| Clone Name | bags26g20 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_470738.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1836 Score = 480 bits (242), Expect = e-132 Identities = 443/510 (86%) Strand = Plus / Plus Query: 1 agaggctcaatgcagtaccacctcggatagcccgtggttttgtatccgggttctcagttc 60 |||| |||||||||||||| || |||| ||| |||||||||| | ||||||||||| | Sbjct: 1235 agagactcaatgcagtacctcccaggattacccatggttttgtacctgggttctcagtcc 1294 Query: 61 aaacatatcaggacgacaataaactctggcagaaacatgttaatgcttacaagaaaacca 120 | ||||||| || ||||||||||| |||||||||||| |||| |||||||| || | || Sbjct: 1295 agtcatatcaagatgacaataaactttggcagaaacatattaacgcttacaaaaagatca 1354 Query: 121 atgacttgcttgatactggaaggtaccgcaacataatggacatgaatgcaggtcttggta 180 || ||||||||||||||||||| ||||| |||||||||||||||||||| || ||||||| Sbjct: 1355 ataacttgcttgatactggaagataccgtaacataatggacatgaatgctggccttggta 1414 Query: 181 gctttgctgctgtactggagtctccaaagctgtgggtcatgaatgtcgttccgttcattg 240 | |||||||||| | ||||||| | |||||||||||||||||||| ||||| ||||| Sbjct: 1415 gttttgctgctgcattggagtccacgaagctgtgggtcatgaatgttgttccaaccattg 1474 Query: 241 cagatactaatactttaggtgtaatctatgagcgaggattaataggaatgtatcacgact 300 |||||||| ||| |||||||||||||| ||||| |||||||||||||||||||| || | Sbjct: 1475 cagatacttctacattaggtgtaatctacgagcggggattaataggaatgtatcatgatt 1534 Query: 301 ggtgtgaagggttctctacttacccaaggacatatgacctcatacatgctaacggtgtct 360 |||||||||| || ||||| || |||||||||||||| |||||||||||||||| ||| | Sbjct: 1535 ggtgtgaaggattttctacatatccaaggacatatgatctcatacatgctaacgctgtgt 1594 Query: 361 tcagtttgtaccagaacaaatgtaaatttgaagatatactactggaaatggaccggatct 420 |||| || || |||| || ||||||||||||||||||||| |||||||||||||||||| Sbjct: 1595 tcagcttatatgagaataagtgtaaatttgaagatatactattggaaatggaccggatct 1654 Query: 421 tacgcccagagggcgcagtcataatccgtgacacgattgacgctcttgtaaaggtggaaa 480 |||| |||||||||||||| ||||||||||||| | |||| | ||||||||||||||| | Sbjct: 1655 tacgaccagagggcgcagttataatccgtgacaaggttgatgttcttgtaaaggtggaga 1714 Query: 481 aagtagccaatgccatgaggtgggagacaa 510 || |||| || |||||||||||| |||||| Sbjct: 1715 aaatagctaacgccatgaggtggcagacaa 1744
>dbj|AK119277.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-B10, full insert sequence Length = 2538 Score = 472 bits (238), Expect = e-130 Identities = 442/510 (86%) Strand = Plus / Plus Query: 1 agaggctcaatgcagtaccacctcggatagcccgtggttttgtatccgggttctcagttc 60 |||| ||| |||||||||| || |||| ||| |||||||||| | ||||||||||| | Sbjct: 1360 agagactcgatgcagtacctcccaggattacccatggttttgtacctgggttctcagtcc 1419 Query: 61 aaacatatcaggacgacaataaactctggcagaaacatgttaatgcttacaagaaaacca 120 | ||||||| || ||||||||||| |||||||||||| |||| |||||||| || | || Sbjct: 1420 agtcatatcaagatgacaataaactttggcagaaacatattaacgcttacaaaaagatca 1479 Query: 121 atgacttgcttgatactggaaggtaccgcaacataatggacatgaatgcaggtcttggta 180 || ||||||||||||||||||| ||||| |||||||||||||||||||| || ||||||| Sbjct: 1480 ataacttgcttgatactggaagataccgtaacataatggacatgaatgctggccttggta 1539 Query: 181 gctttgctgctgtactggagtctccaaagctgtgggtcatgaatgtcgttccgttcattg 240 | |||||||||| | ||||||| | |||||||||||||||||||| ||||| ||||| Sbjct: 1540 gttttgctgctgcattggagtccacgaagctgtgggtcatgaatgttgttccaaccattg 1599 Query: 241 cagatactaatactttaggtgtaatctatgagcgaggattaataggaatgtatcacgact 300 |||||||| ||| |||||||||||||| ||||| |||||||||||||||||||| || | Sbjct: 1600 cagatacttctacattaggtgtaatctacgagcggggattaataggaatgtatcatgatt 1659 Query: 301 ggtgtgaagggttctctacttacccaaggacatatgacctcatacatgctaacggtgtct 360 |||||||||| || ||||| || |||||||||||||| |||||||||||||||| ||| | Sbjct: 1660 ggtgtgaaggattttctacatatccaaggacatatgatctcatacatgctaacgctgtgt 1719 Query: 361 tcagtttgtaccagaacaaatgtaaatttgaagatatactactggaaatggaccggatct 420 |||| || || |||| || ||||||||||||||||||||| |||||||||||||||||| Sbjct: 1720 tcagcttatatgagaataagtgtaaatttgaagatatactattggaaatggaccggatct 1779 Query: 421 tacgcccagagggcgcagtcataatccgtgacacgattgacgctcttgtaaaggtggaaa 480 |||| |||||||||||||| ||||||||||||| | |||| | ||||||||||||||| | Sbjct: 1780 tacgaccagagggcgcagttataatccgtgacaaggttgatgttcttgtaaaggtggaga 1839 Query: 481 aagtagccaatgccatgaggtgggagacaa 510 || |||| || |||||||||||| |||||| Sbjct: 1840 aaatagctaacgccatgaggtggcagacaa 1869
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 268 bits (135), Expect = 2e-68 Identities = 255/295 (86%) Strand = Plus / Plus Query: 1 agaggctcaatgcagtaccacctcggatagcccgtggttttgtatccgggttctcagttc 60 |||| |||||||||||||| || |||| ||| |||||||||| | ||||||||||| | Sbjct: 14833840 agagactcaatgcagtacctcccaggattacccatggttttgtacctgggttctcagtcc 14833899 Query: 61 aaacatatcaggacgacaataaactctggcagaaacatgttaatgcttacaagaaaacca 120 | ||||||| || ||||||||||| |||||||||||| |||| |||||||| || | || Sbjct: 14833900 agtcatatcaagatgacaataaactttggcagaaacatattaacgcttacaaaaagatca 14833959 Query: 121 atgacttgcttgatactggaaggtaccgcaacataatggacatgaatgcaggtcttggta 180 || ||||||||||||||||||| ||||| |||||||||||||||||||| || ||||||| Sbjct: 14833960 ataacttgcttgatactggaagataccgtaacataatggacatgaatgctggccttggta 14834019 Query: 181 gctttgctgctgtactggagtctccaaagctgtgggtcatgaatgtcgttccgttcattg 240 | |||||||||| | ||||||| | |||||||||||||||||||| ||||| ||||| Sbjct: 14834020 gttttgctgctgcattggagtccacgaagctgtgggtcatgaatgttgttccaaccattg 14834079 Query: 241 cagatactaatactttaggtgtaatctatgagcgaggattaataggaatgtatca 295 |||||||| ||| |||||||||||||| ||||| |||||||||||||||||||| Sbjct: 14834080 cagatacttctacattaggtgtaatctacgagcggggattaataggaatgtatca 14834134 Score = 163 bits (82), Expect = 7e-37 Identities = 118/130 (90%) Strand = Plus / Plus Query: 381 tgtaaatttgaagatatactactggaaatggaccggatcttacgcccagagggcgcagtc 440 ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| Sbjct: 14834763 tgtaaatttgaagatatactattggaaatggaccggatcttacgaccagagggcgcagtt 14834822 Query: 441 ataatccgtgacacgattgacgctcttgtaaaggtggaaaaagtagccaatgccatgagg 500 ||||||||||||| | |||| | ||||||||||||||| ||| |||| || ||||||||| Sbjct: 14834823 ataatccgtgacaaggttgatgttcttgtaaaggtggagaaaatagctaacgccatgagg 14834882 Query: 501 tgggagacaa 510 ||| |||||| Sbjct: 14834883 tggcagacaa 14834892 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 301 ggtgtgaagggttctctacttacccaaggacatatgacctcatacatgctaacggtgtct 360 |||||||||| || ||||| || |||||||||||||| |||||||||||||||| ||| | Sbjct: 14834596 ggtgtgaaggattttctacatatccaaggacatatgatctcatacatgctaacgctgtgt 14834655 Query: 361 tcag 364 |||| Sbjct: 14834656 tcag 14834659
