ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags26g24 |
|---|---|
| Clone Library Name | barley_pub |
>RS24_ARATH (Q9SS17) 40S ribosomal protein S24| Length = 133 Score = 137 bits (345), Expect = 7e-33 Identities = 63/80 (78%), Positives = 74/80 (92%) Frame = +3 Query: 57 ATTXVTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFK 236 A VT+RTRKFMTNRLL+RKQFV++V+HPGRANVSKAELK++L+++YEVKDPN IFVFK Sbjct: 2 AEKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFK 61 Query: 237 FRTHFGGGKSXGFGLIYDNL 296 FRTHFGGGKS GFGLIYD + Sbjct: 62 FRTHFGGGKSSGFGLIYDTV 81
>RS24_XENLA (P02377) 40S ribosomal protein S24 (S19)| Length = 132 Score = 108 bits (269), Expect = 5e-24 Identities = 49/76 (64%), Positives = 65/76 (85%) Frame = +3 Query: 69 VTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTH 248 VT+RTRKFMTNRLL RKQ V++V+HPG+A V K E++++L+K+Y+ P+ IFVF FRTH Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVFGFRTH 63 Query: 249 FGGGKSXGFGLIYDNL 296 FGGGK+ GFG+IYD+L Sbjct: 64 FGGGKTTGFGMIYDSL 79
>RS24_RAT (P62850) 40S ribosomal protein S24| Length = 133 Score = 108 bits (269), Expect = 5e-24 Identities = 49/76 (64%), Positives = 65/76 (85%) Frame = +3 Query: 69 VTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTH 248 VT+RTRKFMTNRLL RKQ V++V+HPG+A V K E++++L+K+Y+ P+ IFVF FRTH Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVFGFRTH 63 Query: 249 FGGGKSXGFGLIYDNL 296 FGGGK+ GFG+IYD+L Sbjct: 64 FGGGKTTGFGMIYDSL 79
>RS24_MOUSE (P62849) 40S ribosomal protein S24| Length = 133 Score = 108 bits (269), Expect = 5e-24 Identities = 49/76 (64%), Positives = 65/76 (85%) Frame = +3 Query: 69 VTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTH 248 VT+RTRKFMTNRLL RKQ V++V+HPG+A V K E++++L+K+Y+ P+ IFVF FRTH Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVFGFRTH 63 Query: 249 FGGGKSXGFGLIYDNL 296 FGGGK+ GFG+IYD+L Sbjct: 64 FGGGKTTGFGMIYDSL 79
>RS24_MESAU (P62848) 40S ribosomal protein S24 (Ribosomal protein S19)| Length = 133 Score = 108 bits (269), Expect = 5e-24 Identities = 49/76 (64%), Positives = 65/76 (85%) Frame = +3 Query: 69 VTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTH 248 VT+RTRKFMTNRLL RKQ V++V+HPG+A V K E++++L+K+Y+ P+ IFVF FRTH Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVFGFRTH 63 Query: 249 FGGGKSXGFGLIYDNL 296 FGGGK+ GFG+IYD+L Sbjct: 64 FGGGKTTGFGMIYDSL 79
>RS24_HUMAN (P62847) 40S ribosomal protein S24| Length = 133 Score = 108 bits (269), Expect = 5e-24 Identities = 49/76 (64%), Positives = 65/76 (85%) Frame = +3 Query: 69 VTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTH 248 VT+RTRKFMTNRLL RKQ V++V+HPG+A V K E++++L+K+Y+ P+ IFVF FRTH Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVFGFRTH 63 Query: 249 FGGGKSXGFGLIYDNL 296 FGGGK+ GFG+IYD+L Sbjct: 64 FGGGKTTGFGMIYDSL 79
