctggggaaggtgttcaac 1102 Query: 479 aggctttgttaaaaatcctagaaggaactgttgtcaccattcctgaaaagggatctcgca 538 | || |||||||||||||||||||||||||||| | ||||||||| ||||||||||||| Sbjct: 1103 aagcactgttaaaaatcctagaaggaactgttgttagcattcctgagaagggatctcgca 1162 Query: 539 aaaattctcgcaatgacagtatacagatagacacaaaagacattcttttcatatgtggtg 598 | ||||| |||||||| || |||||||||||||||||||| ||||||||||||||||||| Sbjct: 1163 agaattcccgcaatgagagcatacagatagacacaaaagatattcttttcatatgtggtg 1222 Query: 599 gtgcttttgttgatttggagaagactatttctgaaagacgacaagattcatcta 652 | |||||||| || ||||||||||||||||||||||| || ||||||||||||| Sbjct: 1223 gcgcttttgtcgacttggagaagactatttctgaaaggcgccaagattcatcta 1276
>gb|AY104201.1| Zea mays PCO093235 mRNA sequence Length = 973 Score = 133 bits (67), Expect = 8e-28 Identities = 232/287 (80%) Strand = Plus / Plus Query: 217 ggctcaggaaaaacattgcttgcaaaaacattagcacgcattgtaaatgtaccattcgtt 276 ||||| || ||||| || |||||||| |||||||| || |||| ||||||||||| || Sbjct: 18 ggctctggtaaaactttacttgcaaagacattagctcgttttgtgaatgtaccatttgta 77 Query: 277 atagctgatgcgacatcattaacacaggctggatatgtaggtgaagatgtagagtcgata 336 || |||||||| ||| |||| || ||||| || |||||||| ||||||||||| || ||| Sbjct: 78 attgctgatgcaacaacattgacccaggcagggtatgtaggagaagatgtagaatctata 137 Query: 337 ctgcagaagttactagtggaggccgaatataatgttcaagctgcccagcaagggatagtg 396 | | |||||||| || ||| || | |||||| ||||| || || |||||||| ||| Sbjct: 138 ttatacaagttactcacggtggcagattttaatgtgcaagcagcacaacaagggatggtg 197 Query: 397 tacatagatgaagtagataaaataacaaagaaggcagagagtgcaaacgttagtagagat 456 |||||||||||||| ||||| || ||||| ||||| || ||| ||| |||| ||||| Sbjct: 198 tacatagatgaagttgataagatcacaaaaaaggctgaaagtcttaacattagcagagac 257 Query: 457 gtatctggtgaaggtgttcaacaggctttgttaaaaatcctagaagg 503 |||||||||||||||||||| ||||| ||| | ||||| || ||||| Sbjct: 258 gtatctggtgaaggtgttcagcaggcattgctgaaaatgctggaagg 304 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 558 tatacagatagacacaaaagacattcttttcatatgtggtggtgcttttgttgatttgga 617 |||||||||||| || ||||| |||||||| ||||||||||||||||| || |||||||| Sbjct: 359 tatacagatagataccaaagatattctttttatatgtggtggtgctttcgtggatttgga 418 Query: 618 gaagactatttctgaaagacgacaagattcatcta 652 || ||||| || || ||||| || |||||||||| Sbjct: 419 aaaaactatatcagagagacggcaggattcatcta 453
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 115 bits (58), Expect = 2e-22 Identities = 67/70 (95%) Strand = Plus / Minus Query: 361 gaatataatgttcaagctgcccagcaagggatagtgtacatagatgaagtagataaaata 420 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||| Sbjct: 38517043 gaatataatgttcaagctgcccaacaagggatagtgtacatagacgaagtagataagata 38516984 Query: 421 acaaagaagg 430 |||||||||| Sbjct: 38516983 acaaagaagg 38516974 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Minus Query: 428 aggcagagagtgcaaacgttagtagagatgtatctggtgaaggtgttcaacaggctttgt 487 |||||||||||||||| ||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 38516909 aggcagagagtgcaaatgttagcagagatgtatctggggaaggtgttcaacaagcactgt 38516850 Query: 488 taaaaatcctagaaggaactgt 509 |||||||||||||||||||||| Sbjct: 38516849 taaaaatcctagaaggaactgt 38516828 Score = 115 bits (58), Expect = 2e-22 Identities = 70/74 (94%) Strand = Plus / Minus Query: 562 cagatagacacaaaagacattcttttcatatgtggtggtgcttttgttgatttggagaag 621 ||||||||||||||||| |||||||||||||||||||| |||||||| || ||||||||| Sbjct: 38515789 cagatagacacaaaagatattcttttcatatgtggtggcgcttttgtcgacttggagaag 38515730 Query: 622 actatttctgaaag 635 |||||||||||||| Sbjct: 38515729 actatttctgaaag 38515716 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Minus Query: 221 caggaaaaacattgcttgcaaaaacattagcacgcattgtaaatgtaccattcgttatag 280 ||||||||||||| || || |||||| |||||||||||||||||||||||||| |||||| Sbjct: 38517389 caggaaaaacattactcgccaaaacactagcacgcattgtaaatgtaccattcattatag 38517330 Query: 281 ctgatgcgacatcattaacacaggc 305 |||| || ||||||||||||||||| Sbjct: 38517329 ctgacgcaacatcattaacacaggc 38517305 Score = 109 bits (55), Expect = 1e-20 Identities = 55/55 (100%) Strand = Plus / Minus Query: 301 caggctggatatgtaggtgaagatgtagagtcgatactgcagaagttactagtgg 355 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38517233 caggctggatatgtaggtgaagatgtagagtcgatactgcagaagttactagtgg 38517179 Score = 97.6 bits (49), Expect = 4e-17 Identities = 58/61 (95%) Strand = Plus / Minus Query: 2 cgcgggagatgtgccggagactcgacgagttcgtcatcgggcagggcaaggctaaaaagg 61 ||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||| Sbjct: 38518959 cgcgggagatgtgccggaggctcgacgagttcgtcatcgggcaggggaaagctaaaaagg 38518900 Query: 62 t 62 | Sbjct: 38518899 t 38518899 Score = 97.6 bits (49), Expect = 4e-17 Identities = 82/93 (88%) Strand = Plus / Minus Query: 132 caattctgggtgtccagacgctgcaaatgatgatcacgataatgtagagatagataaaag 191 |||||||||||| | ||||||||||| ||||||||| |||| |||| ||||||||||| Sbjct: 38517607 caattctgggtggctagacgctgcaagtgatgatcaaaataacatagaaatagataaaag 38517548 Query: 192 caatgtacttctgatgggtccaacaggctcagg 224 |||||| ||||| ||||||||||| |||||||| Sbjct: 38517547 caatgtgcttctaatgggtccaactggctcagg 38517515 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 70 gtagccgtatacaaccactacaagagagtatataacgcaactgtacagaaagg 122 ||||| |||||||| |||||||||||| |||||||||| |||||||||||||| Sbjct: 38517755 gtagctgtatacaatcactacaagagaatatataacgcgactgtacagaaagg 38517703 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 516 cattcctgaaaagggatctcgcaaaaattctcgcaatgacagtatacag 564 ||||||||| |||||||||||||| ||||| |||||||| || |||||| Sbjct: 38516377 cattcctgagaagggatctcgcaagaattcccgcaatgagagcatacag 38516329
>gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJNBa0048I01, complete sequence Length = 193444 Score = 115 bits (58), Expect = 2e-22 Identities = 67/70 (95%) Strand = Plus / Minus Query: 361 gaatataatgttcaagctgcccagcaagggatagtgtacatagatgaagtagataaaata 420 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||| Sbjct: 110135 gaatataatgttcaagctgcccaacaagggatagtgtacatagacgaagtagataagata 110076 Query: 421 acaaagaagg 430 |||||||||| Sbjct: 110075 acaaagaagg 110066 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Minus Query: 428 aggcagagagtgcaaacgttagtagagatgtatctggtgaaggtgttcaacaggctttgt 487 |||||||||||||||| ||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 110001 aggcagagagtgcaaatgttagcagagatgtatctggggaaggtgttcaacaagcactgt 109942 Query: 488 taaaaatcctagaaggaactgt 509 |||||||||||||||||||||| Sbjct: 109941 taaaaatcctagaaggaactgt 109920 Score = 115 bits (58), Expect = 2e-22 Identities = 70/74 (94%) Strand = Plus / Minus Query: 562 cagatagacacaaaagacattcttttcatatgtggtggtgcttttgttgatttggagaag 621 ||||||||||||||||| |||||||||||||||||||| |||||||| || ||||||||| Sbjct: 108881 cagatagacacaaaagatattcttttcatatgtggtggcgcttttgtcgacttggagaag 108822 Query: 622 actatttctgaaag 635 |||||||||||||| Sbjct: 108821 actatttctgaaag 108808 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Minus Query: 221 caggaaaaacattgcttgcaaaaacattagcacgcattgtaaatgtaccattcgttatag 280 ||||||||||||| || || |||||| |||||||||||||||||||||||||| |||||| Sbjct: 110481 caggaaaaacattactcgccaaaacactagcacgcattgtaaatgtaccattcattatag 110422 Query: 281 ctgatgcgacatcattaacacaggc 305 |||| || ||||||||||||||||| Sbjct: 110421 ctgacgcaacatcattaacacaggc 110397 Score = 109 bits (55), Expect = 1e-20 Identities = 55/55 (100%) Strand = Plus / Minus Query: 301 caggctggatatgtaggtgaagatgtagagtcgatactgcagaagttactagtgg 355 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110325 caggctggatatgtaggtgaagatgtagagtcgatactgcagaagttactagtgg 110271 Score = 97.6 bits (49), Expect = 4e-17 Identities = 58/61 (95%) Strand = Plus / Minus Query: 2 cgcgggagatgtgccggagactcgacgagttcgtcatcgggcagggcaaggctaaaaagg 61 ||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||| Sbjct: 112051 cgcgggagatgtgccggaggctcgacgagttcgtcatcgggcaggggaaagctaaaaagg 111992 Query: 62 t 62 | Sbjct: 111991 t 111991 Score = 97.6 bits (49), Expect = 4e-17 Identities = 82/93 (88%) Strand = Plus / Minus Query: 132 caattctgggtgtccagacgctgcaaatgatgatcacgataatgtagagatagataaaag 191 |||||||||||| | ||||||||||| ||||||||| |||| |||| ||||||||||| Sbjct: 110699 caattctgggtggctagacgctgcaagtgatgatcaaaataacatagaaatagataaaag 110640 Query: 192 caatgtacttctgatgggtccaacaggctcagg 224 |||||| ||||| ||||||||||| |||||||| Sbjct: 110639 caatgtgcttctaatgggtccaactggctcagg 110607 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 70 gtagccgtatacaaccactacaagagagtatataacgcaactgtacagaaagg 122 ||||| |||||||| |||||||||||| |||||||||| |||||||||||||| Sbjct: 110847 gtagctgtatacaatcactacaagagaatatataacgcgactgtacagaaagg 110795 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 516 cattcctgaaaagggatctcgcaaaaattctcgcaatgacagtatacag 564 ||||||||| |||||||||||||| ||||| |||||||| || |||||| Sbjct: 109469 cattcctgagaagggatctcgcaagaattcccgcaatgagagcatacag 109421
>dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0434C04 Length = 150064 Score = 115 bits (58), Expect = 2e-22 Identities = 67/70 (95%) Strand = Plus / Minus Query: 361 gaatataatgttcaagctgcccagcaagggatagtgtacatagatgaagtagataaaata 420 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||| Sbjct: 37724 gaatataatgttcaagctgcccaacaagggatagtgtacatagacgaagtagataagata 37665 Query: 421 acaaagaagg 430 |||||||||| Sbjct: 37664 acaaagaagg 37655 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Minus Query: 428 aggcagagagtgcaaacgttagtagagatgtatctggtgaaggtgttcaacaggctttgt 487 |||||||||||||||| ||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 37590 aggcagagagtgcaaatgttagcagagatgtatctggggaaggtgttcaacaagcactgt 37531 Query: 488 taaaaatcctagaaggaactgt 509 |||||||||||||||||||||| Sbjct: 37530 taaaaatcctagaaggaactgt 37509 Score = 115 bits (58), Expect = 2e-22 Identities = 70/74 (94%) Strand = Plus / Minus Query: 562 cagatagacacaaaagacattcttttcatatgtggtggtgcttttgttgatttggagaag 621 ||||||||||||||||| |||||||||||||||||||| |||||||| || ||||||||| Sbjct: 36470 cagatagacacaaaagatattcttttcatatgtggtggcgcttttgtcgacttggagaag 36411 Query: 622 actatttctgaaag 635 |||||||||||||| Sbjct: 36410 actatttctgaaag 36397 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Minus Query: 221 caggaaaaacattgcttgcaaaaacattagcacgcattgtaaatgtaccattcgttatag 280 ||||||||||||| || || |||||| |||||||||||||||||||||||||| |||||| Sbjct: 38070 caggaaaaacattactcgccaaaacactagcacgcattgtaaatgtaccattcattatag 38011 Query: 281 ctgatgcgacatcattaacacaggc 305 |||| || ||||||||||||||||| Sbjct: 38010 ctgacgcaacatcattaacacaggc 37986 Score = 109 bits (55), Expect = 1e-20 Identities = 55/55 (100%) Strand = Plus / Minus Query: 301 caggctggatatgtaggtgaagatgtagagtcgatactgcagaagttactagtgg 355 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37914 caggctggatatgtaggtgaagatgtagagtcgatactgcagaagttactagtgg 37860 Score = 97.6 bits (49), Expect = 4e-17 Identities = 58/61 (95%) Strand = Plus / Minus Query: 2 cgcgggagatgtgccggagactcgacgagttcgtcatcgggcagggcaaggctaaaaagg 61 ||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||| Sbjct: 39640 cgcgggagatgtgccggaggctcgacgagttcgtcatcgggcaggggaaagctaaaaagg 39581 Query: 62 t 62 | Sbjct: 39580 t 39580 Score = 97.6 bits (49), Expect = 4e-17 Identities = 82/93 (88%) Strand = Plus / Minus Query: 132 caattctgggtgtccagacgctgcaaatgatgatcacgataatgtagagatagataaaag 191 |||||||||||| | ||||||||||| ||||||||| |||| |||| ||||||||||| Sbjct: 38288 caattctgggtggctagacgctgcaagtgatgatcaaaataacatagaaatagataaaag 38229 Query: 192 caatgtacttctgatgggtccaacaggctcagg 224 |||||| ||||| ||||||||||| |||||||| Sbjct: 38228 caatgtgcttctaatgggtccaactggctcagg 38196 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 70 gtagccgtatacaaccactacaagagagtatataacgcaactgtacagaaagg 122 ||||| |||||||| |||||||||||| |||||||||| |||||||||||||| Sbjct: 38436 gtagctgtatacaatcactacaagagaatatataacgcgactgtacagaaagg 38384 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 516 cattcctgaaaagggatctcgcaaaaattctcgcaatgacagtatacag 564 ||||||||| |||||||||||||| ||||| |||||||| || |||||| Sbjct: 37058 cattcctgagaagggatctcgcaagaattcccgcaatgagagcatacag 37010