>gb|AC084762.8| Oryza sativa chromosome 3 BAC OSJNBa0013O08 genomic sequence, complete sequence Length = 148021 Score = 268 bits (135), Expect = 2e-68 Identities = 255/295 (86%) Strand = Plus / Minus Query: 1 agaggctcaatgcagtaccacctcggatagcccgtggttttgtatccgggttctcagttc 60 |||| |||||||||||||| || |||| ||| |||||||||| | ||||||||||| | Sbjct: 98928 agagactcaatgcagtacctcccaggattacccatggttttgtacctgggttctcagtcc 98869 Query: 61 aaacatatcaggacgacaataaactctggcagaaacatgttaatgcttacaagaaaacca 120 | ||||||| || ||||||||||| |||||||||||| |||| |||||||| || | || Sbjct: 98868 agtcatatcaagatgacaataaactttggcagaaacatattaacgcttacaaaaagatca 98809 Query: 121 atgacttgcttgatactggaaggtaccgcaacataatggacatgaatgcaggtcttggta 180 || ||||||||||||||||||| ||||| |||||||||||||||||||| || ||||||| Sbjct: 98808 ataacttgcttgatactggaagataccgtaacataatggacatgaatgctggccttggta 98749 Query: 181 gctttgctgctgtactggagtctccaaagctgtgggtcatgaatgtcgttccgttcattg 240 | |||||||||| | ||||||| | |||||||||||||||||||| ||||| ||||| Sbjct: 98748 gttttgctgctgcattggagtccacgaagctgtgggtcatgaatgttgttccaaccattg 98689 Query: 241 cagatactaatactttaggtgtaatctatgagcgaggattaataggaatgtatca 295 |||||||| ||| |||||||||||||| ||||| |||||||||||||||||||| Sbjct: 98688 cagatacttctacattaggtgtaatctacgagcggggattaataggaatgtatca 98634 Score = 163 bits (82), Expect = 7e-37 Identities = 118/130 (90%) Strand = Plus / Minus Query: 381 tgtaaatttgaagatatactactggaaatggaccggatcttacgcccagagggcgcagtc 440 ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| Sbjct: 98005 tgtaaatttgaagatatactattggaaatggaccggatcttacgaccagagggcgcagtt 97946 Query: 441 ataatccgtgacacgattgacgctcttgtaaaggtggaaaaagtagccaatgccatgagg 500 ||||||||||||| | |||| | ||||||||||||||| ||| |||| || ||||||||| Sbjct: 97945 ataatccgtgacaaggttgatgttcttgtaaaggtggagaaaatagctaacgccatgagg 97886 Query: 501 tgggagacaa 510 ||| |||||| Sbjct: 97885 tggcagacaa 97876 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 301 ggtgtgaagggttctctacttacccaaggacatatgacctcatacatgctaacggtgtct 360 |||||||||| || ||||| || |||||||||||||| |||||||||||||||| ||| | Sbjct: 98172 ggtgtgaaggattttctacatatccaaggacatatgatctcatacatgctaacgctgtgt 98113 Query: 361 tcag 364 |||| Sbjct: 98112 tcag 98109
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 268 bits (135), Expect = 2e-68 Identities = 255/295 (86%) Strand = Plus / Plus Query: 1 agaggctcaatgcagtaccacctcggatagcccgtggttttgtatccgggttctcagttc 60 |||| |||||||||||||| || |||| ||| |||||||||| | ||||||||||| | Sbjct: 14828374 agagactcaatgcagtacctcccaggattacccatggttttgtacctgggttctcagtcc 14828433 Query: 61 aaacatatcaggacgacaataaactctggcagaaacatgttaatgcttacaagaaaacca 120 | ||||||| || ||||||||||| |||||||||||| |||| |||||||| || | || Sbjct: 14828434 agtcatatcaagatgacaataaactttggcagaaacatattaacgcttacaaaaagatca 14828493 Query: 121 atgacttgcttgatactggaaggtaccgcaacataatggacatgaatgcaggtcttggta 180 || ||||||||||||||||||| ||||| |||||||||||||||||||| || ||||||| Sbjct: 14828494 ataacttgcttgatactggaagataccgtaacataatggacatgaatgctggccttggta 14828553 Query: 181 gctttgctgctgtactggagtctccaaagctgtgggtcatgaatgtcgttccgttcattg 240 | |||||||||| | ||||||| | |||||||||||||||||||| ||||| ||||| Sbjct: 14828554 gttttgctgctgcattggagtccacgaagctgtgggtcatgaatgttgttccaaccattg 14828613 Query: 241 cagatactaatactttaggtgtaatctatgagcgaggattaataggaatgtatca 295 |||||||| ||| |||||||||||||| ||||| |||||||||||||||||||| Sbjct: 14828614 cagatacttctacattaggtgtaatctacgagcggggattaataggaatgtatca 14828668 Score = 163 bits (82), Expect = 7e-37 Identities = 118/130 (90%) Strand = Plus / Plus Query: 381 tgtaaatttgaagatatactactggaaatggaccggatcttacgcccagagggcgcagtc 440 ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| Sbjct: 14829297 tgtaaatttgaagatatactattggaaatggaccggatcttacgaccagagggcgcagtt 14829356 Query: 441 ataatccgtgacacgattgacgctcttgtaaaggtggaaaaagtagccaatgccatgagg 500 ||||||||||||| | |||| | ||||||||||||||| ||| |||| || ||||||||| Sbjct: 14829357 ataatccgtgacaaggttgatgttcttgtaaaggtggagaaaatagctaacgccatgagg 14829416 Query: 501 tgggagacaa 510 ||| |||||| Sbjct: 14829417 tggcagacaa 14829426 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 301 ggtgtgaagggttctctacttacccaaggacatatgacctcatacatgctaacggtgtct 360 |||||||||| || ||||| || |||||||||||||| |||||||||||||||| ||| | Sbjct: 14829130 ggtgtgaaggattttctacatatccaaggacatatgatctcatacatgctaacgctgtgt 14829189 Query: 361 tcag 364 |||| Sbjct: 14829190 tcag 14829193
>gb|AY107453.1| Zea mays PCO116376 mRNA sequence Length = 587 Score = 234 bits (118), Expect = 2e-58 Identities = 190/214 (88%) Strand = Plus / Plus Query: 297 gactggtgtgaagggttctctacttacccaaggacatatgacctcatacatgctaacggt 356 |||||||||||||||||||||||||| ||||||||||||||||| |||||| |||| || Sbjct: 15 gactggtgtgaagggttctctacttatccaaggacatatgaccttatacattctaatggc 74 Query: 357 gtcttcagtttgtaccagaacaaatgtaaatttgaagatatactactggaaatggaccgg 416 ||||||| |||||||| ||||||||| | |||||||||||||| |||||||||||| | Sbjct: 75 atcttcagcttgtaccaaaacaaatgtcagtttgaagatatactcctggaaatggacaga 134 Query: 417 atcttacgcccagagggcgcagtcataatccgtgacacgattgacgctcttgtaaaggtg 476 ||||||||||| ||||| ||||||||||| ||||||| | |||| | ||||||||| ||| Sbjct: 135 atcttacgcccggagggtgcagtcataattcgtgacaaggttgatgttcttgtaaaagtg 194 Query: 477 gaaaaagtagccaatgccatgaggtgggagacaa 510 || ||| |||||||||||||||||||| |||||| Sbjct: 195 gagaaaatagccaatgccatgaggtggaagacaa 228