>RS24_PONPY (Q5RAQ8) 40S ribosomal protein S24| Length = 131 Score = 108 bits (269), Expect = 5e-24 Identities = 49/76 (64%), Positives = 65/76 (85%) Frame = +3 Query: 69 VTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTH 248 VT+RTRKFMTNRLL RKQ V++V+HPG+A V K E++++L+K+Y+ P+ IFVF FRTH Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVFGFRTH 63 Query: 249 FGGGKSXGFGLIYDNL 296 FGGGK+ GFG+IYD+L Sbjct: 64 FGGGKTTGFGMIYDSL 79
>RS24_BOVIN (Q56JU9) 40S ribosomal protein S24| Length = 131 Score = 108 bits (269), Expect = 5e-24 Identities = 49/76 (64%), Positives = 65/76 (85%) Frame = +3 Query: 69 VTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTH 248 VT+RTRKFMTNRLL RKQ V++V+HPG+A V K E++++L+K+Y+ P+ IFVF FRTH Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVFGFRTH 63 Query: 249 FGGGKSXGFGLIYDNL 296 FGGGK+ GFG+IYD+L Sbjct: 64 FGGGKTTGFGMIYDSL 79
>RS24_MACFA (Q4R5H5) 40S ribosomal protein S24| Length = 131 Score = 106 bits (265), Expect = 1e-23 Identities = 49/76 (64%), Positives = 64/76 (84%) Frame = +3 Query: 69 VTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTH 248 VT+RTRKFMTNRLL RKQ V+ V+HPG+A V K E++++L+K+Y+ P+ IFVF FRTH Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIGVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVFGFRTH 63 Query: 249 FGGGKSXGFGLIYDNL 296 FGGGK+ GFG+IYD+L Sbjct: 64 FGGGKTTGFGMIYDSL 79
>RS24_RHIRA (P14249) 40S ribosomal protein S24| Length = 148 Score = 105 bits (263), Expect = 2e-23 Identities = 52/91 (57%), Positives = 66/91 (72%) Frame = +3 Query: 24 SEVESAMADAKATTXVTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYE 203 SE M +A VT+RTRKF+TNRLL RKQ V++VIHPG ANVSK EL+ ++ K+Y+ Sbjct: 9 SEWMQKMRTKRADAAVTIRTRKFLTNRLLQRKQMVVDVIHPGLANVSKDELRSKIGKMYK 68 Query: 204 VKDPNCIFVFKFRTHFGGGKSXGFGLIYDNL 296 D + VF F+THFGGGK+ GF LIYDN+ Sbjct: 69 A-DKEVVSVFGFKTHFGGGKTTGFALIYDNV 98
>RS24_SPOFR (Q962Q6) 40S ribosomal protein S24| Length = 132 Score = 103 bits (258), Expect = 9e-23 Identities = 48/75 (64%), Positives = 63/75 (84%) Frame = +3 Query: 72 TLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTHF 251 T+RTRKFMTNRLLARKQ V +V+HPG+ VSK E++++L+K+Y+V P+ +FVF F+T+F Sbjct: 7 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVFGFKTNF 65 Query: 252 GGGKSXGFGLIYDNL 296 GGGKS GF LIYD L Sbjct: 66 GGGKSTGFALIYDTL 80
>RS24_ICTPU (Q90YQ0) 40S ribosomal protein S24| Length = 131 Score = 102 bits (254), Expect = 2e-22 Identities = 46/76 (60%), Positives = 63/76 (82%) Frame = +3 Query: 69 VTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTH 248 VTLRTRKFMTNRLL RKQ VL+V+HPG+A V K E++++L+K+Y+ P+ +FVF F+T Sbjct: 5 VTLRTRKFMTNRLLQRKQMVLDVLHPGKATVPKTEIREKLAKMYKT-TPDVVFVFGFKTQ 63 Query: 249 FGGGKSXGFGLIYDNL 296 FGGGK+ GF ++YD+L Sbjct: 64 FGGGKTTGFAMVYDSL 79
>RS24_ORYLA (Q9W6X9) 40S ribosomal protein S24| Length = 132 Score = 101 bits (252), Expect = 4e-22 Identities = 45/76 (59%), Positives = 63/76 (82%) Frame = +3 Query: 69 VTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTH 248 VT+RTRKFMTNRLL RKQ V++V+HPG+A V K E++++L+K+Y+ P+ +FVF FRT Sbjct: 5 VTIRTRKFMTNRLLQRKQMVVDVLHPGKATVPKTEIREKLAKMYKT-TPDVVFVFGFRTQ 63 Query: 249 FGGGKSXGFGLIYDNL 296 FGGGK+ GF ++YD+L Sbjct: 64 FGGGKTTGFAMVYDSL 79