>dbj|AP003379.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408G07 Length = 126631 Score = 115 bits (58), Expect = 2e-22 Identities = 67/70 (95%) Strand = Plus / Minus Query: 361 gaatataatgttcaagctgcccagcaagggatagtgtacatagatgaagtagataaaata 420 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||| Sbjct: 102458 gaatataatgttcaagctgcccaacaagggatagtgtacatagacgaagtagataagata 102399 Query: 421 acaaagaagg 430 |||||||||| Sbjct: 102398 acaaagaagg 102389 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Minus Query: 428 aggcagagagtgcaaacgttagtagagatgtatctggtgaaggtgttcaacaggctttgt 487 |||||||||||||||| ||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 102324 aggcagagagtgcaaatgttagcagagatgtatctggggaaggtgttcaacaagcactgt 102265 Query: 488 taaaaatcctagaaggaactgt 509 |||||||||||||||||||||| Sbjct: 102264 taaaaatcctagaaggaactgt 102243 Score = 115 bits (58), Expect = 2e-22 Identities = 70/74 (94%) Strand = Plus / Minus Query: 562 cagatagacacaaaagacattcttttcatatgtggtggtgcttttgttgatttggagaag 621 ||||||||||||||||| |||||||||||||||||||| |||||||| || ||||||||| Sbjct: 101204 cagatagacacaaaagatattcttttcatatgtggtggcgcttttgtcgacttggagaag 101145 Query: 622 actatttctgaaag 635 |||||||||||||| Sbjct: 101144 actatttctgaaag 101131 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Minus Query: 221 caggaaaaacattgcttgcaaaaacattagcacgcattgtaaatgtaccattcgttatag 280 ||||||||||||| || || |||||| |||||||||||||||||||||||||| |||||| Sbjct: 102804 caggaaaaacattactcgccaaaacactagcacgcattgtaaatgtaccattcattatag 102745 Query: 281 ctgatgcgacatcattaacacaggc 305 |||| || ||||||||||||||||| Sbjct: 102744 ctgacgcaacatcattaacacaggc 102720 Score = 109 bits (55), Expect = 1e-20 Identities = 55/55 (100%) Strand = Plus / Minus Query: 301 caggctggatatgtaggtgaagatgtagagtcgatactgcagaagttactagtgg 355 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102648 caggctggatatgtaggtgaagatgtagagtcgatactgcagaagttactagtgg 102594 Score = 97.6 bits (49), Expect = 4e-17 Identities = 58/61 (95%) Strand = Plus / Minus Query: 2 cgcgggagatgtgccggagactcgacgagttcgtcatcgggcagggcaaggctaaaaagg 61 ||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||| Sbjct: 104374 cgcgggagatgtgccggaggctcgacgagttcgtcatcgggcaggggaaagctaaaaagg 104315 Query: 62 t 62 | Sbjct: 104314 t 104314 Score = 97.6 bits (49), Expect = 4e-17 Identities = 82/93 (88%) Strand = Plus / Minus Query: 132 caattctgggtgtccagacgctgcaaatgatgatcacgataatgtagagatagataaaag 191 |||||||||||| | ||||||||||| ||||||||| |||| |||| ||||||||||| Sbjct: 103022 caattctgggtggctagacgctgcaagtgatgatcaaaataacatagaaatagataaaag 102963 Query: 192 caatgtacttctgatgggtccaacaggctcagg 224 |||||| ||||| ||||||||||| |||||||| Sbjct: 102962 caatgtgcttctaatgggtccaactggctcagg 102930 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 70 gtagccgtatacaaccactacaagagagtatataacgcaactgtacagaaagg 122 ||||| |||||||| |||||||||||| |||||||||| |||||||||||||| Sbjct: 103170 gtagctgtatacaatcactacaagagaatatataacgcgactgtacagaaagg 103118 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 516 cattcctgaaaagggatctcgcaaaaattctcgcaatgacagtatacag 564 ||||||||| |||||||||||||| ||||| |||||||| || |||||| Sbjct: 101792 cattcctgagaagggatctcgcaagaattcccgcaatgagagcatacag 101744
>ref|XM_465056.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1665 Score = 103 bits (52), Expect = 7e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 552 tgacagtatacagatagacacaaaagacattcttttcatatgtggtggtgcttttgttga 611 ||||| ||| ||||| || |||||| ||||||| ||||| |||||||||||||||||||| Sbjct: 999 tgacaatatccagattgatacaaaaaacattctcttcatttgtggtggtgcttttgttga 1058 Query: 612 tttggagaagactatttctgaaag 635 |||||||||||||||||| ||||| Sbjct: 1059 tttggagaagactatttcggaaag 1082 Score = 79.8 bits (40), Expect = 1e-11 Identities = 88/104 (84%) Strand = Plus / Plus Query: 376 gctgcccagcaagggatagtgtacatagatgaagtagataaaataacaaagaaggcagag 435 ||||| ||||||||||| || || || || ||||| |||||||||||||||||||| || Sbjct: 823 gctgctcagcaagggattgtctatattgacgaagttgataaaataacaaagaaggctgaa 882 Query: 436 agtgcaaacgttagtagagatgtatctggtgaaggtgttcaaca 479 || ||| ||||||||||||| || ||||||||||||||||| Sbjct: 883 agcatcaaccttagtagagatgtttcaggtgaaggtgttcaaca 926 Score = 71.9 bits (36), Expect = 3e-09 Identities = 93/112 (83%) Strand = Plus / Plus Query: 203 tgatgggtccaacaggctcaggaaaaacattgcttgcaaaaacattagcacgcattgtaa 262 |||||||||| |||||||| || ||||||||||| |||||||| | ||| | |||| | Sbjct: 650 tgatgggtccgacaggctcggggaaaacattgctggcaaaaacccttgcaaggtttgtga 709 Query: 263 atgtaccattcgttatagctgatgcgacatcattaacacaggctggatatgt 314 |||| ||||| |||||||||||||| ||| | | || |||||||||||||| Sbjct: 710 atgtgccatttgttatagctgatgcaacaaccctcactcaggctggatatgt 761
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 99.6 bits (50), Expect = 1e-17 Identities = 68/74 (91%) Strand = Plus / Minus Query: 562 cagatagacacaaaagacattcttttcatatgtggtggtgcttttgttgatttggagaag 621 ||||| || |||||| ||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 11165593 cagattgatacaaaaaacattctcttcatttgtggtggtgcttttgttgatttggagaag 11165534 Query: 622 actatttctgaaag 635 |||||||| ||||| Sbjct: 11165533 actatttcggaaag 11165520 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Plus Query: 559 atacagatagacacaaaagacattcttttcatatgtggtggtgcttttgttgatttggag 618 ||||||||||| ||||| ||||||||||| || ||||||||||||||| |||| |||||| Sbjct: 21449345 atacagatagatacaaaggacattctttttatttgtggtggtgcttttattgacttggag 21449404 Query: 619 aagactat 626 || ||||| Sbjct: 21449405 aaaactat 21449412 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 446 ttagtagagatgtatctggtgaaggtgttcaacaggctttgttaaaaatcctagaagg 503 ||||||||||||| || ||||||||||| || ||||||||||| ||||| || ||||| Sbjct: 21448355 ttagtagagatgtctccggtgaaggtgtccagcaggctttgttgaaaatgctggaagg 21448412 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 376 gctgcccagcaagggatagtgtacatagatgaagtagataaaataacaaagaagg 430 ||||| ||||||||||| || || || || ||||| ||||||||||||||||||| Sbjct: 11167420 gctgctcagcaagggattgtctatattgacgaagttgataaaataacaaagaagg 11167366 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 446 ttagtagagatgtatctggtgaaggtgttcaaca 479 ||||||||||||| || ||||||||||||||||| Sbjct: 11167276 ttagtagagatgtttcaggtgaaggtgttcaaca 11167243 Score = 48.1 bits (24), Expect = 0.037 Identities = 57/68 (83%) Strand = Plus / Minus Query: 220 tcaggaaaaacattgcttgcaaaaacattagcacgcattgtaaatgtaccattcgttata 279 ||||| ||||||||||| |||||||| | ||| | |||| ||||| ||||| |||||| Sbjct: 11169098 tcagggaaaacattgctggcaaaaacccttgcaaggtttgtgaatgtgccatttgttata 11169039 Query: 280 gctgatgc 287 |||||||| Sbjct: 11169038 gctgatgc 11169031
>dbj|AP003988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1057_D08 Length = 119557 Score = 99.6 bits (50), Expect = 1e-17 Identities = 68/74 (91%) Strand = Plus / Minus Query: 562 cagatagacacaaaagacattcttttcatatgtggtggtgcttttgttgatttggagaag 621 ||||| || |||||| ||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 84772 cagattgatacaaaaaacattctcttcatttgtggtggtgcttttgttgatttggagaag 84713 Query: 622 actatttctgaaag 635 |||||||| ||||| Sbjct: 84712 actatttcggaaag 84699 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 376 gctgcccagcaagggatagtgtacatagatgaagtagataaaataacaaagaagg 430 ||||| ||||||||||| || || || || ||||| ||||||||||||||||||| Sbjct: 86599 gctgctcagcaagggattgtctatattgacgaagttgataaaataacaaagaagg 86545 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 446 ttagtagagatgtatctggtgaaggtgttcaaca 479 ||||||||||||| || ||||||||||||||||| Sbjct: 86455 ttagtagagatgtttcaggtgaaggtgttcaaca 86422 Score = 48.1 bits (24), Expect = 0.037 Identities = 57/68 (83%) Strand = Plus / Minus Query: 220 tcaggaaaaacattgcttgcaaaaacattagcacgcattgtaaatgtaccattcgttata 279 ||||| ||||||||||| |||||||| | ||| | |||| ||||| ||||| |||||| Sbjct: 88277 tcagggaaaacattgctggcaaaaacccttgcaaggtttgtgaatgtgccatttgttata 88218 Query: 280 gctgatgc 287 |||||||| Sbjct: 88217 gctgatgc 88210
>ref|NM_124714.3| Arabidopsis thaliana CLPX; ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding AT5G53350 (CLPX) mRNA, complete cds Length = 2106 Score = 93.7 bits (47), Expect = 7e-16 Identities = 119/143 (83%) Strand = Plus / Plus Query: 364 tataatgttcaagctgcccagcaagggatagtgtacatagatgaagtagataaaataaca 423 ||||||||| |||||| ||||||||||| || ||||| |||||||| || || |||||| Sbjct: 1006 tataatgttgcagctgcacagcaagggattgtttacattgatgaagtcgacaagataaca 1065 Query: 424 aagaaggcagagagtgcaaacgttagtagagatgtatctggtgaaggtgttcaacaggct 483 ||||||||||| || ||| | || ||||||||||| || |||||||||||||| || Sbjct: 1066 aagaaggcagaaagccttaacatcagcagagatgtatcaggagaaggtgttcaacaagca 1125 Query: 484 ttgttaaaaatcctagaaggaac 506 ||| ||||||| || |||||||| Sbjct: 1126 ttgctaaaaatgctggaaggaac 1148 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 552 tgacagtatacagatagacacaaaagacattcttttcatatgtggtggtgcttttgt 608 ||||| ||| |||||||||||||| ||||| || ||||||||||||||||||||||| Sbjct: 1194 tgacaatatccagatagacacaaaggacatactcttcatatgtggtggtgcttttgt 1250
>gb|AY142561.1| Arabidopsis thaliana putative ATP-dependent Clp protease ATP-binding subunit ClpX1 (At5g53350) mRNA, complete cds Length = 1771 Score = 93.7 bits (47), Expect = 7e-16 Identities = 119/143 (83%) Strand = Plus / Plus Query: 364 tataatgttcaagctgcccagcaagggatagtgtacatagatgaagtagataaaataaca 423 ||||||||| |||||| ||||||||||| || ||||| |||||||| || || |||||| Sbjct: 844 tataatgttgcagctgcacagcaagggattgtttacattgatgaagtcgacaagataaca 903 Query: 424 aagaaggcagagagtgcaaacgttagtagagatgtatctggtgaaggtgttcaacaggct 483 ||||||||||| || ||| | || ||||||||||| || |||||||||||||| || Sbjct: 904 aagaaggcagaaagccttaacatcagcagagatgtatcaggagaaggtgttcaacaagca 963 Query: 484 ttgttaaaaatcctagaaggaac 506 ||| ||||||| || |||||||| Sbjct: 964 ttgctaaaaatgctggaaggaac 986 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 552 tgacagtatacagatagacacaaaagacattcttttcatatgtggtggtgcttttgt 608 ||||| ||| |||||||||||||| ||||| || ||||||||||||||||||||||| Sbjct: 1032 tgacaatatccagatagacacaaaggacatactcttcatatgtggtggtgcttttgt 1088
>gb|AY035103.1| Arabidopsis thaliana putative ATP-dependent Clp protease ATP-binding subunit ClpX1 (At5g53350) mRNA, complete cds Length = 2096 Score = 93.7 bits (47), Expect = 7e-16 Identities = 119/143 (83%) Strand = Plus / Plus Query: 364 tataatgttcaagctgcccagcaagggatagtgtacatagatgaagtagataaaataaca 423 ||||||||| |||||| ||||||||||| || ||||| |||||||| || || |||||| Sbjct: 988 tataatgttgcagctgcacagcaagggattgtttacattgatgaagtcgacaagataaca 1047 Query: 424 aagaaggcagagagtgcaaacgttagtagagatgtatctggtgaaggtgttcaacaggct 483 ||||||||||| || ||| | || ||||||||||| || |||||||||||||| || Sbjct: 1048 aagaaggcagaaagccttaacatcagcagagatgtatcaggagaaggtgttcaacaagca 1107 Query: 484 ttgttaaaaatcctagaaggaac 506 ||| ||||||| || |||||||| Sbjct: 1108 ttgctaaaaatgctggaaggaac 1130 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 552 tgacagtatacagatagacacaaaagacattcttttcatatgtggtggtgcttttgt 608 ||||| ||| |||||||||||||| ||||| || ||||||||||||||||||||||| Sbjct: 1176 tgacaatatccagatagacacaaaggacatactcttcatatgtggtggtgcttttgt 1232