>gb|AF220204.1|AF220204 Malus domestica unknown mRNA Length = 2375 Score = 105 bits (53), Expect = 1e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 267 tatgagcgaggattaataggaatgtatcacgactggtgtgaagggttctctacttaccca 326 |||||||||||||| || ||||| || || || ||||||||||| ||||||||||||||| Sbjct: 1727 tatgagcgaggattgattggaatctaccatgattggtgtgaaggtttctctacttaccca 1786 Query: 327 aggacatatgacctcatacatgctaacggtgtcttcagtttgtac 371 ||||||||||||||||| ||||| | ||||| |||||| ||||| Sbjct: 1787 aggacatatgacctcattcatgcccatggtgttttcagtatgtac 1831 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 138 ggaaggtaccgcaacataatggacatgaatgcaggtcttggtagctttgctgctgtactg 197 |||||||| |||||||| ||||| |||||||| ||| | ||| | |||||||||| | | Sbjct: 1598 ggaaggtatcgcaacattatggatatgaatgctggtttgggtggttttgctgctgcaatt 1657 Query: 198 gagtctccaaagctgtgggtcatgaatgt 226 || |||||||| |||||||||||||||| Sbjct: 1658 gaatctccaaaattgtgggtcatgaatgt 1686
>gb|BT013699.1| Lycopersicon esculentum clone 132541R, mRNA sequence Length = 2467 Score = 83.8 bits (42), Expect = 5e-13 Identities = 93/110 (84%) Strand = Plus / Plus Query: 285 ggaatgtatcacgactggtgtgaagggttctctacttacccaaggacatatgacctcata 344 ||||| ||||| ||||||||||||| ||||||||| ||||||||||| ||||| ||||| Sbjct: 1758 ggaatttatcatgactggtgtgaagcgttctctacatacccaaggacttatgatctcatt 1817 Query: 345 catgctaacggtgtcttcagtttgtaccagaacaaatgtaaatttgaaga 394 |||||| | ||| | |||||||| ||| || |||| || || |||||||| Sbjct: 1818 catgctcatggtcttttcagtttatacaaggacaagtgcaactttgaaga 1867
>ref|NM_179380.1| Arabidopsis thaliana unknown protein AT1G26850 transcript variant AT1G26850.3 mRNA, complete cds Length = 2301 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 129 cttgatactggaaggtaccgcaacataatggacatgaatgcaggtcttggtagctttgct 188 ||||| |||||||||||||| ||||| ||||||||||| ||||| ||||| | |||||| Sbjct: 1671 cttgacactggaaggtaccgtaacatcatggacatgaacgcagggtttggtggatttgct 1730 Query: 189 gctgtactggagtctccaaagctgtgggtcatgaatgtcgttcc 232 |||| || || || | |||||| ||||| |||||||| ||||| Sbjct: 1731 gctgctcttgaatcccaaaagctttgggttatgaatgttgttcc 1774
>ref|NM_102449.2| Arabidopsis thaliana unknown protein AT1G26850 transcript variant AT1G26850.1 mRNA, complete cds Length = 2420 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 129 cttgatactggaaggtaccgcaacataatggacatgaatgcaggtcttggtagctttgct 188 ||||| |||||||||||||| ||||| ||||||||||| ||||| ||||| | |||||| Sbjct: 1671 cttgacactggaaggtaccgtaacatcatggacatgaacgcagggtttggtggatttgct 1730 Query: 189 gctgtactggagtctccaaagctgtgggtcatgaatgtcgttcc 232 |||| || || || | |||||| ||||| |||||||| ||||| Sbjct: 1731 gctgctcttgaatcccaaaagctttgggttatgaatgttgttcc 1774 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 297 gactggtgtgaagggttctctacttacccaaggacatatgacct 340 ||||||||||| | |||||||| || ||||| ||||||||||| Sbjct: 1839 gactggtgtgaggctttctctacatatccaagaacatatgacct 1882
>ref|NM_179379.1| Arabidopsis thaliana unknown protein AT1G26850 transcript variant AT1G26850.2 mRNA, complete cds Length = 2361 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 129 cttgatactggaaggtaccgcaacataatggacatgaatgcaggtcttggtagctttgct 188 ||||| |||||||||||||| ||||| ||||||||||| ||||| ||||| | |||||| Sbjct: 1612 cttgacactggaaggtaccgtaacatcatggacatgaacgcagggtttggtggatttgct 1671 Query: 189 gctgtactggagtctccaaagctgtgggtcatgaatgtcgttcc 232 |||| || || || | |||||| ||||| |||||||| ||||| Sbjct: 1672 gctgctcttgaatcccaaaagctttgggttatgaatgttgttcc 1715 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 297 gactggtgtgaagggttctctacttacccaaggacatatgacct 340 ||||||||||| | |||||||| || ||||| ||||||||||| Sbjct: 1780 gactggtgtgaggctttctctacatatccaagaacatatgacct 1823
>gb|BT000640.1| Arabidopsis thaliana At1g26850/T2P11_4 mRNA, complete cds Length = 1851 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 129 cttgatactggaaggtaccgcaacataatggacatgaatgcaggtcttggtagctttgct 188 ||||| |||||||||||||| ||||| ||||||||||| ||||| ||||| | |||||| Sbjct: 1375 cttgacactggaaggtaccgtaacatcatggacatgaacgcagggtttggtggatttgct 1434 Query: 189 gctgtactggagtctccaaagctgtgggtcatgaatgtcgttcc 232 |||| || || || | |||||| ||||| |||||||| ||||| Sbjct: 1435 gctgctcttgaatcccaaaagctttgggttatgaatgttgttcc 1478 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 297 gactggtgtgaagggttctctacttacccaaggacatatgacct 340 ||||||||||| | |||||||| || ||||| ||||||||||| Sbjct: 1543 gactggtgtgaggctttctctacatatccaagaacatatgacct 1586
>gb|AY037230.1| Arabidopsis thaliana At1g26850/T2P11_4 mRNA, complete cds Length = 2296 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 129 cttgatactggaaggtaccgcaacataatggacatgaatgcaggtcttggtagctttgct 188 ||||| |||||||||||||| ||||| ||||||||||| ||||| ||||| | |||||| Sbjct: 1671 cttgacactggaaggtaccgtaacatcatggacatgaacgcagggtttggtggatttgct 1730 Query: 189 gctgtactggagtctccaaagctgtgggtcatgaatgtcgttcc 232 |||| || || || | |||||| ||||| |||||||| ||||| Sbjct: 1731 gctgctcttgaatcccaaaagctttgggttatgaatgttgttcc 1774 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 297 gactggtgtgaagggttctctacttacccaaggacatatgacct 340 ||||||||||| | |||||||| || ||||| ||||||||||| Sbjct: 1839 gactggtgtgaggctttctctacatatccaagaacatatgacct 1882
>gb|AC005508.1|AC005508 Arabidopsis thaliana chromosome I BAC T2P11 genomic sequence, complete sequence Length = 85372 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Minus Query: 129 cttgatactggaaggtaccgcaacataatggacatgaatgcaggtcttggtagctttgct 188 ||||| |||||||||||||| ||||| ||||||||||| ||||| ||||| | |||||| Sbjct: 9716 cttgacactggaaggtaccgtaacatcatggacatgaacgcagggtttggtggatttgct 9657 Query: 189 gctgtactggagtctccaaagctgtgggtcatgaatgtcgttcc 232 |||| || || || | |||||| ||||| |||||||| ||||| Sbjct: 9656 gctgctcttgaatcccaaaagctttgggttatgaatgttgttcc 9613