>RS24_FUGRU (O42387) 40S ribosomal protein S24| Length = 132 Score = 101 bits (251), Expect = 6e-22 Identities = 45/76 (59%), Positives = 63/76 (82%) Frame = +3 Query: 69 VTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTH 248 VT+RTRKFMTNRLL RKQ V++V+HPG+A V K E++++L+K+Y+ P+ +FVF FRT Sbjct: 5 VTVRTRKFMTNRLLQRKQMVVDVLHPGKATVPKTEIREKLAKMYKT-TPDVVFVFGFRTQ 63 Query: 249 FGGGKSXGFGLIYDNL 296 FGGGK+ GF ++YD+L Sbjct: 64 FGGGKTTGFAMVYDSL 79
>RS24B_SCHPO (O59865) 40S ribosomal protein S24-B| Length = 133 Score = 100 bits (249), Expect = 9e-22 Identities = 44/75 (58%), Positives = 62/75 (82%) Frame = +3 Query: 69 VTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTH 248 VT+RTRKFMTNRLL RKQ V++++HPG+AN+SK E++++L+++Y+ D C+ F RTH Sbjct: 4 VTIRTRKFMTNRLLQRKQMVVDILHPGKANLSKNEIREKLAQMYKT-DSECVQAFGLRTH 62 Query: 249 FGGGKSXGFGLIYDN 293 FGGG+S GF LIYD+ Sbjct: 63 FGGGRSTGFALIYDS 77
>RS24_YEAST (P26782) 40S ribosomal protein S24 (RP50)| Length = 134 Score = 96.3 bits (238), Expect = 2e-20 Identities = 45/76 (59%), Positives = 64/76 (84%) Frame = +3 Query: 69 VTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTH 248 VT+RTRK ++N LLARKQFV++V+HP RANVSK EL+++L++VY+ + + + VF FRT Sbjct: 4 VTIRTRKVISNPLLARKQFVVDVLHPNRANVSKDELREKLAEVYKA-EKDAVSVFGFRTQ 62 Query: 249 FGGGKSXGFGLIYDNL 296 FGGGKS GFGL+Y+++ Sbjct: 63 FGGGKSVGFGLVYNSV 78
>RS24A_SCHPO (O13784) 40S ribosomal protein S24-A| Length = 133 Score = 95.5 bits (236), Expect = 3e-20 Identities = 41/76 (53%), Positives = 62/76 (81%) Frame = +3 Query: 69 VTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTH 248 VT+RTRKFMTNRLL RKQ V++++HPG+AN+SK +L+++L ++Y+ D + + F RTH Sbjct: 4 VTIRTRKFMTNRLLQRKQMVVDILHPGKANISKNDLREKLGQMYKT-DASAVQAFGLRTH 62 Query: 249 FGGGKSXGFGLIYDNL 296 +GGG++ GF LIYD++ Sbjct: 63 YGGGRTTGFALIYDDV 78
>RS24_PYRFU (Q8U442) 30S ribosomal protein S24e| Length = 99 Score = 44.3 bits (103), Expect = 8e-05 Identities = 20/73 (27%), Positives = 40/73 (54%) Frame = +3 Query: 75 LRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTHFG 254 +R ++ N+L+ RK+ E+ HPG S+ ++K +L + ++ +P + R++FG Sbjct: 3 IRIKEIKENKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDL-NPETTVIQYIRSYFG 61 Query: 255 GGKSXGFGLIYDN 293 S G+ YD+ Sbjct: 62 SYISKGYAKAYDS 74
>RS24_PYRKO (Q5JIY8) 30S ribosomal protein S24e| Length = 98 Score = 43.1 bits (100), Expect = 2e-04 Identities = 20/72 (27%), Positives = 38/72 (52%) Frame = +3 Query: 75 LRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTHFG 254 ++ + N+LL RK+ +V+H G S+ +K +L + ++ DPN + R++FG Sbjct: 3 IKVTEIRENKLLGRKEIYFDVLHEGEPTPSREAVKGKLVAMLDL-DPNTTVIQYIRSYFG 61 Query: 255 GGKSXGFGLIYD 290 S G+ Y+ Sbjct: 62 SNVSKGYAKAYE 73
>RS24_PYRHO (P58746) 30S ribosomal protein S24e| Length = 99 Score = 42.0 bits (97), Expect = 4e-04 Identities = 19/63 (30%), Positives = 35/63 (55%) Frame = +3 Query: 99 NRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTHFGGGKSXGFG 278 N+L+ RK+ E+ HPG S+ ++K +L + ++ +P + R++FG KS G+ Sbjct: 11 NKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDL-NPETTVIQYIRSYFGSYKSKGYA 69 Query: 279 LIY 287 Y Sbjct: 70 KYY 72