>ref|XM_466280.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2001 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 558 tatacagatagacacaaaagacattcttttcatatgtggtggtgcttttgttgatttgga 617 |||||||||||| ||||| ||||||||||| || ||||||||||||||| |||| ||||| Sbjct: 1314 tatacagatagatacaaaggacattctttttatttgtggtggtgcttttattgacttgga 1373 Query: 618 gaagactatttctgaaagacgacaagattcatcta 652 ||| ||||| || || || || |||||||| |||| Sbjct: 1374 gaaaactatatcagagaggcggcaagattcttcta 1408 Score = 69.9 bits (35), Expect = 1e-08 Identities = 107/131 (81%) Strand = Plus / Plus Query: 301 caggctggatatgtaggtgaagatgtagagtcgatactgcagaagttactagtggaggcc 360 ||||| || |||||||| ||||||||||| || ||||| | |||||||| | || ||| Sbjct: 1036 caggcagggtatgtaggagaagatgtagaatctatactatacaagttactggcggtggca 1095 Query: 361 gaatataatgttcaagctgcccagcaagggatagtgtacatagatgaagtagataaaata 420 || | ||| || ||||| || || |||||||| |||||||| |||||||| ||||| || Sbjct: 1096 gattttaacgtgcaagcagcacaacaagggatggtgtacatcgatgaagttgataagatc 1155 Query: 421 acaaagaaggc 431 ||||||||||| Sbjct: 1156 acaaagaaggc 1166 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 446 ttagtagagatgtatctggtgaaggtgttcaacaggctttgttaaaaatcctagaagg 503 ||||||||||||| || ||||||||||| || ||||||||||| ||||| || ||||| Sbjct: 1202 ttagtagagatgtctccggtgaaggtgtccagcaggctttgttgaaaatgctggaagg 1259 Score = 56.0 bits (28), Expect = 1e-04 Identities = 100/124 (80%) Strand = Plus / Plus Query: 182 tagataaaagcaatgtacttctgatgggtccaacaggctcaggaaaaacattgcttgcaa 241 |||| ||||||||||| || | ||||| || || |||||||| ||||| | ||||| | Sbjct: 875 tagagaaaagcaatgttctattaatggggcctactggctcaggtaaaactctacttgcta 934 Query: 242 aaacattagcacgcattgtaaatgtaccattcgttatagctgatgcgacatcattaacac 301 | |||||||| ||| |||| ||||| ||||| || || |||||||| ||| |||| |||| Sbjct: 935 agacattagctcgctttgtgaatgtgccatttgtaattgctgatgcaacaacattgacac 994 Query: 302 aggc 305 |||| Sbjct: 995 aggc 998
>gb|AF036328.1|AF036328 Arabidopsis thaliana CLP protease regulatory subunit CLPX mRNA, nuclear gene encoding mitochondrial protein, complete cds Length = 1956 Score = 85.7 bits (43), Expect = 2e-13 Identities = 118/143 (82%) Strand = Plus / Plus Query: 364 tataatgttcaagctgcccagcaagggatagtgtacatagatgaagtagataaaataaca 423 ||||||||| |||||| ||||||||||| || ||||| |||||||| || || |||||| Sbjct: 924 tataatgttgcagctgcacagcaagggattgtttacattgatgaagtcgacaagataaca 983 Query: 424 aagaaggcagagagtgcaaacgttagtagagatgtatctggtgaaggtgttcaacaggct 483 ||||||||||| || || | || ||||||||||| || |||||||||||||| || Sbjct: 984 aagaaggcagaaagcctttacatcagcagagatgtatcaggagaaggtgttcaacaagca 1043 Query: 484 ttgttaaaaatcctagaaggaac 506 ||| ||||||| || |||||||| Sbjct: 1044 ttgctaaaaatgctggaaggaac 1066 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 552 tgacagtatacagatagacacaaaagacattcttttcatatgtggtggtgcttttgt 608 ||||| ||| |||||||||||||| ||||| || ||||||||||||||||||||||| Sbjct: 1112 tgacaatatccagatagacacaaaggacatactcttcatatgtggtggtgcttttgt 1168
>dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020C11 Length = 163328 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Plus Query: 559 atacagatagacacaaaagacattcttttcatatgtggtggtgcttttgttgatttggag 618 ||||||||||| ||||| ||||||||||| || ||||||||||||||| |||| |||||| Sbjct: 44272 atacagatagatacaaaggacattctttttatttgtggtggtgcttttattgacttggag 44331 Query: 619 aagactat 626 || ||||| Sbjct: 44332 aaaactat 44339 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 446 ttagtagagatgtatctggtgaaggtgttcaacaggctttgttaaaaatcctagaagg 503 ||||||||||||| || ||||||||||| || ||||||||||| ||||| || ||||| Sbjct: 43282 ttagtagagatgtctccggtgaaggtgtccagcaggctttgttgaaaatgctggaagg 43339
>dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1712_E04 Length = 110098 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Plus Query: 559 atacagatagacacaaaagacattcttttcatatgtggtggtgcttttgttgatttggag 618 ||||||||||| ||||| ||||||||||| || ||||||||||||||| |||| |||||| Sbjct: 109298 atacagatagatacaaaggacattctttttatttgtggtggtgcttttattgacttggag 109357 Query: 619 aagactat 626 || ||||| Sbjct: 109358 aaaactat 109365 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 446 ttagtagagatgtatctggtgaaggtgttcaacaggctttgttaaaaatcctagaagg 503 ||||||||||||| || ||||||||||| || ||||||||||| ||||| || ||||| Sbjct: 108308 ttagtagagatgtctccggtgaaggtgtccagcaggctttgttgaaaatgctggaagg 108365
>ref|NM_124362.1| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding AT5G49840 mRNA, complete cds Length = 1821 Score = 77.8 bits (39), Expect = 4e-11 Identities = 150/187 (80%) Strand = Plus / Plus Query: 449 gtagagatgtatctggtgaaggtgttcaacaggctttgttaaaaatcctagaaggaactg 508 |||||||||| ||||| ||||||||||||||| | ||| ||||| | || |||||||||| Sbjct: 1046 gtagagatgtctctggagaaggtgttcaacagtcattgctaaaattgctggaaggaactg 1105 Query: 509 ttgtcaccattcctgaaaagggatctcgcaaaaattctcgcaatgacagtatacagatag 568 ||||| | ||||| || || |||| || | | || |||| || || || ||||| | Sbjct: 1106 ttgtcccgattcccgagaaaggattacggagagatcctcgaggagatagcattcagatgg 1165 Query: 569 acacaaaagacattcttttcatatgtggtggtgcttttgttgatttggagaagactattt 628 | ||||||||||| ||||| || ||||||||||| ||| | ||| ||||||| ||| ||| Sbjct: 1166 atacaaaagacatcctttttatttgtggtggtgcatttatcgatctggagaaaactgttt 1225 Query: 629 ctgaaag 635 ||||||| Sbjct: 1226 ctgaaag 1232 Score = 69.9 bits (35), Expect = 1e-08 Identities = 89/107 (83%) Strand = Plus / Plus Query: 220 tcaggaaaaacattgcttgcaaaaacattagcacgcattgtaaatgtaccattcgttata 279 |||||||| || || || |||||||| || || || ||||| ||||| ||||||| ||| Sbjct: 817 tcaggaaagactttactggcaaaaactttggcgcgtattgtcaatgtgccattcgctatt 876 Query: 280 gctgatgcgacatcattaacacaggctggatatgtaggtgaagatgt 326 ||||||||||| ||| |||| ||||| || ||||| ||||||||||| Sbjct: 877 gctgatgcgacttcactaactcaggcaggttatgttggtgaagatgt 923
>dbj|AB013388.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19E1 Length = 73428 Score = 73.8 bits (37), Expect = 6e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 560 tacagatagacacaaaagacattcttttcatatgtggtggtgcttttgt 608 |||||||||||||||| ||||| || ||||||||||||||||||||||| Sbjct: 60444 tacagatagacacaaaggacatactcttcatatgtggtggtgcttttgt 60492 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 364 tataatgttcaagctgcccagcaagggatagtgtacatagatgaagtagataaaataaca 423 ||||||||| |||||| ||||||||||| || ||||| |||||||| || || |||||| Sbjct: 59688 tataatgttgcagctgcacagcaagggattgtttacattgatgaagtcgacaagataaca 59747 Query: 424 aagaagg 430 ||||||| Sbjct: 59748 aagaagg 59754 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 451 agagatgtatctggtgaaggtgttcaacaggctttgttaaaaatcctagaaggaac 506 ||||||||||| || |||||||||||||| || ||| ||||||| || |||||||| Sbjct: 59882 agagatgtatcaggagaaggtgttcaacaagcattgctaaaaatgctggaaggaac 59937
>gb|AY109008.1| Zea mays PCO071547 mRNA sequence Length = 1110 Score = 73.8 bits (37), Expect = 6e-10 Identities = 112/137 (81%) Strand = Plus / Plus Query: 376 gctgcccagcaagggatagtgtacatagatgaagtagataaaataacaaagaaggcagag 435 ||||||||||| || || || || || |||||||| |||||||||||||||||||| || Sbjct: 12 gctgcccagcagggaatcgtctatattgatgaagttgataaaataacaaagaaggctgaa 71 Query: 436 agtgcaaacgttagtagagatgtatctggtgaaggtgttcaacaggctttgttaaaaatc 495 || || |||| |||||||| || ||||||||||| ||||| || ||||| ||||| Sbjct: 72 agcatcaatcttagcagagatgtttcaggtgaaggtgtgcaacaagcattgttgaaaatg 131 Query: 496 ctagaaggaactgttgt 512 || |||||||| ||||| Sbjct: 132 cttgaaggaacggttgt 148 Score = 71.9 bits (36), Expect = 3e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 552 tgacagtatacagatagacacaaaagacattcttttcatatgtggtggtgcttttgttga 611 ||||| ||| ||||| || || ||| ||||||| ||||| || |||||||||||||| || Sbjct: 188 tgacaatatccagattgataccaaaaacattctcttcatctgcggtggtgcttttgtgga 247 Query: 612 tttggagaagactatttctgaaag 635 |||||||| |||||||||||||| Sbjct: 248 cttggagaaaactatttctgaaag 271
>gb|BT004238.1| Arabidopsis thaliana clone RAFL15-12-P18 (R20462) Length = 2195 Score = 69.9 bits (35), Expect = 1e-08 Identities = 89/107 (83%) Strand = Plus / Minus Query: 220 tcaggaaaaacattgcttgcaaaaacattagcacgcattgtaaatgtaccattcgttata 279 |||||||| || || || |||||||| || || || ||||| ||||| ||||||| ||| Sbjct: 331 tcaggaaagactttactggcaaaaactttggcgcgtattgtcaatgtgccattcgctatt 272 Query: 280 gctgatgcgacatcattaacacaggctggatatgtaggtgaagatgt 326 ||||||||||| ||| |||| ||||| || ||||| ||||||||||| Sbjct: 271 gctgatgcgacttcactaactcaggcaggttatgttggtgaagatgt 225 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 449 gtagagatgtatctggtgaaggtgttcaacaggctttgttaaaaatcctagaaggaactg 508 |||||||||| ||||| ||||||||||||||| | ||| ||||| | || |||||||||| Sbjct: 102 gtagagatgtctctggagaaggtgttcaacagtcattgctaaaattgctggaaggaactg 43 Query: 509 ttgtca 514 | |||| Sbjct: 42 tggtca 37
>ref|NM_103063.3| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding AT1G33360 mRNA, complete cds Length = 2441 Score = 63.9 bits (32), Expect = 6e-07 Identities = 251/324 (77%) Strand = Plus / Plus Query: 159 tgatgatcacgataatgtagagatagataaaagcaatgtacttctgatgggtccaacagg 218 ||||||| ||||||||||||| ||||||| |||||||| || ||||||| || || || Sbjct: 1128 tgatgatgacgataatgtagaattagataagagcaatgttctcttgatggggcctactgg 1187 Query: 219 ctcaggaaaaacattgcttgcaaaaacattagcacgcattgtaaatgtaccattcgttat 278 ||| || || ||||| || ||||| || || || | |||||||||| || || || || Sbjct: 1188 ctctgggaagacattactcgcaaagactttggcgaggcttgtaaatgttccttttgtcat 1247 Query: 279 agctgatgcgacatcattaacacaggctggatatgtaggtgaagatgtagagtcgatact 338 |||||||| || || | || |||||||| ||||| ||||| ||||| || || || || Sbjct: 1248 tgctgatgcaactacactgactcaggctggttatgtgggtgacgatgttgaatcaatcct 1307 Query: 339 gcagaagttactagtggaggccgaatataatgttcaagctgcccagcaagggatagtgta 398 || ||| ||||| || || || | || || ||||| || || || || ||||| || Sbjct: 1308 tcataagctactaacggtcgctgagttcaacgtgcaagcagcacaacagggaatagtcta 1367 Query: 399 catagatgaagtagataaaataacaaagaaggcagagagtgcaaacgttagtagagatgt 458 || |||||||| ||||| ||||| |||||||| |||||| |||| |||| | ||||| Sbjct: 1368 tattgatgaagttgataagataactaagaaggctgagagtttaaacattagccgggatgt 1427 Query: 459 atctggtgaaggtgttcaacaggc 482 ||||| ||||||||||||||||| Sbjct: 1428 ttctggggaaggtgttcaacaggc 1451 Score = 50.1 bits (25), Expect = 0.009 Identities = 76/93 (81%) Strand = Plus / Plus Query: 558 tatacagatagacacaaaagacattcttttcatatgtggtggtgcttttgttgatttgga 617 ||||||||||||||||||||| || || || || ||||| || || |||||||| | || Sbjct: 1527 tatacagatagacacaaaagatatcctatttatctgtggaggagcatttgttgaccttga 1586 Query: 618 gaagactatttctgaaagacgacaagattcatc 650 |||||| ||| || ||||||||||| ||||| Sbjct: 1587 gaagaccattgtggatagacgacaagactcatc 1619
>gb|BT015893.1| Arabidopsis thaliana At1g33360 gene, complete cds Length = 1971 Score = 63.9 bits (32), Expect = 6e-07 Identities = 251/324 (77%) Strand = Plus / Plus Query: 159 tgatgatcacgataatgtagagatagataaaagcaatgtacttctgatgggtccaacagg 218 ||||||| ||||||||||||| ||||||| |||||||| || ||||||| || || || Sbjct: 894 tgatgatgacgataatgtagaattagataagagcaatgttctcttgatggggcctactgg 953 Query: 219 ctcaggaaaaacattgcttgcaaaaacattagcacgcattgtaaatgtaccattcgttat 278 ||| || || ||||| || ||||| || || || | |||||||||| || || || || Sbjct: 954 ctctgggaagacattactcgcaaagactttggcgaggcttgtaaatgttccttttgtcat 1013 Query: 279 agctgatgcgacatcattaacacaggctggatatgtaggtgaagatgtagagtcgatact 338 |||||||| || || | || |||||||| ||||| ||||| ||||| || || || || Sbjct: 1014 tgctgatgcaactacactgactcaggctggttatgtgggtgacgatgttgaatcaatcct 1073 Query: 339 gcagaagttactagtggaggccgaatataatgttcaagctgcccagcaagggatagtgta 398 || ||| ||||| || || || | || || ||||| || || || || ||||| || Sbjct: 1074 tcataagctactaacggtcgctgagttcaacgtgcaagcagcacaacagggaatagtcta 1133 Query: 399 catagatgaagtagataaaataacaaagaaggcagagagtgcaaacgttagtagagatgt 458 || |||||||| ||||| ||||| |||||||| |||||| |||| |||| | ||||| Sbjct: 1134 tattgatgaagttgataagataactaagaaggctgagagtttaaacattagccgggatgt 1193 Query: 459 atctggtgaaggtgttcaacaggc 482 ||||| ||||||||||||||||| Sbjct: 1194 ttctggggaaggtgttcaacaggc 1217 Score = 50.1 bits (25), Expect = 0.009 Identities = 76/93 (81%) Strand = Plus / Plus Query: 558 tatacagatagacacaaaagacattcttttcatatgtggtggtgcttttgttgatttgga 617 ||||||||||||||||||||| || || || || ||||| || || |||||||| | || Sbjct: 1293 tatacagatagacacaaaagatatcctatttatctgtggaggagcatttgttgaccttga 1352 Query: 618 gaagactatttctgaaagacgacaagattcatc 650 |||||| ||| || ||||||||||| ||||| Sbjct: 1353 gaagaccattgtggatagacgacaagactcatc 1385