>gb|BT014452.1| Lycopersicon esculentum clone 133778R, mRNA sequence Length = 2259 Score = 69.9 bits (35), Expect = 8e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 297 gactggtgtgaagggttctctacttacccaaggacatatgacctcatacatgctaacggt 356 |||||||||||||| |||||||| ||||| || || |||||||| | |||||||| | Sbjct: 1602 gactggtgtgaaggcttctctacatacccgagaacgtatgaccttcttcatgctaatcgc 1661 Query: 357 gtcttcagtttgtaccagaacaaatgtaaatttgaagatatactactggaaatggaccg 415 | |||| | |||||||| |||| ||| ||||||||||||| || || ||||||||||| Sbjct: 1662 ttgttcactctgtaccaggacaagtgtgaatttgaagatattctcctagaaatggaccg 1720 Score = 48.1 bits (24), Expect = 0.029 Identities = 66/80 (82%) Strand = Plus / Plus Query: 144 taccgcaacataatggacatgaatgcaggtcttggtagctttgctgctgtactggagtct 203 |||| ||||||||||||||||||||| || ||||| | ||||| || | ||| || ||| Sbjct: 1452 taccacaacataatggacatgaatgccggacttggaggatttgcagcagcactagactct 1511 Query: 204 ccaaagctgtgggtcatgaa 223 || || |||||||| ||||| Sbjct: 1512 cctaaactgtgggtgatgaa 1531
>emb|BX828866.1|CNS0A2NL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL45ZD05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1334 Score = 69.9 bits (35), Expect = 8e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 264 atctatgagcgaggattaataggaatgtatcacgactggtgtgaagggttctctacttac 323 ||||||||||||||||| || |||| |||||| |||||||||||| | ||||||||| Sbjct: 856 atctatgagcgaggattgattggaacgtatcaaaactggtgtgaagcaatgtctacttac 915 Query: 324 ccaaggacata 334 ||||||||||| Sbjct: 916 ccaaggacata 926
>dbj|AK121243.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099B06, full insert sequence Length = 2310 Score = 69.9 bits (35), Expect = 8e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 297 gactggtgtgaagggttctctacttacccaaggacatatgacctcatacatgctaacggt 356 ||||||||||| | ||||| ||||||||||| ||||||||||||||||||| || ||| Sbjct: 1712 gactggtgtgaggcattctccacttacccaagaacatatgacctcatacatggcaatggt 1771 Query: 357 gtcttca 363 ||||||| Sbjct: 1772 gtcttca 1778
>gb|BT014522.1| Lycopersicon esculentum clone 133918F, mRNA sequence Length = 2199 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 291 tatcacgactggtgtgaagggttctctacttacccaaggacatatgacctcatacatgct 350 ||||| ||||||||||||| || ||||| ||||||||||||||||| ||||| |||||| Sbjct: 1559 tatcatgactggtgtgaagcattttctacatacccaaggacatatgatctcattcatgct 1618 Query: 351 aa 352 || Sbjct: 1619 aa 1620 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 135 actggaaggtaccgcaacataatggacatgaatgc 169 |||||||||||||||||||| |||||||||||||| Sbjct: 1403 actggaaggtaccgcaacattatggacatgaatgc 1437
>ref|NM_197822.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0095C07.16), mRNA Length = 2061 Score = 63.9 bits (32), Expect = 5e-07 Identities = 116/144 (80%) Strand = Plus / Plus Query: 300 tggtgtgaagggttctctacttacccaaggacatatgacctcatacatgctaacggtgtc 359 |||||||||| |||||||| || || |||||||| ||| | |||||||| || ||| || Sbjct: 1753 tggtgtgaagccttctctacatatcctaggacatacgacttgatacatgccaatggtctc 1812 Query: 360 ttcagtttgtaccagaacaaatgtaaatttgaagatatactactggaaatggaccggatc 419 ||||| || |||||||| || || || | ||||| || || ||||| ||||| |||| Sbjct: 1813 ttcagcttataccagaataagtgcaacatggaagacattcttctggagatggataggatt 1872 Query: 420 ttacgcccagagggcgcagtcata 443 ||||| || ||||||||||||||| Sbjct: 1873 ttacgtcctgagggcgcagtcata 1896
>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034P08, complete sequence Length = 173088 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 312 ttctctacttacccaaggacatatgacctcatacatgctaacggtgtcttca 363 ||||| ||||||||||| ||||||||||||||||||| || |||||||||| Sbjct: 63549 ttctccacttacccaagaacatatgacctcatacatggcaatggtgtcttca 63498
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 312 ttctctacttacccaaggacatatgacctcatacatgctaacggtgtcttca 363 ||||| ||||||||||| ||||||||||||||||||| || |||||||||| Sbjct: 22277749 ttctccacttacccaagaacatatgacctcatacatggcaatggtgtcttca 22277800 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 gatactaatactttaggtgt 262 |||||||||||||||||||| Sbjct: 13979901 gatactaatactttaggtgt 13979882
>dbj|AK072459.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121D12, full insert sequence Length = 2438 Score = 63.9 bits (32), Expect = 5e-07 Identities = 116/144 (80%) Strand = Plus / Plus Query: 300 tggtgtgaagggttctctacttacccaaggacatatgacctcatacatgctaacggtgtc 359 |||||||||| |||||||| || || |||||||| ||| | |||||||| || ||| || Sbjct: 1776 tggtgtgaagccttctctacatatcctaggacatacgacttgatacatgccaatggtctc 1835 Query: 360 ttcagtttgtaccagaacaaatgtaaatttgaagatatactactggaaatggaccggatc 419 ||||| || |||||||| || || || | ||||| || || ||||| ||||| |||| Sbjct: 1836 ttcagcttataccagaataagtgcaacatggaagacattcttctggagatggataggatt 1895 Query: 420 ttacgcccagagggcgcagtcata 443 ||||| || ||||||||||||||| Sbjct: 1896 ttacgtcctgagggcgcagtcata 1919
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 312 ttctctacttacccaaggacatatgacctcatacatgctaacggtgtcttca 363 ||||| ||||||||||| ||||||||||||||||||| || |||||||||| Sbjct: 22587660 ttctccacttacccaagaacatatgacctcatacatggcaatggtgtcttca 22587711 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 gatactaatactttaggtgt 262 |||||||||||||||||||| Sbjct: 14061903 gatactaatactttaggtgt 14061884
>ref|NM_116300.2| Arabidopsis thaliana unknown protein AT4G00750 mRNA, complete cds Length = 1954 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 264 atctatgagcgaggattaataggaatgtatcacgactggtgtgaagggttctctacttac 323 ||||||||||||||||| || |||| |||||| |||||||||||| | || |||||| Sbjct: 1604 atctatgagcgaggattgattggaacgtatcaaaactggtgtgaagcaatgtcaacttac 1663 Query: 324 ccaaggacata 334 ||||||||||| Sbjct: 1664 ccaaggacata 1674