>RS24_PYRAB (Q9UY20) 30S ribosomal protein S24e| Length = 99 Score = 42.0 bits (97), Expect = 4e-04 Identities = 19/63 (30%), Positives = 35/63 (55%) Frame = +3 Query: 99 NRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTHFGGGKSXGFG 278 N+L+ RK+ E+ HPG S+ ++K +L + ++ +P + R++FG KS G+ Sbjct: 11 NKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDL-NPETTVIQYIRSYFGSYKSKGYA 69 Query: 279 LIY 287 Y Sbjct: 70 KYY 72
>RS24_PYRAE (Q8ZV65) 30S ribosomal protein S24e| Length = 121 Score = 37.4 bits (85), Expect = 0.010 Identities = 17/65 (26%), Positives = 40/65 (61%) Frame = +3 Query: 99 NRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTHFGGGKSXGFG 278 N+LLAR++ ++E +H + ++ +++ ++K + D + +FV + +T FG G+S Sbjct: 14 NKLLARRELLVEAVHQNASTPTRQSVREWVAKQLGI-DISNVFVRRIKTEFGRGRSLAEV 72 Query: 279 LIYDN 293 +Y++ Sbjct: 73 HVYND 77
>RS24_NANEQ (Q74M50) 30S ribosomal protein S24e| Length = 94 Score = 37.0 bits (84), Expect = 0.013 Identities = 17/66 (25%), Positives = 38/66 (57%) Frame = +3 Query: 99 NRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTHFGGGKSXGFG 278 N+L R +++++V HP ++ E K++++++ V D N + + K + +G S + Sbjct: 12 NKLFDRTEYIIQVEHPKEKTPTREEAKEKIAEMLNV-DKNKLVIKKIVSKYGLPYSFIYA 70 Query: 279 LIYDNL 296 +YDN+ Sbjct: 71 RVYDNI 76
>HEM3_GEOKA (Q5KWK6) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 309 Score = 30.4 bits (67), Expect = 1.2 Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%) Frame = -3 Query: 212 VLDLVHLGQPILELRLGDVGAAG--VDDLEHELLAG 111 V ++V G +L++ L VG G V ++EHELLAG Sbjct: 36 VKEIVTKGDRVLDVTLSKVGGKGLFVKEIEHELLAG 71
>PQQE_METCA (Q608P0) Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone| biosynthesis protein E) Length = 373 Score = 29.6 bits (65), Expect = 2.0 Identities = 13/44 (29%), Positives = 28/44 (63%) Frame = -3 Query: 206 DLVHLGQPILELRLGDVGAAGVDDLEHELLAGEQAVGHELAGAE 75 +L+ G + E+R+ ++ +AG+D ++ + + E+ + ELAG E Sbjct: 91 NLITSGYGLDEVRIAELKSAGLDHIQVSIQSPEKLLNDELAGTE 134
>SYA_THIFE (Q56273) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 877 Score = 28.5 bits (62), Expect = 4.5 Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 12/84 (14%) Frame = -3 Query: 293 VVVDETESXGLAASEVG--AELEDEDAV-GVLDL--------VHLGQPIL-ELRLGDVGA 150 V++D T G + + G EL+ DA+ V D VHLG+ L++GD+ Sbjct: 491 VILDRTPFYGESGGQAGDRGELQSNDALFAVTDTQKPMGHLHVHLGRVESGRLQIGDMVV 550 Query: 149 AGVDDLEHELLAGEQAVGHELAGA 78 A VD++ A + H L A Sbjct: 551 ASVDEVARRATAAHHSATHLLHAA 574
>PQQE_ACICA (P07782) Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone| biosynthesis protein E) (Coenzyme PQQ synthesis protein III) Length = 384 Score = 28.5 bits (62), Expect = 4.5 Identities = 14/54 (25%), Positives = 27/54 (50%) Frame = -3 Query: 206 DLVHLGQPILELRLGDVGAAGVDDLEHELLAGEQAVGHELAGAEGDXRRGLGVC 45 +L+ G + E R+ D+ AG+D ++ A + V LAG++ + +C Sbjct: 87 NLITSGMGLTEQRIADLKQAGLDHIQVSFQASDPVVNDALAGSKHAFEQKYEMC 140