>gb|BT015363.1| Arabidopsis thaliana At1g33360 gene, complete cds Length = 2348 Score = 63.9 bits (32), Expect = 6e-07 Identities = 251/324 (77%) Strand = Plus / Plus Query: 159 tgatgatcacgataatgtagagatagataaaagcaatgtacttctgatgggtccaacagg 218 ||||||| ||||||||||||| ||||||| |||||||| || ||||||| || || || Sbjct: 1080 tgatgatgacgataatgtagaattagataagagcaatgttctcttgatggggcctactgg 1139 Query: 219 ctcaggaaaaacattgcttgcaaaaacattagcacgcattgtaaatgtaccattcgttat 278 ||| || || ||||| || ||||| || || || | |||||||||| || || || || Sbjct: 1140 ctctgggaagacattactcgcaaagactttggcgaggcttgtaaatgttccttttgtcat 1199 Query: 279 agctgatgcgacatcattaacacaggctggatatgtaggtgaagatgtagagtcgatact 338 |||||||| || || | || |||||||| ||||| ||||| ||||| || || || || Sbjct: 1200 tgctgatgcaactacactgactcaggctggttatgtgggtgacgatgttgaatcaatcct 1259 Query: 339 gcagaagttactagtggaggccgaatataatgttcaagctgcccagcaagggatagtgta 398 || ||| ||||| || || || | || || ||||| || || || || ||||| || Sbjct: 1260 tcataagctactaacggtcgctgagttcaacgtgcaagcagcacaacagggaatagtcta 1319 Query: 399 catagatgaagtagataaaataacaaagaaggcagagagtgcaaacgttagtagagatgt 458 || |||||||| ||||| ||||| |||||||| |||||| |||| |||| | ||||| Sbjct: 1320 tattgatgaagttgataagataactaagaaggctgagagtttaaacattagccgggatgt 1379 Query: 459 atctggtgaaggtgttcaacaggc 482 ||||| ||||||||||||||||| Sbjct: 1380 ttctggggaaggtgttcaacaggc 1403 Score = 50.1 bits (25), Expect = 0.009 Identities = 76/93 (81%) Strand = Plus / Plus Query: 558 tatacagatagacacaaaagacattcttttcatatgtggtggtgcttttgttgatttgga 617 ||||||||||||||||||||| || || || || ||||| || || |||||||| | || Sbjct: 1479 tatacagatagacacaaaagatatcctatttatctgtggaggagcatttgttgaccttga 1538 Query: 618 gaagactatttctgaaagacgacaagattcatc 650 |||||| ||| || ||||||||||| ||||| Sbjct: 1539 gaagaccattgtggatagacgacaagactcatc 1571
>emb|BX572094.1| Prochlorococcus marinus MED4 complete genome; segment 5/5 Length = 262202 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 451 agagatgtatctggtgaaggtgttcaacaggctttgttaaaaatcctagaaggaac 506 |||||||||||||| ||||| |||||||| || ||||||||||| || |||||||| Sbjct: 193233 agagatgtatctggagaaggagttcaacaagcattgttaaaaatgcttgaaggaac 193288
>emb|BX814503.1|CNS0AALX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB77ZE11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2389 Score = 63.9 bits (32), Expect = 6e-07 Identities = 251/324 (77%) Strand = Plus / Plus Query: 159 tgatgatcacgataatgtagagatagataaaagcaatgtacttctgatgggtccaacagg 218 ||||||| ||||||||||||| ||||||| |||||||| || ||||||| || || || Sbjct: 1105 tgatgatgacgataatgtagaattagataagagcaatgttctcttgatggggcctactgg 1164 Query: 219 ctcaggaaaaacattgcttgcaaaaacattagcacgcattgtaaatgtaccattcgttat 278 ||| || || ||||| || ||||| || || || | |||||||||| || || || || Sbjct: 1165 ctctgggaagacattactcgcaaagactttggcgaggcttgtaaatgttccttttgtcat 1224 Query: 279 agctgatgcgacatcattaacacaggctggatatgtaggtgaagatgtagagtcgatact 338 |||||||| || || | || |||||||| ||||| ||||| ||||| || || || || Sbjct: 1225 tgctgatgcaactacactgactcaggctggttatgtgggtgacgatgttgaatcaatcct 1284 Query: 339 gcagaagttactagtggaggccgaatataatgttcaagctgcccagcaagggatagtgta 398 || ||| ||||| || || || | || || ||||| || || || || ||||| || Sbjct: 1285 tcataagctactaacggtcgctgagttcaacgtgcaagcagcacaacagggaatagtcta 1344 Query: 399 catagatgaagtagataaaataacaaagaaggcagagagtgcaaacgttagtagagatgt 458 || |||||||| ||||| ||||| |||||||| |||||| |||| |||| | ||||| Sbjct: 1345 tattgatgaagttgataagataactaagaaggctgagagtttaaacattagccgggatgt 1404 Query: 459 atctggtgaaggtgttcaacaggc 482 ||||| ||||||||||||||||| Sbjct: 1405 ttctggggaaggtgttcaacaggc 1428 Score = 50.1 bits (25), Expect = 0.009 Identities = 76/93 (81%) Strand = Plus / Plus Query: 558 tatacagatagacacaaaagacattcttttcatatgtggtggtgcttttgttgatttgga 617 ||||||||||||||||||||| || || || || ||||| || || |||||||| | || Sbjct: 1504 tatacagatagacacaaaagatatcctatttatctgtggaggagcatttgttgaccttga 1563 Query: 618 gaagactatttctgaaagacgacaagattcatc 650 |||||| ||| || ||||||||||| ||||| Sbjct: 1564 gaagaccattgtggatagacgacaagactcatc 1596
>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome Length = 3031430 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 260 taaatgtaccattcgttatagctgatgcgacatcattaacacaggctggatatgtaggtg 319 ||||||| ||||| | |||||| ||||| ||| |||||||| |||| |||||||| |||| Sbjct: 1643878 taaatgttccatttgctatagcagatgctacaacattaacagaggcaggatatgttggtg 1643819 Query: 320 aagatgt 326 ||||||| Sbjct: 1643818 aagatgt 1643812 Score = 40.1 bits (20), Expect = 8.9 Identities = 38/44 (86%) Strand = Plus / Minus Query: 451 agagatgtatctggtgaaggtgttcaacaggctttgttaaaaat 494 |||||||| ||||| || ||||||||||| || || |||||||| Sbjct: 1643687 agagatgtttctggagagggtgttcaacaagccttattaaaaat 1643644 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 acaggctcaggaaaaacatt 233 |||||||||||||||||||| Sbjct: 384495 acaggctcaggaaaaacatt 384514
>gb|AC122730.27| Medicago truncatula clone mth2-36p5, complete sequence Length = 127163 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 452 gagatgtatctggtgaaggtgttcaacaggctttgttaaaaatcctagaaggaactgt 509 ||||||| |||||||| |||||||| ||||| || |||||||| || ||||||||||| Sbjct: 5394 gagatgtttctggtgagggtgttcagcaggcattattaaaaatgctcgaaggaactgt 5337 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 562 cagatagacacaaaagacattcttttcatatgtggtggtgcttttgttgat 612 |||||||||||||| |||||||||| ||||||||||| || ||| ||||| Sbjct: 4445 cagatagacacaaagaacattctttttatatgtggtggagcatttattgat 4395 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 229 acattgcttgcaaaaacattagcacgcattgtaaatgtaccattcgttatagctgatgcg 288 ||||| |||||||||||| |||| || |||| ||||| ||||| || || |||||||| Sbjct: 6353 acattacttgcaaaaacactagctcgatttgtgaatgttccatttgtcattgctgatgca 6294 Query: 289 acatcattaacacaggc 305 ||| | ||||||||||| Sbjct: 6293 acaactttaacacaggc 6277
>dbj|AK221858.1| Arabidopsis thaliana mRNA for CLP protease regulatory subunit CLPX-like, complete cds, clone: RAFL22-10-E04 Length = 965 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 562 cagatagacacaaaagacattcttttcatatgtggtggtgcttttgttgatttggagaag 621 ||||| || ||||||||||| ||||| || ||||||||||| ||| | ||| ||||||| Sbjct: 32 cagatggatacaaaagacatcctttttatttgtggtggtgcatttatcgatctggagaaa 91 Query: 622 actatttctgaaag 635 ||| |||||||||| Sbjct: 92 actgtttctgaaag 105
>dbj|AB025612.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K21G20 Length = 35238 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 562 cagatagacacaaaagacattcttttcatatgtggtggtgcttttgttgatttggagaag 621 ||||| || ||||||||||| ||||| || ||||||||||| ||| | ||| ||||||| Sbjct: 22798 cagatggatacaaaagacatcctttttatttgtggtggtgcatttatcgatctggagaaa 22857 Query: 622 actatttctgaaag 635 ||| |||||||||| Sbjct: 22858 actgtttctgaaag 22871 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 449 gtagagatgtatctggtgaaggtgttcaacaggctttgttaaaaatcctagaaggaactg 508 |||||||||| ||||| ||||||||||||||| | ||| ||||| | || |||||||||| Sbjct: 22337 gtagagatgtctctggagaaggtgttcaacagtcattgctaaaattgctggaaggaactg 22396 Query: 509 t 509 | Sbjct: 22397 t 22397 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Plus Query: 221 caggaaaaacattgcttgcaaaaacattagcacgcattgtaaatgtaccattcgttatag 280 ||||||| || || || |||||||| || || || ||||| ||||| ||||||| ||| | Sbjct: 21526 caggaaagactttactggcaaaaactttggcgcgtattgtcaatgtgccattcgctattg 21585 Query: 281 ctgatgcgacatcattaacacaggc 305 |||||||||| ||| |||| ||||| Sbjct: 21586 ctgatgcgacttcactaactcaggc 21610
>gb|AE017160.1| Chlamydophila pneumoniae TW-183, section 4 of 4 of the complete genome Length = 324746 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 450 tagagatgtatctggtgaaggtgttcaacaggctttgttaaaaatcctagaaggaac 506 ||||||||| ||||| ||||| |||||||| || |||||||||||| | |||||||| Sbjct: 54903 tagagatgtttctggcgaaggggttcaacaagcattgttaaaaatcgttgaaggaac 54847
>gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome Length = 1229853 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 450 tagagatgtatctggtgaaggtgttcaacaggctttgttaaaaatcctagaaggaac 506 ||||||||| ||||| ||||| |||||||| || |||||||||||| | |||||||| Sbjct: 1112673 tagagatgtttctggcgaaggggttcaacaagcattgttaaaaatcgttgaaggaac 1112729
>gb|AE000783.1| Borrelia burgdorferi B31, complete genome Length = 910724 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 451 agagatgtatctggtgaaggtgttcaacaggctttgttaaa 491 |||||||| ||||| ||||| |||||||||||||||||||| Sbjct: 639171 agagatgtttctggggaaggggttcaacaggctttgttaaa 639211
>gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome Length = 1230230 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 450 tagagatgtatctggtgaaggtgttcaacaggctttgttaaaaatcctagaaggaac 506 ||||||||| ||||| ||||| |||||||| || |||||||||||| | |||||||| Sbjct: 958769 tagagatgtttctggcgaaggggttcaacaagcattgttaaaaatcgttgaaggaac 958713
>dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, complete sequence Length = 1226565 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 450 tagagatgtatctggtgaaggtgttcaacaggctttgttaaaaatcctagaaggaac 506 ||||||||| ||||| ||||| |||||||| || |||||||||||| | |||||||| Sbjct: 958090 tagagatgtttctggcgaaggggttcaacaagcattgttaaaaatcgttgaaggaac 958034
>gb|DQ097395.1| Bacillus thuringiensis serovar kurstaki strain 8010 ATP-dependent clp protease ATP-binding subunit (clpX) and ATP-dependent protease (la) mRNAs, complete cds Length = 3418 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 226 aaaacattgcttgcaaaaacattagcacgcattgtaaatgtaccattcgttatagctgat 285 |||||||| |||||| |||| ||||| || ||| ||||||| ||||| | || || || Sbjct: 618 aaaacattacttgcacaaacgttagcgcgtattctaaatgttccatttgcaatcgcggac 677 Query: 286 gcgacatcattaacacaggctggatatgtaggtgaagatgtaga 329 || ||||| |||||| | ||||||||||| || ||||||||||| Sbjct: 678 gcaacatctttaacagaagctggatatgttggagaagatgtaga 721 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 gatgtatctggtgaaggtgt 473 |||||||||||||||||||| Sbjct: 846 gatgtatctggtgaaggtgt 865
>gb|AC137828.24| Medicago truncatula clone mth2-6c16, complete sequence Length = 128575 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 448 agtagagatgtatctggtgaaggtgttcaacaggc 482 ||||||||||| ||||||||||||||||| ||||| Sbjct: 24144 agtagagatgtctctggtgaaggtgttcagcaggc 24178
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 55 aaaaaggttctatcagtagccgtatacaaccactacaag 93 |||||||||||| ||||||| || ||||||||||||||| Sbjct: 4605390 aaaaaggttctagcagtagcggtgtacaaccactacaag 4605352 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ctcgacgagttcgtcatcgg 41 |||||||||||||||||||| Sbjct: 4553426 ctcgacgagttcgtcatcgg 4553445
>gb|AE017321.1| Wolbachia endosymbiont strain TRS of Brugia malayi, complete genome Length = 1080084 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 263 atgtaccattcgttatagctgatgcgacatcattaacacaggctggatatgtaggtgaag 322 |||||||||||| ||| |||||||||||| | || || |||| || ||||||||||| | Sbjct: 728134 atgtaccattcgctatggctgatgcgacaactttgaccgaggcaggttatgtaggtgatg 728075 Query: 323 atgtaga 329 ||||||| Sbjct: 728074 atgtaga 728068
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 466 gaaggtgttcaacaggctttgttaaaaatcctagaagg 503 |||||||| ||||| |||||||||||||| |||||||| Sbjct: 4494150 gaaggtgtacaacaagctttgttaaaaatgctagaagg 4494113
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 454 gatgtatctggtgaaggtgttcaacaggctttgttaaa 491 ||||| || ||||||||||||||||| ||||||||||| Sbjct: 3949901 gatgtttcaggtgaaggtgttcaacaagctttgttaaa 3949864