>gb|AC151802.1| Solanum tuberosum chromosome 5 clone PGEC46 map MAP_LOC, complete sequence Length = 43509 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 135 actggaaggtaccgcaacataatggacatgaatgc 169 |||||||||||||||||||| |||||||||||||| Sbjct: 1981 actggaaggtaccgcaacattatggacatgaatgc 1947 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 301 ggtgtgaagggttctctacttacccaaggacatatgacctcatacatgcta 351 ||||||||| || ||||| ||||||||||||||||| ||||| ||||||| Sbjct: 993 ggtgtgaagcattttctacatacccaaggacatatgatctcattcatgcta 943
>gb|AC149291.1| Solanum demissum chromosome 5 clone PGEC568H16 map MAP_LOC, complete sequence Length = 146091 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 135 actggaaggtaccgcaacataatggacatgaatgc 169 |||||||||||||||||||| |||||||||||||| Sbjct: 100595 actggaaggtaccgcaacattatggacatgaatgc 100629 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Plus Query: 301 ggtgtgaagggttctctacttacccaaggacatatgacctcatacatgcta 351 ||||||||| || ||||| ||||||||||||||||| || || ||||||| Sbjct: 101590 ggtgtgaagcattttctacatacccaaggacatatgatcttattcatgcta 101640
>gb|AC149267.1| Solanum demissum chromosome 5 clone PGEC747E24 map MAP_LOC, complete sequence Length = 92340 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 135 actggaaggtaccgcaacataatggacatgaatgc 169 |||||||||||||||||||| |||||||||||||| Sbjct: 89201 actggaaggtaccgcaacattatggacatgaatgc 89167 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 301 ggtgtgaagggttctctacttacccaaggacatatgacctcatacatgcta 351 ||||||||| || ||||| ||||||||||||||||| ||||| ||||||| Sbjct: 88255 ggtgtgaagcattttctacatacccaaggacatatgatctcattcatgcta 88205
>gb|AC149287.1| Solanum demissum chromosome 5 clone PGEC568D21 map MAP_LOC, complete sequence Length = 119525 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 135 actggaaggtaccgcaacataatggacatgaatgc 169 |||||||||||||||||||| |||||||||||||| Sbjct: 2083 actggaaggtaccgcaacattatggacatgaatgc 2049 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 301 ggtgtgaagggttctctacttacccaaggacatatgacctcatacatgcta 351 ||||||||| || ||||| ||||||||||||||||| ||||| ||||||| Sbjct: 1137 ggtgtgaagcattttctacatacccaaggacatatgatctcattcatgcta 1087
>gb|AY730334.1| Solanum tuberosum strain P6/210 clone BAC BA122p13, complete sequence Length = 91226 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 135 actggaaggtaccgcaacataatggacatgaatgc 169 |||||||||||||||||||| |||||||||||||| Sbjct: 36478 actggaaggtaccgcaacattatggacatgaatgc 36444 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Minus Query: 301 ggtgtgaagggttctctacttacccaaggacatatgacctcatacatgcta 351 ||||||||| || ||||| ||||| ||||||||||| ||||| ||||||| Sbjct: 35483 ggtgtgaagcattttctacatacccgaggacatatgatctcattcatgcta 35433
>gb|AC144791.1| Solanum demissum chromosome 5 BAC PGEC668E02 genomic sequence, complete sequence Length = 142575 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 135 actggaaggtaccgcaacataatggacatgaatgc 169 |||||||||||||||||||| |||||||||||||| Sbjct: 43531 actggaaggtaccgcaacattatggacatgaatgc 43565 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 301 ggtgtgaagggttctctacttacccaaggacatatgacctcatacatgcta 351 ||||||||| || ||||| ||||||||||||||||| ||||| ||||||| Sbjct: 44502 ggtgtgaagcattttctacatacccaaggacatatgatctcattcatgcta 44552
>gb|BT000539.1| Arabidopsis thaliana unknown protein (At4g00750/F15P23_1) mRNA, complete cds Length = 453 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 264 atctatgagcgaggattaataggaatgtatcacgactggtgtgaagggttctctacttac 323 ||||||||||||||||| || |||| |||||| |||||||||||| | || |||||| Sbjct: 103 atctatgagcgaggattgattggaacgtatcaaaactggtgtgaagcaatgtcaacttac 162 Query: 324 ccaaggacata 334 ||||||||||| Sbjct: 163 ccaaggacata 173
>gb|AY058882.1| Arabidopsis thaliana AT4g00750/F15P23_1 mRNA, complete cds Length = 977 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 264 atctatgagcgaggattaataggaatgtatcacgactggtgtgaagggttctctacttac 323 ||||||||||||||||| || |||| |||||| |||||||||||| | || |||||| Sbjct: 459 atctatgagcgaggattgattggaacgtatcaaaactggtgtgaagcaatgtcaacttac 518 Query: 324 ccaaggacata 334 ||||||||||| Sbjct: 519 ccaaggacata 529
>gb|AC146568.11| Medicago truncatula clone mth2-101o18, complete sequence Length = 129921 Score = 60.0 bits (30), Expect = 8e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 301 ggtgtgaagggttctctacttacccaaggacatatgacctcatacatgctaacggtgtct 360 |||||||||| || || || || ||||| |||||||| ||||| |||||||| || ||| Sbjct: 4671 ggtgtgaaggcttttccacatatccaagaacatatgatctcattcatgctaatggcctct 4730 Query: 361 tcagtttgtaccag 374 |||||||||||||| Sbjct: 4731 tcagtttgtaccag 4744 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 408 atggaccggatcttacgcccagagggcgcagtcataatccgtgac 452 ||||| ||||| || || ||||| ||||| ||||||||||||||| Sbjct: 5515 atggatcggatattgcgaccagaaggcgctgtcataatccgtgac 5559
>emb|AJ810709.1| Poa pratensis mRNA for Ankyrin protein kinase-like (apk gene) Length = 2703 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 267 tatgagcgaggattaataggaatgtatcacgactggtgtgaagggttctctacttaccca 326 |||| ||||||||| || || || || || ||||||||||||| ||||||||||| ||| Sbjct: 1822 tatgggcgaggattgattggcatttaccatgactggtgtgaagctttctctacttatcca 1881 Query: 327 aggacatatgacctcatacatgcta 351 ||||| ||||| || || ||||||| Sbjct: 1882 aggacctatgatctgatccatgcta 1906 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 134 tactggaaggtaccgcaacataatggacatgaatgcagg 172 |||||| |||||| | ||||| ||||||||||||||||| Sbjct: 1689 tactggtaggtacagaaacatcatggacatgaatgcagg 1727
>dbj|AK102287.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089J21, full insert sequence Length = 2371 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 270 gagcgaggattaataggaatgtatcacgactggtgtgaagggttctctacttacccaagg 329 ||||||||||| || || || || ||||||||||| |||| ||||||||||||||||| Sbjct: 1758 gagcgaggattgattggcatataccacgactggtgcgaagctttctctacttacccaaga 1817 Query: 330 acatatga 337 || ||||| Sbjct: 1818 acgtatga 1825 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 135 actggaaggtaccgcaacataatggacatgaatgcaggtcttggtagctttgctgctg 192 |||||||| ||| | ||||| |||||||||||||||||| |||| | |||||||||| Sbjct: 1623 actggaagatacagaaacattatggacatgaatgcaggttttggaggatttgctgctg 1680