>Y4160_CLOAB (P33747) Hypothetical protein CAP0160 precursor| Length = 967 Score = 28.1 bits (61), Expect = 5.9 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +3 Query: 90 FMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVK 209 ++TN L RK+ L V N+ K KD+L+K E K Sbjct: 200 YVTNLLSKRKKADLVVTLDNSMNIDKTTFKDKLNKYIESK 239
>KUP_GLUOX (Q5FQL0) Probable potassium transport system protein kup| Length = 675 Score = 27.7 bits (60), Expect = 7.8 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = -3 Query: 128 HELLAGEQAVGHELAGAEGDXRRGLGVCHG*FDLAPRWA 12 HE+ GE+ GHE G LGV +G +P +A Sbjct: 43 HEIGGGEEGSGHERPAGMGALLAVLGVVYGDIGTSPLYA 81
>SYA_AZOSE (Q5P7Q3) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 873 Score = 27.7 bits (60), Expect = 7.8 Identities = 18/60 (30%), Positives = 28/60 (46%) Frame = -3 Query: 227 EDAVGVLDLVHLGQPILELRLGDVGAAGVDDLEHELLAGEQAVGHELAGAEGDXRRGLGV 48 E+ VL L G P++EL+ GD+G +D+ +G Q G G+ R G+ Sbjct: 463 EERGTVLALYKDGAPVVELQEGDIGVVVLDNTPFYAESGGQ------VGDRGELRGSAGI 516
>ARR13_ARATH (Q9ZVD3) Putative two-component response regulator ARR13| Length = 572 Score = 27.7 bits (60), Expect = 7.8 Identities = 15/53 (28%), Positives = 26/53 (49%) Frame = +3 Query: 57 ATTXVTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDP 215 A V TR+ + + L + FV V+H GR ++ KD + + +K+P Sbjct: 257 AIMNVPYLTRENVASHLQKYRLFVKRVVHQGRFSMLSDRGKDSMFRQTHIKEP 309
>PMM_CAEEL (Q9XUE6) Probable phosphomannomutase (EC 5.4.2.8) (PMM)| Length = 245 Score = 27.7 bits (60), Expect = 7.8 Identities = 16/35 (45%), Positives = 21/35 (60%) Frame = -3 Query: 164 GDVGAAGVDDLEHELLAGEQAVGHELAGAEGDXRR 60 GD A G +D HE+ A E+ VGH + G E D R+ Sbjct: 204 GDKTAPGGND--HEIFADERTVGHTVEGPE-DTRK 235
>PURT_METJA (Q58881) Probable phosphoribosylglycinamide formyltransferase 2 (EC| 2.1.2.-) (GART 2) (GAR transformylase 2) (5'-phosphoribosylglycinamide transformylase 2) (Formate-dependent GAR transformylase) Length = 393 Score = 27.7 bits (60), Expect = 7.8 Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 5/94 (5%) Frame = +3 Query: 21 WSEVESAMADAKATTXVTLRTRKFMTN-RLLARKQFVLEVIHPGRANVSKAELKDRLSKV 197 +SEV D T +T +F + R + ++IHPG ++V KAE+ ++ + Sbjct: 280 FSEVSPRPHDTGMVTMITQEMSEFEIHVRAILGLPVSTKLIHPGASHVIKAEI-NKYAPK 338 Query: 198 YEVKD----PNCIFVFKFRTHFGGGKSXGFGLIY 287 Y ++D PN + + G+ G L Y Sbjct: 339 YHIEDALKVPNTKLRLFGKPNAKVGRRMGVALAY 372 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.129 0.450 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,743,939 Number of Sequences: 219361 Number of extensions: 374667 Number of successful extensions: 1763 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 1715 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1745 length of database: 80,573,946 effective HSP length: 74 effective length of database: 64,341,232 effective search space used: 1544189568 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