>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome Length = 2685015 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 454 gatgtatctggtgaaggtgttcaaca 479 |||||||||||||||||||||||||| Sbjct: 1287401 gatgtatctggtgaaggtgttcaaca 1287426
>emb|AM180252.1| Lawsonia intracellularis PHE/MN1-00 Length = 1457619 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 277 atagctgatgcgacatcattaacacaggctggatatgt 314 ||||||||||| ||| |||||||| ||||||||||||| Sbjct: 990059 atagctgatgcaacaacattaacagaggctggatatgt 990096
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 50.1 bits (25), Expect = 0.009 Identities = 49/57 (85%) Strand = Plus / Plus Query: 450 tagagatgtatctggtgaaggtgttcaacaggctttgttaaaaatcctagaaggaac 506 ||||||||| ||||||||||| || ||||| || || |||||||| || |||||||| Sbjct: 1640314 tagagatgtctctggtgaaggagtacaacaagcattattaaaaatgcttgaaggaac 1640370 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Plus Query: 65 tatcagtagccgtatacaaccactacaa 92 |||||||||||||||| ||||||||||| Sbjct: 1639950 tatcagtagccgtatataaccactacaa 1639977
>gb|CP000013.1| Borrelia garinii PBi, complete genome Length = 904246 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 451 agagatgtatctggtgaaggtgttcaacaggctttgttaaa 491 |||||||| ||||| ||||| ||||| |||||||||||||| Sbjct: 641099 agagatgtttctggagaaggggttcagcaggctttgttaaa 641139 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 295 ttaacacaggctggatatgtaggtgaagatgtaga 329 |||||| | ||||||||||| |||||||||||||| Sbjct: 640943 ttaacagaagctggatatgttggtgaagatgtaga 640977
>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome Length = 2427734 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 202 ctgatgggtccaacaggctcaggaaaaacatt 233 ||||| ||||||||||||||||| |||||||| Sbjct: 1284535 ctgattggtccaacaggctcagggaaaacatt 1284566 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 452 gagatgtatctggtgaaggtgttcaacaggctttgttaaaa 492 ||||||| ||||||||||| ||||| ||||| || |||||| Sbjct: 1284785 gagatgtttctggtgaaggggttcagcaggcattattaaaa 1284825
>ref|XM_581880.2| PREDICTED: Bos taurus similar to cartilage intermediate layer protein, nucleotide pyrophosphohydrolase (LOC505573), mRNA Length = 5526 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Plus Query: 301 caggctggatatgtaggtgaagat 324 |||||||||||||||||||||||| Sbjct: 4351 caggctggatatgtaggtgaagat 4374
>ref|NM_011802.1| Mus musculus caseinolytic peptidase X (E.coli) (Clpx), mRNA Length = 2847 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Plus Query: 301 caggctggatatgtaggtgaagat 324 |||||||||||||||||||||||| Sbjct: 1151 caggctggatatgtaggtgaagat 1174
>gb|BC061153.1| Mus musculus caseinolytic peptidase X (E.coli), mRNA (cDNA clone MGC:74287 IMAGE:6593118), complete cds Length = 2432 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Plus Query: 301 caggctggatatgtaggtgaagat 324 |||||||||||||||||||||||| Sbjct: 1116 caggctggatatgtaggtgaagat 1139
>gb|AC114645.9| Mus musculus chromosome 9, clone RP24-131G14, complete sequence Length = 214734 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 301 caggctggatatgtaggtgaagat 324 |||||||||||||||||||||||| Sbjct: 210228 caggctggatatgtaggtgaagat 210205
>gb|AC110235.13| Mus musculus chromosome 9, clone RP23-100M12, complete sequence Length = 220755 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Plus Query: 301 caggctggatatgtaggtgaagat 324 |||||||||||||||||||||||| Sbjct: 200882 caggctggatatgtaggtgaagat 200905
>ref|XM_860781.1| PREDICTED: Canis familiaris similar to ATP-dependent Clp protease ATP-binding subunit ClpX-like, mitochondrial precursor, transcript variant 3 (LOC609344), mRNA Length = 2306 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Plus Query: 301 caggctggatatgtaggtgaagat 324 |||||||||||||||||||||||| Sbjct: 928 caggctggatatgtaggtgaagat 951
>ref|XM_847415.1| PREDICTED: Canis familiaris similar to ATP-dependent Clp protease ATP-binding subunit ClpX-like, mitochondrial precursor, transcript variant 1 (LOC609344), mRNA Length = 2414 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Plus Query: 301 caggctggatatgtaggtgaagat 324 |||||||||||||||||||||||| Sbjct: 1036 caggctggatatgtaggtgaagat 1059
>gb|BC085867.1| Rattus norvegicus caseinolytic peptidase X (E.coli), mRNA (cDNA clone MGC:94617 IMAGE:7190926), complete cds Length = 2419 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Plus Query: 301 caggctggatatgtaggtgaagat 324 |||||||||||||||||||||||| Sbjct: 1096 caggctggatatgtaggtgaagat 1119
>ref|NM_001007803.1| Rattus norvegicus caseinolytic peptidase X (E.coli) (Clpx), mRNA Length = 1902 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Plus Query: 301 caggctggatatgtaggtgaagat 324 |||||||||||||||||||||||| Sbjct: 970 caggctggatatgtaggtgaagat 993
>emb|CR848038.1| Chlamydophila abortus strain S26/3, complete genome Length = 1144377 Score = 48.1 bits (24), Expect = 0.037 Identities = 45/52 (86%) Strand = Plus / Plus Query: 452 gagatgtatctggtgaaggtgttcaacaggctttgttaaaaatcctagaagg 503 ||||||| ||||| |||||||||||||| ||| | |||||||| ||||||| Sbjct: 1038567 gagatgtttctggcgaaggtgttcaacaagctctattaaaaattatagaagg 1038618 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 578 acattcttttcatatgtggtggtgcttt 605 |||||||||||||| |||||||||||| Sbjct: 1038693 acattcttttcatagttggtggtgcttt 1038720
>emb|AJ276991.1|MMU276991 Mus musculus partial mRNA for ClpX protein Length = 2235 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Plus Query: 301 caggctggatatgtaggtgaagat 324 |||||||||||||||||||||||| Sbjct: 1082 caggctggatatgtaggtgaagat 1105
>gb|CP000236.1| Ehrlichia chaffeensis str. Arkansas, complete genome Length = 1176248 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 454 gatgtatctggtgaaggtgttcaacaggcttt 485 ||||||||||| |||||||||||||| ||||| Sbjct: 928248 gatgtatctggcgaaggtgttcaacaagcttt 928217
>dbj|AK163034.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430088F02 product:caseinolytic protease X (E.coli), full insert sequence Length = 4692 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Plus Query: 301 caggctggatatgtaggtgaagat 324 |||||||||||||||||||||||| Sbjct: 2558 caggctggatatgtaggtgaagat 2581
>dbj|AK087848.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330029I21 product:caseinolytic protease X (E.coli), full insert sequence Length = 2840 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Plus Query: 301 caggctggatatgtaggtgaagat 324 |||||||||||||||||||||||| Sbjct: 1154 caggctggatatgtaggtgaagat 1177
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 48.1 bits (24), Expect = 0.037 Identities = 63/76 (82%) Strand = Plus / Minus Query: 133 aattctgggtgtccagacgctgcaaatgatgatcacgataatgtagagatagataaaagc 192 ||||||||||| | ||| ||||||||||||||| | |||| |||| ||| |||||| | Sbjct: 21454704 aattctgggtgcctagatgctgcaaatgatgatgaaaataacatagaaataaataaaatc 21454645 Query: 193 aatgtacttctgatgg 208 |||||| |||| |||| Sbjct: 21454644 aatgtatttctaatgg 21454629
>gb|AF230642.1|AF230642 Ehrlichia chaffeensis ClpX (clpX) gene, complete cds; 28-kDa outer membrance protein gene cluster, partial sequence and unknown genes Length = 14759 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 454 gatgtatctggtgaaggtgttcaacaggcttt 485 ||||||||||| |||||||||||||| ||||| Sbjct: 982 gatgtatctggcgaaggtgttcaacaagcttt 1013
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Plus Query: 460 tctggtgaaggtgttcaacaggctttgttaaaaatcctagaagg 503 |||||||||||||| || || |||||||||||||| || ||||| Sbjct: 4444655 tctggtgaaggtgtacagcaagctttgttaaaaatgctggaagg 4444698 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 65 tatcagtagccgtatacaaccactacaa 92 |||| |||||||| |||||||||||||| Sbjct: 4444290 tatctgtagccgtttacaaccactacaa 4444317
>dbj|AP005156.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1729_E01 Length = 155527 Score = 48.1 bits (24), Expect = 0.037 Identities = 63/76 (82%) Strand = Plus / Minus Query: 133 aattctgggtgtccagacgctgcaaatgatgatcacgataatgtagagatagataaaagc 192 ||||||||||| | ||| ||||||||||||||| | |||| |||| ||| |||||| | Sbjct: 98760 aattctgggtgcctagatgctgcaaatgatgatgaaaataacatagaaataaataaaatc 98701 Query: 193 aatgtacttctgatgg 208 |||||| |||| |||| Sbjct: 98700 aatgtatttctaatgg 98685
>gb|AF134983.1|AF134983 Mus musculus energy-dependent regulator of proteolysis (ClpX) mRNA, complete cds Length = 2847 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Plus Query: 301 caggctggatatgtaggtgaagat 324 |||||||||||||||||||||||| Sbjct: 1151 caggctggatatgtaggtgaagat 1174
>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome Length = 2201561 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 454 gatgtatctggtgaaggtgttcaacaggctttgttaaaaatcctaga 500 ||||||||||| || ||||||||||| ||| | ||||||||| |||| Sbjct: 1535543 gatgtatctggggagggtgttcaacaagctcttttaaaaatcataga 1535589
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Minus Query: 55 aaaaaggttctatcagtagccgtatacaaccactacaag 93 ||||||||||| ||||||| || ||||||||||||||| Sbjct: 4207870 aaaaaggttctcgcagtagcggtgtacaaccactacaag 4207832
>gb|AC027035.5|AC027035 Arabidopsis thaliana chromosome 1 BAC T16O9 genomic sequence, complete sequence Length = 81609 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 159 tgatgatcacgataatgtagagatagataaaagcaatgt 197 ||||||| ||||||||||||| ||||||| |||||||| Sbjct: 69759 tgatgatgacgataatgtagaattagataagagcaatgt 69797 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 454 gatgtatctggtgaaggtgttcaacaggc 482 ||||| ||||| ||||||||||||||||| Sbjct: 70501 gatgtttctggggaaggtgttcaacaggc 70529 Score = 40.1 bits (20), Expect = 8.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 560 tacagatagacacaaaagacattcttttcatatgtggtggtgcttttgttga 611 ||||||||||||||||||| || || || || ||||| || || |||||||| Sbjct: 71005 tacagatagacacaaaagatatcctatttatctgtggaggagcatttgttga 71056
>gb|AC051630.4|AC051630 Arabidopsis thaliana chromosome 1 BAC F10C21 genomic sequence, complete sequence Length = 97242 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 159 tgatgatcacgataatgtagagatagataaaagcaatgt 197 ||||||| ||||||||||||| ||||||| |||||||| Sbjct: 16972 tgatgatgacgataatgtagaattagataagagcaatgt 17010 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 454 gatgtatctggtgaaggtgttcaacaggc 482 ||||| ||||| ||||||||||||||||| Sbjct: 17714 gatgtttctggggaaggtgttcaacaggc 17742 Score = 40.1 bits (20), Expect = 8.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 560 tacagatagacacaaaagacattcttttcatatgtggtggtgcttttgttga 611 ||||||||||||||||||| || || || || ||||| || || |||||||| Sbjct: 18218 tacagatagacacaaaagatatcctatttatctgtggaggagcatttgttga 18269
>emb|BX293987.7| Mouse DNA sequence from clone RP24-426C3 on chromosome 2, complete sequence Length = 57734 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 413 ataaaataacaaagaaggcagagagtg 439 |||||||||||||||||| |||||||| Sbjct: 37963 ataaaataacaaagaaggtagagagtg 37937
>gb|AE017226.1| Treponema denticola ATCC 35405, complete genome Length = 2843201 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 452 gagatgtatctggtgaaggtgttcaacaggctttgttaaaaatcctagaaggaac 506 |||||||||| || |||||||||||||| ||| | ||||||| |||||||||| Sbjct: 1727607 gagatgtatcgggcgaaggtgttcaacaagctcttctaaaaataatagaaggaac 1727661
>gb|AC132573.2| Mus musculus BAC clone RP24-410H24 from chromosome 15, complete sequence Length = 194219 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 612 tttggagaagactatttctgaa 633 |||||||||||||||||||||| Sbjct: 42541 tttggagaagactatttctgaa 42562