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 135 actggaaggtaccgcaacataatggacatgaatgcaggtcttggtagctttgctgctg 192 |||||||| ||| | ||||| |||||||||||||||||| |||| | |||||||||| Sbjct: 14815282 actggaagatacagaaacattatggacatgaatgcaggttttggaggatttgctgctg 14815339
>dbj|AP005636.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0707C02 Length = 163609 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 135 actggaaggtaccgcaacataatggacatgaatgcaggtcttggtagctttgctgctg 192 |||||||| ||| | ||||| |||||||||||||||||| |||| | |||||||||| Sbjct: 100671 actggaagatacagaaacattatggacatgaatgcaggttttggaggatttgctgctg 100728
>dbj|AP005784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0014G10 Length = 164147 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 135 actggaaggtaccgcaacataatggacatgaatgcaggtcttggtagctttgctgctg 192 |||||||| ||| | ||||| |||||||||||||||||| |||| | |||||||||| Sbjct: 23621 actggaagatacagaaacattatggacatgaatgcaggttttggaggatttgctgctg 23678
>ref|NM_117913.3| Arabidopsis thaliana unknown protein AT4G18030 mRNA, complete cds Length = 2345 Score = 48.1 bits (24), Expect = 0.029 Identities = 66/80 (82%) Strand = Plus / Plus Query: 291 tatcacgactggtgtgaagggttctctacttacccaaggacatatgacctcatacatgct 350 ||||| |||||||||||||| || || ||||| ||||| ||||| || |||| || ||| Sbjct: 1653 tatcatgactggtgtgaaggcttttcaacttatccaagaacatacgatttcattcacgct 1712 Query: 351 aacggtgtcttcagtttgta 370 | ||||||||||| ||||| Sbjct: 1713 agtggtgtcttcagcttgta 1732
>gb|AF410264.1|AF410264 Arabidopsis thaliana AT4g18030/T6K21_210 mRNA, complete cds Length = 2320 Score = 48.1 bits (24), Expect = 0.029 Identities = 66/80 (82%) Strand = Plus / Plus Query: 291 tatcacgactggtgtgaagggttctctacttacccaaggacatatgacctcatacatgct 350 ||||| |||||||||||||| || || ||||| ||||| ||||| || |||| || ||| Sbjct: 1656 tatcatgactggtgtgaaggcttttcaacttatccaagaacatacgatttcattcacgct 1715 Query: 351 aacggtgtcttcagtttgta 370 | ||||||||||| ||||| Sbjct: 1716 agtggtgtcttcagcttgta 1735
>emb|CR954198.2| Medicago truncatula chromosome 5 clone mte1-67f21, COMPLETE SEQUENCE Length = 101335 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 273 cgaggattaataggaatgtatcacgactggtg 304 ||||||||||||||||||||||| || ||||| Sbjct: 59944 cgaggattaataggaatgtatcatgattggtg 59975
>gb|BT001149.1| Arabidopsis thaliana At4g18030/T6K21_210 mRNA, complete cds Length = 1866 Score = 48.1 bits (24), Expect = 0.029 Identities = 66/80 (82%) Strand = Plus / Plus Query: 291 tatcacgactggtgtgaagggttctctacttacccaaggacatatgacctcatacatgct 350 ||||| |||||||||||||| || || ||||| ||||| ||||| || |||| || ||| Sbjct: 1522 tatcatgactggtgtgaaggcttttcaacttatccaagaacatacgatttcattcacgct 1581 Query: 351 aacggtgtcttcagtttgta 370 | ||||||||||| ||||| Sbjct: 1582 agtggtgtcttcagcttgta 1601
>ref|NM_117112.1| Arabidopsis thaliana unknown protein AT4G10440 mRNA, complete cds Length = 1902 Score = 46.1 bits (23), Expect = 0.11 Identities = 68/83 (81%) Strand = Plus / Plus Query: 255 ttaggtgtaatctatgagcgaggattaataggaatgtatcacgactggtgtgaagggttc 314 |||||||| ||||| || || ||||| ||||| | |||||| || ||||||||||| ||| Sbjct: 1525 ttaggtgtgatctacgaacgtggattgatagggacgtatcaagattggtgtgaaggattc 1584 Query: 315 tctacttacccaaggacatatga 337 || || || ||||| || ||||| Sbjct: 1585 tcaacgtatccaagaacttatga 1607
>emb|AL161517.2|ATCHRIV29 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 29 Length = 199861 Score = 46.1 bits (23), Expect = 0.11 Identities = 68/83 (81%) Strand = Plus / Minus Query: 255 ttaggtgtaatctatgagcgaggattaataggaatgtatcacgactggtgtgaagggttc 314 |||||||| ||||| || || ||||| ||||| | |||||| || ||||||||||| ||| Sbjct: 92415 ttaggtgtgatctacgaacgtggattgatagggacgtatcaagattggtgtgaaggattc 92356 Query: 315 tctacttacccaaggacatatga 337 || || || ||||| || ||||| Sbjct: 92355 tcaacgtatccaagaacttatga 92333
>emb|AL049524.1|ATF7L13 Arabidopsis thaliana DNA chromosome 4, BAC clone F7L13 (ESSA project) Length = 95076 Score = 46.1 bits (23), Expect = 0.11 Identities = 68/83 (81%) Strand = Plus / Minus Query: 255 ttaggtgtaatctatgagcgaggattaataggaatgtatcacgactggtgtgaagggttc 314 |||||||| ||||| || || ||||| ||||| | |||||| || ||||||||||| ||| Sbjct: 32452 ttaggtgtgatctacgaacgtggattgatagggacgtatcaagattggtgtgaaggattc 32393 Query: 315 tctacttacccaaggacatatga 337 || || || ||||| || ||||| Sbjct: 32392 tcaacgtatccaagaacttatga 32370
>ref|NM_129882.1| Arabidopsis thaliana unknown protein AT2G43200 mRNA, complete cds Length = 1836 Score = 44.1 bits (22), Expect = 0.45 Identities = 61/74 (82%) Strand = Plus / Plus Query: 298 actggtgtgaagggttctctacttacccaaggacatatgacctcatacatgctaacggtg 357 |||||||||||| || ||||| ||||| | || |||||||| || ||||| || |||| Sbjct: 1553 actggtgtgaagctttatctacataccctcgaacctatgacctgattcatgccaatggtg 1612 Query: 358 tcttcagtttgtac 371 | |||||||||||| Sbjct: 1613 tattcagtttgtac 1626
>ref|NM_113232.3| Arabidopsis thaliana unknown protein AT3G23300 mRNA, complete cds Length = 2212 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 299 ctggtgtgaagggttctctacttacccaaggac 331 ||||||||||| |||||| |||||||| ||||| Sbjct: 1647 ctggtgtgaagcgttctcgacttacccgaggac 1679
>ref|NM_103049.2| Arabidopsis thaliana unknown protein AT1G33170 mRNA, complete cds Length = 2240 Score = 42.1 bits (21), Expect = 1.8 Identities = 54/65 (83%) Strand = Plus / Plus Query: 255 ttaggtgtaatctatgagcgaggattaataggaatgtatcacgactggtgtgaagggttc 314 ||||| || |||| ||| |||||||| ||||| | ||||| || ||||||||||| ||| Sbjct: 1757 ttaggggttatctttgaacgaggatttatagggacttatcaagattggtgtgaaggattc 1816 Query: 315 tctac 319 ||||| Sbjct: 1817 tctac 1821 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 aacataatggacatgaatgca 170 ||||||||||||||||||||| Sbjct: 1652 aacataatggacatgaatgca 1672
>gb|AC149298.1| Populus trichocarpa clone Pop1-021H24, complete sequence Length = 146635 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 aacataatggacatgaatgca 170 ||||||||||||||||||||| Sbjct: 125529 aacataatggacatgaatgca 125549
>emb|CR378662.1| M.truncatula DNA sequence from clone MTH2-41N19 on chromosome 3, complete sequence Length = 119227 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 276 ggattaataggaatgtatcacgactggtgtgaa 308 |||||||||||||| ||||| || ||||||||| Sbjct: 118502 ggattaataggaatttatcatgattggtgtgaa 118534
>gb|BT000890.1| Arabidopsis thaliana clone C105366 unknown protein (At3g23300) mRNA, complete cds Length = 1162 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 299 ctggtgtgaagggttctctacttacccaaggac 331 ||||||||||| |||||| |||||||| ||||| Sbjct: 810 ctggtgtgaagcgttctcgacttacccgaggac 842
>emb|CR932961.2| Medicago truncatula chromosome 5 clone mth2-62c4, COMPLETE SEQUENCE Length = 119142 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 376 acaaatgtaaatttgaagata 396 ||||||||||||||||||||| Sbjct: 95229 acaaatgtaaatttgaagata 95249
>gb|AY035138.1| Arabidopsis thaliana unknown protein (At3g23300) mRNA, partial cds Length = 1205 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 299 ctggtgtgaagggttctctacttacccaaggac 331 ||||||||||| |||||| |||||||| ||||| Sbjct: 624 ctggtgtgaagcgttctcgacttacccgaggac 656
>gb|BT009665.1| Arabidopsis thaliana At1g33170 gene, complete cds Length = 1920 Score = 42.1 bits (21), Expect = 1.8 Identities = 54/65 (83%) Strand = Plus / Plus Query: 255 ttaggtgtaatctatgagcgaggattaataggaatgtatcacgactggtgtgaagggttc 314 ||||| || |||| ||| |||||||| ||||| | ||||| || ||||||||||| ||| Sbjct: 1579 ttaggggttatctttgaacgaggatttatagggacttatcaagattggtgtgaaggattc 1638 Query: 315 tctac 319 ||||| Sbjct: 1639 tctac 1643 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 aacataatggacatgaatgca 170 ||||||||||||||||||||| Sbjct: 1474 aacataatggacatgaatgca 1494
>gb|AY140083.1| Arabidopsis thaliana unknown protein (At1g33170) mRNA, complete cds Length = 2234 Score = 42.1 bits (21), Expect = 1.8 Identities = 54/65 (83%) Strand = Plus / Plus Query: 255 ttaggtgtaatctatgagcgaggattaataggaatgtatcacgactggtgtgaagggttc 314 ||||| || |||| ||| |||||||| ||||| | ||||| || ||||||||||| ||| Sbjct: 1756 ttaggggttatctttgaacgaggatttatagggacttatcaagattggtgtgaaggattc 1815 Query: 315 tctac 319 ||||| Sbjct: 1816 tctac 1820 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 aacataatggacatgaatgca 170 ||||||||||||||||||||| Sbjct: 1651 aacataatggacatgaatgca 1671
>gb|AC146752.24| Medicago truncatula clone mth2-62d4, complete sequence Length = 130134 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 318 acttacccaaggacatatgacctcatacatgct 350 ||||||||||| ||||||||| | ||||||||| Sbjct: 26665 acttacccaagaacatatgacttgatacatgct 26633
>emb|BX824598.1|CNS0A7DT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH59ZD03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2293 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 299 ctggtgtgaagggttctctacttacccaaggac 331 ||||||||||| |||||| |||||||| ||||| Sbjct: 1732 ctggtgtgaagcgttctcgacttacccgaggac 1764
>gb|AC027035.5|AC027035 Arabidopsis thaliana chromosome 1 BAC T16O9 genomic sequence, complete sequence Length = 81609 Score = 42.1 bits (21), Expect = 1.8 Identities = 54/65 (83%) Strand = Plus / Plus Query: 255 ttaggtgtaatctatgagcgaggattaataggaatgtatcacgactggtgtgaagggttc 314 ||||| || |||| ||| |||||||| ||||| | ||||| || ||||||||||| ||| Sbjct: 6114 ttaggggttatctttgaacgaggatttatagggacttatcaagattggtgtgaaggattc 6173 Query: 315 tctac 319 ||||| Sbjct: 6174 tctac 6178 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 aacataatggacatgaatgca 170 ||||||||||||||||||||| Sbjct: 6009 aacataatggacatgaatgca 6029
>gb|AC018462.4| Homo sapiens BAC clone RP11-270B14 from 2, complete sequence Length = 189326 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 465 cttgtaaaggtggaaaaagta 485 ||||||||||||||||||||| Sbjct: 109214 cttgtaaaggtggaaaaagta 109194
>gb|AY088720.1| Arabidopsis thaliana clone 93040 mRNA, complete sequence Length = 632 Score = 42.1 bits (21), Expect = 1.8 Identities = 54/65 (83%) Strand = Plus / Plus Query: 255 ttaggtgtaatctatgagcgaggattaataggaatgtatcacgactggtgtgaagggttc 314 ||||| || |||| ||| |||||||| ||||| | ||||| || ||||||||||| ||| Sbjct: 153 ttaggggttatctttgaacgaggatttatagggacttatcaagattggtgtgaaggattc 212 Query: 315 tctac 319 ||||| Sbjct: 213 tctac 217 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 aacataatggacatgaatgca 170 ||||||||||||||||||||| Sbjct: 48 aacataatggacatgaatgca 68
>gb|AC021045.2|AC021045 Arabidopsis thaliana chromosome I BAC T9L6 genomic sequence, complete sequence Length = 90632 Score = 42.1 bits (21), Expect = 1.8 Identities = 54/65 (83%) Strand = Plus / Plus Query: 255 ttaggtgtaatctatgagcgaggattaataggaatgtatcacgactggtgtgaagggttc 314 ||||| || |||| ||| |||||||| ||||| | ||||| || ||||||||||| ||| Sbjct: 62378 ttaggggttatctttgaacgaggatttatagggacttatcaagattggtgtgaaggattc 62437 Query: 315 tctac 319 ||||| Sbjct: 62438 tctac 62442 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 aacataatggacatgaatgca 170 ||||||||||||||||||||| Sbjct: 62273 aacataatggacatgaatgca 62293
>dbj|AP002379.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-463F4, complete sequence Length = 215986 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 363 agtttgtaccagaacaaatgtaaat 387 ||||||||||| ||||||||||||| Sbjct: 193580 agtttgtaccataacaaatgtaaat 193604
>emb|CT573027.7| M.truncatula DNA sequence from clone MTH2-40D16 on chromosome 3, complete sequence Length = 58256 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 276 ggattaataggaatgtatcacgactggtgtgaa 308 |||||||||||||| ||||| || ||||||||| Sbjct: 1275 ggattaataggaatttatcatgattggtgtgaa 1307