>gb|AC125541.4| Mus musculus BAC clone RP23-237I10 from chromosome 15, complete sequence Length = 215447 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 612 tttggagaagactatttctgaa 633 |||||||||||||||||||||| Sbjct: 162111 tttggagaagactatttctgaa 162132
>emb|Z73906.1|CED2030 Caenorhabditis elegans Cosmid D2030, complete sequence Length = 42665 Score = 44.1 bits (22), Expect = 0.57 Identities = 34/38 (89%) Strand = Plus / Plus Query: 289 acatcattaacacaggctggatatgtaggtgaagatgt 326 |||||| | ||||| ||||||||||| ||||||||||| Sbjct: 12260 acatcaatgacacaagctggatatgttggtgaagatgt 12297 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 452 gagatgtatctggtgaaggtgttcaaca 479 ||||||||||||| |||||||| ||||| Sbjct: 12426 gagatgtatctggagaaggtgtccaaca 12453
>ref|XM_721939.1| Plasmodium yoelii yoelii str. 17XNL cell division protein (PY00809) partial mRNA Length = 3333 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Plus Query: 223 ggaaaaacattgcttgcaaaaacattagca 252 ||||||||||||||||| |||||| ||||| Sbjct: 1780 ggaaaaacattgcttgctaaaacaatagca 1809
>emb|CR378671.1| Photobacterium profundum SS9; segment 9/12 Length = 349688 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 457 gtatctggtgaaggtgttcaacaggc 482 |||||||||||||||||||| ||||| Sbjct: 267751 gtatctggtgaaggtgttcagcaggc 267726
>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA, complete genome Length = 2516575 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 454 gatgtatctggtgaaggtgttcaaca 479 |||||||||||||||||||| ||||| Sbjct: 1138444 gatgtatctggtgaaggtgtccaaca 1138469
>ref|NM_001025906.2| Caenorhabditis elegans D2030.2b (D2030.2) mRNA, complete cds Length = 1800 Score = 44.1 bits (22), Expect = 0.57 Identities = 34/38 (89%) Strand = Plus / Plus Query: 289 acatcattaacacaggctggatatgtaggtgaagatgt 326 |||||| | ||||| ||||||||||| ||||||||||| Sbjct: 910 acatcaatgacacaagctggatatgttggtgaagatgt 947 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 452 gagatgtatctggtgaaggtgttcaaca 479 ||||||||||||| |||||||| ||||| Sbjct: 1076 gagatgtatctggagaaggtgtccaaca 1103
>ref|NM_001025905.2| Caenorhabditis elegans D2030.2a (D2030.2) mRNA, complete cds Length = 2070 Score = 44.1 bits (22), Expect = 0.57 Identities = 34/38 (89%) Strand = Plus / Plus Query: 289 acatcattaacacaggctggatatgtaggtgaagatgt 326 |||||| | ||||| ||||||||||| ||||||||||| Sbjct: 955 acatcaatgacacaagctggatatgttggtgaagatgt 992 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 452 gagatgtatctggtgaaggtgttcaaca 479 ||||||||||||| |||||||| ||||| Sbjct: 1121 gagatgtatctggagaaggtgtccaaca 1148
>gb|AY190934.1| Drosophila erecta clone DERF01_13_G01 (D1408) genomic sequence Length = 38418 Score = 44.1 bits (22), Expect = 0.57 Identities = 37/42 (88%) Strand = Plus / Minus Query: 52 gctaaaaaggttctatcagtagccgtatacaaccactacaag 93 |||||||||||||| | || ||||| ||||||||||||||| Sbjct: 22964 gctaaaaaggttctggcggtggccgtctacaaccactacaag 22923
>gb|AE014133.1| Streptococcus mutans UA159, complete genome Length = 2030921 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 454 gatgtatctggtgaaggtgttcaaca 479 |||||||||||||||||||| ||||| Sbjct: 898656 gatgtatctggtgaaggtgtccaaca 898681
>gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome Length = 1993564 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 304 gctggatatgtaggtgaagatgtaga 329 ||||||||||| |||||||||||||| Sbjct: 830673 gctggatatgttggtgaagatgtaga 830698
>gb|AE015927.1| Clostridium tetani E88, complete genome Length = 2799251 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 304 gctggatatgtaggtgaagatgtaga 329 |||||||||||||| ||||||||||| Sbjct: 2513211 gctggatatgtaggcgaagatgtaga 2513186
>gb|AC005242.1|AC005242 Homo sapiens chromosome 17, clone hRPK.118_F_13, complete sequence Length = 160262 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 567 agacacaaaagacattcttttc 588 |||||||||||||||||||||| Sbjct: 111238 agacacaaaagacattcttttc 111217
>dbj|BA000021.3| Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis DNA, complete genome Length = 697724 Score = 44.1 bits (22), Expect = 0.57 Identities = 37/42 (88%) Strand = Plus / Minus Query: 451 agagatgtatctggtgaaggtgttcaacaggctttgttaaaa 492 |||||||| || ||||||||||| ||||| ||||| |||||| Sbjct: 183542 agagatgtttcgggtgaaggtgtacaacaagctttattaaaa 183501
>gb|AY446351.1| Cicer arietinum microsatellite C9 25902 sequence Length = 528 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 469 ggtgttcaacaggctttgttaaaaatcctagaaggaactgt 509 |||||||| ||||| || |||||||| || ||||||||||| Sbjct: 291 ggtgttcagcaggcgttattaaaaatgctggaaggaactgt 251
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 454 gatgtatctggtgaaggtgttcaacaggc 482 |||||||||||||||||||| || ||||| Sbjct: 4271368 gatgtatctggtgaaggtgtgcagcaggc 4271340
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 454 gatgtatctggtgaaggtgttcaacaggc 482 |||||||||||||||||||| || ||||| Sbjct: 4281912 gatgtatctggtgaaggtgtgcagcaggc 4281884
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 454 gatgtatctggtgaaggtgttcaacaggc 482 |||||||||||||||||||| || ||||| Sbjct: 4282284 gatgtatctggtgaaggtgtgcagcaggc 4282256
>gb|DQ398104.1| Helicosporidium sp. ex Simulium jonesii plastid, complete genome Length = 37454 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 406 gaagtagataaaataacaaag 426 ||||||||||||||||||||| Sbjct: 30619 gaagtagataaaataacaaag 30639
>gb|AY458647.1| Uncultured bacterium 580 clone EBAC000-36A07 genomic sequence Length = 83177 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 407 aagtagataaaataacaaaga 427 ||||||||||||||||||||| Sbjct: 15618 aagtagataaaataacaaaga 15598
>gb|AC121809.3| Mus musculus BAC clone RP23-451B23 from chromosome 8, complete sequence Length = 192626 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 217 ggctcaggaaaaacattgctt 237 ||||||||||||||||||||| Sbjct: 35815 ggctcaggaaaaacattgctt 35835
>gb|AC125352.4| Mus musculus BAC clone RP23-451M13 from chromosome 8, complete sequence Length = 203416 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 560 tacagatagacacaaaagaca 580 ||||||||||||||||||||| Sbjct: 171023 tacagatagacacaaaagaca 171043
>ref|XM_774179.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_587_43369_42056) partial mRNA Length = 1314 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 ccaacaggctcaggaaaaaca 231 ||||||||||||||||||||| Sbjct: 589 ccaacaggctcaggaaaaaca 609
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 454 gatgtatctggtgaaggtgttcaacaggc 482 |||||||||||||||||||| || ||||| Sbjct: 4326230 gatgtatctggtgaaggtgtgcagcaggc 4326202
>gb|CP000107.1| Ehrlichia canis str. Jake, complete genome Length = 1315030 Score = 42.1 bits (21), Expect = 2.3 Identities = 48/57 (84%) Strand = Plus / Plus Query: 454 gatgtatctggtgaaggtgttcaacaggctttgttaaaaatcctagaaggaactgtt 510 ||||| |||||||||||||| ||||| ||||| || ||| | ||||||| |||||| Sbjct: 303097 gatgtgtctggtgaaggtgtacaacaagctttattgaaagttatagaaggtactgtt 303153
>ref|XM_964793.1| PREDICTED: Tribolium castaneum similar to CG4538-PA, isoform A (LOC658404), mRNA Length = 2101 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 296 taacacaggctggatatgtaggtgaagat 324 |||||||||||||||| || ||||||||| Sbjct: 1182 taacacaggctggatacgtcggtgaagat 1210
>emb|BX957219.1| Methanococcus maripaludis S2 complete genome; segment 1/5 Length = 345730 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 223 ggaaaaacattgcttgcaaaa 243 ||||||||||||||||||||| Sbjct: 184414 ggaaaaacattgcttgcaaaa 184394
>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome Length = 5064019 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 454 gatgtatctggtgaaggtgttcaacaggc 482 ||||||||||||||||| || |||||||| Sbjct: 1302754 gatgtatctggtgaaggcgtgcaacaggc 1302782
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 463 ggtgaaggtgttcaacaggctttgttaaaaatcctagaagg 503 ||||||||||||||||| || ||| | |||||| ||||||| Sbjct: 1725473 ggtgaaggtgttcaacaagcattgcttaaaatcttagaagg 1725433
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome Length = 2878529 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 463 ggtgaaggtgttcaacaggctttgttaaaaatcctagaagg 503 ||||||||||||||||| || ||| | |||||| ||||||| Sbjct: 1783193 ggtgaaggtgttcaacaagcattgcttaaaatcttagaagg 1783153
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome Length = 2809422 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 463 ggtgaaggtgttcaacaggctttgttaaaaatcctagaagg 503 ||||||||||||||||| || ||| | |||||| ||||||| Sbjct: 1752493 ggtgaaggtgttcaacaagcattgcttaaaatcttagaagg 1752453
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome Length = 2821361 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 463 ggtgaaggtgttcaacaggctttgttaaaaatcctagaagg 503 ||||||||||||||||| || ||| | |||||| ||||||| Sbjct: 1678533 ggtgaaggtgttcaacaagcattgcttaaaatcttagaagg 1678493
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome Length = 2872769 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 463 ggtgaaggtgttcaacaggctttgttaaaaatcctagaagg 503 ||||||||||||||||| || ||| | |||||| ||||||| Sbjct: 1775330 ggtgaaggtgttcaacaagcattgcttaaaatcttagaagg 1775290
>gb|AC151296.4| Mus musculus BAC clone RP23-127M7 from chromosome 8, complete sequence Length = 210633 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 560 tacagatagacacaaaagaca 580 ||||||||||||||||||||| Sbjct: 30096 tacagatagacacaaaagaca 30116
>dbj|AK051713.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130067E14 product:unclassifiable, full insert sequence Length = 3258 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 560 tacagatagacacaaaagaca 580 ||||||||||||||||||||| Sbjct: 594 tacagatagacacaaaagaca 614
>dbj|AB052362.2| Mus musculus RrasGAP-3 gene for R-ras RTPase activating protein-3, complete cds Length = 30207 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 gataatgtagagatagataaa 189 ||||||||||||||||||||| Sbjct: 14057 gataatgtagagatagataaa 14077
>gb|AC078832.7| Staphylococcus aureus clone sabac-135, complete sequence Length = 44901 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 463 ggtgaaggtgttcaacaggctttgttaaaaatcctagaagg 503 ||||||||||||||||| || ||| | |||||| ||||||| Sbjct: 12337 ggtgaaggtgttcaacaagcattgcttaaaatcttagaagg 12297
>gb|AC127285.4| Mus musculus BAC clone RP23-336P20 from chromosome 8, complete sequence Length = 232127 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 217 ggctcaggaaaaacattgctt 237 ||||||||||||||||||||| Sbjct: 205398 ggctcaggaaaaacattgctt 205418
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 450 tagagatgtatctggtgaaggtgttcaacaggctttgttaaaaat 494 ||||||||| || || ||||| || || ||||||||||||||||| Sbjct: 3244754 tagagatgtgtccggggaaggagtacagcaggctttgttaaaaat 3244710 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 580 attcttttcatatgtggtggtgcttttgt 608 ||||| ||||| ||||||||||||||||| Sbjct: 3244624 attctcttcatctgtggtggtgcttttgt 3244596
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 463 ggtgaaggtgttcaacaggctttgttaaaaatcctagaagg 503 ||||||||||||||||| || ||| | |||||| ||||||| Sbjct: 1745821 ggtgaaggtgttcaacaagcattgcttaaaatcttagaagg 1745781
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome Length = 2814816 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 463 ggtgaaggtgttcaacaggctttgttaaaaatcctagaagg 503 ||||||||||||||||| || ||| | |||||| ||||||| Sbjct: 1706800 ggtgaaggtgttcaacaagcattgcttaaaatcttagaagg 1706760
>gb|AC134613.5| Mus musculus BAC clone RP23-133J23 from 8, complete sequence Length = 187148 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 gataatgtagagatagataaa 189 ||||||||||||||||||||| Sbjct: 163080 gataatgtagagatagataaa 163060