>ref|NM_117513.2| Arabidopsis thaliana unknown protein AT4G14360 transcript variant AT4G14360.1 mRNA, complete cds Length = 2408 Score = 40.1 bits (20), Expect = 7.0 Identities = 44/52 (84%) Strand = Plus / Plus Query: 299 ctggtgtgaagggttctctacttacccaaggacatatgacctcatacatgct 350 ||||||||||| ||||| || || |||||||||||||| ||| | |||||| Sbjct: 1878 ctggtgtgaagcattctcgacatatccaaggacatatgatctcctccatgct 1929
>ref|NM_001036562.1| Arabidopsis thaliana unknown protein AT4G14360 transcript variant AT4G14360.2 mRNA, complete cds Length = 2666 Score = 40.1 bits (20), Expect = 7.0 Identities = 44/52 (84%) Strand = Plus / Plus Query: 299 ctggtgtgaagggttctctacttacccaaggacatatgacctcatacatgct 350 ||||||||||| ||||| || || |||||||||||||| ||| | |||||| Sbjct: 1765 ctggtgtgaagcattctcgacatatccaaggacatatgatctcctccatgct 1816
>gb|AC146523.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0045D11 map near 50283S, complete sequence Length = 148306 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 gatactaatactttaggtgt 262 |||||||||||||||||||| Sbjct: 112738 gatactaatactttaggtgt 112719
>gb|AC165254.2| Mus musculus BAC clone RP23-285H4 from chromosome 13, complete sequence Length = 229672 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 cagatactaatactttaggt 260 |||||||||||||||||||| Sbjct: 148615 cagatactaatactttaggt 148596
>gb|AC116739.13| Mus musculus chromosome 17, clone RP23-435B24, complete sequence Length = 222382 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 186 gctgctgtactggagtctccaaag 209 |||||||| ||||||||||||||| Sbjct: 148723 gctgctgttctggagtctccaaag 148700
>emb|AL133378.16| Human DNA sequence from clone RP1-91B17 on chromosome 6q13-14.3 Contains part of the BAI3 gene for brain-specific angiogenesis inhibitor 3, complete sequence Length = 113826 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 ggaaaaagtagccaatgcca 495 |||||||||||||||||||| Sbjct: 45371 ggaaaaagtagccaatgcca 45352
>gb|AC104518.5| Mus Musculus Strain 129S6/SvEvTac chromosome 17 BAC, RP22-187D17, Complete Sequence, complete sequence Length = 163367 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 186 gctgctgtactggagtctccaaag 209 |||||||| ||||||||||||||| Sbjct: 67120 gctgctgttctggagtctccaaag 67143
>gb|AY091393.1| Arabidopsis thaliana putative ankyrin protein (At4g14360) mRNA, complete cds Length = 1858 Score = 40.1 bits (20), Expect = 7.0 Identities = 44/52 (84%) Strand = Plus / Plus Query: 299 ctggtgtgaagggttctctacttacccaaggacatatgacctcatacatgct 350 ||||||||||| ||||| || || |||||||||||||| ||| | |||||| Sbjct: 1506 ctggtgtgaagcattctcgacatatccaaggacatatgatctcctccatgct 1557
>gb|AY059747.1| Arabidopsis thaliana putative ankyrin protein (At4g14360) mRNA, complete cds Length = 2421 Score = 40.1 bits (20), Expect = 7.0 Identities = 44/52 (84%) Strand = Plus / Plus Query: 299 ctggtgtgaagggttctctacttacccaaggacatatgacctcatacatgct 350 ||||||||||| ||||| || || |||||||||||||| ||| | |||||| Sbjct: 1878 ctggtgtgaagcattctcgacatatccaaggacatatgatctcctccatgct 1929
>emb|AL161472.2|ATCHRIV2 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 2 Length = 197975 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 264 atctatgagcgaggattaataggaatgtatca 295 ||||||||||||||||| || |||| |||||| Sbjct: 123760 atctatgagcgaggattgattggaacgtatca 123791
>gb|AC093917.3| Homo sapiens BAC clone RP11-800K23 from 4, complete sequence Length = 207691 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 cttacaagaaaaccaatgac 125 |||||||||||||||||||| Sbjct: 114843 cttacaagaaaaccaatgac 114862
>gb|AC157995.2| Mus musculus BAC clone RP24-364K9 from chromosome 9, complete sequence Length = 181542 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 ggtgtcttcagtttgtacca 373 |||||||||||||||||||| Sbjct: 173432 ggtgtcttcagtttgtacca 173451
>gb|AC122716.2| Homo sapiens chromosome 5 clone RP11-567A12, complete sequence Length = 171057 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 tgctgctgtactggagtctc 204 |||||||||||||||||||| Sbjct: 23131 tgctgctgtactggagtctc 23112
>gb|AC110562.17| Mus musculus chromosome 17, clone RP23-268M4, complete sequence Length = 165190 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 186 gctgctgtactggagtctccaaag 209 |||||||| ||||||||||||||| Sbjct: 155502 gctgctgttctggagtctccaaag 155525
>emb|BX511298.10| Zebrafish DNA sequence from clone DKEY-210E13 in linkage group 4, complete sequence Length = 217817 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 100 ttaatgcttacaagaaaaccaatg 123 ||||||||||||| |||||||||| Sbjct: 4402 ttaatgcttacaataaaaccaatg 4425
>gb|AF128392.1|F15P23 Arabidopsis thaliana BAC F15P23 Length = 18756 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 264 atctatgagcgaggattaataggaatgtatca 295 ||||||||||||||||| || |||| |||||| Sbjct: 13936 atctatgagcgaggattgattggaacgtatca 13967
>emb|CT030709.6| Mouse DNA sequence from clone RP23-268C22 on chromosome 9, complete sequence Length = 206089 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 ggtgtcttcagtttgtacca 373 |||||||||||||||||||| Sbjct: 136480 ggtgtcttcagtttgtacca 136461 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,100,451 Number of Sequences: 3902068 Number of extensions: 4100451 Number of successful extensions: 68427 Number of sequences better than 10.0: 80 Number of HSP's better than 10.0 without gapping: 82 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 68118 Number of HSP's gapped (non-prelim): 305 length of query: 516 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 493 effective length of database: 17,143,297,704 effective search space: 8451645768072 effective search space used: 8451645768072 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)