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence Length = 2906179 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 454 gatgtatctggtgaaggtgttcaac 478 ||||||||| ||||||||||||||| Sbjct: 2568108 gatgtatctcgtgaaggtgttcaac 2568132
>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome Length = 2902619 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 463 ggtgaaggtgttcaacaggctttgttaaaaatcctagaagg 503 ||||||||||||||||| || ||| | |||||| ||||||| Sbjct: 1817439 ggtgaaggtgttcaacaagcattgcttaaaatcttagaagg 1817399
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome Length = 2178400 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 tccaacaggctcaggaaaaac 230 ||||||||||||||||||||| Sbjct: 325594 tccaacaggctcaggaaaaac 325574
>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome Length = 1767403 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 400 atagatgaagtagataaaata 420 ||||||||||||||||||||| Sbjct: 1455922 atagatgaagtagataaaata 1455902
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 289 acatcattaacacaggctggatatgtaggtgaagatgtaga 329 ||||| |||||| | ||||||||||| || ||||||||||| Sbjct: 4427850 acatctttaacagaagctggatatgttggggaagatgtaga 4427810 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 454 gatgtatctggtgaaggtgttcaacaggc 482 |||||||||||||||||||| || ||||| Sbjct: 4427685 gatgtatctggtgaaggtgtgcagcaggc 4427657
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 454 gatgtatctggtgaaggtgttcaacaggc 482 |||||||||||||||||||| || ||||| Sbjct: 4281785 gatgtatctggtgaaggtgtgcagcaggc 4281757
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 454 gatgtatctggtgaaggtgttcaacaggc 482 |||||||||||||||||||| || ||||| Sbjct: 4235053 gatgtatctggtgaaggtgtgcagcaggc 4235025
>gb|AC134623.5| Mus musculus BAC clone RP23-20K21 from 8, complete sequence Length = 234976 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 gataatgtagagatagataaa 189 ||||||||||||||||||||| Sbjct: 199978 gataatgtagagatagataaa 199998
>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome Length = 2742531 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 463 ggtgaaggtgttcaacaggctttgttaaaaatcctagaagg 503 ||||||||||||||||| || ||| | |||||| ||||||| Sbjct: 1654423 ggtgaaggtgttcaacaagcattgcttaaaatcttagaagg 1654383
>gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome Length = 1796226 Score = 40.1 bits (20), Expect = 8.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 283 gatgcgacatcattaacacaggctggatatgtaggtgaagatgt 326 |||||||||||||| ||| |||| || ||||| ||||| ||||| Sbjct: 546178 gatgcgacatcattgacagaggcaggttatgtgggtgaggatgt 546221
>ref|XM_475757.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1221 Score = 40.1 bits (20), Expect = 8.9 Identities = 101/128 (78%) Strand = Plus / Plus Query: 199 cttctgatgggtccaacaggctcaggaaaaacattgcttgcaaaaacattagcacgcatt 258 |||||||| || || ||||| ||||| |||||| || | |||||||| ||||| || || Sbjct: 73 cttctgattgggccgacagggtcaggtaaaacactgttagcaaaaactttagctcgattt 132 Query: 259 gtaaatgtaccattcgttatagctgatgcgacatcattaacacaggctggatatgtaggt 318 | |||| ||||| || || |||||||| || || | ||||||||||| ||| |||| Sbjct: 133 gccgatgttccatttgtgattgctgatgcaactgcaattacacaggctgggtattcaggt 192 Query: 319 gaagatgt 326 |||||||| Sbjct: 193 gaagatgt 200
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 8.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 58 aaggttctatcagtagccgtatacaaccactacaag 93 |||||||| ||||||| || ||||||||||||||| Sbjct: 4185397 aaggttctggcagtagcggtgtacaaccactacaag 4185362
>gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome Length = 1838554 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 gatgtatctggtgaaggtgt 473 |||||||||||||||||||| Sbjct: 693595 gatgtatctggtgaaggtgt 693614
>gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome Length = 1899877 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 gatgtatctggtgaaggtgt 473 |||||||||||||||||||| Sbjct: 710942 gatgtatctggtgaaggtgt 710961
>gb|AC099035.2| Drosophila melanogaster clone BACR37H13, complete sequence Length = 175448 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 taacgcaactgtacagaaag 121 |||||||||||||||||||| Sbjct: 33034 taacgcaactgtacagaaag 33015
>gb|AC137608.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009C07, complete sequence Length = 148731 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 ataaaataacaaagaaggca 432 |||||||||||||||||||| Sbjct: 93385 ataaaataacaaagaaggca 93404
>gb|AE006538.1| Streptococcus pyogenes M1 GAS, section 67 of 167 of the complete genome Length = 10721 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 gatgtatctggtgaaggtgt 473 |||||||||||||||||||| Sbjct: 2468 gatgtatctggtgaaggtgt 2487
>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome Length = 1937111 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 gatgtatctggtgaaggtgt 473 |||||||||||||||||||| Sbjct: 756545 gatgtatctggtgaaggtgt 756564
>gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome Length = 1860355 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 gatgtatctggtgaaggtgt 473 |||||||||||||||||||| Sbjct: 733596 gatgtatctggtgaaggtgt 733615
>gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome Length = 1928252 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 gatgtatctggtgaaggtgt 473 |||||||||||||||||||| Sbjct: 725919 gatgtatctggtgaaggtgt 725938
>gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome Length = 1836467 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 gatgtatctggtgaaggtgt 473 |||||||||||||||||||| Sbjct: 732187 gatgtatctggtgaaggtgt 732206
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 8.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 58 aaggttctatcagtagccgtatacaaccactacaag 93 |||||||| ||||||| || ||||||||||||||| Sbjct: 1985789 aaggttctcgcagtagcggtgtacaaccactacaag 1985824
>gb|CP000114.1| Streptococcus agalactiae A909, complete genome Length = 2127839 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 203 tgatgggtccaacaggctcaggaaaaac 230 |||| |||||||| |||||||||||||| Sbjct: 1328582 tgattggtccaactggctcaggaaaaac 1328555 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 gatgtatctggtgaaggtgt 473 |||||||||||||||||||| Sbjct: 1328331 gatgtatctggtgaaggtgt 1328312
>gb|AC115860.9| Mus musculus chromosome 1, clone RP24-290C11, complete sequence Length = 240785 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 393 agtgtacatagatgaagtagataa 416 ||||||||||||| |||||||||| Sbjct: 226822 agtgtacatagattaagtagataa 226845
>gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete genome Length = 686194 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 580 attcttttcatatgtggtggtgcttttg 607 |||||||| || |||||||||||||||| Sbjct: 279848 attctttttatttgtggtggtgcttttg 279821
>ref|XM_448524.1| Candida glabrata CBS138, CAGL0K06919g partial mRNA Length = 1650 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 453 agatgtatctggtgaaggtgttca 476 ||||||||| |||||||||||||| Sbjct: 768 agatgtatcaggtgaaggtgttca 791
>ref|XM_761167.1| Theileria parva strain Muguga chromosome 1 hypothetical protein (TP01_0739) partial mRNA Length = 459 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 agatgaagtagataaaataa 421 |||||||||||||||||||| Sbjct: 132 agatgaagtagataaaataa 151
>gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome Length = 1897573 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 gatgtatctggtgaaggtgt 473 |||||||||||||||||||| Sbjct: 691829 gatgtatctggtgaaggtgt 691848
>emb|AL035410.7|HS591B8 Human DNA sequence from clone RP4-591B8 on chromosome 1p13.1 Contains the 3' end of the TRIM33 gene for tripartite motif-containing 33 and the 5' end of a ribosomal protein L26 (RPL26) pseudogene, complete sequence Length = 142552 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 607 gttgatttggagaagactatttct 630 |||||||||||||||||| ||||| Sbjct: 27915 gttgatttggagaagactgtttct 27938
>gb|AE014252.1| Streptococcus agalactiae 2603V/R section 62 of 100 of the complete genome Length = 22457 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 203 tgatgggtccaacaggctcaggaaaaac 230 |||| |||||||| |||||||||||||| Sbjct: 3599 tgattggtccaactggctcaggaaaaac 3572
>ref|XM_792470.1| PREDICTED: Strongylocentrotus purpuratus similar to ATP-dependent Clp protease ATP-binding subunit ClpX-like, mitochondrial precursor (LOC592972), mRNA Length = 2027 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 65 tatcagtagccgtatacaaccactacaagaga 96 |||| ||||| ||||||||||| ||||||||| Sbjct: 566 tatctgtagctgtatacaaccattacaagaga 597
>emb|Y15953.1|OOY15953 Oenococcus oeni tig, clpX genes Length = 2800 Score = 40.1 bits (20), Expect = 8.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 280 gctgatgcgacatcattaacacaggctggatatgtaggtgaaga 323 |||||||||||| ||||||| ||||||| ||||| || ||||| Sbjct: 1836 gctgatgcgacaacattaaccgaggctggttatgttggcgaaga 1879
>emb|X79005.1|NTEIF4A8D N.tabacum eIF-4A8 gene Length = 4912 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 taaatgtaccattcgttata 279 |||||||||||||||||||| Sbjct: 953 taaatgtaccattcgttata 934
>emb|CR380957.1| Candida glabrata strain CBS138 chromosome K complete sequence Length = 1302002 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 453 agatgtatctggtgaaggtgttca 476 ||||||||| |||||||||||||| Sbjct: 675330 agatgtatcaggtgaaggtgttca 675307
>emb|BX897700.1| Bartonella quintana str. Toulouse, complete genome Length = 1581384 Score = 40.1 bits (20), Expect = 8.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 451 agagatgtatctggtgaaggtgttcaacaggctttgttaaaaat 494 |||||||| || || ||||||||||| || || ||||||||||| Sbjct: 614435 agagatgtttcaggggaaggtgttcagcaagcgttgttaaaaat 614478
>emb|BX897699.1| Bartonella henselae strain Houston-1, complete genome Length = 1931047 Score = 40.1 bits (20), Expect = 8.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 451 agagatgtatctggtgaaggtgttcaacaggctttgttaaaaat 494 |||||||| || || ||||||||||| || || ||||||||||| Sbjct: 691560 agagatgtttcgggggaaggtgttcagcaagcgttgttaaaaat 691603
>emb|AL766850.1|SAG766850 Streptococcus agalactiae NEM316 complete genome, segment 8 Length = 199050 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 203 tgatgggtccaacaggctcaggaaaaac 230 |||| |||||||| |||||||||||||| Sbjct: 120060 tgattggtccaactggctcaggaaaaac 120033 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 gatgtatctggtgaaggtgt 473 |||||||||||||||||||| Sbjct: 119809 gatgtatctggtgaaggtgt 119790
>emb|AL136922.1|HSM801887 Homo sapiens mRNA; cDNA DKFZp586J151 (from clone DKFZp586J151) Length = 3129 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 caggctggatatgtaggtgaagat 324 ||||||||||||||||| |||||| Sbjct: 1140 caggctggatatgtaggcgaagat 1163
>emb|AJ006267.3|HSAJ6267 Homo sapiens mRNA for ClpX-like protein Length = 2351 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 caggctggatatgtaggtgaagat 324 ||||||||||||||||| |||||| Sbjct: 1042 caggctggatatgtaggcgaagat 1065
>gb|AC068213.7| Homo sapiens chromosome 15, clone RP11-628M2, complete sequence Length = 146606 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 caggctggatatgtaggtgaagat 324 ||||||||||||||||| |||||| Sbjct: 138741 caggctggatatgtaggcgaagat 138764
>gb|AC149043.3| Uncultured bacterium zdt-44a23 clone zdt-44a23, complete sequence Length = 35946 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 302 aggctggatatgtaggtgaagatgtaga 329 ||||||| |||||||||||||| ||||| Sbjct: 6441 aggctggttatgtaggtgaagacgtaga 6414
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome Length = 5057531 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 gtagccgtatacaaccactacaag 93 ||||| |||||||||||||||||| Sbjct: 2068394 gtagcggtatacaaccactacaag 2068417
>gb|AC099566.2| Homo sapiens chromosome 1 clone RP4-798D13, complete sequence Length = 130325 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 498 agaaggaactgttgtcacca 517 |||||||||||||||||||| Sbjct: 39705 agaaggaactgttgtcacca 39724
>gb|AE010023.1| Streptococcus pyogenes strain MGAS8232, section 71 of 173 of the complete genome Length = 10719 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 gatgtatctggtgaaggtgt 473 |||||||||||||||||||| Sbjct: 2468 gatgtatctggtgaaggtgt 2487
>gb|AY069206.1| Drosophila melanogaster GH26090 full length cDNA Length = 2738 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 taacgcaactgtacagaaag 121 |||||||||||||||||||| Sbjct: 2064 taacgcaactgtacagaaag 2045
>gb|CP000237.1| Neorickettsia sennetsu strain Miyayama, complete genome Length = 859006 Score = 40.1 bits (20), Expect = 8.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 223 ggaaaaacattgcttgcaaaaacattagcacgcattgtaaatgtaccattcg 274 ||||||||| | ||||||||||||| |||||| || | |||||||| |||| Sbjct: 670364 ggaaaaacactttttgcaaaaacattggcacgctttttgaatgtaccgttcg 670415
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome Length = 2174500 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 caacaggctttgttaaaaatccta 498 ||||||||||| |||||||||||| Sbjct: 1660265 caacaggcttttttaaaaatccta 1660288
>gb|AC013553.14| Homo sapiens chromosome 15, clone RP11-325L12, complete sequence Length = 184864 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 301 caggctggatatgtaggtgaagat 324 ||||||||||||||||| |||||| Sbjct: 166968 caggctggatatgtaggcgaagat 166945
>gb|AC008351.4|AC008351 Drosophila melanogaster, chromosome 2R, region 59A-59C, BAC clone BACR09K23, complete sequence Length = 191438 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 taacgcaactgtacagaaag 121 |||||||||||||||||||| Sbjct: 174488 taacgcaactgtacagaaag 174469
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 ataaaataacaaagaaggca 432 |||||||||||||||||||| Sbjct: 28939092 ataaaataacaaagaaggca 28939111
>emb|BX649531.7| Zebrafish DNA sequence from clone CH211-285L4 in linkage group 15, complete sequence Length = 185865 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 agatagataaaagcaatgta 198 |||||||||||||||||||| Sbjct: 92909 agatagataaaagcaatgta 92928
>gb|AC007849.24| Homo sapiens 3 BAC RP11-3K16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 199835 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 agatagataaaagcaatgta 198 |||||||||||||||||||| Sbjct: 157926 agatagataaaagcaatgta 157945
>gb|AC083870.2|AC083870 Homo sapiens chromosome 7 clone RP11-248K17, complete sequence Length = 171530 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 aataacaaagaaggcagaga 436 |||||||||||||||||||| Sbjct: 13910 aataacaaagaaggcagaga 13929
>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence Length = 3288558 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 457 gtatctggtgaaggtgttca 476 |||||||||||||||||||| Sbjct: 954525 gtatctggtgaaggtgttca 954544
>gb|AE004606.1| Pseudomonas aeruginosa PAO1, section 167 of 529 of the complete genome Length = 10851 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 gtagccgtatacaaccactacaag 93 ||||| |||||||||||||||||| Sbjct: 4729 gtagcggtatacaaccactacaag 4752
>gb|AE014074.1| Streptococcus pyogenes MGAS315, complete genome Length = 1900521 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 gatgtatctggtgaaggtgt 473 |||||||||||||||||||| Sbjct: 663867 gatgtatctggtgaaggtgt 663886
>gb|AC084297.3| Homo sapiens BAC clone RP11-44H9 from 2, complete sequence Length = 112292 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 ttgttaaaaatcctagaagg 503 |||||||||||||||||||| Sbjct: 74310 ttgttaaaaatcctagaagg 74291
>gb|AC019014.1|AC019014 Homo sapiens clone RP11-221G19 from 7q31, complete sequence Length = 155656 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 aataacaaagaaggcagaga 436 |||||||||||||||||||| Sbjct: 62319 aataacaaagaaggcagaga 62300
>dbj|BA000003.2| Buchnera aphidicola str. APS (Acyrthosiphon pisum) genomic DNA, complete sequence Length = 640681 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 397 tacatagatgaagtagataaaata 420 |||||||||||| ||||||||||| Sbjct: 521181 tacatagatgaaatagataaaata 521204
>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome Length = 3630528 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 gatgtatctggtgaaggtgt 473 |||||||||||||||||||| Sbjct: 2106330 gatgtatctggtgaaggtgt 2106311
>dbj|BA000034.2| Streptococcus pyogenes SSI-1 DNA, complete genome Length = 1894275 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 gatgtatctggtgaaggtgt 473 |||||||||||||||||||| Sbjct: 1232867 gatgtatctggtgaaggtgt 1232848
>emb|BX649618.9| Mouse DNA sequence from clone RP23-159M13 on chromosome X, complete sequence Length = 111079 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 591 atgtggtggtgcttttgttgattt 614 ||||||||||| |||||||||||| Sbjct: 11379 atgtggtggtgtttttgttgattt 11356
>emb|AL731663.12| Mouse DNA sequence from clone RP23-360J20 on chromosome 4, complete sequence Length = 181033 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 556 agtatacagatagacacaaa 575 |||||||||||||||||||| Sbjct: 121236 agtatacagatagacacaaa 121255
>dbj|AK106477.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-C11, full insert sequence Length = 1446 Score = 40.1 bits (20), Expect = 8.9 Identities = 101/128 (78%) Strand = Plus / Plus Query: 199 cttctgatgggtccaacaggctcaggaaaaacattgcttgcaaaaacattagcacgcatt 258 |||||||| || || ||||| ||||| |||||| || | |||||||| ||||| || || Sbjct: 271 cttctgattgggccgacagggtcaggtaaaacactgttagcaaaaactttagctcgattt 330 Query: 259 gtaaatgtaccattcgttatagctgatgcgacatcattaacacaggctggatatgtaggt 318 | |||| ||||| || || |||||||| || || | ||||||||||| ||| |||| Sbjct: 331 gccgatgttccatttgtgattgctgatgcaactgcaattacacaggctgggtattcaggt 390 Query: 319 gaagatgt 326 |||||||| Sbjct: 391 gaagatgt 398
>gb|CP000016.1| Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome Length = 791654 Score = 40.1 bits (20), Expect = 8.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 580 attcttttcatatgtggtggtgcttttgttgatttg 615 |||||||| || ||||||||||||||| ||| |||| Sbjct: 288921 attctttttatttgtggtggtgctttttttggtttg 288956 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 tatgtaggtgaagatgtaga 329 |||||||||||||||||||| Sbjct: 288651 tatgtaggtgaagatgtaga 288670
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 gtagccgtatacaaccactacaag 93 ||||| |||||||||||||||||| Sbjct: 1957675 gtagcggtatacaaccactacaag 1957698
>gb|AE001439.1| Helicobacter pylori J99, complete genome Length = 1643831 Score = 40.1 bits (20), Expect = 8.9 Identities = 38/44 (86%) Strand = Plus / Minus Query: 50 aggctaaaaaggttctatcagtagccgtatacaaccactacaag 93 |||||||||||||| | || |||||||| || ||||| |||||| Sbjct: 1412246 aggctaaaaaggttttttccgtagccgtgtataaccattacaag 1412203
>gb|AC132456.5| Mus musculus BAC clone RP23-134L6 from 1, complete sequence Length = 204402 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 563 agatagacacaaaagacatt 582 |||||||||||||||||||| Sbjct: 202747 agatagacacaaaagacatt 202728
>emb|CT573073.1| Kuenenia stuttgartiensis genome fragment KUST_C (3 of 5) Length = 893329 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 558 tatacagatagacacaaaagacat 581 ||||||||||||||||||| |||| Sbjct: 553093 tatacagatagacacaaaaaacat 553070
>emb|AL358333.4|CNS05TE4 Human chromosome 14 DNA sequence BAC R-463J10 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 188549 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 agcaatgtacttctgatggg 209 |||||||||||||||||||| Sbjct: 162942 agcaatgtacttctgatggg 162923
>gb|AC005650.1|AC005650 Drosophila melanogaster, chromosome 2R, region 59B4-59B7, P1 clone DS02885, complete sequence Length = 60019 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 taacgcaactgtacagaaag 121 |||||||||||||||||||| Sbjct: 8638 taacgcaactgtacagaaag 8657
>gb|AE003459.3| Drosophila melanogaster chromosome 2R, section 67 of 73 of the complete sequence Length = 283700 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 taacgcaactgtacagaaag 121 |||||||||||||||||||| Sbjct: 35517 taacgcaactgtacagaaag 35498
>emb|AJ276971.1|HSA276971 Homo sapiens partial CLPX gene, exon 8 Length = 195 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 caggctggatatgtaggtgaagat 324 ||||||||||||||||| |||||| Sbjct: 93 caggctggatatgtaggcgaagat 116
>gb|AC109143.19| Mus musculus chromosome 1, clone RP23-105D15, complete sequence Length = 211924 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 393 agtgtacatagatgaagtagataa 416 ||||||||||||| |||||||||| Sbjct: 67596 agtgtacatagattaagtagataa 67619
>gb|AE016830.1| Enterococcus faecalis V583, complete genome Length = 3218031 Score = 40.1 bits (20), Expect = 8.9 Identities = 50/60 (83%) Strand = Plus / Minus Query: 452 gagatgtatctggtgaaggtgttcaacaggctttgttaaaaatcctagaaggaactgttg 511 ||||||| || ||||| ||||||||||| || || ||||||| || |||||||| |||| Sbjct: 1858266 gagatgtttcaggtgagggtgttcaacaagccttactaaaaattcttgaaggaacagttg 1858207
>ref|NM_006660.3| Homo sapiens ClpX caseinolytic peptidase X homolog (E. coli) (CLPX), mRNA Length = 2351 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 caggctggatatgtaggtgaagat 324 ||||||||||||||||| |||||| Sbjct: 1042 caggctggatatgtaggcgaagat 1065
>emb|AL929465.6| Mouse DNA sequence from clone RP23-395N7 on chromosome 4, complete sequence Length = 197037 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 556 agtatacagatagacacaaa 575 |||||||||||||||||||| Sbjct: 159070 agtatacagatagacacaaa 159089
>gb|AC124344.6| Mus musculus BAC clone RP24-448A7 from 3, complete sequence Length = 219818 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gataatgtagagatagataa 188 |||||||||||||||||||| Sbjct: 106873 gataatgtagagatagataa 106892
>gb|AC133102.4| Mus musculus BAC clone RP23-173H19 from 1, complete sequence Length = 199590 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 563 agatagacacaaaagacatt 582 |||||||||||||||||||| Sbjct: 35637 agatagacacaaaagacatt 35618
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 aaaagcaatgtacttctgat 206 |||||||||||||||||||| Sbjct: 89500 aaaagcaatgtacttctgat 89519
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 65 tatcagtagccgtatacaaccactacaa 92 |||| ||||||||||||||||| ||||| Sbjct: 748752 tatccgtagccgtatacaaccattacaa 748725
>gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete genome Length = 1796846 Score = 40.1 bits (20), Expect = 8.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 283 gatgcgacatcattaacacaggctggatatgtaggtgaagatgt 326 |||||||||||||| ||| |||| || ||||| ||||| ||||| Sbjct: 550994 gatgcgacatcattgacagaggcaggttatgtgggtgaggatgt 551037
>dbj|AB000394.1| Ipomoea purpurea DNA, LTR retrotransposon RTip1 Length = 12422 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aaaaggttctatcagtagcc 75 |||||||||||||||||||| Sbjct: 6259 aaaaggttctatcagtagcc 6278 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,660,706 Number of Sequences: 3902068 Number of extensions: 6660706 Number of successful extensions: 126321 Number of sequences better than 10.0: 196 Number of HSP's better than 10.0 without gapping: 195 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 123705 Number of HSP's gapped (non-prelim): 2614 length of query: 652 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 629 effective length of database: 17,143,297,704 effective search space: 10783134255816 effective search space used: 10783134255816 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
